Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001244

Physical Location & Seq

Genomic Coordinates Forward (+)

79300848 .. 79303643

Gene Structure 2796 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G051620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGTATCTCCAATTCATCAATCCCACAAGCACAACCACCGCCCTAAATGACAACCTTCCCACCTCCAAGATAGTTTCTTCATTGCCGCAACAATCACCACTTGTTCACCAAAACGGTGACTCGGGTGTTGTCTCGGAGCCGGAGCCGATGGTGCAGAGGTGGGAGGGTGGTGGCGGGAGAGTGGTGCCGGCGATGGACGCGGTGGTGAAGGTGTTTTGTGTTCATACGGAGCCGAATTTCTCGTTGCCGTGGCAGAGGAAGAAGCAGTACAGTTCGAGTAGTAGTGGGTTTGTGATTAGGGGCAGGAGGGTCTTGACCAATGCGCATTCTGTGGATCATCATACACAGGTCAAGGTCAAGAAGCGTGGCTCTGACACCAAGTACCTGGCCACTGTGTTGGCCATTGGAACCGAGTGTGATATTGCAATGCTTACGGTGAGTGATGATGAGTTCTGGGAAGGGATTTCACCTGTGGAGTTTGGGAACTTGCCTGCGCTGCAAGATGCTGTGACTGTTGTGGGCTATCCTATTGGGGGTGACACAATCTCTGTGACGAGTGGTGTTGTGTCACGCATGGAGATACTTTCTTATGTTCATGGCTCCACTGAGCTTCTGGGAATGCAGATAGATGCTGCAATAAACTCTGGAAACTCCGGTGGGCCGGCGTTTAATGATAAGGGAAAATGTGTGGGGATTGCATTCCAGTCTCTCAAGCATGAAGATGTGGAAAATATAGGCTATGTCATACCAATACCAGTTATTATGCACTTCATTTTGGATTATGAGAAGAACGGGTCATATACAGGGTTCCCAATTCTTGGAATTGAGTGGCAGAAGATGGAAAATCCTGATCTGCGCATGTCAATGGGGATGGGACCTGATCAAAAGGGTGTGCGAATCAGAAGAATGGAGCCGACATCTCCAGAATCTCTTGTTCTGAAACCATCTGATGTTATTCTTAGCTTTGATGGGGTTAATATTGCTAATGATGGCACTGTTCCATTCAGGCATGGAGAGCGCATAGGTTTCAGTTACCTTGTCTCCCAAAAATACATTGGGGATAATGCTCTAGTCAAAGTTCTAAGAAACTCAGAGACACTTGAATTCAACATAAAACTAGCAAAACACAAGGAACTGATCCCGTCACACATAGAGGGAAAACCTCCTTCTTATTACATCATTGCTGGATTTGTTTTCACAGCTGTATCTGTTCCATATCTGCGTTCTGAGTTTGGAAATATATTTGATGTTCCAATCAAATTATTGGACAAGCATTTACATGCAATGGCACAGTCTATTGATGAACAACTTGTTGTTGTTTCTCAGGTACTTGTTGCTGACATTAATATTGGATATGAGGATATTGTTAACAATCAGGTTCTTGACTTCAATGGTAAGCCTGTGAAGAACCTGAAGAGCTTAGCCAAGATGGTCGAGAATTGTGATGACGAGTACCTAAAGTTTAGCCTAGAATATAATCAGATGGTTGTTCTACAGACAAAAACTGCAAAGGCAGCAACACTAGATATCCTCACAACGCATTGCATATCTTCGTCCATGTCTGATGACCTTAAGACTAAAGACATTATGTTACAGGAAGTAGAGTCTTTGTCTGATGACCTTAAGACTAAGATATTAGAGGAAGAACAAATGCTTACTTCTCCTTTAGCTGTATCTACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009507 GO:0009536 GO:0016787 GO:0017171 GO:0019538 GO:0031974 GO:0031981 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_2 Trypsin_2

Protein Analysis

560

Amino Acids

61.67

Weight (kDa)

5.33

Isoelectric Point (pI)

47.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin	PF00089	80 - 258	7.3e-19	Trypsin
Trypsin_2	PF13365	95 - 232	5.1e-21	Trypsin-like peptidase domain
PDZ_2	PF13180	272 - 373	6.8e-06	PDZ domain
PDZ_3	PF17815	380 - 523	9.7e-45	PDZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40200
fragaria_vesca	FvH4_5g04990 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350
malus_domestica	MD06G1178100.v1.1 MD06G1178200.v1.1 MD09G1037000.v1.1 MD09G1037100.v1.1 MD14G1184600.v1.1 MD17G1038400.v1.1 MD17G1038500.v1.1
prunus_persica	Prupe.3G280500_v2.0.a1 Prupe.3G280600_v2.0.a1 Prupe.5G177300_v2.0.a1 Prupe.5G177300_v2.0.a1
pyrus_communis	pycom06g15840 pycom111g02980 pycom14g15360 pycom17g03470
rosa_chinensis	RchiOBHm_Chr1g0327041 RchiOBHm_Chr2g0170661 RchiOBHm_Chr2g0170671 RchiOBHm_Chr7g0194051
rosa_laevigata	RLG00000004221 RLG00000021973 RLG00000021974
rosa_multiflora	Rmu_sc0003787.1_g000010 Rmu_sc0003787.1_g000011 Rmu_sc0009433.1_g000001 Rmu_sc0023958.1_g000001 Rmu_sc0042111.1_g000001
rosa_roxburghii	Rroxscaffold_2G00081130 Rroxscaffold_2G00081140 Rroxscaffold_3G00261590
rosa_rugosa	Rorug02G0550300 Rorug07G0013500
rosa_samantha	Rh2AG623200 Rh2AG623300 Rh2BG633700 Rh2CG602900 Rh2CG603000 Rh2DG646500 Rh7AG140600 Rh7BG141300 Rh7CG144700 Rh7DG142000 Rh7DG324300
rosa_wichuraiana	Rw2G028950 Rw2G051610 Rw2G051620 Rw7G012010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	324, 857
AccB1I	GGYRCC	1 cut(s)	184
AccB7I	CCANNNNNTGG	1 cut(s)	818
AccII	CGCG	1 cut(s)	200
AciI	CCGC	4 cut(s)	39, 86, 174, 200
AclWI	GGATC	2 cut(s)	342, 1132
AcoI	YGGCCR	2 cut(s)	387, 399
AcsI	RAATTY	2 cut(s)	235, 1103
AcuI	CTGAAG	1 cut(s)	1433
AfaI	GTAC	4 cut(s)	269, 383, 1329, 1454
AfiI	CCNNNNNNNGG	2 cut(s)	533, 818
AflII	CTTAAG	2 cut(s)	1571, 1622
AgsI	TTSAA	3 cut(s)	1103, 1108, 1390
AjnI	CCWGG	1 cut(s)	384
AluBI	AGCT	5 cut(s)	610, 963, 1202, 1419, 1670
AluI	AGCT	5 cut(s)	610, 963, 1202, 1419, 1670
Alw26I	GTCTC	4 cut(s)	136, 711, 1045, 1088
AlwI	GGATC	2 cut(s)	342, 1132
Ama87I	CYCGRG	1 cut(s)	121
AoxI	GGCC	3 cut(s)	387, 399, 659
ApeKI	GCWGC	3 cut(s)	496, 632, 1514
ApoI	RAATTY	2 cut(s)	235, 1103
AseI	ATTAAT	1 cut(s)	1344
AspLEI	GCGC	4 cut(s)	325, 496, 858, 1020
AspS9I	GGNCC	2 cut(s)	659, 875
AsuHPI	GGTGA	7 cut(s)	87, 98, 128, 217, 448, 459, 548
AvaI	CYCGRG	1 cut(s)	121
AvaII	GGWCC	1 cut(s)	875
BaeI	ACNNNNGTAYC	2 cut(s)	1188, 1221
BalI	TGGCCA	2 cut(s)	389, 401
BanI	GGYRCC	1 cut(s)	184
BarI	GAAGNNNNNNTAC	2 cut(s)	251, 283
BbvI	GCAGC	3 cut(s)	483, 619, 1526
BccI	CCATC	9 cut(s)	142, 187, 832, 865, 952, 962, 983, 1423, 1477
BceAI	ACGGC	1 cut(s)	232
BciT130I	CCWGG	1 cut(s)	386
BclI	TGATCA	1 cut(s)	880
BcoDI	GTCTC	4 cut(s)	136, 711, 1045, 1088
BfaI	CTAG	4 cut(s)	1070, 1118, 1469, 1523
BfmI	CTRYAG	1 cut(s)	1493
BfrI	CTTAAG	2 cut(s)	1571, 1622
BisI	GCNGC	4 cut(s)	86, 497, 633, 1515
BlpI	GCTNAGC	1 cut(s)	1420
BlsI	GCNGC	4 cut(s)	87, 498, 634, 1516
Bme1390I	CCNGG	1 cut(s)	386
Bme18I	GGWCC	1 cut(s)	875
BmeT110I	CYCGRG	1 cut(s)	121
BmgT120I	GGNCC	2 cut(s)	659, 875
BmiI	GGNNCC	9 cut(s)	138, 144, 186, 231, 409, 601, 809, 876, 912
BmrFI	CCNGG	1 cut(s)	386
BmsI	GCATC	2 cut(s)	493, 619
BpmI	CTGGAG	1 cut(s)	906
Bpu1102I	GCTNAGC	1 cut(s)	1420
BpuEI	CTTGAG	1 cut(s)	695
BsaJI	CCNNGG	1 cut(s)	248
BsaWI	WCCGGW	1 cut(s)	653
BsaXI	ACNNNNNCTCC	2 cut(s)	1025, 1055
Bsc4I	CCNNNNNNNGG	2 cut(s)	533, 818
Bse118I	RCCGGY	2 cut(s)	187, 661
Bse1I	ACTGG	2 cut(s)	703, 755
Bse3DI	GCAATG	5 cut(s)	80, 432, 1179, 1290, 1540
BseBI	CCWGG	1 cut(s)	386
BseDI	CCNNGG	1 cut(s)	248
BseGI	GGATG	1 cut(s)	876
BseLI	CCNNNNNNNGG	2 cut(s)	533, 818
BseMI	GCAATG	5 cut(s)	80, 432, 1179, 1290, 1540
BseMII	CTCAG	4 cut(s)	597, 1104, 1218, 1337
BseNI	ACTGG	2 cut(s)	703, 755
BseXI	GCAGC	3 cut(s)	483, 619, 1526
BsgI	GTGCAG	1 cut(s)	173
Bsh1236I	CGCG	1 cut(s)	200
BshFI	GGCC	3 cut(s)	389, 401, 661
BshNI	GGYRCC	1 cut(s)	184
BsiHKCI	CYCGRG	1 cut(s)	121
BsiSI	CCGG	4 cut(s)	140, 188, 654, 662
BslFI	GGGAC	1 cut(s)	888
BslI	CCNNNNNNNGG	2 cut(s)	533, 818
BsmAI	GTCTC	4 cut(s)	136, 711, 1045, 1088
BsmFI	GGGAC	1 cut(s)	888
BsmI	GAATGC	3 cut(s)	325, 624, 698
BsnI	GGCC	3 cut(s)	389, 401, 661
BsoBI	CYCGRG	1 cut(s)	121
Bsp143I	GATC	4 cut(s)	334, 850, 880, 1137
Bsp1720I	GCTNAGC	1 cut(s)	1420
BspACI	CCGC	4 cut(s)	39, 86, 174, 200
BspANI	GGCC	3 cut(s)	389, 401, 661
BspCNI	CTCAG	4 cut(s)	598, 1103, 1219, 1336
BspFNI	CGCG	1 cut(s)	200
BspLI	GGNNCC	9 cut(s)	138, 144, 186, 231, 409, 601, 809, 876, 912
BspPI	GGATC	2 cut(s)	342, 1132
BspQI	GCTCTTC	1 cut(s)	1409
BspT107I	GGYRCC	1 cut(s)	184
BspTI	CTTAAG	2 cut(s)	1571, 1622
BsrDI	GCAATG	5 cut(s)	80, 432, 1179, 1290, 1540
BsrFI	RCCGGY	2 cut(s)	187, 661
BsrI	ACTGG	2 cut(s)	703, 755
BssAI	RCCGGY	2 cut(s)	187, 661
BssECI	CCNNGG	1 cut(s)	248
BssMI	GATC	4 cut(s)	334, 850, 880, 1137
Bst2UI	CCWGG	1 cut(s)	386
Bst4CI	ACNGT	7 cut(s)	116, 272, 394, 436, 514, 997, 1293
Bst6I	CTCTTC	1 cut(s)	1409
BstAFI	CTTAAG	2 cut(s)	1571, 1622
BstC8I	GCNNGC	3 cut(s)	189, 492, 663
BstDEI	CTNAG	8 cut(s)	606, 959, 1082, 1090, 1227, 1323, 1420, 1629
BstDSI	CCRYGG	1 cut(s)	248
BstF5I	GGATG	1 cut(s)	876
BstFNI	CGCG	1 cut(s)	200
BstHHI	GCGC	4 cut(s)	325, 496, 858, 1020
BstKTI	GATC	4 cut(s)	337, 853, 883, 1140
BstMAI	GTCTC	4 cut(s)	136, 711, 1045, 1088
BstMBI	GATC	4 cut(s)	334, 850, 880, 1137
BstMWI	GCNNNNNNNGC	5 cut(s)	151, 197, 496, 1015, 1514
BstNI	CCWGG	1 cut(s)	386
BstNSI	RCATGY	2 cut(s)	862, 1283
BstSCI	CCNGG	1 cut(s)	384
BstSFI	CTRYAG	1 cut(s)	1493
BstUI	CGCG	1 cut(s)	200
BstV1I	GCAGC	3 cut(s)	483, 619, 1526
BstXI	CCANNNNNNTGG	2 cut(s)	385, 397
BsuRI	GGCC	3 cut(s)	389, 401, 661
BtgI	CCRYGG	1 cut(s)	248
BtgZI	GCGATG	1 cut(s)	206
BtsCI	GGATG	1 cut(s)	876
BtsIMutI	CAGTG	3 cut(s)	390, 603, 993
Cac8I	GCNNGC	3 cut(s)	189, 492, 663
CfoI	GCGC	4 cut(s)	325, 496, 858, 1020
Cfr10I	RCCGGY	2 cut(s)	187, 661
Cfr13I	GGNCC	2 cut(s)	659, 875
CseI	GACGC	1 cut(s)	206
Csp6I	GTAC	4 cut(s)	268, 382, 1328, 1453
CspCI	CAANNNNNGTGG	2 cut(s)	346, 381
CviAII	CATG	7 cut(s)	574, 596, 716, 859, 1010, 1280, 1558
CviQI	GTAC	4 cut(s)	268, 382, 1328, 1453
DdeI	CTNAG	8 cut(s)	606, 959, 1082, 1090, 1227, 1323, 1420, 1629
DpnI	GATC	4 cut(s)	336, 852, 882, 1139
DpnII	GATC	4 cut(s)	334, 850, 880, 1137
EaeI	YGGCCR	2 cut(s)	387, 399
Eam1104I	CTCTTC	1 cut(s)	1409
EarI	CTCTTC	1 cut(s)	1409
Eco32I	GATATC	1 cut(s)	1528
Eco47I	GGWCC	1 cut(s)	875
Eco57I	CTGAAG	1 cut(s)	1433
Eco88I	CYCGRG	1 cut(s)	121
EcoO109I	RGGNCCY	1 cut(s)	875
EcoRI	GAATTC	1 cut(s)	1103
EcoRII	CCWGG	1 cut(s)	384
EcoRV	GATATC	1 cut(s)	1528
FaeI	CATG	7 cut(s)	577, 599, 719, 862, 1013, 1283, 1561
FaqI	GGGAC	1 cut(s)	888
FatI	CATG	7 cut(s)	573, 595, 715, 858, 1009, 1279, 1557
FauI	CCCGC	1 cut(s)	167
FbaI	TGATCA	1 cut(s)	880
Fnu4HI	GCNGC	4 cut(s)	86, 497, 633, 1515
FokI	GGATG	1 cut(s)	883
Fsp4HI	GCNGC	4 cut(s)	86, 497, 633, 1515
FspAI	RTGCGCAY	1 cut(s)	324
FspBI	CTAG	4 cut(s)	1070, 1118, 1469, 1523
FspI	TGCGCA	2 cut(s)	324, 857
GlaI	GCGC	4 cut(s)	324, 495, 857, 1019
GluI	GCNGC	4 cut(s)	86, 497, 633, 1515
GsuI	CTGGAG	1 cut(s)	906
HaeIII	GGCC	3 cut(s)	389, 401, 661
HapII	CCGG	4 cut(s)	140, 188, 654, 662
HgaI	GACGC	1 cut(s)	206
HhaI	GCGC	4 cut(s)	325, 496, 858, 1020
Hin1II	CATG	7 cut(s)	577, 599, 719, 862, 1013, 1283, 1561
Hin6I	GCGC	4 cut(s)	323, 494, 856, 1018
HinP1I	GCGC	4 cut(s)	323, 494, 856, 1018
HincII	GTYRAC	1 cut(s)	1369
HindII	GTYRAC	1 cut(s)	1369
HinfI	GANTC	4 cut(s)	119, 897, 926, 1604
HpaI	GTTAAC	1 cut(s)	1369
HpaII	CCGG	4 cut(s)	140, 188, 654, 662
HphI	GGTGA	7 cut(s)	87, 98, 128, 217, 448, 459, 548
Hpy166II	GTNNAC	2 cut(s)	106, 1369
Hpy188III	TCNNGA	7 cut(s)	313, 358, 645, 848, 923, 1382, 1435
Hpy8I	GTNNAC	2 cut(s)	106, 1369
HpyAV	CCTTC	4 cut(s)	65, 202, 452, 1176
HpyCH4III	ACNGT	7 cut(s)	116, 272, 394, 436, 514, 997, 1293
HpyF10VI	GCNNNNNNNGC	5 cut(s)	151, 197, 496, 1015, 1514
HpyF3I	CTNAG	8 cut(s)	606, 959, 1082, 1090, 1227, 1323, 1420, 1629
Hsp92II	CATG	7 cut(s)	577, 599, 719, 862, 1013, 1283, 1561
HspAI	GCGC	4 cut(s)	323, 494, 856, 1018
KroI	GCCGGC	2 cut(s)	187, 661
KroNI	GCCGGC	2 cut(s)	189, 663
Ksp22I	TGATCA	1 cut(s)	880
KspAI	GTTAAC	1 cut(s)	1369
Kzo9I	GATC	4 cut(s)	334, 850, 880, 1137
LguI	GCTCTTC	1 cut(s)	1409
LmnI	GCTCC	5 cut(s)	136, 142, 229, 605, 910
Lsp1109I	GCAGC	3 cut(s)	483, 619, 1526
LweI	GCATC	2 cut(s)	493, 619
MaeI	CTAG	4 cut(s)	1070, 1118, 1469, 1523
MaeIII	GTNAC	8 cut(s)	116, 508, 536, 550, 567, 1031, 1143, 1590
MalI	GATC	4 cut(s)	336, 852, 882, 1139
MboI	GATC	4 cut(s)	334, 850, 880, 1137
MlsI	TGGCCA	2 cut(s)	389, 401
MluCI	AATT	7 cut(s)	11, 235, 813, 822, 1103, 1259, 1438
MluNI	TGGCCA	2 cut(s)	389, 401
MlyI	GAGTC	2 cut(s)	113, 1613
Mox20I	TGGCCA	2 cut(s)	389, 401
MroNI	GCCGGC	2 cut(s)	187, 661
MscI	TGGCCA	2 cut(s)	389, 401
MseI	TTAA	6 cut(s)	669, 975, 1344, 1368, 1572, 1623
MslI	CAYNNNNRTG	3 cut(s)	720, 863, 1278
Msp20I	TGGCCA	2 cut(s)	389, 401
MspA1I	CMGCKG	1 cut(s)	1202
MspCI	CTTAAG	2 cut(s)	1571, 1622
MspI	CCGG	4 cut(s)	140, 188, 654, 662
MspR9I	CCNGG	1 cut(s)	386
Mva1269I	GAATGC	3 cut(s)	325, 624, 698
MvaI	CCWGG	1 cut(s)	386
MvnI	CGCG	1 cut(s)	200
MwoI	GCNNNNNNNGC	5 cut(s)	151, 197, 496, 1015, 1514
NaeI	GCCGGC	2 cut(s)	189, 663
NdeII	GATC	4 cut(s)	334, 850, 880, 1137
NgoMIV	GCCGGC	2 cut(s)	187, 661
NlaIII	CATG	7 cut(s)	577, 599, 719, 862, 1013, 1283, 1561
NlaIV	GGNNCC	9 cut(s)	138, 144, 186, 231, 409, 601, 809, 876, 912
NmuCI	GTSAC	6 cut(s)	116, 508, 536, 550, 567, 1143
NsbI	TGCGCA	2 cut(s)	324, 857
NspI	RCATGY	2 cut(s)	862, 1283
PciSI	GCTCTTC	1 cut(s)	1409
PctI	GAATGC	3 cut(s)	325, 624, 698
PdiI	GCCGGC	2 cut(s)	189, 663
PfeI	GAWTC	2 cut(s)	897, 926
PflMI	CCANNNNNTGG	1 cut(s)	818
PkrI	GCNGC	4 cut(s)	87, 498, 634, 1516
PleI	GAGTC	2 cut(s)	113, 1612
PpsI	GAGTC	2 cut(s)	113, 1612
PpuMI	RGGWCCY	1 cut(s)	875
PshBI	ATTAAT	1 cut(s)	1344
Psp5II	RGGWCCY	1 cut(s)	875
Psp6I	CCWGG	1 cut(s)	384
PspGI	CCWGG	1 cut(s)	384
PspN4I	GGNNCC	9 cut(s)	138, 144, 186, 231, 409, 601, 809, 876, 912
PspPI	GGNCC	2 cut(s)	659, 875
PspPPI	RGGWCCY	1 cut(s)	875
PvuII	CAGCTG	1 cut(s)	1202
RsaI	GTAC	4 cut(s)	269, 383, 1329, 1454
RsaNI	GTAC	4 cut(s)	268, 382, 1328, 1453
RseI	CAYNNNNRTG	3 cut(s)	720, 863, 1278
SapI	GCTCTTC	1 cut(s)	1409
SaqAI	TTAA	6 cut(s)	669, 975, 1344, 1368, 1572, 1623
SatI	GCNGC	4 cut(s)	86, 497, 633, 1515
Sau3AI	GATC	4 cut(s)	334, 850, 880, 1137
Sau96I	GGNCC	2 cut(s)	659, 875
SchI	GAGTC	2 cut(s)	113, 1613
ScrFI	CCNGG	1 cut(s)	386
SfaNI	GCATC	2 cut(s)	493, 619
SfcI	CTRYAG	1 cut(s)	1493
SinI	GGWCC	1 cut(s)	875
SmiMI	CAYNNNNRTG	3 cut(s)	720, 863, 1278
SmlI	CTYRAG	3 cut(s)	710, 1571, 1622
SmoI	CTYRAG	3 cut(s)	710, 1571, 1622
Sse9I	AATT	7 cut(s)	11, 235, 813, 822, 1103, 1259, 1438
SsiI	CCGC	4 cut(s)	39, 86, 174, 200
SspI	AATATT	2 cut(s)	979, 1348
SspMI	CTAG	4 cut(s)	1070, 1118, 1469, 1523
StyD4I	CCNGG	1 cut(s)	384
TaaI	ACNGT	7 cut(s)	116, 272, 394, 436, 514, 997, 1293
TaqI	TCGA	2 cut(s)	275, 1434
TasI	AATT	7 cut(s)	11, 235, 813, 822, 1103, 1259, 1438
TatI	WGTACW	1 cut(s)	267
TauI	GCSGC	1 cut(s)	88
TfiI	GAWTC	2 cut(s)	897, 926
Tru1I	TTAA	6 cut(s)	669, 975, 1344, 1368, 1572, 1623
Tru9I	TTAA	6 cut(s)	669, 975, 1344, 1368, 1572, 1623
TscAI	CASTG	3 cut(s)	397, 610, 1000
TseFI	GTSAC	6 cut(s)	116, 508, 536, 550, 567, 1143
TseI	GCWGC	3 cut(s)	496, 632, 1514
Tsp45I	GTSAC	6 cut(s)	116, 508, 536, 550, 567, 1143
TspDTI	ATGAA	7 cut(s)	4, 69, 212, 584, 732, 760, 1317
TspGWI	ACGGA	1 cut(s)	242
TspRI	CASTG	3 cut(s)	397, 610, 1000
Van91I	CCANNNNNTGG	1 cut(s)	818
Vha464I	CTTAAG	2 cut(s)	1571, 1622
VpaK11BI	GGWCC	1 cut(s)	875
VspI	ATTAAT	1 cut(s)	1344
XapI	RAATTY	2 cut(s)	235, 1103
XceI	RCATGY	2 cut(s)	862, 1283
XcmI	CCANNNNNNNNNTGG	2 cut(s)	610, 1052
XspI	CTAG	4 cut(s)	1070, 1118, 1469, 1523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.