Rorug07G0124600

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000092
Physical Location & Seq
Reverse (-)
9727147 .. 9731560
4414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0124600.1

Sequence Viewer

Length: 1347 bp
ATGGAAAGAGTTGCCGGACAGCGATCTAAGGAGCGATGTCATAGCTCTCATTTGAGCCTAGGGAATTTGCTTGTGCTGTCTCTGGCGCTCAATGTGAGCTTGATTATGAGGGCATTTTTCGATGGTGAGAAACAGGGCTTCTTCTCTGTGGAGCAGAGAGGTCCGTCAATGGCTGCAGACAAGGAAACTCACGCAACCCAGAGGACCCTTCTGTCAGTTTCTTCTTCGTCTGATAATGAAGACATGGAAAGAGTCATCAATCTCAACCACGGTGACCCGACTATGTACGAAAAGTACTGGATGATGATGGGTGAGAGAACCACATTTGTGATTCCTGGATGGCACTCCATGAGCTATTTCTCAGACGTTAAAAACCTCTGCTGGTTTCTGGAGCCCGAGTTTGCCAAGCAGGTTTTCAGACTACATAAATCGGTGGGCAACGCCGTCACTGAAGGCCGTCACATTGTGGTTGGGACAGGTTCATCTCAGCTCGTTTTAGCTGCACTTTTCGCTCTTTCTCCGAAAGATGGATCTGAGCCAATGAGTGTGGTATCTACAGCCCCATACTACTCGTCTTACCCCGTGATGGCAAACTACCTCAAGTCGGGCTTGTACAACTGGGCTGGAGATGCCCAAAGCTTCGATAAGGAGGGCCCTTACATCGAGTTGATCACCTCTCCGAACAACCCTGATGGATTCATCAGGCTGCCTACGGTGAATCGAACTGGAGGTATATTGGTCCATGATTTGGCTTACTACTGGCCCCAATATACCCCCATTTCCTCACCGGCAGATCATGATCTGACATTGTTCACCATCACAAAACTCACCGGTCATGCCGGGACGCGCATTGGGTGGGCTCTAGTGAAAGATCCAGAGGTTGCCAAGAAAATGGTCAAGTTCATAGAGCTCAACACCATTGGCGTCTGCAGGGTTTCACAGCTCCGAGCTGCCAAGATCTTGGAAGTACTGACCAACACCACTGAAAAACTTGGCAGGTCGGATTCTGGCGAATCCTTCTTTGAGATAAGCTACCACCTCATGGCAGAGAGGTGGCGACTGCTTCGAGCGGCGGTGAGCAATGGCAGTATGTTTAGTCTGCCTGAATTTGCACCAGGGTTCTGCCACTTCCTTCAACAGGAGACGCAGGCTCAACCTGCTTTCGCATGGCTCAAATGTGAAGACGATGCAGTGGAGGATTGCGAAAGCGTCCTGAGAGGGCACAAGATTTTGACCCGAGGAGGAAGACAGTTTGGGGTTTCCCCAAAGTATGTCCGAGTTAGCATGCTGGATAGGGACATTAACTTCAGTTTGTTTCTGAAGAGACTGTCCAAAATCCAGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

448

Amino Acids

50.26

Weight (kDa)

7.21

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Alliinase_C PF04864 86 - 446 2.1e-144 Allinase
Aminotran_1_2 PF00155 131 - 430 3.3e-12 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000092)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G21210 AT2G21210 AT3G20220 AT4G34780 AT4G38840
fragaria_vesca FvH4_2g10810 FvH4_2g10820 FvH4_2g10850 FvH4_2g10870 FvH4_3g13730 FvH4_5g22620 FvH4_5g22660 FvH4_5g22690 FvH4_5g22700 FvH4_5g22780 FvH4_5g22790 FvH4_5g22810 FvH4_5g22821 FvH4_5g22822 FvH4_5g24600 FvH4_5g24720
malus_domestica MD05G1051600.v1.1 MD05G1051700.v1.1 MD05G1051800.v1.1 MD05G1052000.v1.1 MD05G1052100.v1.1 MD05G1052200.v1.1 MD05G1052300.v1.1 MD05G1052400.v1.1 MD05G1113300.v1.1 MD10G1059200.v1.1 MD10G1059500.v1.1 MD10G1059600.v1.1 MD10G1059700.v1.1 MD10G1059800.v1.1 MD10G1060100.v1.1 MD10G1060200.v1.1 MD10G1060300.v1.1 MD10G1060400.v1.1 MD10G1060500.v1.1 MD10G1060600.v1.1 MD10G1060700.v1.1 MD10G1060800.v1.1 MD10G1060900.v1.1 MD10G1061000.v1.1 MD10G1061100.v1.1
prunus_persica Prupe.8G078600_v2.0.a1 Prupe.8G078700_v2.0.a1 Prupe.8G078900_v2.0.a1 Prupe.8G079000_v2.0.a1 Prupe.8G079100_v2.0.a1 Prupe.8G079200_v2.0.a1 Prupe.8G079400_v2.0.a1 Prupe.8G079500_v2.0.a1 Prupe.8G079600_v2.0.a1 Prupe.8G079700_v2.0.a1 Prupe.8G079900_v2.0.a1 Prupe.8G080000_v2.0.a1 Prupe.8G080100_v2.0.a1 Prupe.8G080200_v2.0.a1 Prupe.8G080300_v2.0.a1 Prupe.8G080500_v2.0.a1 Prupe.8G080600_v2.0.a1 Prupe.8G080700_v2.0.a1 Prupe.8G080800_v2.0.a1 Prupe.8G081000_v2.0.a1 Prupe.8G081100_v2.0.a1 Prupe.8G081300_v2.0.a1 Prupe.8G081500_v2.0.a1 Prupe.8G081700_v2.0.a1 Prupe.8G157700_v2.0.a1
pyrus_communis pycom05g04350 pycom05g04390 pycom05g04400 pycom05g04410 pycom10g04550 pycom10g04560 pycom10g04570 pycom10g04580 pycom10g04590 pycom10g04600 pycom10g04610 pycom10g04630 pycom10g04640 pycom10g04650 pycom10g04660 pycom10g04680 pycom10g10040
rosa_chinensis RchiOBHm_Chr0c32g0501561 RchiOBHm_Chr2g0124401 RchiOBHm_Chr2g0124451 RchiOBHm_Chr2g0124461 RchiOBHm_Chr2g0124531 RchiOBHm_Chr2g0124561 RchiOBHm_Chr3g0483671 RchiOBHm_Chr3g0483711 RchiOBHm_Chr5g0056801 RchiOBHm_Chr5g0056821 RchiOBHm_Chr5g0056831 RchiOBHm_Chr5g0056841 RchiOBHm_Chr5g0059921 RchiOBHm_Chr6g0268901 RchiOBHm_Chr6g0268941 RchiOBHm_Chr6g0268951 RchiOBHm_Chr6g0268961 RchiOBHm_Chr7g0210461 RchiOBHm_Chr7g0210481 RchiOBHm_Chr7g0210491 RchiOBHm_Chr7g0210511 RchiOBHm_Chr7g0210531 RchiOBHm_Chr7g0210621 RchiOBHm_Chr7g0210641 RchiOBHm_Chr7g0210651 RchiOBHm_Chr7g0210661 RchiOBHm_Chr7g0210711 RchiOBHm_Chr7g0210801 RchiOBHm_Chr7g0210831 RchiOBHm_Chr7g0210851 RchiOBHm_Chr7g0210871 RchiOBHm_Chr7g0210881 RchiOBHm_Chr7g0210891 RchiOBHm_Chr7g0211121 RchiOBHm_Chr7g0211131 RchiOBHm_Chr7g0211151 RchiOBHm_Chr7g0211501 RchiOBHm_Chr7g0211511
rosa_laevigata RLG00000003016 RLG00000003020 RLG00000003021 RLG00000003031 RLG00000003032 RLG00000003033 RLG00000003034 RLG00000003040 RLG00000003041 RLG00000018801 RLG00000035128 RLG00000035129
rosa_multiflora Rmu_co8425977.1_g000001 Rmu_sc0001081.1_g000010 Rmu_sc0001081.1_g000011 Rmu_sc0001303.1_g000001 Rmu_sc0001303.1_g000002 Rmu_sc0001303.1_g000004 Rmu_sc0001303.1_g000007 Rmu_sc0001460.1_g000030 Rmu_sc0001460.1_g000035 Rmu_sc0001460.1_g000041 Rmu_sc0001460.1_g000048 Rmu_sc0002755.1_g000005 Rmu_sc0002755.1_g000011 Rmu_sc0002755.1_g000017 Rmu_sc0002755.1_g000027 Rmu_sc0003765.1_g000020 Rmu_sc0003765.1_g000042 Rmu_sc0003765.1_g000043 Rmu_sc0003765.1_g000048 Rmu_sc0003765.1_g000057 Rmu_sc0003765.1_g000058 Rmu_sc0003807.1_g000013 Rmu_sc0003807.1_g000014 Rmu_sc0003807.1_g000015 Rmu_sc0003807.1_g000018 Rmu_sc0003907.1_g000001 Rmu_sc0005302.1_g000002 Rmu_sc0005302.1_g000003 Rmu_sc0005696.1_g000001 Rmu_sc0005844.1_g000001 Rmu_sc0005844.1_g000002 Rmu_sc0005844.1_g000003 Rmu_sc0008289.1_g000006 Rmu_sc0008289.1_g000008 Rmu_sc0008289.1_g000009 Rmu_sc0008289.1_g000014 Rmu_sc0010535.1_g000012 Rmu_sc0010535.1_g000013 Rmu_sc0010535.1_g000014 Rmu_sc0010535.1_g000015 Rmu_sc0011084.1_g000001 Rmu_sc0011691.1_g000001 Rmu_sc0017239.1_g000001 Rmu_sc0018437.1_g000009 Rmu_sc0018662.1_g000001 Rmu_sc0018662.1_g000003 Rmu_sc0020409.1_g000001 Rmu_sc0024576.1_g000001 Rmu_sc0034951.1_g000001
rosa_roxburghii Rroxscaffold_1G00023480 Rroxscaffold_1G00023490 Rroxscaffold_1G00023570 Rroxscaffold_2G00119860 Rroxscaffold_2G00119910 Rroxscaffold_3G00247990 Rroxscaffold_3G00248000 Rroxscaffold_3G00248010 Rroxscaffold_3G00248060 Rroxscaffold_3G00248070 Rroxscaffold_3G00248090 Rroxscaffold_3G00248100 Rroxscaffold_3G00248210 Rroxscaffold_3G00248230 Rroxscaffold_3G00248240 Rroxscaffold_3G00248270 Rroxscaffold_3G00248290
rosa_rugosa Rorug02G0251000.1 Rorug02G0251100 Rorug02G0251100 Rorug02G0251200 Rorug02G0251300 Rorug05G0302000 Rorug05G0302100 Rorug05G0302400 Rorug05G0302500 Rorug06G0043500 Rorug06G0043600 Rorug06G0043600 Rorug07G0121600 Rorug07G0121700 Rorug07G0121800 Rorug07G0121900 Rorug07G0122300 Rorug07G0122400 Rorug07G0122500 Rorug07G0122600 Rorug07G0122700 Rorug07G0122700 Rorug07G0123100 Rorug07G0123200 Rorug07G0123300 Rorug07G0123600 Rorug07G0123700 Rorug07G0124200 Rorug07G0124300 Rorug07G0124500 Rorug07G0124500 Rorug07G0124500 Rorug07G0124500 Rorug07G0124600 Rorug07G0124700
rosa_wichuraiana Rw0G021160 Rw0G021170 Rw2G024970 Rw2G024980 Rw2G025000 Rw2G025020 Rw2G025030 Rw2G025040 Rw2G025050 Rw3G023170 Rw3G023180 Rw5G034930 Rw5G034940 Rw5G034960 Rw5G035050 Rw5G035060 Rw5G035070 Rw6G014100 Rw6G014110 Rw6G014130 Rw6G014140 Rw6G014150 Rw7G021690 Rw7G021700 Rw7G021710 Rw7G021720 Rw7G021740 Rw7G021750 Rw7G021760 Rw7G021770 Rw7G021790 Rw7G021800 Rw7G021810 Rw7G021820 Rw7G021900 Rw7G021910 Rw7G021920 Rw7G021930 Rw7G021940 Rw7G021950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 211
Acc36I ACCTGC 3 cut(s) 400, 987, 1165
AccB7I CCANNNNNTGG 2 cut(s) 748, 1042
AccBSI CCGCTC 1 cut(s) 1070
AccII CGCG 1 cut(s) 847
AciI CCGC 2 cut(s) 1070, 1073
AclWI GGATC 2 cut(s) 538, 866
AcsI RAATTY 2 cut(s) 64, 1106
AcuI CTGAAG 3 cut(s) 471, 1291, 1340
AcyI GRCGYC 1 cut(s) 924
AdeI CACNNNGTG 1 cut(s) 466
AfaI GTAC 4 cut(s) 287, 296, 614, 969
AfiI CCNNNNNNNGG 6 cut(s) 527, 586, 604, 748, 1042, 1138
AgeI ACCGGT 1 cut(s) 830
AgsI TTSAA 1 cut(s) 1136
AjnI CCWGG 2 cut(s) 334, 1114
AjuI GAANNNNNNNTTGG 2 cut(s) 398, 430
AleI CACNNNNGTG 1 cut(s) 326
Alw21I GWGCWC 1 cut(s) 912
Alw26I GTCTC 3 cut(s) 84, 1136, 1318
AlwI GGATC 2 cut(s) 538, 866
Ama87I CYCGRG 2 cut(s) 395, 1236
AoxI GGCC 3 cut(s) 454, 652, 761
ApaI GGGCCC 1 cut(s) 656
ApeKI GCWGC 4 cut(s) 173, 500, 706, 950
ApoI RAATTY 2 cut(s) 64, 1106
AsiGI ACCGGT 1 cut(s) 830
AspA2I CCTAGG 1 cut(s) 58
AspLEI GCGC 2 cut(s) 88, 849
AspS9I GGNCC 6 cut(s) 161, 204, 652, 653, 739, 762
AsuC2I CCSGG 1 cut(s) 841
AsuHPI GGTGA 9 cut(s) 137, 284, 323, 664, 727, 777, 805, 820, 1087
AvaI CYCGRG 2 cut(s) 395, 1236
AvaII GGWCC 3 cut(s) 161, 204, 739
AvrII CCTAGG 1 cut(s) 58
BaeGI GKGCMC 2 cut(s) 656, 1224
BanII GRGCYC 4 cut(s) 396, 656, 862, 912
BbsI GAAGAC 3 cut(s) 246, 1188, 1252
Bbv12I GWGCWC 1 cut(s) 912
BbvI GCAGC 4 cut(s) 160, 487, 693, 937
BccI CCATC 7 cut(s) 116, 301, 333, 521, 580, 686, 824
BceAI ACGGC 2 cut(s) 428, 441
BciT130I CCWGG 2 cut(s) 336, 1116
BclI TGATCA 1 cut(s) 669
BcnI CCSGG 1 cut(s) 841
BcoDI GTCTC 3 cut(s) 84, 1136, 1318
BfaI CTAG 2 cut(s) 59, 863
BfmI CTRYAG 3 cut(s) 174, 555, 928
BfoI RGCGCY 1 cut(s) 89
BfuAI ACCTGC 3 cut(s) 400, 987, 1165
BglII AGATCT 1 cut(s) 957
BisI GCNGC 5 cut(s) 174, 501, 707, 951, 1071
BlnI CCTAGG 1 cut(s) 58
BlsI GCNGC 5 cut(s) 175, 502, 708, 952, 1072
BmcAI AGTACT 2 cut(s) 296, 969
Bme1390I CCNGG 3 cut(s) 336, 841, 1116
Bme18I GGWCC 3 cut(s) 161, 204, 739
BmeT110I CYCGRG 2 cut(s) 395, 1236
BmgT120I GGNCC 6 cut(s) 161, 204, 652, 653, 739, 762
BmiI GGNNCC 4 cut(s) 206, 393, 654, 764
BmrFI CCNGG 3 cut(s) 336, 841, 1116
BmrI ACTGGG 1 cut(s) 628
BmsI GCATC 2 cut(s) 619, 1177
BmuI ACTGGG 1 cut(s) 628
BpiI GAAGAC 3 cut(s) 246, 1188, 1252
BpmI CTGGAG 3 cut(s) 410, 645, 747
BpuEI CTTGAG 1 cut(s) 584
BpuMI CCSGG 1 cut(s) 841
BsaBI GATNNNNATC 1 cut(s) 798
BsaHI GRCGYC 1 cut(s) 924
BsaJI CCNNGG 4 cut(s) 58, 268, 1115, 1237
BsaWI WCCGGW 1 cut(s) 830
BsaXI ACNNNNNCTCC 2 cut(s) 383, 413
Bsc4I CCNNNNNNNGG 6 cut(s) 527, 586, 604, 748, 1042, 1138
Bse118I RCCGGY 2 cut(s) 787, 830
Bse1I ACTGG 5 cut(s) 302, 623, 730, 764, 1339
Bse3DI GCAATG 1 cut(s) 1087
Bse8I GATNNNNATC 1 cut(s) 798
BseBI CCWGG 2 cut(s) 336, 1116
BseDI CCNNGG 4 cut(s) 58, 268, 1115, 1237
BseGI GGATG 2 cut(s) 306, 344
BseJI GATNNNNATC 1 cut(s) 798
BseLI CCNNNNNNNGG 6 cut(s) 527, 586, 604, 748, 1042, 1138
BseMI GCAATG 1 cut(s) 1087
BseMII CTCAG 4 cut(s) 375, 500, 525, 1205
BseNI ACTGG 5 cut(s) 302, 623, 730, 764, 1339
BseRI GAGGAG 1 cut(s) 1254
BseSI GKGCMC 2 cut(s) 656, 1224
BseXI GCAGC 4 cut(s) 160, 487, 693, 937
BsgI GTGCAG 1 cut(s) 486
Bsh1236I CGCG 1 cut(s) 847
BshFI GGCC 3 cut(s) 456, 654, 763
BshTI ACCGGT 1 cut(s) 830
BsiHKAI GWGCWC 1 cut(s) 912
BsiHKCI CYCGRG 2 cut(s) 395, 1236
BsiSI CCGG 4 cut(s) 15, 788, 831, 840
BslFI GGGAC 3 cut(s) 487, 856, 1310
BslI CCNNNNNNNGG 6 cut(s) 527, 586, 604, 748, 1042, 1138
BsmAI GTCTC 3 cut(s) 84, 1136, 1318
BsmBI CGTCTC 1 cut(s) 1136
BsmFI GGGAC 3 cut(s) 487, 856, 1310
BsnI GGCC 3 cut(s) 456, 654, 763
BsoBI CYCGRG 2 cut(s) 395, 1236
Bsp120I GGGCCC 1 cut(s) 652
Bsp1286I GDGCHC 5 cut(s) 396, 656, 862, 912, 1224
Bsp1407I TGTACA 1 cut(s) 612
Bsp143I GATC 7 cut(s) 23, 530, 669, 793, 799, 871, 957
BspACI CCGC 2 cut(s) 1070, 1073
BspANI GGCC 3 cut(s) 456, 654, 763
BspCNI CTCAG 4 cut(s) 374, 499, 526, 1206
BspFNI CGCG 1 cut(s) 847
BspHI TCATGA 1 cut(s) 796
BspLI GGNNCC 4 cut(s) 206, 393, 654, 764
BspMAI CTGCAG 2 cut(s) 178, 932
BspMI ACCTGC 3 cut(s) 400, 987, 1165
BspPI GGATC 2 cut(s) 538, 866
BsrBI CCGCTC 1 cut(s) 1070
BsrDI GCAATG 1 cut(s) 1087
BsrFI RCCGGY 2 cut(s) 787, 830
BsrGI TGTACA 1 cut(s) 612
BsrI ACTGG 5 cut(s) 302, 623, 730, 764, 1339
BssAI RCCGGY 2 cut(s) 787, 830
BssECI CCNNGG 4 cut(s) 58, 268, 1115, 1237
BssMI GATC 7 cut(s) 23, 530, 669, 793, 799, 871, 957
BssNI GRCGYC 1 cut(s) 924
BssT1I CCWWGG 1 cut(s) 58
Bst2UI CCWGG 2 cut(s) 336, 1116
Bst4CI ACNGT 4 cut(s) 272, 715, 1251, 1329
Bst6I CTCTTC 1 cut(s) 1316
BstACI GRCGYC 1 cut(s) 924
BstAUI TGTACA 1 cut(s) 612
BstC8I GCNNGC 2 cut(s) 1149, 1286
BstDEI CTNAG 5 cut(s) 27, 361, 486, 534, 1214
BstDSI CCRYGG 1 cut(s) 268
BstEII GGTNACC 1 cut(s) 272
BstENI CCTNNNNNAGG 1 cut(s) 1136
BstF5I GGATG 2 cut(s) 306, 344
BstFNI CGCG 1 cut(s) 847
BstH2I RGCGCY 1 cut(s) 89
BstHHI GCGC 2 cut(s) 88, 849
BstKTI GATC 7 cut(s) 26, 533, 672, 796, 802, 874, 960
BstMAI GTCTC 3 cut(s) 84, 1136, 1318
BstMBI GATC 7 cut(s) 23, 530, 669, 793, 799, 871, 957
BstMWI GCNNNNNNNGC 3 cut(s) 509, 629, 1157
BstNI CCWGG 2 cut(s) 336, 1116
BstNSI RCATGY 1 cut(s) 1288
BstPI GGTNACC 1 cut(s) 272
BstSCI CCNGG 3 cut(s) 334, 839, 1114
BstSFI CTRYAG 3 cut(s) 174, 555, 928
BstSLI GKGCMC 2 cut(s) 656, 1224
BstUI CGCG 1 cut(s) 847
BstV1I GCAGC 4 cut(s) 160, 487, 693, 937
BstV2I GAAGAC 3 cut(s) 246, 1188, 1252
BstX2I RGATCY 3 cut(s) 530, 871, 957
BstXI CCANNNNNNTGG 2 cut(s) 892, 961
BstYI RGATCY 3 cut(s) 530, 871, 957
BsuRI GGCC 3 cut(s) 456, 654, 763
BtgI CCRYGG 1 cut(s) 268
BtgZI GCGATG 1 cut(s) 49
BtsCI GGATG 2 cut(s) 306, 344
BtsI GCAGTG 1 cut(s) 1197
BtsIMutI CAGTG 3 cut(s) 447, 981, 1197
BveI ACCTGC 3 cut(s) 400, 987, 1165
Cac8I GCNNGC 2 cut(s) 1149, 1286
CciI TCATGA 1 cut(s) 796
CfoI GCGC 2 cut(s) 88, 849
Cfr10I RCCGGY 2 cut(s) 787, 830
Cfr13I GGNCC 6 cut(s) 161, 204, 652, 653, 739, 762
CseI GACGC 4 cut(s) 853, 913, 1153, 1198
Csp6I GTAC 4 cut(s) 286, 295, 613, 968
CspAI ACCGGT 1 cut(s) 830
CspCI CAANNNNNGTGG 2 cut(s) 528, 563
CviAII CATG 8 cut(s) 244, 349, 743, 797, 836, 1042, 1167, 1285
CviQI GTAC 4 cut(s) 286, 295, 613, 968
DdeI CTNAG 5 cut(s) 27, 361, 486, 534, 1214
DpnI GATC 7 cut(s) 25, 532, 671, 795, 801, 873, 959
DpnII GATC 7 cut(s) 23, 530, 669, 793, 799, 871, 957
DraIII CACNNNGTG 1 cut(s) 466
DrdI GACNNNNNNGTC 1 cut(s) 211
DseDI GACNNNNNNGTC 1 cut(s) 211
Eam1104I CTCTTC 1 cut(s) 1316
EarI CTCTTC 1 cut(s) 1316
Ecl136II GAGCTC 1 cut(s) 910
Eco130I CCWWGG 1 cut(s) 58
Eco24I GRGCYC 4 cut(s) 396, 656, 862, 912
Eco47I GGWCC 3 cut(s) 161, 204, 739
Eco53kI GAGCTC 1 cut(s) 910
Eco57I CTGAAG 3 cut(s) 471, 1291, 1340
Eco88I CYCGRG 2 cut(s) 395, 1236
Eco91I GGTNACC 1 cut(s) 272
EcoICRI GAGCTC 1 cut(s) 910
EcoNI CCTNNNNNAGG 1 cut(s) 1136
EcoO109I RGGNCCY 3 cut(s) 204, 652, 653
EcoO65I GGTNACC 1 cut(s) 272
EcoRII CCWGG 2 cut(s) 334, 1114
EcoT14I CCWWGG 1 cut(s) 58
EcoT38I GRGCYC 4 cut(s) 396, 656, 862, 912
ErhI CCWWGG 1 cut(s) 58
Esp3I CGTCTC 1 cut(s) 1136
FaeI CATG 8 cut(s) 247, 352, 746, 800, 839, 1045, 1170, 1288
FalI AAGNNNNNCTT 2 cut(s) 593, 625
FaqI GGGAC 3 cut(s) 487, 856, 1310
FatI CATG 8 cut(s) 243, 348, 742, 796, 835, 1041, 1166, 1284
FbaI TGATCA 1 cut(s) 669
Fnu4HI GCNGC 5 cut(s) 174, 501, 707, 951, 1071
FokI GGATG 2 cut(s) 313, 351
FriOI GRGCYC 4 cut(s) 396, 656, 862, 912
Fsp4HI GCNGC 5 cut(s) 174, 501, 707, 951, 1071
FspBI CTAG 2 cut(s) 59, 863
GlaI GCGC 2 cut(s) 87, 848
GluI GCNGC 5 cut(s) 174, 501, 707, 951, 1071
GsuI CTGGAG 3 cut(s) 410, 645, 747
HaeII RGCGCY 1 cut(s) 89
HaeIII GGCC 3 cut(s) 456, 654, 763
HapII CCGG 4 cut(s) 15, 788, 831, 840
HgaI GACGC 4 cut(s) 853, 913, 1153, 1198
HhaI GCGC 2 cut(s) 88, 849
Hin1I GRCGYC 1 cut(s) 924
Hin1II CATG 8 cut(s) 247, 352, 746, 800, 839, 1045, 1170, 1288
Hin6I GCGC 2 cut(s) 86, 847
HinP1I GCGC 2 cut(s) 86, 847
HindIII AAGCTT 1 cut(s) 637
HinfI GANTC 6 cut(s) 252, 331, 696, 718, 1004, 1013
HpaII CCGG 4 cut(s) 15, 788, 831, 840
HphI GGTGA 9 cut(s) 137, 284, 323, 664, 727, 777, 805, 820, 1087
Hpy166II GTNNAC 1 cut(s) 813
Hpy188III TCNNGA 4 cut(s) 389, 797, 875, 1213
Hpy8I GTNNAC 1 cut(s) 813
HpyAV CCTTC 4 cut(s) 218, 446, 1027, 1142
HpyCH4III ACNGT 4 cut(s) 272, 715, 1251, 1329
HpyCH4IV ACGT 1 cut(s) 366
HpyCH4V TGCA 5 cut(s) 176, 503, 930, 1112, 1190
HpyF10VI GCNNNNNNNGC 3 cut(s) 509, 629, 1157
HpyF3I CTNAG 5 cut(s) 27, 361, 486, 534, 1214
HpySE526I ACGT 1 cut(s) 366
Hsp92I GRCGYC 1 cut(s) 924
Hsp92II CATG 8 cut(s) 247, 352, 746, 800, 839, 1045, 1170, 1288
HspAI GCGC 2 cut(s) 86, 847
Ksp22I TGATCA 1 cut(s) 669
Kzo9I GATC 7 cut(s) 23, 530, 669, 793, 799, 871, 957
LmnI GCTCC 4 cut(s) 31, 151, 391, 948
Lsp1109I GCAGC 4 cut(s) 160, 487, 693, 937
LweI GCATC 2 cut(s) 619, 1177
MaeI CTAG 2 cut(s) 59, 863
MaeII ACGT 1 cut(s) 366
MaeIII GTNAC 3 cut(s) 272, 445, 458
MalI GATC 7 cut(s) 25, 532, 671, 795, 801, 873, 959
MbiI CCGCTC 1 cut(s) 1070
MboI GATC 7 cut(s) 23, 530, 669, 793, 799, 871, 957
MboII GAAGA 7 cut(s) 133, 213, 216, 251, 1193, 1257, 1333
MflI RGATCY 3 cut(s) 530, 871, 957
MhlI GDGCHC 5 cut(s) 396, 656, 862, 912, 1224
MluCI AATT 2 cut(s) 64, 1106
MlyI GAGTC 1 cut(s) 261
MmeI TCCRAC 1 cut(s) 981
MseI TTAA 2 cut(s) 369, 1302
MslI CAYNNNNRTG 1 cut(s) 326
MspI CCGG 4 cut(s) 15, 788, 831, 840
MspR9I CCNGG 3 cut(s) 336, 841, 1116
MvaI CCWGG 2 cut(s) 336, 1116
MvnI CGCG 1 cut(s) 847
MwoI GCNNNNNNNGC 3 cut(s) 509, 629, 1157
NciI CCSGG 1 cut(s) 841
NdeII GATC 7 cut(s) 23, 530, 669, 793, 799, 871, 957
NlaIII CATG 8 cut(s) 247, 352, 746, 800, 839, 1045, 1170, 1288
NlaIV GGNNCC 4 cut(s) 206, 393, 654, 764
NmuCI GTSAC 3 cut(s) 272, 445, 458
NspI RCATGY 1 cut(s) 1288
OliI CACNNNNGTG 1 cut(s) 326
PaeI GCATGC 1 cut(s) 1288
PagI TCATGA 1 cut(s) 796
PfeI GAWTC 5 cut(s) 331, 696, 718, 1004, 1013
PflMI CCANNNNNTGG 2 cut(s) 748, 1042
PfoI TCCNGGA 1 cut(s) 334
PinAI ACCGGT 1 cut(s) 830
PkrI GCNGC 5 cut(s) 175, 502, 708, 952, 1072
PleI GAGTC 1 cut(s) 260
PpsI GAGTC 1 cut(s) 260
PpuMI RGGWCCY 1 cut(s) 204
Psp124BI GAGCTC 1 cut(s) 912
Psp5II RGGWCCY 1 cut(s) 204
Psp6I CCWGG 2 cut(s) 334, 1114
PspEI GGTNACC 1 cut(s) 272
PspGI CCWGG 2 cut(s) 334, 1114
PspN4I GGNNCC 4 cut(s) 206, 393, 654, 764
PspOMI GGGCCC 1 cut(s) 652
PspPI GGNCC 6 cut(s) 161, 204, 652, 653, 739, 762
PspPPI RGGWCCY 1 cut(s) 204
PstI CTGCAG 2 cut(s) 178, 932
PsuI RGATCY 3 cut(s) 530, 871, 957
RsaI GTAC 4 cut(s) 287, 296, 614, 969
RsaNI GTAC 4 cut(s) 286, 295, 613, 968
RseI CAYNNNNRTG 1 cut(s) 326
SacI GAGCTC 1 cut(s) 912
SaqAI TTAA 2 cut(s) 369, 1302
SatI GCNGC 5 cut(s) 174, 501, 707, 951, 1071
Sau3AI GATC 7 cut(s) 23, 530, 669, 793, 799, 871, 957
Sau96I GGNCC 6 cut(s) 161, 204, 652, 653, 739, 762
ScaI AGTACT 2 cut(s) 296, 969
SchI GAGTC 1 cut(s) 261
ScrFI CCNGG 3 cut(s) 336, 841, 1116
SduI GDGCHC 5 cut(s) 396, 656, 862, 912, 1224
SfaNI GCATC 2 cut(s) 619, 1177
SfcI CTRYAG 3 cut(s) 174, 555, 928
SinI GGWCC 3 cut(s) 161, 204, 739
SmiMI CAYNNNNRTG 1 cut(s) 326
SmlI CTYRAG 1 cut(s) 599
SmoI CTYRAG 1 cut(s) 599
SphI GCATGC 1 cut(s) 1288
Sse9I AATT 2 cut(s) 64, 1106
SsiI CCGC 2 cut(s) 1070, 1073
SspMI CTAG 2 cut(s) 59, 863
SstI GAGCTC 1 cut(s) 912
StyD4I CCNGG 3 cut(s) 334, 839, 1114
StyI CCWWGG 1 cut(s) 58
TaaI ACNGT 4 cut(s) 272, 715, 1251, 1329
TaiI ACGT 1 cut(s) 369
TaqI TCGA 5 cut(s) 120, 642, 663, 721, 1066
TasI AATT 2 cut(s) 64, 1106
TatI WGTACW 3 cut(s) 294, 612, 967
TauI GCSGC 1 cut(s) 1073
TfiI GAWTC 5 cut(s) 331, 696, 718, 1004, 1013
Tru1I TTAA 2 cut(s) 369, 1302
Tru9I TTAA 2 cut(s) 369, 1302
TscAI CASTG 3 cut(s) 454, 988, 1197
TseFI GTSAC 3 cut(s) 272, 445, 458
TseI GCWGC 4 cut(s) 173, 500, 706, 950
Tsp45I GTSAC 3 cut(s) 272, 445, 458
TspDTI ATGAA 4 cut(s) 252, 471, 688, 892
TspGWI ACGGA 1 cut(s) 153
TspRI CASTG 3 cut(s) 454, 988, 1197
Van91I CCANNNNNTGG 2 cut(s) 748, 1042
VpaK11BI GGWCC 3 cut(s) 161, 204, 739
XagI CCTNNNNNAGG 1 cut(s) 1136
XapI RAATTY 2 cut(s) 64, 1106
XceI RCATGY 1 cut(s) 1288
XmaJI CCTAGG 1 cut(s) 58
XspI CTAG 2 cut(s) 59, 863
ZrmI AGTACT 2 cut(s) 296, 969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.