protease Do-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 893 |
| Acc36I | ACCTGC | 1 cut(s) | 1180 |
| AccB1I | GGYRCC | 1 cut(s) | 215 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 626, 1297 |
| AccI | GTMKAC | 1 cut(s) | 410 |
| AccII | CGCG | 3 cut(s) | 8, 174, 379 |
| AciI | CCGC | 6 cut(s) | 8, 108, 174, 379, 533, 1102 |
| AclWI | GGATC | 2 cut(s) | 713, 1026 |
| AcoI | YGGCCR | 2 cut(s) | 195, 1236 |
| AcsI | RAATTY | 2 cut(s) | 43, 1274 |
| AdeI | CACNNNGTG | 2 cut(s) | 139, 222 |
| AfaI | GTAC | 3 cut(s) | 77, 191, 667 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 341, 626, 1297 |
| AgeI | ACCGGT | 1 cut(s) | 277 |
| AgsI | TTSAA | 4 cut(s) | 748, 1061, 1273, 1387 |
| AjnI | CCWGG | 1 cut(s) | 153 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 684, 716 |
| AluBI | AGCT | 8 cut(s) | 81, 163, 771, 1010, 1064, 1123, 1233, 1331 |
| AluI | AGCT | 8 cut(s) | 81, 163, 771, 1010, 1064, 1123, 1233, 1331 |
| Alw21I | GWGCWC | 1 cut(s) | 123 |
| Alw26I | GTCTC | 1 cut(s) | 339 |
| AlwI | GGATC | 2 cut(s) | 713, 1026 |
| Ama87I | CYCGRG | 2 cut(s) | 82, 460 |
| AoxI | GGCC | 3 cut(s) | 195, 467, 1236 |
| ApeKI | GCWGC | 8 cut(s) | 52, 61, 87, 304, 440, 1090, 1120, 1328 |
| ApoI | RAATTY | 2 cut(s) | 43, 1274 |
| AsiGI | ACCGGT | 1 cut(s) | 277 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 20 |
| AspLEI | GCGC | 3 cut(s) | 174, 304, 894 |
| AspS9I | GGNCC | 1 cut(s) | 467 |
| AsuHPI | GGTGA | 4 cut(s) | 25, 115, 267, 1101 |
| AvaI | CYCGRG | 2 cut(s) | 82, 460 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 996, 1029 |
| BalI | TGGCCA | 2 cut(s) | 197, 1238 |
| BanI | GGYRCC | 1 cut(s) | 215 |
| BbsI | GAAGAC | 1 cut(s) | 1179 |
| Bbv12I | GWGCWC | 1 cut(s) | 123 |
| BbvI | GCAGC | 8 cut(s) | 39, 73, 99, 291, 427, 1077, 1132, 1340 |
| BccI | CCATC | 4 cut(s) | 760, 770, 791, 1291 |
| BceAI | ACGGC | 1 cut(s) | 40 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 400, 434 |
| BciT130I | CCWGG | 1 cut(s) | 155 |
| BcoDI | GTCTC | 1 cut(s) | 339 |
| BfaI | CTAG | 2 cut(s) | 422, 1337 |
| BfmI | CTRYAG | 1 cut(s) | 305 |
| BfuAI | ACCTGC | 1 cut(s) | 1180 |
| BmcAI | AGTACT | 1 cut(s) | 191 |
| Bme1390I | CCNGG | 1 cut(s) | 155 |
| BmeT110I | CYCGRG | 2 cut(s) | 82, 460 |
| BmgT120I | GGNCC | 1 cut(s) | 467 |
| BmiI | GGNNCC | 2 cut(s) | 178, 217 |
| BmrFI | CCNGG | 1 cut(s) | 155 |
| BmrI | ACTGGG | 1 cut(s) | 873 |
| BmsI | GCATC | 5 cut(s) | 225, 301, 427, 520, 938 |
| BmuI | ACTGGG | 1 cut(s) | 873 |
| BpiI | GAAGAC | 1 cut(s) | 1179 |
| BpuEI | CTTGAG | 1 cut(s) | 149 |
| BsaJI | CCNNGG | 2 cut(s) | 56, 153 |
| BsaWI | WCCGGW | 2 cut(s) | 277, 1111 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 341, 626, 1297 |
| Bse118I | RCCGGY | 1 cut(s) | 277 |
| Bse1I | ACTGG | 2 cut(s) | 563, 868 |
| Bse3DI | GCAATG | 2 cut(s) | 228, 1377 |
| BseBI | CCWGG | 1 cut(s) | 155 |
| BseDI | CCNNGG | 2 cut(s) | 56, 153 |
| BseGI | GGATG | 6 cut(s) | 316, 535, 684, 929, 1120, 1267 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 341, 626, 1297 |
| BseMI | GCAATG | 2 cut(s) | 228, 1377 |
| BseMII | CTCAG | 6 cut(s) | 150, 752, 781, 891, 922, 1151 |
| BseNI | ACTGG | 2 cut(s) | 563, 868 |
| BseXI | GCAGC | 8 cut(s) | 39, 73, 99, 291, 427, 1077, 1132, 1340 |
| BsgI | GTGCAG | 1 cut(s) | 10 |
| Bsh1236I | CGCG | 3 cut(s) | 8, 174, 379 |
| BshFI | GGCC | 3 cut(s) | 197, 469, 1238 |
| BshNI | GGYRCC | 1 cut(s) | 215 |
| BshTI | ACCGGT | 1 cut(s) | 277 |
| BsiHKAI | GWGCWC | 1 cut(s) | 123 |
| BsiHKCI | CYCGRG | 2 cut(s) | 82, 460 |
| BsiSI | CCGG | 2 cut(s) | 278, 1112 |
| BslFI | GGGAC | 1 cut(s) | 499 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 341, 626, 1297 |
| BsmAI | GTCTC | 1 cut(s) | 339 |
| BsmFI | GGGAC | 1 cut(s) | 499 |
| BsmI | GAATGC | 1 cut(s) | 1093 |
| BsnI | GGCC | 3 cut(s) | 197, 469, 1238 |
| BsoBI | CYCGRG | 2 cut(s) | 82, 460 |
| Bsp1286I | GDGCHC | 1 cut(s) | 123 |
| Bsp143I | GATC | 3 cut(s) | 444, 718, 1031 |
| BspACI | CCGC | 6 cut(s) | 8, 108, 174, 379, 533, 1102 |
| BspANI | GGCC | 3 cut(s) | 197, 469, 1238 |
| BspCNI | CTCAG | 6 cut(s) | 149, 751, 780, 892, 921, 1150 |
| BspFNI | CGCG | 3 cut(s) | 8, 174, 379 |
| BspLI | GGNNCC | 2 cut(s) | 178, 217 |
| BspMAI | CTGCAG | 1 cut(s) | 309 |
| BspMI | ACCTGC | 1 cut(s) | 1180 |
| BspPI | GGATC | 2 cut(s) | 713, 1026 |
| BspT107I | GGYRCC | 1 cut(s) | 215 |
| BsrDI | GCAATG | 2 cut(s) | 228, 1377 |
| BsrFI | RCCGGY | 1 cut(s) | 277 |
| BsrI | ACTGG | 2 cut(s) | 563, 868 |
| BssAI | RCCGGY | 1 cut(s) | 277 |
| BssECI | CCNNGG | 2 cut(s) | 56, 153 |
| BssMI | GATC | 3 cut(s) | 444, 718, 1031 |
| Bst2UI | CCWGG | 1 cut(s) | 155 |
| Bst4CI | ACNGT | 6 cut(s) | 202, 244, 322, 805, 1256, 1365 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1099 |
| BstC8I | GCNNGC | 4 cut(s) | 29, 300, 471, 1240 |
| BstDEI | CTNAG | 6 cut(s) | 136, 738, 767, 900, 908, 1137 |
| BstDSI | CCRYGG | 1 cut(s) | 56 |
| BstF5I | GGATG | 6 cut(s) | 316, 535, 684, 929, 1120, 1267 |
| BstFNI | CGCG | 3 cut(s) | 8, 174, 379 |
| BstHHI | GCGC | 3 cut(s) | 174, 304, 894 |
| BstKTI | GATC | 3 cut(s) | 447, 721, 1034 |
| BstMAI | GTCTC | 1 cut(s) | 339 |
| BstMBI | GATC | 3 cut(s) | 444, 718, 1031 |
| BstNI | CCWGG | 1 cut(s) | 155 |
| BstSCI | CCNGG | 1 cut(s) | 153 |
| BstSFI | CTRYAG | 1 cut(s) | 305 |
| BstUI | CGCG | 3 cut(s) | 8, 174, 379 |
| BstV1I | GCAGC | 8 cut(s) | 39, 73, 99, 291, 427, 1077, 1132, 1340 |
| BstV2I | GAAGAC | 1 cut(s) | 1179 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 193, 730 |
| BsuRI | GGCC | 3 cut(s) | 197, 469, 1238 |
| BtgI | CCRYGG | 1 cut(s) | 56 |
| BtgZI | GCGATG | 1 cut(s) | 248 |
| BtsCI | GGATG | 6 cut(s) | 316, 535, 684, 929, 1120, 1267 |
| BtsI | GCAGTG | 3 cut(s) | 97, 723, 1354 |
| BtsIMutI | CAGTG | 6 cut(s) | 97, 144, 198, 363, 723, 1354 |
| BveI | ACCTGC | 1 cut(s) | 1180 |
| Cac8I | GCNNGC | 4 cut(s) | 29, 300, 471, 1240 |
| CfoI | GCGC | 3 cut(s) | 174, 304, 894 |
| Cfr10I | RCCGGY | 1 cut(s) | 277 |
| Cfr13I | GGNCC | 1 cut(s) | 467 |
| CseI | GACGC | 1 cut(s) | 14 |
| Csp6I | GTAC | 3 cut(s) | 76, 190, 666 |
| CspAI | ACCGGT | 1 cut(s) | 277 |
| CviAII | CATG | 4 cut(s) | 404, 524, 818, 1243 |
| CviQI | GTAC | 3 cut(s) | 76, 190, 666 |
| DdeI | CTNAG | 6 cut(s) | 136, 738, 767, 900, 908, 1137 |
| DpnI | GATC | 3 cut(s) | 446, 720, 1033 |
| DpnII | GATC | 3 cut(s) | 444, 718, 1031 |
| DraIII | CACNNNGTG | 2 cut(s) | 139, 222 |
| EaeI | YGGCCR | 2 cut(s) | 195, 1236 |
| Eco32I | GATATC | 1 cut(s) | 1156 |
| Eco88I | CYCGRG | 2 cut(s) | 82, 460 |
| EcoRII | CCWGG | 1 cut(s) | 153 |
| EcoRV | GATATC | 1 cut(s) | 1156 |
| FaeI | CATG | 4 cut(s) | 407, 527, 821, 1246 |
| FaqI | GGGAC | 1 cut(s) | 499 |
| FatI | CATG | 4 cut(s) | 403, 523, 817, 1242 |
| FblI | GTMKAC | 1 cut(s) | 410 |
| FokI | GGATG | 6 cut(s) | 323, 542, 691, 916, 1127, 1274 |
| FspBI | CTAG | 2 cut(s) | 422, 1337 |
| FspI | TGCGCA | 1 cut(s) | 893 |
| GlaI | GCGC | 3 cut(s) | 173, 303, 893 |
| HaeIII | GGCC | 3 cut(s) | 197, 469, 1238 |
| HapII | CCGG | 2 cut(s) | 278, 1112 |
| HgaI | GACGC | 1 cut(s) | 14 |
| HhaI | GCGC | 3 cut(s) | 174, 304, 894 |
| Hin1II | CATG | 4 cut(s) | 407, 527, 821, 1246 |
| Hin6I | GCGC | 3 cut(s) | 172, 302, 892 |
| HinP1I | GCGC | 3 cut(s) | 172, 302, 892 |
| HincII | GTYRAC | 2 cut(s) | 411, 1183 |
| HindII | GTYRAC | 2 cut(s) | 411, 1183 |
| HindIII | AAGCTT | 1 cut(s) | 1231 |
| HinfI | GANTC | 4 cut(s) | 388, 734, 904, 1222 |
| HpaI | GTTAAC | 1 cut(s) | 1183 |
| HpaII | CCGG | 2 cut(s) | 278, 1112 |
| HphI | GGTGA | 4 cut(s) | 25, 115, 267, 1101 |
| Hpy166II | GTNNAC | 2 cut(s) | 411, 1183 |
| Hpy188I | TCNGA | 8 cut(s) | 181, 336, 710, 757, 901, 1036, 1310, 1378 |
| Hpy188III | TCNNGA | 5 cut(s) | 166, 453, 656, 731, 1079 |
| Hpy8I | GTNNAC | 2 cut(s) | 411, 1183 |
| HpyAV | CCTTC | 3 cut(s) | 10, 260, 984 |
| HpyCH4III | ACNGT | 6 cut(s) | 202, 244, 322, 805, 1256, 1365 |
| HpyF3I | CTNAG | 6 cut(s) | 136, 738, 767, 900, 908, 1137 |
| Hsp92II | CATG | 4 cut(s) | 407, 527, 821, 1246 |
| HspAI | GCGC | 3 cut(s) | 172, 302, 892 |
| KspAI | GTTAAC | 1 cut(s) | 1183 |
| Kzo9I | GATC | 3 cut(s) | 444, 718, 1031 |
| LmnI | GCTCC | 4 cut(s) | 142, 182, 602, 1069 |
| Lsp1109I | GCAGC | 8 cut(s) | 39, 73, 99, 291, 427, 1077, 1132, 1340 |
| LweI | GCATC | 5 cut(s) | 225, 301, 427, 520, 938 |
| MaeI | CTAG | 2 cut(s) | 422, 1337 |
| MaeIII | GTNAC | 6 cut(s) | 224, 273, 316, 358, 839, 1107 |
| MalI | GATC | 3 cut(s) | 446, 720, 1033 |
| MboI | GATC | 3 cut(s) | 444, 718, 1031 |
| MboII | GAAGA | 6 cut(s) | 607, 723, 755, 1019, 1184, 1231 |
| MhlI | GDGCHC | 1 cut(s) | 123 |
| MlsI | TGGCCA | 2 cut(s) | 197, 1238 |
| MluCI | AATT | 6 cut(s) | 43, 621, 714, 895, 945, 1274 |
| MluNI | TGGCCA | 2 cut(s) | 197, 1238 |
| MnlI | CCTC | 7 cut(s) | 63, 108, 520, 854, 981, 1252, 1316 |
| Mox20I | TGGCCA | 2 cut(s) | 197, 1238 |
| MroXI | GAANNNNTTC | 1 cut(s) | 20 |
| MscI | TGGCCA | 2 cut(s) | 197, 1238 |
| MseI | TTAA | 5 cut(s) | 477, 783, 882, 1182, 1203 |
| MslI | CAYNNNNRTG | 2 cut(s) | 233, 528 |
| Msp20I | TGGCCA | 2 cut(s) | 197, 1238 |
| MspA1I | CMGCKG | 1 cut(s) | 1010 |
| MspI | CCGG | 2 cut(s) | 278, 1112 |
| MspR9I | CCNGG | 1 cut(s) | 155 |
| Mva1269I | GAATGC | 1 cut(s) | 1093 |
| MvaI | CCWGG | 1 cut(s) | 155 |
| MvnI | CGCG | 3 cut(s) | 8, 174, 379 |
| NdeII | GATC | 3 cut(s) | 444, 718, 1031 |
| NlaIII | CATG | 4 cut(s) | 407, 527, 821, 1246 |
| NlaIV | GGNNCC | 2 cut(s) | 178, 217 |
| NmuCI | GTSAC | 4 cut(s) | 224, 273, 358, 1107 |
| NsbI | TGCGCA | 1 cut(s) | 893 |
| PaeR7I | CTCGAG | 1 cut(s) | 82 |
| PctI | GAATGC | 1 cut(s) | 1093 |
| PdmI | GAANNNNTTC | 1 cut(s) | 20 |
| PfeI | GAWTC | 4 cut(s) | 388, 734, 904, 1222 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 626, 1297 |
| PinAI | ACCGGT | 1 cut(s) | 277 |
| Psp6I | CCWGG | 1 cut(s) | 153 |
| PspGI | CCWGG | 1 cut(s) | 153 |
| PspN4I | GGNNCC | 2 cut(s) | 178, 217 |
| PspPI | GGNCC | 1 cut(s) | 467 |
| PspXI | VCTCGAGB | 1 cut(s) | 82 |
| PstI | CTGCAG | 1 cut(s) | 309 |
| PvuII | CAGCTG | 1 cut(s) | 1010 |
| RsaI | GTAC | 3 cut(s) | 77, 191, 667 |
| RsaNI | GTAC | 3 cut(s) | 76, 190, 666 |
| RseI | CAYNNNNRTG | 2 cut(s) | 233, 528 |
| SalI | GTCGAC | 1 cut(s) | 409 |
| SaqAI | TTAA | 5 cut(s) | 477, 783, 882, 1182, 1203 |
| Sau3AI | GATC | 3 cut(s) | 444, 718, 1031 |
| Sau96I | GGNCC | 1 cut(s) | 467 |
| ScaI | AGTACT | 1 cut(s) | 191 |
| ScrFI | CCNGG | 1 cut(s) | 155 |
| SduI | GDGCHC | 1 cut(s) | 123 |
| SfaNI | GCATC | 5 cut(s) | 225, 301, 427, 520, 938 |
| SfcI | CTRYAG | 1 cut(s) | 305 |
| Sfr274I | CTCGAG | 1 cut(s) | 82 |
| SgrAI | CRCCGGYG | 1 cut(s) | 277 |
| SlaI | CTCGAG | 1 cut(s) | 82 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 233, 528 |
| SmlI | CTYRAG | 2 cut(s) | 82, 164 |
| SmoI | CTYRAG | 2 cut(s) | 82, 164 |
| Sse9I | AATT | 6 cut(s) | 43, 621, 714, 895, 945, 1274 |
| SsiI | CCGC | 6 cut(s) | 8, 108, 174, 379, 533, 1102 |
| SspI | AATATT | 2 cut(s) | 541, 787 |
| SspMI | CTAG | 2 cut(s) | 422, 1337 |
| StyD4I | CCNGG | 1 cut(s) | 153 |
| TaaI | ACNGT | 6 cut(s) | 202, 244, 322, 805, 1256, 1365 |
| TaqI | TCGA | 3 cut(s) | 83, 410, 1030 |
| TasI | AATT | 6 cut(s) | 43, 621, 714, 895, 945, 1274 |
| TatI | WGTACW | 2 cut(s) | 75, 189 |
| TauI | GCSGC | 3 cut(s) | 111, 177, 1105 |
| TfiI | GAWTC | 4 cut(s) | 388, 734, 904, 1222 |
| Tru1I | TTAA | 5 cut(s) | 477, 783, 882, 1182, 1203 |
| Tru9I | TTAA | 5 cut(s) | 477, 783, 882, 1182, 1203 |
| TscAI | CASTG | 6 cut(s) | 97, 144, 205, 363, 730, 1361 |
| TseFI | GTSAC | 4 cut(s) | 224, 273, 358, 1107 |
| TseI | GCWGC | 8 cut(s) | 52, 61, 87, 304, 440, 1090, 1120, 1328 |
| Tsp45I | GTSAC | 4 cut(s) | 224, 273, 358, 1107 |
| TspDTI | ATGAA | 5 cut(s) | 392, 568, 695, 966, 1185 |
| TspRI | CASTG | 6 cut(s) | 97, 144, 205, 363, 730, 1361 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 626, 1297 |
| XapI | RAATTY | 2 cut(s) | 43, 1274 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 860 |
| XhoI | CTCGAG | 1 cut(s) | 82 |
| XmiI | GTMKAC | 1 cut(s) | 410 |
| XmnI | GAANNNNTTC | 1 cut(s) | 20 |
| XspI | CTAG | 2 cut(s) | 422, 1337 |
| ZrmI | AGTACT | 1 cut(s) | 191 |