Rmu_sc0001081.1_g000010

Auxin-induced protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001081.1
OG0000092
Physical Location & Seq
Forward (+)
27430 .. 30551
3122 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001081.1_g000010.1.cds

Sequence Viewer

Length: 867 bp
atgggtttccaattgccacgaatcgctagcacaaagacatcagctatcccgaaaggctgctttgcagtctatgttggaaagaaccagaagaaacgatttgtggttccattatcatatttgaaccaacctttgtttcaggatttgctgagtcaagctgaagaagaatttggataccatcatccaatgggcggtttgggcctgattttcttctctttgtttcctcttgttggggctgttgttttgctgtgttcggaggtggtatggacaggtttgtttgccgattctgatatggtggatgaactagtgtctatcggttgctggtggcgatgtgaggctgatcgtggtggtggtgtgataggcggtagcggcgatggccggggggcgccagatctgcggttttggcacgctgggaacgaggtccttcatttggatctcaactgcctaggtatgccttggttgaggcatagtggtcgtggtgcagatgggactaaggctgctgtggtgccgattttgtcttgccggcaatggaattggatggtgctcctccagtttcgggtctgggacaggggcaagagagtccggatctgggatccaggcggttggaatggcatggggcccctactcgctactggtactggatttgggacccaatgctatgatatcccaaaaggctactttgcggtctatgttggagagagccagaagaagcgatttttgattccaatatcatacttgaaccaaccttcatttatggttttgctgagtcaagctgaagaagaatttggatatgatcatcccatgggcggtatcacaatcccctgcagtgaagacaccttccttgatctcacttcccgcttaagtgtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Auxin_inducible

Protein Analysis

288

Amino Acids

31.91

Weight (kDa)

6.3

Isoelectric Point (pI)

31.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000092)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G21210 AT2G21210 AT3G20220 AT4G34780 AT4G38840
fragaria_vesca FvH4_2g10810 FvH4_2g10820 FvH4_2g10850 FvH4_2g10870 FvH4_3g13730 FvH4_5g22620 FvH4_5g22660 FvH4_5g22690 FvH4_5g22700 FvH4_5g22780 FvH4_5g22790 FvH4_5g22810 FvH4_5g22821 FvH4_5g22822 FvH4_5g24600 FvH4_5g24720
malus_domestica MD05G1051600.v1.1 MD05G1051700.v1.1 MD05G1051800.v1.1 MD05G1052000.v1.1 MD05G1052100.v1.1 MD05G1052200.v1.1 MD05G1052300.v1.1 MD05G1052400.v1.1 MD05G1113300.v1.1 MD10G1059200.v1.1 MD10G1059500.v1.1 MD10G1059600.v1.1 MD10G1059700.v1.1 MD10G1059800.v1.1 MD10G1060100.v1.1 MD10G1060200.v1.1 MD10G1060300.v1.1 MD10G1060400.v1.1 MD10G1060500.v1.1 MD10G1060600.v1.1 MD10G1060700.v1.1 MD10G1060800.v1.1 MD10G1060900.v1.1 MD10G1061000.v1.1 MD10G1061100.v1.1
prunus_persica Prupe.8G078600_v2.0.a1 Prupe.8G078700_v2.0.a1 Prupe.8G078900_v2.0.a1 Prupe.8G079000_v2.0.a1 Prupe.8G079100_v2.0.a1 Prupe.8G079200_v2.0.a1 Prupe.8G079400_v2.0.a1 Prupe.8G079500_v2.0.a1 Prupe.8G079600_v2.0.a1 Prupe.8G079700_v2.0.a1 Prupe.8G079900_v2.0.a1 Prupe.8G080000_v2.0.a1 Prupe.8G080100_v2.0.a1 Prupe.8G080200_v2.0.a1 Prupe.8G080300_v2.0.a1 Prupe.8G080500_v2.0.a1 Prupe.8G080600_v2.0.a1 Prupe.8G080700_v2.0.a1 Prupe.8G080800_v2.0.a1 Prupe.8G081000_v2.0.a1 Prupe.8G081100_v2.0.a1 Prupe.8G081300_v2.0.a1 Prupe.8G081500_v2.0.a1 Prupe.8G081700_v2.0.a1 Prupe.8G157700_v2.0.a1
pyrus_communis pycom05g04350 pycom05g04390 pycom05g04400 pycom05g04410 pycom10g04550 pycom10g04560 pycom10g04570 pycom10g04580 pycom10g04590 pycom10g04600 pycom10g04610 pycom10g04630 pycom10g04640 pycom10g04650 pycom10g04660 pycom10g04680 pycom10g10040
rosa_chinensis RchiOBHm_Chr0c32g0501561 RchiOBHm_Chr2g0124401 RchiOBHm_Chr2g0124451 RchiOBHm_Chr2g0124461 RchiOBHm_Chr2g0124531 RchiOBHm_Chr2g0124561 RchiOBHm_Chr3g0483671 RchiOBHm_Chr3g0483711 RchiOBHm_Chr5g0056801 RchiOBHm_Chr5g0056821 RchiOBHm_Chr5g0056831 RchiOBHm_Chr5g0056841 RchiOBHm_Chr5g0059921 RchiOBHm_Chr6g0268901 RchiOBHm_Chr6g0268941 RchiOBHm_Chr6g0268951 RchiOBHm_Chr6g0268961 RchiOBHm_Chr7g0210461 RchiOBHm_Chr7g0210481 RchiOBHm_Chr7g0210491 RchiOBHm_Chr7g0210511 RchiOBHm_Chr7g0210531 RchiOBHm_Chr7g0210621 RchiOBHm_Chr7g0210641 RchiOBHm_Chr7g0210651 RchiOBHm_Chr7g0210661 RchiOBHm_Chr7g0210711 RchiOBHm_Chr7g0210801 RchiOBHm_Chr7g0210831 RchiOBHm_Chr7g0210851 RchiOBHm_Chr7g0210871 RchiOBHm_Chr7g0210881 RchiOBHm_Chr7g0210891 RchiOBHm_Chr7g0211121 RchiOBHm_Chr7g0211131 RchiOBHm_Chr7g0211151 RchiOBHm_Chr7g0211501 RchiOBHm_Chr7g0211511
rosa_laevigata RLG00000003016 RLG00000003020 RLG00000003021 RLG00000003031 RLG00000003032 RLG00000003033 RLG00000003034 RLG00000003040 RLG00000003041 RLG00000018801 RLG00000035128 RLG00000035129
rosa_multiflora Rmu_co8425977.1_g000001 Rmu_sc0001081.1_g000010 Rmu_sc0001081.1_g000011 Rmu_sc0001303.1_g000001 Rmu_sc0001303.1_g000002 Rmu_sc0001303.1_g000004 Rmu_sc0001303.1_g000007 Rmu_sc0001460.1_g000030 Rmu_sc0001460.1_g000035 Rmu_sc0001460.1_g000041 Rmu_sc0001460.1_g000048 Rmu_sc0002755.1_g000005 Rmu_sc0002755.1_g000011 Rmu_sc0002755.1_g000017 Rmu_sc0002755.1_g000027 Rmu_sc0003765.1_g000020 Rmu_sc0003765.1_g000042 Rmu_sc0003765.1_g000043 Rmu_sc0003765.1_g000048 Rmu_sc0003765.1_g000057 Rmu_sc0003765.1_g000058 Rmu_sc0003807.1_g000013 Rmu_sc0003807.1_g000014 Rmu_sc0003807.1_g000015 Rmu_sc0003807.1_g000018 Rmu_sc0003907.1_g000001 Rmu_sc0005302.1_g000002 Rmu_sc0005302.1_g000003 Rmu_sc0005696.1_g000001 Rmu_sc0005844.1_g000001 Rmu_sc0005844.1_g000002 Rmu_sc0005844.1_g000003 Rmu_sc0008289.1_g000006 Rmu_sc0008289.1_g000008 Rmu_sc0008289.1_g000009 Rmu_sc0008289.1_g000014 Rmu_sc0010535.1_g000012 Rmu_sc0010535.1_g000013 Rmu_sc0010535.1_g000014 Rmu_sc0010535.1_g000015 Rmu_sc0011084.1_g000001 Rmu_sc0011691.1_g000001 Rmu_sc0017239.1_g000001 Rmu_sc0018437.1_g000009 Rmu_sc0018662.1_g000001 Rmu_sc0018662.1_g000003 Rmu_sc0020409.1_g000001 Rmu_sc0024576.1_g000001 Rmu_sc0034951.1_g000001
rosa_roxburghii Rroxscaffold_1G00023480 Rroxscaffold_1G00023490 Rroxscaffold_1G00023570 Rroxscaffold_2G00119860 Rroxscaffold_2G00119910 Rroxscaffold_3G00247990 Rroxscaffold_3G00248000 Rroxscaffold_3G00248010 Rroxscaffold_3G00248060 Rroxscaffold_3G00248070 Rroxscaffold_3G00248090 Rroxscaffold_3G00248100 Rroxscaffold_3G00248210 Rroxscaffold_3G00248230 Rroxscaffold_3G00248240 Rroxscaffold_3G00248270 Rroxscaffold_3G00248290
rosa_rugosa Rorug02G0251000.1 Rorug02G0251100 Rorug02G0251100 Rorug02G0251200 Rorug02G0251300 Rorug05G0302000 Rorug05G0302100 Rorug05G0302400 Rorug05G0302500 Rorug06G0043500 Rorug06G0043600 Rorug06G0043600 Rorug07G0121600 Rorug07G0121700 Rorug07G0121800 Rorug07G0121900 Rorug07G0122300 Rorug07G0122400 Rorug07G0122500 Rorug07G0122600 Rorug07G0122700 Rorug07G0122700 Rorug07G0123100 Rorug07G0123200 Rorug07G0123300 Rorug07G0123600 Rorug07G0123700 Rorug07G0124200 Rorug07G0124300 Rorug07G0124500 Rorug07G0124500 Rorug07G0124500 Rorug07G0124500 Rorug07G0124600 Rorug07G0124700
rosa_wichuraiana Rw0G021160 Rw0G021170 Rw2G024970 Rw2G024980 Rw2G025000 Rw2G025020 Rw2G025030 Rw2G025040 Rw2G025050 Rw3G023170 Rw3G023180 Rw5G034930 Rw5G034940 Rw5G034960 Rw5G035050 Rw5G035060 Rw5G035070 Rw6G014100 Rw6G014110 Rw6G014130 Rw6G014140 Rw6G014150 Rw7G021690 Rw7G021700 Rw7G021710 Rw7G021720 Rw7G021740 Rw7G021750 Rw7G021760 Rw7G021770 Rw7G021790 Rw7G021800 Rw7G021810 Rw7G021820 Rw7G021900 Rw7G021910 Rw7G021920 Rw7G021930 Rw7G021940 Rw7G021950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 382, 502
AccIII TCCGGA 1 cut(s) 579
AciI CCGC 8 cut(s) 189, 360, 366, 394, 597, 680, 804, 853
AclWI GGATC 4 cut(s) 438, 584, 590, 597
AcoI YGGCCR 1 cut(s) 373
AcsI RAATTY 2 cut(s) 164, 779
AcuI CTGAAG 2 cut(s) 177, 792
AcyI GRCGYC 1 cut(s) 383
AfaI GTAC 1 cut(s) 634
AfiI CCNNNNNNNGG 6 cut(s) 188, 227, 427, 553, 586, 803
AflII CTTAAG 1 cut(s) 856
AgsI TTSAA 2 cut(s) 121, 736
AhlI ACTAGT 1 cut(s) 301
AjnI CCWGG 1 cut(s) 592
AjuI GAANNNNNNNTTGG 6 cut(s) 117, 149, 150, 182, 765, 797
AluBI AGCT 3 cut(s) 44, 155, 770
AluI AGCT 3 cut(s) 44, 155, 770
Alw21I GWGCWC 1 cut(s) 543
AlwI GGATC 4 cut(s) 438, 584, 590, 597
Aor13HI TCCGGA 1 cut(s) 579
AoxI GGCC 3 cut(s) 196, 373, 614
ApaI GGGCCC 1 cut(s) 618
ApeKI GCWGC 2 cut(s) 57, 494
ApoI RAATTY 2 cut(s) 164, 779
AspA2I CCTAGG 1 cut(s) 442
AspLEI GCGC 1 cut(s) 385
AspS9I GGNCC 5 cut(s) 196, 418, 614, 615, 645
AsuC2I CCSGG 1 cut(s) 377
AsuNHI GCTAGC 1 cut(s) 26
AvaII GGWCC 2 cut(s) 418, 645
AvrII CCTAGG 1 cut(s) 442
BaeGI GKGCMC 1 cut(s) 618
BamHI GGATCC 1 cut(s) 589
BanI GGYRCC 2 cut(s) 382, 502
BanII GRGCYC 1 cut(s) 618
BbsI GAAGAC 1 cut(s) 834
Bbv12I GWGCWC 1 cut(s) 543
BbvI GCAGC 2 cut(s) 44, 481
BccI CCATC 4 cut(s) 183, 365, 476, 529
BcgI CGANNNNNNTGC 2 cut(s) 452, 486
BciT130I CCWGG 1 cut(s) 594
BciVI GTATCC 1 cut(s) 164
BclI TGATCA 1 cut(s) 790
BcnI CCSGG 1 cut(s) 377
BcuI ACTAGT 1 cut(s) 301
BfaI CTAG 3 cut(s) 27, 302, 443
BfmI CTRYAG 1 cut(s) 820
BfoI RGCGCY 1 cut(s) 386
BfrI CTTAAG 1 cut(s) 856
BfuI GTATCC 1 cut(s) 164
BglII AGATCT 1 cut(s) 388
BisI GCNGC 3 cut(s) 58, 367, 495
BlnI CCTAGG 1 cut(s) 442
BlsI GCNGC 3 cut(s) 59, 368, 496
Bme1390I CCNGG 2 cut(s) 377, 594
Bme18I GGWCC 2 cut(s) 418, 645
BmgT120I GGNCC 5 cut(s) 196, 418, 614, 615, 645
BmiI GGNNCC 9 cut(s) 105, 384, 504, 591, 615, 616, 617, 646, 647
BmrFI CCNGG 2 cut(s) 377, 594
BmtI GCTAGC 1 cut(s) 30
BpiI GAAGAC 1 cut(s) 834
BpmI CTGGAG 1 cut(s) 530
BpuMI CCSGG 1 cut(s) 377
BsaHI GRCGYC 1 cut(s) 383
BsaJI CCNNGG 4 cut(s) 376, 442, 452, 798
BsaWI WCCGGW 1 cut(s) 579
Bsc4I CCNNNNNNNGG 6 cut(s) 188, 227, 427, 553, 586, 803
Bse118I RCCGGY 1 cut(s) 519
Bse1I ACTGG 3 cut(s) 547, 634, 640
Bse3DI GCAATG 1 cut(s) 530
BseAI TCCGGA 1 cut(s) 579
BseBI CCWGG 1 cut(s) 594
BseDI CCNNGG 4 cut(s) 376, 442, 452, 798
BseGI GGATG 4 cut(s) 178, 301, 540, 793
BseLI CCNNNNNNNGG 6 cut(s) 188, 227, 427, 553, 586, 803
BseMI GCAATG 1 cut(s) 530
BseMII CTCAG 2 cut(s) 137, 752
BseNI ACTGG 3 cut(s) 547, 634, 640
BseRI GAGGAG 1 cut(s) 533
BseSI GKGCMC 1 cut(s) 618
BseXI GCAGC 2 cut(s) 44, 481
BseYI CCCAGC 1 cut(s) 407
BsgI GTGCAG 1 cut(s) 498
BshFI GGCC 3 cut(s) 198, 375, 616
BshNI GGYRCC 2 cut(s) 382, 502
BsiHKAI GWGCWC 1 cut(s) 543
BsiSI CCGG 3 cut(s) 376, 520, 580
BslFI GGGAC 3 cut(s) 499, 575, 658
BslI CCNNNNNNNGG 6 cut(s) 188, 227, 427, 553, 586, 803
BsmFI GGGAC 3 cut(s) 499, 575, 658
BsnI GGCC 3 cut(s) 198, 375, 616
Bsp120I GGGCCC 1 cut(s) 614
Bsp1286I GDGCHC 2 cut(s) 543, 618
Bsp13I TCCGGA 1 cut(s) 579
Bsp143I GATC 7 cut(s) 337, 388, 430, 582, 589, 790, 841
Bsp19I CCATGG 1 cut(s) 798
BspACI CCGC 8 cut(s) 189, 360, 366, 394, 597, 680, 804, 853
BspANI GGCC 3 cut(s) 198, 375, 616
BspCNI CTCAG 2 cut(s) 138, 753
BspEI TCCGGA 1 cut(s) 579
BspLI GGNNCC 9 cut(s) 105, 384, 504, 591, 615, 616, 617, 646, 647
BspMAI CTGCAG 1 cut(s) 824
BspOI GCTAGC 1 cut(s) 30
BspPI GGATC 4 cut(s) 438, 584, 590, 597
BspT107I GGYRCC 2 cut(s) 382, 502
BspTI CTTAAG 1 cut(s) 856
BsrDI GCAATG 1 cut(s) 530
BsrFI RCCGGY 1 cut(s) 519
BsrI ACTGG 3 cut(s) 547, 634, 640
BssAI RCCGGY 1 cut(s) 519
BssECI CCNNGG 4 cut(s) 376, 442, 452, 798
BssMI GATC 7 cut(s) 337, 388, 430, 582, 589, 790, 841
BssNI GRCGYC 1 cut(s) 383
BssT1I CCWWGG 3 cut(s) 442, 452, 798
Bst2UI CCWGG 1 cut(s) 594
BstACI GRCGYC 1 cut(s) 383
BstAFI CTTAAG 1 cut(s) 856
BstC8I GCNNGC 3 cut(s) 28, 405, 521
BstDEI CTNAG 3 cut(s) 146, 489, 761
BstDSI CCRYGG 1 cut(s) 798
BstF5I GGATG 4 cut(s) 178, 301, 540, 793
BstH2I RGCGCY 1 cut(s) 386
BstHHI GCGC 1 cut(s) 385
BstKTI GATC 7 cut(s) 340, 391, 433, 585, 592, 793, 844
BstMBI GATC 7 cut(s) 337, 388, 430, 582, 589, 790, 841
BstMWI GCNNNNNNNGC 5 cut(s) 195, 366, 372, 391, 400
BstNI CCWGG 1 cut(s) 594
BstSCI CCNGG 2 cut(s) 375, 592
BstSFI CTRYAG 1 cut(s) 820
BstSLI GKGCMC 1 cut(s) 618
BstV1I GCAGC 2 cut(s) 44, 481
BstV2I GAAGAC 1 cut(s) 834
BstX2I RGATCY 4 cut(s) 388, 430, 582, 589
BstXI CCANNNNNNTGG 1 cut(s) 600
BstYI RGATCY 4 cut(s) 388, 430, 582, 589
BsuI GTATCC 1 cut(s) 164
BsuRI GGCC 3 cut(s) 198, 375, 616
BtgI CCRYGG 1 cut(s) 798
BtgZI GCGATG 2 cut(s) 340, 384
BtsCI GGATG 4 cut(s) 178, 301, 540, 793
BtsI GCAGTG 1 cut(s) 829
BtsIMutI CAGTG 1 cut(s) 829
Cac8I GCNNGC 3 cut(s) 28, 405, 521
CfoI GCGC 1 cut(s) 385
Cfr10I RCCGGY 1 cut(s) 519
Cfr13I GGNCC 5 cut(s) 196, 418, 614, 615, 645
Csp6I GTAC 1 cut(s) 633
CviAII CATG 2 cut(s) 610, 799
CviQI GTAC 1 cut(s) 633
DdeI CTNAG 3 cut(s) 146, 489, 761
DinI GGCGCC 1 cut(s) 384
DpnI GATC 7 cut(s) 339, 390, 432, 584, 591, 792, 843
DpnII GATC 7 cut(s) 337, 388, 430, 582, 589, 790, 841
EaeI YGGCCR 1 cut(s) 373
Eco130I CCWWGG 3 cut(s) 442, 452, 798
Eco24I GRGCYC 1 cut(s) 618
Eco32I GATATC 1 cut(s) 661
Eco47I GGWCC 2 cut(s) 418, 645
Eco57I CTGAAG 2 cut(s) 177, 792
EcoO109I RGGNCCY 4 cut(s) 418, 614, 615, 645
EcoRII CCWGG 1 cut(s) 592
EcoRV GATATC 1 cut(s) 661
EcoT14I CCWWGG 3 cut(s) 442, 452, 798
EcoT38I GRGCYC 1 cut(s) 618
EgeI GGCGCC 1 cut(s) 384
EheI GGCGCC 1 cut(s) 384
ErhI CCWWGG 3 cut(s) 442, 452, 798
FaeI CATG 2 cut(s) 613, 802
FaqI GGGAC 3 cut(s) 499, 575, 658
FatI CATG 2 cut(s) 609, 798
FauI CCCGC 1 cut(s) 860
FbaI TGATCA 1 cut(s) 790
Fnu4HI GCNGC 3 cut(s) 58, 367, 495
FokI GGATG 4 cut(s) 165, 308, 547, 780
FriOI GRGCYC 1 cut(s) 618
Fsp4HI GCNGC 3 cut(s) 58, 367, 495
FspBI CTAG 3 cut(s) 27, 302, 443
GlaI GCGC 1 cut(s) 384
GluI GCNGC 3 cut(s) 58, 367, 495
GsaI CCCAGC 1 cut(s) 411
GsuI CTGGAG 1 cut(s) 530
HaeII RGCGCY 1 cut(s) 386
HaeIII GGCC 3 cut(s) 198, 375, 616
HapII CCGG 3 cut(s) 376, 520, 580
HhaI GCGC 1 cut(s) 385
Hin1I GRCGYC 1 cut(s) 383
Hin1II CATG 2 cut(s) 613, 802
Hin6I GCGC 1 cut(s) 383
HinP1I GCGC 1 cut(s) 383
HinfI GANTC 6 cut(s) 21, 148, 281, 576, 718, 763
HpaII CCGG 3 cut(s) 376, 520, 580
Hpy188I TCNGA 2 cut(s) 253, 286
Hpy188III TCNNGA 3 cut(s) 49, 137, 580
HpyAV CCTTC 3 cut(s) 431, 753, 844
HpyCH4V TGCA 3 cut(s) 65, 479, 822
HpyF10VI GCNNNNNNNGC 5 cut(s) 195, 366, 372, 391, 400
HpyF3I CTNAG 3 cut(s) 146, 489, 761
Hsp92I GRCGYC 1 cut(s) 383
Hsp92II CATG 2 cut(s) 613, 802
HspAI GCGC 1 cut(s) 383
KasI GGCGCC 1 cut(s) 382
KflI GGGWCCC 1 cut(s) 645
Kpn2I TCCGGA 1 cut(s) 579
KroI GCCGGC 1 cut(s) 519
KroNI GCCGGC 1 cut(s) 521
Ksp22I TGATCA 1 cut(s) 790
Kzo9I GATC 7 cut(s) 337, 388, 430, 582, 589, 790, 841
LmnI GCTCC 1 cut(s) 546
Lsp1109I GCAGC 2 cut(s) 44, 481
MaeI CTAG 3 cut(s) 27, 302, 443
MalI GATC 7 cut(s) 339, 390, 432, 584, 591, 792, 843
MboI GATC 7 cut(s) 337, 388, 430, 582, 589, 790, 841
MboII GAAGA 8 cut(s) 100, 170, 173, 199, 715, 785, 788, 839
MfeI CAATTG 1 cut(s) 11
MflI RGATCY 4 cut(s) 388, 430, 582, 589
MhlI GDGCHC 2 cut(s) 543, 618
MluCI AATT 4 cut(s) 11, 164, 529, 779
Mly113I GGCGCC 1 cut(s) 383
MlyI GAGTC 3 cut(s) 157, 585, 772
MmeI TCCRAC 3 cut(s) 55, 581, 670
MnlI CCTC 6 cut(s) 231, 247, 325, 409, 453, 554
MroI TCCGGA 1 cut(s) 579
MroNI GCCGGC 1 cut(s) 519
MseI TTAA 1 cut(s) 857
MspCI CTTAAG 1 cut(s) 856
MspI CCGG 3 cut(s) 376, 520, 580
MspR9I CCNGG 2 cut(s) 377, 594
MunI CAATTG 1 cut(s) 11
MvaI CCWGG 1 cut(s) 594
MwoI GCNNNNNNNGC 5 cut(s) 195, 366, 372, 391, 400
NaeI GCCGGC 1 cut(s) 521
NarI GGCGCC 1 cut(s) 383
NciI CCSGG 1 cut(s) 377
NcoI CCATGG 1 cut(s) 798
NdeII GATC 7 cut(s) 337, 388, 430, 582, 589, 790, 841
NgoMIV GCCGGC 1 cut(s) 519
NheI GCTAGC 1 cut(s) 26
NlaIII CATG 2 cut(s) 613, 802
NlaIV GGNNCC 9 cut(s) 105, 384, 504, 591, 615, 616, 617, 646, 647
PcsI WCGNNNNNNNCGW 1 cut(s) 411
PdiI GCCGGC 1 cut(s) 521
PfeI GAWTC 3 cut(s) 21, 281, 718
PkrI GCNGC 3 cut(s) 59, 368, 496
PleI GAGTC 3 cut(s) 156, 584, 771
PluTI GGCGCC 1 cut(s) 386
PpsI GAGTC 3 cut(s) 156, 584, 771
PpuMI RGGWCCY 2 cut(s) 418, 645
Psp5II RGGWCCY 2 cut(s) 418, 645
Psp6I CCWGG 1 cut(s) 592
PspFI CCCAGC 1 cut(s) 407
PspGI CCWGG 1 cut(s) 592
PspN4I GGNNCC 9 cut(s) 105, 384, 504, 591, 615, 616, 617, 646, 647
PspOMI GGGCCC 1 cut(s) 614
PspPI GGNCC 5 cut(s) 196, 418, 614, 615, 645
PspPPI RGGWCCY 2 cut(s) 418, 645
PstI CTGCAG 1 cut(s) 824
PsuI RGATCY 4 cut(s) 388, 430, 582, 589
RsaI GTAC 1 cut(s) 634
RsaNI GTAC 1 cut(s) 633
SaqAI TTAA 1 cut(s) 857
SatI GCNGC 3 cut(s) 58, 367, 495
Sau3AI GATC 7 cut(s) 337, 388, 430, 582, 589, 790, 841
Sau96I GGNCC 5 cut(s) 196, 418, 614, 615, 645
SchI GAGTC 3 cut(s) 157, 585, 772
ScrFI CCNGG 2 cut(s) 377, 594
SduI GDGCHC 2 cut(s) 543, 618
SfcI CTRYAG 1 cut(s) 820
SfoI GGCGCC 1 cut(s) 384
SinI GGWCC 2 cut(s) 418, 645
SmlI CTYRAG 1 cut(s) 856
SmoI CTYRAG 1 cut(s) 856
SpeI ACTAGT 1 cut(s) 301
Sse9I AATT 4 cut(s) 11, 164, 529, 779
SsiI CCGC 8 cut(s) 189, 360, 366, 394, 597, 680, 804, 853
SspDI GGCGCC 1 cut(s) 382
SspMI CTAG 3 cut(s) 27, 302, 443
StyD4I CCNGG 2 cut(s) 375, 592
StyI CCWWGG 3 cut(s) 442, 452, 798
TasI AATT 4 cut(s) 11, 164, 529, 779
TauI GCSGC 1 cut(s) 369
TfiI GAWTC 3 cut(s) 21, 281, 718
Tru1I TTAA 1 cut(s) 857
Tru9I TTAA 1 cut(s) 857
TscAI CASTG 1 cut(s) 829
TseI GCWGC 2 cut(s) 57, 494
TspDTI ATGAA 3 cut(s) 312, 413, 735
TspRI CASTG 1 cut(s) 829
Vha464I CTTAAG 1 cut(s) 856
VpaK11BI GGWCC 2 cut(s) 418, 645
XapI RAATTY 2 cut(s) 164, 779
XmaJI CCTAGG 1 cut(s) 442
XspI CTAG 3 cut(s) 27, 302, 443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.