Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0001244

Physical Location & Seq

Genomic Coordinates Reverse (-)

2288802 .. 2291925

Gene Structure 3124 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGGCGAAAATAAAAAAGGAAAAAGAGGTCGAAAAGCCAAAACCCCAGAAGCCGATGACACCAACATCACCACCATGGACATCCAATACACCAACCCCACCGCCGCGGACGACGCCGTCTCAGTTCCGGCGAGCGAATCCACCTCGGACCCCGGCAGCTCCCAGCCTGCCCGCCGCGGTAGAGGGCGTCCCAGAAAGACCGAGAACGCCAACATGGCGGGTTCGCCGGAACGGCGGAGCTCGAGACACATGGATCAGAACGGCGATGGTGGGCACGCCTTGGCGGTCGTTTCGGAGCCGCCGATGATGGCGCCGAGCCGGGAGAGCGTGGAGAGGGTGGTCCCCGCCATGGACGCCGTCGTGAAGGTGTTCTGTGTCCACACGGAGCCGAATTTCTCGCTGCCGTGGCAGCGGAAGCGGCAGTACAGTTCGAGCAGTAGTGGGTTTGTGATTGGGGGAAGGAGGGTGCTGACCAATGCGCATTCTGTGGAGCACCATACGCAGGTGAAGCTCAAGAAACGCGGCTCTGAAACGAAGTACTTGGCCACTGTGTTAGCCATAGGCACCGAGTGTGATATCGCGATGCTTACTGTGAGCGATGATGAGTTCTGGAAAGGAGTTTCACCTCTGGAGTTTGGAGAGTTACCTGCACTCCAAGATGCTGTGACAGTTGTCGGCTACCCTATTGGGGGTGACACGATCTCTGTGACAAGTGGTGTTGTGTCACGTATGGAGATACTGTCTTATGTTCATGGATCGACTGAGCTTCTAGGACTGCAGATAGACGCTGCAATAAACTCTGGAAACTCTGGTGGGCCTGCCTTTAATGATAAGGGAGAATGCGTGGGTATCGCGTTTCAGTCTCTTAAACATGAAGATGCGGAAAATATAGGCTATGTCATACCGACACCAGTTATTAAGCACTTCATCCAAGATTATGAGAAGAATGGGGCATATACAGGGTTCCCAGTTCTTGGAATCGAATGGCAGAAGATGGAAAATCCAGATCTGCGGATCTCAATGGGGATGAGACCTGATCAAAAGGGTGTGCGTATTAGAAGAGTTGAGCCTACAGCTCCACATTCTCATGTTCTGCAGCCATCTGATGTTATTCTTAGCTTCGATGGGGTTAATATTGCAAATGACGGCACAGTTCCATTCAGGCATGGAGAGCGCATAGGTTTCAGTTACCTTGTCTCTCAAAAATATACTGGCGATAGTGCTCTGGTAAAAGTTCTTCGTAACTCAGAGATACATGTGTACAACATAAAACTTGGAACTCACAAGCGACTCATCCCAGCACACATTAAGGGTAAACCTCCTTCGTATTACATCGTTGGTGGTTTTGTTTTTGCAGCTGTATCTGTTCCATATCTGCGTTCTGAGGTGCTTGTTGCTGACATTAACATAGGATACGAGGACATTGTGAACACTCAGGTTCTTGCTTTCAATGGTAAGCCTGTGAAAAATCTGAAGAGTCTGGTTAGCATGGTGGAGAATTGTGACGACAAGTACCTAAAGTTTGACCTAGAATACAATCAGGTTCGCTCTCTCTCTCTCTCTCTGCGCACAGGCTTTGTACTTTTCGTTTGGTGGCTGAATTGCGCAGCTCTCTGTGCAGATGGTTGTACTAGAGACAAAAACCGCCAAGGCGTCAACTCTAGATATCCTCCTTACACATTGCATACCTTCAGCTATGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009507 GO:0009536 GO:0016787 GO:0017171 GO:0019538 GO:0031974 GO:0031981 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_2 Trypsin_2

Protein Analysis

568

Amino Acids

62.28

Weight (kDa)

8.29

Isoelectric Point (pI)

44.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin	PF00089	132 - 310	8.3e-20	Trypsin
Trypsin_2	PF13365	147 - 284	5.2e-21	Trypsin-like peptidase domain
PDZ_3	PF17815	461 - 515	1.9e-15	PDZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40200
fragaria_vesca	FvH4_5g04990 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350
malus_domestica	MD06G1178100.v1.1 MD06G1178200.v1.1 MD09G1037000.v1.1 MD09G1037100.v1.1 MD14G1184600.v1.1 MD17G1038400.v1.1 MD17G1038500.v1.1
prunus_persica	Prupe.3G280500_v2.0.a1 Prupe.3G280600_v2.0.a1 Prupe.5G177300_v2.0.a1 Prupe.5G177300_v2.0.a1
pyrus_communis	pycom06g15840 pycom111g02980 pycom14g15360 pycom17g03470
rosa_chinensis	RchiOBHm_Chr1g0327041 RchiOBHm_Chr2g0170661 RchiOBHm_Chr2g0170671 RchiOBHm_Chr7g0194051
rosa_laevigata	RLG00000004221 RLG00000021973 RLG00000021974
rosa_multiflora	Rmu_sc0003787.1_g000010 Rmu_sc0003787.1_g000011 Rmu_sc0009433.1_g000001 Rmu_sc0023958.1_g000001 Rmu_sc0042111.1_g000001
rosa_roxburghii	Rroxscaffold_2G00081130 Rroxscaffold_2G00081140 Rroxscaffold_3G00261590
rosa_rugosa	Rorug02G0550300 Rorug07G0013500
rosa_samantha	Rh2AG623200 Rh2AG623300 Rh2BG633700 Rh2CG602900 Rh2CG603000 Rh2DG646500 Rh7AG140600 Rh7BG141300 Rh7CG144700 Rh7DG142000 Rh7DG324300
rosa_wichuraiana	Rw2G028950 Rw2G051610 Rw2G051620 Rw7G012010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	493
AasI	GACNNNNNNGTC	1 cut(s)	116
Acc16I	TGCGCA	3 cut(s)	480, 1568, 1606
Acc36I	ACCTGC	2 cut(s)	493, 655
AccB1I	GGYRCC	2 cut(s)	310, 563
AccB7I	CCANNNNNTGG	1 cut(s)	974
AccII	CGCG	5 cut(s)	107, 177, 522, 581, 854
AclWI	GGATC	3 cut(s)	261, 763, 1022
AcoI	YGGCCR	1 cut(s)	543
AcsI	RAATTY	1 cut(s)	391
AcuI	CTGAAG	2 cut(s)	1493, 1675
AcyI	GRCGYC	5 cut(s)	114, 187, 311, 354, 1653
AdeI	CACNNNGTG	1 cut(s)	570
AfaI	GTAC	6 cut(s)	425, 539, 1262, 1514, 1581, 1630
AfiI	CCNNNNNNNGG	5 cut(s)	349, 502, 688, 689, 974
AflIII	ACRYGT	1 cut(s)	1255
AgsI	TTSAA	1 cut(s)	1450
AluBI	AGCT	9 cut(s)	159, 240, 511, 766, 1076, 1119, 1358, 1610, 1695
AluI	AGCT	9 cut(s)	159, 240, 511, 766, 1076, 1119, 1358, 1610, 1695
Alw21I	GWGCWC	3 cut(s)	242, 495, 1225
Alw26I	GTCTC	6 cut(s)	124, 238, 867, 1024, 1201, 1629
AlwI	GGATC	3 cut(s)	261, 763, 1022
Ama87I	CYCGRG	1 cut(s)	241
AoxI	GGCC	2 cut(s)	543, 815
ApeKI	GCWGC	7 cut(s)	156, 400, 409, 788, 1096, 1355, 1607
ApoI	RAATTY	1 cut(s)	391
Asp700I	GAANNNNTTC	1 cut(s)	368
AspLEI	GCGC	5 cut(s)	313, 481, 1176, 1569, 1607
AspS9I	GGNCC	3 cut(s)	148, 340, 815
AsuC2I	CCSGG	2 cut(s)	153, 320
AsuHPI	GGTGA	4 cut(s)	61, 517, 615, 704
AvaI	CYCGRG	1 cut(s)	241
AvaII	GGWCC	2 cut(s)	148, 340
BaeGI	GKGCMC	1 cut(s)	276
BaeI	ACNNNNGTAYC	2 cut(s)	1244, 1277
BalI	TGGCCA	1 cut(s)	545
BanI	GGYRCC	2 cut(s)	310, 563
BanII	GRGCYC	1 cut(s)	242
BarI	GAAGNNNNNNTAC	6 cut(s)	407, 439, 1221, 1253, 1306, 1338
Bbv12I	GWGCWC	3 cut(s)	242, 495, 1225
BbvI	GCAGC	7 cut(s)	168, 387, 421, 775, 1108, 1367, 1619
BccI	CCATC	6 cut(s)	260, 301, 988, 1108, 1118, 1616
BceAI	ACGGC	6 cut(s)	101, 248, 277, 341, 388, 1162
BciVI	GTATCC	1 cut(s)	1406
BclI	TGATCA	1 cut(s)	1036
BcnI	CCSGG	2 cut(s)	153, 320
BcoDI	GTCTC	6 cut(s)	124, 238, 867, 1024, 1201, 1629
BfaI	CTAG	4 cut(s)	770, 1529, 1632, 1662
BfmI	CTRYAG	3 cut(s)	776, 1071, 1094
BfoI	RGCGCY	1 cut(s)	314
BfuAI	ACCTGC	2 cut(s)	493, 655
BfuI	GTATCC	1 cut(s)	1406
BglI	GCCNNNNNGGC	2 cut(s)	215, 232
BglII	AGATCT	1 cut(s)	1006
BmcAI	AGTACT	1 cut(s)	539
Bme1390I	CCNGG	2 cut(s)	153, 320
Bme18I	GGWCC	2 cut(s)	148, 340
BmeT110I	CYCGRG	1 cut(s)	241
BmgT120I	GGNCC	3 cut(s)	148, 340, 815
BmiI	GGNNCC	7 cut(s)	150, 297, 312, 342, 387, 565, 965
BmrFI	CCNGG	2 cut(s)	153, 320
BmrI	ACTGGG	1 cut(s)	962
BmsI	GCATC	3 cut(s)	573, 649, 868
BmuI	ACTGGG	1 cut(s)	962
BoxI	GACNNNNGTC	1 cut(s)	671
BpmI	CTGGAG	1 cut(s)	650
BpuEI	CTTGAG	1 cut(s)	497
BpuMI	CCSGG	2 cut(s)	153, 320
BsaAI	YACGTR	1 cut(s)	728
BsaHI	GRCGYC	5 cut(s)	114, 187, 311, 354, 1653
BsaI	GGTCTC	1 cut(s)	1024
BsaJI	CCNNGG	9 cut(s)	75, 105, 144, 151, 175, 279, 348, 404, 1648
BsaXI	ACNNNNNCTCC	6 cut(s)	636, 666, 725, 755, 828, 858
Bsc4I	CCNNNNNNNGG	5 cut(s)	349, 502, 688, 689, 974
Bse1I	ACTGG	3 cut(s)	911, 968, 1216
Bse3DI	GCAATG	1 cut(s)	1679
BseDI	CCNNGG	9 cut(s)	75, 105, 144, 151, 175, 279, 348, 404, 1648
BseGI	GGATG	4 cut(s)	81, 927, 1032, 1293
BseLI	CCNNNNNNNGG	5 cut(s)	349, 502, 688, 689, 974
BseMI	GCAATG	1 cut(s)	1679
BseMII	CTCAG	5 cut(s)	135, 753, 1260, 1374, 1448
BseNI	ACTGG	3 cut(s)	911, 968, 1216
BseSI	GKGCMC	1 cut(s)	276
BseXI	GCAGC	7 cut(s)	168, 387, 421, 775, 1108, 1367, 1619
BseYI	CCCAGC	2 cut(s)	162, 1297
BsgI	GTGCAG	2 cut(s)	633, 1638
Bsh1236I	CGCG	5 cut(s)	107, 177, 522, 581, 854
Bsh1285I	CGRYCG	1 cut(s)	288
BshFI	GGCC	2 cut(s)	545, 817
BshNI	GGYRCC	2 cut(s)	310, 563
BsiEI	CGRYCG	1 cut(s)	288
BsiHKAI	GWGCWC	3 cut(s)	242, 495, 1225
BsiHKCI	CYCGRG	1 cut(s)	241
BsiSI	CCGG	4 cut(s)	128, 153, 227, 319
BslFI	GGGAC	2 cut(s)	174, 326
BslI	CCNNNNNNNGG	5 cut(s)	349, 502, 688, 689, 974
BsmAI	GTCTC	6 cut(s)	124, 238, 867, 1024, 1201, 1629
BsmBI	CGTCTC	1 cut(s)	124
BsmFI	GGGAC	2 cut(s)	174, 326
BsmI	GAATGC	2 cut(s)	481, 845
BsnI	GGCC	2 cut(s)	545, 817
Bso31I	GGTCTC	1 cut(s)	1024
BsoBI	CYCGRG	1 cut(s)	241
Bsp1286I	GDGCHC	4 cut(s)	242, 276, 495, 1225
Bsp1407I	TGTACA	1 cut(s)	1260
Bsp143I	GATC	6 cut(s)	253, 699, 755, 1006, 1014, 1036
Bsp19I	CCATGG	2 cut(s)	75, 348
Bsp68I	TCGCGA	1 cut(s)	581
BspANI	GGCC	2 cut(s)	545, 817
BspCNI	CTCAG	5 cut(s)	134, 754, 1259, 1375, 1447
BspFNI	CGCG	5 cut(s)	107, 177, 522, 581, 854
BspLI	GGNNCC	7 cut(s)	150, 297, 312, 342, 387, 565, 965
BspMAI	CTGCAG	2 cut(s)	780, 1098
BspMI	ACCTGC	2 cut(s)	493, 655
BspPI	GGATC	3 cut(s)	261, 763, 1022
BspT107I	GGYRCC	2 cut(s)	310, 563
BspTNI	GGTCTC	1 cut(s)	1024
BsrDI	GCAATG	1 cut(s)	1679
BsrGI	TGTACA	1 cut(s)	1260
BsrI	ACTGG	3 cut(s)	911, 968, 1216
BssECI	CCNNGG	9 cut(s)	75, 105, 144, 151, 175, 279, 348, 404, 1648
BssMI	GATC	6 cut(s)	253, 699, 755, 1006, 1014, 1036
BssNI	GRCGYC	5 cut(s)	114, 187, 311, 354, 1653
BssT1I	CCWWGG	4 cut(s)	75, 279, 348, 1648
Bst4CI	ACNGT	6 cut(s)	428, 550, 592, 670, 741, 1153
Bst6I	CTCTTC	2 cut(s)	1054, 1469
BstACI	GRCGYC	5 cut(s)	114, 187, 311, 354, 1653
BstAUI	TGTACA	1 cut(s)	1260
BstBAI	YACGTR	1 cut(s)	728
BstC8I	GCNNGC	5 cut(s)	133, 168, 172, 276, 819
BstDEI	CTNAG	6 cut(s)	121, 762, 1115, 1246, 1383, 1434
BstDSI	CCRYGG	5 cut(s)	75, 105, 175, 348, 404
BstF5I	GGATG	4 cut(s)	81, 927, 1032, 1293
BstFNI	CGCG	5 cut(s)	107, 177, 522, 581, 854
BstH2I	RGCGCY	1 cut(s)	314
BstHHI	GCGC	5 cut(s)	313, 481, 1176, 1569, 1607
BstKTI	GATC	6 cut(s)	256, 702, 758, 1009, 1017, 1039
BstMAI	GTCTC	6 cut(s)	124, 238, 867, 1024, 1201, 1629
BstMBI	GATC	6 cut(s)	253, 699, 755, 1006, 1014, 1036
BstMCI	CGRYCG	1 cut(s)	288
BstNSI	RCATGY	1 cut(s)	1259
BstPAI	GACNNNNGTC	1 cut(s)	671
BstSCI	CCNGG	2 cut(s)	151, 318
BstSFI	CTRYAG	3 cut(s)	776, 1071, 1094
BstSLI	GKGCMC	1 cut(s)	276
BstUI	CGCG	5 cut(s)	107, 177, 522, 581, 854
BstV1I	GCAGC	7 cut(s)	168, 387, 421, 775, 1108, 1367, 1619
BstX2I	RGATCY	2 cut(s)	1006, 1014
BstYI	RGATCY	2 cut(s)	1006, 1014
BsuI	GTATCC	1 cut(s)	1406
BsuRI	GGCC	2 cut(s)	545, 817
BtgI	CCRYGG	5 cut(s)	75, 105, 175, 348, 404
BtgZI	GCGATG	3 cut(s)	279, 596, 612
BtsCI	GGATG	4 cut(s)	81, 927, 1032, 1293
BtsIMutI	CAGTG	1 cut(s)	546
BtuMI	TCGCGA	1 cut(s)	581
BveI	ACCTGC	2 cut(s)	493, 655
Cac8I	GCNNGC	5 cut(s)	133, 168, 172, 276, 819
CfoI	GCGC	5 cut(s)	313, 481, 1176, 1569, 1607
Cfr13I	GGNCC	3 cut(s)	148, 340, 815
Cfr42I	CCGCGG	2 cut(s)	108, 178
CseI	GACGC	5 cut(s)	122, 176, 362, 794, 1642
Csp6I	GTAC	6 cut(s)	424, 538, 1261, 1513, 1580, 1629
CviQI	GTAC	6 cut(s)	424, 538, 1261, 1513, 1580, 1629
DdeI	CTNAG	6 cut(s)	121, 762, 1115, 1246, 1383, 1434
DinI	GGCGCC	1 cut(s)	312
DpnI	GATC	6 cut(s)	255, 701, 757, 1008, 1016, 1038
DpnII	GATC	6 cut(s)	253, 699, 755, 1006, 1014, 1036
DraIII	CACNNNGTG	1 cut(s)	570
DrdI	GACNNNNNNGTC	1 cut(s)	116
DseDI	GACNNNNNNGTC	1 cut(s)	116
EaeI	YGGCCR	1 cut(s)	543
Eam1104I	CTCTTC	2 cut(s)	1054, 1469
EarI	CTCTTC	2 cut(s)	1054, 1469
EciI	GGCGGA	1 cut(s)	250
Ecl136II	GAGCTC	1 cut(s)	240
Eco130I	CCWWGG	4 cut(s)	75, 279, 348, 1648
Eco24I	GRGCYC	1 cut(s)	242
Eco31I	GGTCTC	1 cut(s)	1024
Eco32I	GATATC	2 cut(s)	577, 1667
Eco47I	GGWCC	2 cut(s)	148, 340
Eco53kI	GAGCTC	1 cut(s)	240
Eco57I	CTGAAG	2 cut(s)	1493, 1675
Eco88I	CYCGRG	1 cut(s)	241
EcoICRI	GAGCTC	1 cut(s)	240
EcoRV	GATATC	2 cut(s)	577, 1667
EcoT14I	CCWWGG	4 cut(s)	75, 279, 348, 1648
EcoT38I	GRGCYC	1 cut(s)	242
EgeI	GGCGCC	1 cut(s)	312
EheI	GGCGCC	1 cut(s)	312
ErhI	CCWWGG	4 cut(s)	75, 279, 348, 1648
Esp3I	CGTCTC	1 cut(s)	124
FaqI	GGGAC	2 cut(s)	174, 326
FauI	CCCGC	3 cut(s)	179, 211, 352
FbaI	TGATCA	1 cut(s)	1036
FokI	GGATG	4 cut(s)	68, 914, 1039, 1280
FriOI	GRGCYC	1 cut(s)	242
FspAI	RTGCGCAY	1 cut(s)	480
FspBI	CTAG	4 cut(s)	770, 1529, 1632, 1662
FspI	TGCGCA	3 cut(s)	480, 1568, 1606
GlaI	GCGC	5 cut(s)	312, 480, 1175, 1568, 1606
GsaI	CCCAGC	2 cut(s)	166, 1301
GsuI	CTGGAG	1 cut(s)	650
HaeII	RGCGCY	1 cut(s)	314
HaeIII	GGCC	2 cut(s)	545, 817
HapII	CCGG	4 cut(s)	128, 153, 227, 319
HgaI	GACGC	5 cut(s)	122, 176, 362, 794, 1642
HhaI	GCGC	5 cut(s)	313, 481, 1176, 1569, 1607
Hin1I	GRCGYC	5 cut(s)	114, 187, 311, 354, 1653
Hin6I	GCGC	5 cut(s)	311, 479, 1174, 1567, 1605
HinP1I	GCGC	5 cut(s)	311, 479, 1174, 1567, 1605
HincII	GTYRAC	1 cut(s)	1657
HindII	GTYRAC	1 cut(s)	1657
HinfI	GANTC	4 cut(s)	137, 978, 1290, 1477
HpaII	CCGG	4 cut(s)	128, 153, 227, 319
HphI	GGTGA	4 cut(s)	61, 517, 615, 704
Hpy166II	GTNNAC	5 cut(s)	379, 1261, 1316, 1429, 1657
Hpy188I	TCNGA	9 cut(s)	148, 258, 295, 529, 1105, 1249, 1384, 1473, 1703
Hpy188III	TCNNGA	9 cut(s)	243, 361, 514, 580, 610, 629, 801, 1004, 1662
Hpy8I	GTNNAC	5 cut(s)	379, 1261, 1316, 1429, 1657
Hpy99I	CGWCG	2 cut(s)	116, 362
HpyAV	CCTTC	4 cut(s)	358, 453, 1332, 1699
HpyCH4III	ACNGT	6 cut(s)	428, 550, 592, 670, 741, 1153
HpyCH4IV	ACGT	1 cut(s)	727
HpyCH4V	TGCA	8 cut(s)	650, 778, 791, 1096, 1139, 1355, 1619, 1684
HpyF3I	CTNAG	6 cut(s)	121, 762, 1115, 1246, 1383, 1434
HpySE526I	ACGT	1 cut(s)	727
Hsp92I	GRCGYC	5 cut(s)	114, 187, 311, 354, 1653
HspAI	GCGC	5 cut(s)	311, 479, 1174, 1567, 1605
KasI	GGCGCC	1 cut(s)	310
Ksp22I	TGATCA	1 cut(s)	1036
KspI	CCGCGG	2 cut(s)	108, 178
Kzo9I	GATC	6 cut(s)	253, 699, 755, 1006, 1014, 1036
LmnI	GCTCC	6 cut(s)	164, 237, 295, 385, 490, 1081
Lsp1109I	GCAGC	7 cut(s)	168, 387, 421, 775, 1108, 1367, 1619
LweI	GCATC	3 cut(s)	573, 649, 868
MaeI	CTAG	4 cut(s)	770, 1529, 1632, 1662
MaeII	ACGT	1 cut(s)	727
MaeIII	GTNAC	8 cut(s)	642, 664, 692, 706, 723, 1187, 1241, 1502
MalI	GATC	6 cut(s)	255, 701, 757, 1008, 1016, 1038
MboI	GATC	6 cut(s)	253, 699, 755, 1006, 1014, 1036
MboII	GAAGA	6 cut(s)	887, 955, 1003, 1071, 1229, 1486
MflI	RGATCY	2 cut(s)	1006, 1014
MhlI	GDGCHC	4 cut(s)	242, 276, 495, 1225
MlsI	TGGCCA	1 cut(s)	545
MluCI	AATT	3 cut(s)	391, 1498, 1600
MluNI	TGGCCA	1 cut(s)	545
Mly113I	GGCGCC	1 cut(s)	311
MlyI	GAGTC	2 cut(s)	1284, 1486
Mox20I	TGGCCA	1 cut(s)	545
MroXI	GAANNNNTTC	1 cut(s)	368
MscI	TGGCCA	1 cut(s)	545
MseI	TTAA	6 cut(s)	825, 867, 918, 1131, 1308, 1404
MslI	CAYNNNNRTG	3 cut(s)	74, 876, 1086
Msp20I	TGGCCA	1 cut(s)	545
MspA1I	CMGCKG	4 cut(s)	107, 177, 412, 1358
MspI	CCGG	4 cut(s)	128, 153, 227, 319
MspR9I	CCNGG	2 cut(s)	153, 320
Mva1269I	GAATGC	2 cut(s)	481, 845
MvnI	CGCG	5 cut(s)	107, 177, 522, 581, 854
NarI	GGCGCC	1 cut(s)	311
NciI	CCSGG	2 cut(s)	153, 320
NcoI	CCATGG	2 cut(s)	75, 348
NdeII	GATC	6 cut(s)	253, 699, 755, 1006, 1014, 1036
NlaIV	GGNNCC	7 cut(s)	150, 297, 312, 342, 387, 565, 965
NmeAIII	GCCGAG	1 cut(s)	339
NmuCI	GTSAC	5 cut(s)	664, 692, 706, 723, 1502
NruI	TCGCGA	1 cut(s)	581
NsbI	TGCGCA	3 cut(s)	480, 1568, 1606
NspI	RCATGY	1 cut(s)	1259
PaeR7I	CTCGAG	1 cut(s)	241
PaqCI	CACCTGC	1 cut(s)	493
PciI	ACATGT	1 cut(s)	1255
PcsI	WCGNNNNNNNCGW	1 cut(s)	299
PctI	GAATGC	2 cut(s)	481, 845
PdmI	GAANNNNTTC	1 cut(s)	368
PfeI	GAWTC	2 cut(s)	137, 978
PflFI	GACNNNGTC	2 cut(s)	116, 356
PflMI	CCANNNNNTGG	1 cut(s)	974
PleI	GAGTC	2 cut(s)	1284, 1485
PluTI	GGCGCC	1 cut(s)	314
PpsI	GAGTC	2 cut(s)	1284, 1485
Ppu21I	YACGTR	1 cut(s)	728
PscI	ACATGT	1 cut(s)	1255
PshAI	GACNNNNGTC	1 cut(s)	671
Psp124BI	GAGCTC	1 cut(s)	242
PspFI	CCCAGC	2 cut(s)	162, 1297
PspN4I	GGNNCC	7 cut(s)	150, 297, 312, 342, 387, 565, 965
PspPI	GGNCC	3 cut(s)	148, 340, 815
PstI	CTGCAG	2 cut(s)	780, 1098
PsuI	RGATCY	2 cut(s)	1006, 1014
PsyI	GACNNNGTC	2 cut(s)	116, 356
PvuII	CAGCTG	1 cut(s)	1358
RruI	TCGCGA	1 cut(s)	581
RsaI	GTAC	6 cut(s)	425, 539, 1262, 1514, 1581, 1630
RsaNI	GTAC	6 cut(s)	424, 538, 1261, 1513, 1580, 1629
RseI	CAYNNNNRTG	3 cut(s)	74, 876, 1086
SacI	GAGCTC	1 cut(s)	242
SacII	CCGCGG	2 cut(s)	108, 178
SaqAI	TTAA	6 cut(s)	825, 867, 918, 1131, 1308, 1404
Sau3AI	GATC	6 cut(s)	253, 699, 755, 1006, 1014, 1036
Sau96I	GGNCC	3 cut(s)	148, 340, 815
ScaI	AGTACT	1 cut(s)	539
SchI	GAGTC	2 cut(s)	1284, 1486
ScrFI	CCNGG	2 cut(s)	153, 320
SduI	GDGCHC	4 cut(s)	242, 276, 495, 1225
SfaNI	GCATC	3 cut(s)	573, 649, 868
SfcI	CTRYAG	3 cut(s)	776, 1071, 1094
SfoI	GGCGCC	1 cut(s)	312
Sfr274I	CTCGAG	1 cut(s)	241
Sfr303I	CCGCGG	2 cut(s)	108, 178
SgrBI	CCGCGG	2 cut(s)	108, 178
SinI	GGWCC	2 cut(s)	148, 340
SlaI	CTCGAG	1 cut(s)	241
SmiMI	CAYNNNNRTG	3 cut(s)	74, 876, 1086
SmlI	CTYRAG	2 cut(s)	241, 512
SmoI	CTYRAG	2 cut(s)	241, 512
Sse9I	AATT	3 cut(s)	391, 1498, 1600
SspDI	GGCGCC	1 cut(s)	310
SspI	AATATT	1 cut(s)	1135
SspMI	CTAG	4 cut(s)	770, 1529, 1632, 1662
SstI	GAGCTC	1 cut(s)	242
StyD4I	CCNGG	2 cut(s)	151, 318
StyI	CCWWGG	4 cut(s)	75, 279, 348, 1648
TaaI	ACNGT	6 cut(s)	428, 550, 592, 670, 741, 1153
TaiI	ACGT	1 cut(s)	730
TaqI	TCGA	6 cut(s)	31, 242, 431, 758, 981, 1122
TaqII	GACCGA	1 cut(s)	215
TasI	AATT	3 cut(s)	391, 1498, 1600
TatI	WGTACW	5 cut(s)	423, 537, 1260, 1579, 1628
TauI	GCSGC	5 cut(s)	107, 177, 301, 421, 525
TfiI	GAWTC	2 cut(s)	137, 978
Tru1I	TTAA	6 cut(s)	825, 867, 918, 1131, 1308, 1404
Tru9I	TTAA	6 cut(s)	825, 867, 918, 1131, 1308, 1404
TscAI	CASTG	1 cut(s)	553
TseFI	GTSAC	5 cut(s)	664, 692, 706, 723, 1502
TseI	GCWGC	7 cut(s)	156, 400, 409, 788, 1096, 1355, 1607
Tsp45I	GTSAC	5 cut(s)	664, 692, 706, 723, 1502
TspDTI	ATGAA	3 cut(s)	740, 888, 916
TspGWI	ACGGA	1 cut(s)	398
TspRI	CASTG	1 cut(s)	553
Tth111I	GACNNNGTC	2 cut(s)	116, 356
Van91I	CCANNNNNTGG	1 cut(s)	974
VpaK11BI	GGWCC	2 cut(s)	148, 340
XapI	RAATTY	1 cut(s)	391
XbaI	TCTAGA	1 cut(s)	1661
XceI	RCATGY	1 cut(s)	1259
XhoI	CTCGAG	1 cut(s)	241
XmnI	GAANNNNTTC	1 cut(s)	368
XspI	CTAG	4 cut(s)	770, 1529, 1632, 1662
ZrmI	AGTACT	1 cut(s)	539

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.