Histone-like transcription factor (CBF/NF-Y) and archaeal histone
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 392 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 188, 448 |
| AciI | CCGC | 1 cut(s) | 238 |
| AclWI | GGATC | 2 cut(s) | 360, 475 |
| AcoI | YGGCCR | 1 cut(s) | 585 |
| AcsI | RAATTY | 1 cut(s) | 164 |
| AcuI | CTGAAG | 2 cut(s) | 177, 660 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 64, 188, 448 |
| AgsI | TTSAA | 2 cut(s) | 121, 565 |
| AjnI | CCWGG | 2 cut(s) | 391, 587 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 117, 149 |
| AluBI | AGCT | 2 cut(s) | 155, 644 |
| AluI | AGCT | 2 cut(s) | 155, 644 |
| AlwI | GGATC | 2 cut(s) | 360, 475 |
| Ama87I | CYCGRG | 1 cut(s) | 321 |
| AoxI | GGCC | 2 cut(s) | 55, 585 |
| ApoI | RAATTY | 1 cut(s) | 164 |
| AvaI | CYCGRG | 1 cut(s) | 321 |
| BalI | TGGCCA | 1 cut(s) | 587 |
| BccI | CCATC | 4 cut(s) | 183, 343, 442, 622 |
| BciT130I | CCWGG | 2 cut(s) | 393, 589 |
| BciVI | GTATCC | 1 cut(s) | 164 |
| BfaI | CTAG | 1 cut(s) | 438 |
| BfmI | CTRYAG | 1 cut(s) | 500 |
| BfuAI | ACCTGC | 1 cut(s) | 392 |
| BfuI | GTATCC | 1 cut(s) | 164 |
| Bme1390I | CCNGG | 2 cut(s) | 393, 589 |
| BmeT110I | CYCGRG | 1 cut(s) | 321 |
| BmiI | GGNNCC | 1 cut(s) | 105 |
| BmrFI | CCNGG | 2 cut(s) | 393, 589 |
| BmsI | GCATC | 1 cut(s) | 379 |
| BsaJI | CCNNGG | 2 cut(s) | 241, 391 |
| BsaWI | WCCGGW | 1 cut(s) | 646 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 64, 188, 448 |
| Bse1I | ACTGG | 1 cut(s) | 469 |
| BseBI | CCWGG | 2 cut(s) | 393, 589 |
| BseDI | CCNNGG | 2 cut(s) | 241, 391 |
| BseGI | GGATG | 6 cut(s) | 178, 354, 370, 474, 625, 633 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 64, 188, 448 |
| BseMII | CTCAG | 1 cut(s) | 137 |
| BseNI | ACTGG | 1 cut(s) | 469 |
| BsgI | GTGCAG | 1 cut(s) | 420 |
| BshFI | GGCC | 2 cut(s) | 57, 587 |
| BsiHKCI | CYCGRG | 1 cut(s) | 321 |
| BsiSI | CCGG | 1 cut(s) | 647 |
| BslFI | GGGAC | 2 cut(s) | 374, 465 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 64, 188, 448 |
| BsmFI | GGGAC | 2 cut(s) | 374, 465 |
| BsmI | GAATGC | 1 cut(s) | 613 |
| BsnI | GGCC | 2 cut(s) | 57, 587 |
| BsoBI | CYCGRG | 1 cut(s) | 321 |
| Bsp143I | GATC | 2 cut(s) | 352, 467 |
| BspACI | CCGC | 1 cut(s) | 238 |
| BspANI | GGCC | 2 cut(s) | 57, 587 |
| BspCNI | CTCAG | 1 cut(s) | 138 |
| BspLI | GGNNCC | 1 cut(s) | 105 |
| BspMI | ACCTGC | 1 cut(s) | 392 |
| BspPI | GGATC | 2 cut(s) | 360, 475 |
| BsrI | ACTGG | 1 cut(s) | 469 |
| BssECI | CCNNGG | 2 cut(s) | 241, 391 |
| BssMI | GATC | 2 cut(s) | 352, 467 |
| BssT1I | CCWWGG | 1 cut(s) | 241 |
| Bst2UI | CCWGG | 2 cut(s) | 393, 589 |
| Bst4CI | ACNGT | 1 cut(s) | 572 |
| BstC8I | GCNNGC | 1 cut(s) | 552 |
| BstDEI | CTNAG | 1 cut(s) | 146 |
| BstF5I | GGATG | 6 cut(s) | 178, 354, 370, 474, 625, 633 |
| BstKTI | GATC | 2 cut(s) | 355, 470 |
| BstMBI | GATC | 2 cut(s) | 352, 467 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 502 |
| BstNI | CCWGG | 2 cut(s) | 393, 589 |
| BstSCI | CCNGG | 2 cut(s) | 391, 587 |
| BstSFI | CTRYAG | 1 cut(s) | 500 |
| BsuI | GTATCC | 1 cut(s) | 164 |
| BsuRI | GGCC | 2 cut(s) | 57, 587 |
| BtsCI | GGATG | 6 cut(s) | 178, 354, 370, 474, 625, 633 |
| BveI | ACCTGC | 1 cut(s) | 392 |
| Cac8I | GCNNGC | 1 cut(s) | 552 |
| CviAII | CATG | 1 cut(s) | 365 |
| CviJI | RGCY | 8 cut(s) | 57, 84, 155, 436, 441, 554, 587, 644 |
| CviKI_1 | RGCY | 8 cut(s) | 57, 84, 155, 436, 441, 554, 587, 644 |
| DdeI | CTNAG | 1 cut(s) | 146 |
| DpnI | GATC | 2 cut(s) | 354, 469 |
| DpnII | GATC | 2 cut(s) | 352, 467 |
| EaeI | YGGCCR | 1 cut(s) | 585 |
| EciI | GGCGGA | 1 cut(s) | 227 |
| Eco130I | CCWWGG | 1 cut(s) | 241 |
| Eco32I | GATATC | 1 cut(s) | 46 |
| Eco57I | CTGAAG | 2 cut(s) | 177, 660 |
| Eco88I | CYCGRG | 1 cut(s) | 321 |
| EcoRI | GAATTC | 1 cut(s) | 164 |
| EcoRII | CCWGG | 2 cut(s) | 391, 587 |
| EcoRV | GATATC | 1 cut(s) | 46 |
| EcoT14I | CCWWGG | 1 cut(s) | 241 |
| ErhI | CCWWGG | 1 cut(s) | 241 |
| FaeI | CATG | 1 cut(s) | 368 |
| FaiI | YATR | 9 cut(s) | 70, 72, 115, 366, 415, 417, 430, 605, 653 |
| FaqI | GGGAC | 2 cut(s) | 374, 465 |
| FatI | CATG | 1 cut(s) | 364 |
| FauNDI | CATATG | 1 cut(s) | 415 |
| FokI | GGATG | 6 cut(s) | 165, 357, 361, 461, 632, 640 |
| FspBI | CTAG | 1 cut(s) | 438 |
| HaeIII | GGCC | 2 cut(s) | 57, 587 |
| HapII | CCGG | 1 cut(s) | 647 |
| Hin1II | CATG | 1 cut(s) | 368 |
| HinfI | GANTC | 3 cut(s) | 148, 387, 453 |
| HpaII | CCGG | 1 cut(s) | 647 |
| Hpy166II | GTNNAC | 2 cut(s) | 424, 578 |
| Hpy188I | TCNGA | 3 cut(s) | 11, 170, 273 |
| Hpy188III | TCNNGA | 4 cut(s) | 137, 212, 539, 565 |
| Hpy8I | GTNNAC | 2 cut(s) | 424, 578 |
| HpyAV | CCTTC | 2 cut(s) | 138, 229 |
| HpyCH4III | ACNGT | 1 cut(s) | 572 |
| HpyCH4V | TGCA | 2 cut(s) | 207, 401 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 502 |
| HpyF3I | CTNAG | 1 cut(s) | 146 |
| Hsp92II | CATG | 1 cut(s) | 368 |
| Kzo9I | GATC | 2 cut(s) | 352, 467 |
| LmnI | GCTCC | 1 cut(s) | 649 |
| LweI | GCATC | 1 cut(s) | 379 |
| MaeI | CTAG | 1 cut(s) | 438 |
| MaeIII | GTNAC | 1 cut(s) | 229 |
| MalI | GATC | 2 cut(s) | 354, 469 |
| MboI | GATC | 2 cut(s) | 352, 467 |
| MboII | GAAGA | 4 cut(s) | 100, 170, 173, 610 |
| MlsI | TGGCCA | 1 cut(s) | 587 |
| MluCI | AATT | 6 cut(s) | 21, 164, 198, 249, 543, 655 |
| MluNI | TGGCCA | 1 cut(s) | 587 |
| MlyI | GAGTC | 3 cut(s) | 157, 396, 447 |
| MmeI | TCCRAC | 3 cut(s) | 55, 398, 485 |
| MnlI | CCTC | 3 cut(s) | 27, 250, 610 |
| Mox20I | TGGCCA | 1 cut(s) | 587 |
| MscI | TGGCCA | 1 cut(s) | 587 |
| MseI | TTAA | 2 cut(s) | 594, 658 |
| Msp20I | TGGCCA | 1 cut(s) | 587 |
| MspI | CCGG | 1 cut(s) | 647 |
| MspR9I | CCNGG | 2 cut(s) | 393, 589 |
| Mva1269I | GAATGC | 1 cut(s) | 613 |
| MvaI | CCWGG | 2 cut(s) | 393, 589 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 502 |
| NdeI | CATATG | 1 cut(s) | 415 |
| NdeII | GATC | 2 cut(s) | 352, 467 |
| NlaIII | CATG | 1 cut(s) | 368 |
| NlaIV | GGNNCC | 1 cut(s) | 105 |
| NmuCI | GTSAC | 1 cut(s) | 229 |
| PctI | GAATGC | 1 cut(s) | 613 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 188, 448 |
| PleI | GAGTC | 3 cut(s) | 156, 395, 447 |
| PpsI | GAGTC | 3 cut(s) | 156, 395, 447 |
| Psp6I | CCWGG | 2 cut(s) | 391, 587 |
| PspGI | CCWGG | 2 cut(s) | 391, 587 |
| PspN4I | GGNNCC | 1 cut(s) | 105 |
| SaqAI | TTAA | 2 cut(s) | 594, 658 |
| Sau3AI | GATC | 2 cut(s) | 352, 467 |
| SchI | GAGTC | 3 cut(s) | 157, 396, 447 |
| ScrFI | CCNGG | 2 cut(s) | 393, 589 |
| SetI | ASST | 7 cut(s) | 130, 157, 221, 397, 406, 532, 646 |
| SfaNI | GCATC | 1 cut(s) | 379 |
| SfcI | CTRYAG | 1 cut(s) | 500 |
| Sse9I | AATT | 6 cut(s) | 21, 164, 198, 249, 543, 655 |
| SsiI | CCGC | 1 cut(s) | 238 |
| SspMI | CTAG | 1 cut(s) | 438 |
| StyD4I | CCNGG | 2 cut(s) | 391, 587 |
| StyI | CCWWGG | 1 cut(s) | 241 |
| TaaI | ACNGT | 1 cut(s) | 572 |
| TaqI | TCGA | 1 cut(s) | 19 |
| TasI | AATT | 6 cut(s) | 21, 164, 198, 249, 543, 655 |
| Tru1I | TTAA | 2 cut(s) | 594, 658 |
| Tru9I | TTAA | 2 cut(s) | 594, 658 |
| TseFI | GTSAC | 1 cut(s) | 229 |
| Tsp45I | GTSAC | 1 cut(s) | 229 |
| TspDTI | ATGAA | 1 cut(s) | 620 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 188, 448 |
| XapI | RAATTY | 1 cut(s) | 164 |
| XspI | CTAG | 1 cut(s) | 438 |