Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001244

Physical Location & Seq

Genomic Coordinates Forward (+)

79671096 .. 79673883

Gene Structure 2788 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021974

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGTATCTCCAATTCATCAATCCCACAAGCACAACCACCACCCTAAATGACAACCTTCCCATCTCCAAGATAGTTTCTTCTTTGCCGCAACAATCACCACTTGTTGATCAAAACGGTGACTTGGGTGTTGTGTCGGAGCCGGAGCCGATGGTGCAGAGGTGGGAGGGTGGCGGTGGTGGTGGCGGGAGAGTGGTGCCGGCAATGGATGCGGTGGTGAAGGTGTTTTGTGTTCATACGGGGCCGAATTTCTCGTTGCCGTGGCAGAGGAAGAAGCAGTACAGTTCGAGTAGTAGTGGGTTTGTGATTGGGGGCAGGAGGGTCTTGACCAATGCGCATTCTGTGGATCATCATACACAGGTCAAGGTCAAGAAGCGTGGCTCTGACACCAAGTACTTGGCCACTGTGTTGGCCATTGGAACCGAGTGTGATATTGCCATGCTCACGGTGAGTGATGATGAGTTCTGGGAAGGGATTTCACCTGTGGAGTTTGGGAATTTGCCTGAGCTGCAAGATGCTGTGACTGTTGTGGGTTATCCTATAGGGGGTGACACAATCTCTGTGACAAGTGGTGTTGTGTCACGCATGGAGATACTTTCTTATGTTCATGGCTCCACTGAGCTTCTCGGAATGCAGATAGATGCTGCAATAAACTCTGGAAACTCTGGCGGGCCTGCTTTTAATGATAAGGGGAAATGTGTGGGGATTGCATTTCAGTCTCTCAAGCATGAAGATGTGGAAAATATAGGCTATGTCATACCAATACCAGTTATTATGCATTTCATTTTGGATTTTGACAAGAATGGGACATATACAGGGTTCCCAATTCTTGGAATTGAGTGGCAAAAGATGGAAAATCCTGATCTGCGCATGTCAATGGGGATGGGACCTGGTCAAAAGGGTGTGCGAATCAGAAGAATGGAGCCTACATCTCCAGAATCTCTTGTTCTGAAACCATCTGATGTTATTCTTAGCTTTGATGGGGTTAATATTGCTAATGATGGCACAGTTCCATTCAGGCATGGAGAGCGCATAGGTTTCAGTTACCTTGTCTCCCAAAAATACATTGGGGATAATGCTCTAATCAAAGTTCTAAGAAACTCAGAGACACTTGAATTCAACATAAAACTAGCAAAACACAAGGAACTGATCCCGTCACACATAGAGGGAAAACCTCCTTCTTATTACATCATTGCTGGATTTGTTTTCACAGCTGTATCTGTTCCATATCTGCGTTCTGAGTTTGGAAATATATTTGATGTTCCAATCAAATTATTGGACAAGCATTTACATGCAATGGCACAGTCTATTGATGAACAGCTTGTTGTTGTTTCTCAGGTACTTGTTGCTGACATTAATATTGGATATGAGGACATCGTTAACAATCAGGTTCTTGACTTCAATGGTAAGCCTGTGAAGAACCTGAAGAGCTTAGCCAAGATGGTCGAGAATTGTGATGACGAGTACCTAAAGTTTAGCCTAGAATATAATCAGATGGTTGTTCTACAGACAAAAACTGCCAAGGCAGCAACCCTAGATATCCTTACAACGCATTGCATATCTTCGTCCATGTCTGATGACCTTAAGACTAAAGACATTATGTTACAGGAAGTAGAGTCCTTGTCTGATGACCTTAAGACTAAGATATTAGAGGAAGAACAAATGCTTACTTCTCCTTTAGCTGTATCTACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009507 GO:0009536 GO:0016787 GO:0017171 GO:0019538 GO:0031974 GO:0031981 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_2 Trypsin_2

Protein Analysis

564

Amino Acids

61.72

Weight (kDa)

5.22

Isoelectric Point (pI)

46.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin	PF00089	83 - 261	7.4e-19	Trypsin
Trypsin_2	PF13365	98 - 235	3e-21	Trypsin-like peptidase domain
PDZ_3	PF17815	383 - 526	9.8e-45	PDZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40200
fragaria_vesca	FvH4_5g04990 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350
malus_domestica	MD06G1178100.v1.1 MD06G1178200.v1.1 MD09G1037000.v1.1 MD09G1037100.v1.1 MD14G1184600.v1.1 MD17G1038400.v1.1 MD17G1038500.v1.1
prunus_persica	Prupe.3G280500_v2.0.a1 Prupe.3G280600_v2.0.a1 Prupe.5G177300_v2.0.a1 Prupe.5G177300_v2.0.a1
pyrus_communis	pycom06g15840 pycom111g02980 pycom14g15360 pycom17g03470
rosa_chinensis	RchiOBHm_Chr1g0327041 RchiOBHm_Chr2g0170661 RchiOBHm_Chr2g0170671 RchiOBHm_Chr7g0194051
rosa_laevigata	RLG00000004221 RLG00000021973 RLG00000021974
rosa_multiflora	Rmu_sc0003787.1_g000010 Rmu_sc0003787.1_g000011 Rmu_sc0009433.1_g000001 Rmu_sc0023958.1_g000001 Rmu_sc0042111.1_g000001
rosa_roxburghii	Rroxscaffold_2G00081130 Rroxscaffold_2G00081140 Rroxscaffold_3G00261590
rosa_rugosa	Rorug02G0550300 Rorug07G0013500
rosa_samantha	Rh2AG623200 Rh2AG623300 Rh2BG633700 Rh2CG602900 Rh2CG603000 Rh2DG646500 Rh7AG140600 Rh7BG141300 Rh7CG144700 Rh7DG142000 Rh7DG324300
rosa_wichuraiana	Rw2G028950 Rw2G051610 Rw2G051620 Rw7G012010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	333, 866
AccB1I	GGYRCC	1 cut(s)	193
AccB7I	CCANNNNNTGG	1 cut(s)	827
AciI	CCGC	5 cut(s)	86, 171, 183, 209, 666
AclWI	GGATC	2 cut(s)	351, 1141
AcoI	YGGCCR	2 cut(s)	396, 408
AcsI	RAATTY	3 cut(s)	244, 493, 1112
AcuI	CTGAAG	1 cut(s)	1442
AfaI	GTAC	4 cut(s)	278, 392, 1338, 1463
AfiI	CCNNNNNNNGG	2 cut(s)	542, 827
AflII	CTTAAG	2 cut(s)	1580, 1631
AgsI	TTSAA	3 cut(s)	1112, 1117, 1399
AjnI	CCWGG	1 cut(s)	886
AluBI	AGCT	7 cut(s)	505, 619, 972, 1211, 1318, 1428, 1679
AluI	AGCT	7 cut(s)	505, 619, 972, 1211, 1318, 1428, 1679
Alw26I	GTCTC	3 cut(s)	720, 1054, 1097
AlwI	GGATC	2 cut(s)	351, 1141
AoxI	GGCC	4 cut(s)	239, 396, 408, 668
ApeKI	GCWGC	3 cut(s)	505, 641, 1523
ApoI	RAATTY	3 cut(s)	244, 493, 1112
AseI	ATTAAT	1 cut(s)	1353
AspLEI	GCGC	3 cut(s)	334, 867, 1029
AspS9I	GGNCC	3 cut(s)	239, 668, 884
AsuHPI	GGTGA	6 cut(s)	87, 128, 226, 457, 468, 557
AvaII	GGWCC	1 cut(s)	884
BaeI	ACNNNNGTAYC	2 cut(s)	1197, 1230
BalI	TGGCCA	2 cut(s)	398, 410
BanI	GGYRCC	1 cut(s)	193
BarI	GAAGNNNNNNTAC	2 cut(s)	260, 292
BbvI	GCAGC	3 cut(s)	492, 628, 1535
BccI	CCATC	9 cut(s)	68, 142, 841, 874, 961, 971, 992, 1432, 1486
BceAI	ACGGC	1 cut(s)	241
BciT130I	CCWGG	1 cut(s)	888
BclI	TGATCA	1 cut(s)	106
BcoDI	GTCTC	3 cut(s)	720, 1054, 1097
BfaI	CTAG	3 cut(s)	1127, 1478, 1532
BfmI	CTRYAG	2 cut(s)	537, 1502
BfrI	CTTAAG	2 cut(s)	1580, 1631
BisI	GCNGC	4 cut(s)	86, 506, 642, 1524
BlpI	GCTNAGC	1 cut(s)	1429
BlsI	GCNGC	4 cut(s)	87, 507, 643, 1525
BmcAI	AGTACT	1 cut(s)	392
Bme1390I	CCNGG	1 cut(s)	888
Bme18I	GGWCC	1 cut(s)	884
BmgT120I	GGNCC	3 cut(s)	239, 668, 884
BmiI	GGNNCC	9 cut(s)	138, 144, 195, 240, 418, 610, 818, 885, 921
BmrFI	CCNGG	1 cut(s)	888
BmsI	GCATC	3 cut(s)	196, 502, 628
BpmI	CTGGAG	1 cut(s)	915
Bpu10I	CCTNAGC	1 cut(s)	501
Bpu1102I	GCTNAGC	1 cut(s)	1429
BpuEI	CTTGAG	1 cut(s)	704
BsaJI	CCNNGG	2 cut(s)	257, 1518
BsaXI	ACNNNNNCTCC	2 cut(s)	1034, 1064
Bsc4I	CCNNNNNNNGG	2 cut(s)	542, 827
Bse118I	RCCGGY	1 cut(s)	196
Bse1I	ACTGG	1 cut(s)	764
Bse3DI	GCAATG	4 cut(s)	207, 1188, 1299, 1549
BseBI	CCWGG	1 cut(s)	888
BseDI	CCNNGG	2 cut(s)	257, 1518
BseGI	GGATG	2 cut(s)	211, 885
BseLI	CCNNNNNNNGG	2 cut(s)	542, 827
BseMI	GCAATG	4 cut(s)	207, 1188, 1299, 1549
BseMII	CTCAG	5 cut(s)	492, 606, 1113, 1227, 1346
BseNI	ACTGG	1 cut(s)	764
BseXI	GCAGC	3 cut(s)	492, 628, 1535
BsgI	GTGCAG	1 cut(s)	173
BshFI	GGCC	4 cut(s)	241, 398, 410, 670
BshNI	GGYRCC	1 cut(s)	193
BsiSI	CCGG	2 cut(s)	140, 197
BslFI	GGGAC	2 cut(s)	817, 897
BslI	CCNNNNNNNGG	2 cut(s)	542, 827
BsmAI	GTCTC	3 cut(s)	720, 1054, 1097
BsmFI	GGGAC	2 cut(s)	817, 897
BsmI	GAATGC	2 cut(s)	334, 633
BsnI	GGCC	4 cut(s)	241, 398, 410, 670
Bsp143I	GATC	4 cut(s)	106, 343, 859, 1146
Bsp1720I	GCTNAGC	1 cut(s)	1429
BspACI	CCGC	5 cut(s)	86, 171, 183, 209, 666
BspANI	GGCC	4 cut(s)	241, 398, 410, 670
BspCNI	CTCAG	5 cut(s)	493, 607, 1112, 1228, 1345
BspLI	GGNNCC	9 cut(s)	138, 144, 195, 240, 418, 610, 818, 885, 921
BspPI	GGATC	2 cut(s)	351, 1141
BspQI	GCTCTTC	1 cut(s)	1418
BspT107I	GGYRCC	1 cut(s)	193
BspTI	CTTAAG	2 cut(s)	1580, 1631
BsrDI	GCAATG	4 cut(s)	207, 1188, 1299, 1549
BsrFI	RCCGGY	1 cut(s)	196
BsrI	ACTGG	1 cut(s)	764
BssAI	RCCGGY	1 cut(s)	196
BssECI	CCNNGG	2 cut(s)	257, 1518
BssMI	GATC	4 cut(s)	106, 343, 859, 1146
BssT1I	CCWWGG	1 cut(s)	1518
Bst2UI	CCWGG	1 cut(s)	888
Bst4CI	ACNGT	7 cut(s)	116, 281, 403, 445, 523, 1006, 1302
Bst6I	CTCTTC	1 cut(s)	1418
BstAFI	CTTAAG	2 cut(s)	1580, 1631
BstAPI	GCANNNNNTGC	1 cut(s)	206
BstC8I	GCNNGC	3 cut(s)	198, 668, 672
BstDEI	CTNAG	9 cut(s)	501, 615, 968, 1091, 1099, 1236, 1332, 1429, 1638
BstDSI	CCRYGG	1 cut(s)	257
BstF5I	GGATG	2 cut(s)	211, 885
BstHHI	GCGC	3 cut(s)	334, 867, 1029
BstKTI	GATC	4 cut(s)	109, 346, 862, 1149
BstMAI	GTCTC	3 cut(s)	720, 1054, 1097
BstMBI	GATC	4 cut(s)	106, 343, 859, 1146
BstMWI	GCNNNNNNNGC	5 cut(s)	151, 206, 505, 1024, 1523
BstNI	CCWGG	1 cut(s)	888
BstNSI	RCATGY	2 cut(s)	871, 1292
BstSCI	CCNGG	1 cut(s)	886
BstSFI	CTRYAG	2 cut(s)	537, 1502
BstV1I	GCAGC	3 cut(s)	492, 628, 1535
BstXI	CCANNNNNNTGG	2 cut(s)	394, 406
BsuRI	GGCC	4 cut(s)	241, 398, 410, 670
BtgI	CCRYGG	1 cut(s)	257
BtsCI	GGATG	2 cut(s)	211, 885
BtsIMutI	CAGTG	2 cut(s)	399, 612
Cac8I	GCNNGC	3 cut(s)	198, 668, 672
CfoI	GCGC	3 cut(s)	334, 867, 1029
Cfr10I	RCCGGY	1 cut(s)	196
Cfr13I	GGNCC	3 cut(s)	239, 668, 884
CsiI	ACCWGGT	1 cut(s)	886
Csp6I	GTAC	4 cut(s)	277, 391, 1337, 1462
CspCI	CAANNNNNGTGG	2 cut(s)	355, 390
CviAII	CATG	8 cut(s)	436, 583, 605, 725, 868, 1019, 1289, 1567
CviQI	GTAC	4 cut(s)	277, 391, 1337, 1462
DdeI	CTNAG	9 cut(s)	501, 615, 968, 1091, 1099, 1236, 1332, 1429, 1638
DpnI	GATC	4 cut(s)	108, 345, 861, 1148
DpnII	GATC	4 cut(s)	106, 343, 859, 1146
EaeI	YGGCCR	2 cut(s)	396, 408
Eam1104I	CTCTTC	1 cut(s)	1418
EarI	CTCTTC	1 cut(s)	1418
Eco130I	CCWWGG	1 cut(s)	1518
Eco32I	GATATC	1 cut(s)	1537
Eco47I	GGWCC	1 cut(s)	884
Eco57I	CTGAAG	1 cut(s)	1442
EcoO109I	RGGNCCY	1 cut(s)	884
EcoRI	GAATTC	1 cut(s)	1112
EcoRII	CCWGG	1 cut(s)	886
EcoRV	GATATC	1 cut(s)	1537
EcoT14I	CCWWGG	1 cut(s)	1518
EcoT22I	ATGCAT	1 cut(s)	777
ErhI	CCWWGG	1 cut(s)	1518
FaeI	CATG	8 cut(s)	439, 586, 608, 728, 871, 1022, 1292, 1570
FaqI	GGGAC	2 cut(s)	817, 897
FatI	CATG	8 cut(s)	435, 582, 604, 724, 867, 1018, 1288, 1566
FauI	CCCGC	2 cut(s)	176, 659
FbaI	TGATCA	1 cut(s)	106
Fnu4HI	GCNGC	4 cut(s)	86, 506, 642, 1524
FokI	GGATG	2 cut(s)	218, 892
Fsp4HI	GCNGC	4 cut(s)	86, 506, 642, 1524
FspAI	RTGCGCAY	1 cut(s)	333
FspBI	CTAG	3 cut(s)	1127, 1478, 1532
FspI	TGCGCA	2 cut(s)	333, 866
GlaI	GCGC	3 cut(s)	333, 866, 1028
GluI	GCNGC	4 cut(s)	86, 506, 642, 1524
GsuI	CTGGAG	1 cut(s)	915
HaeIII	GGCC	4 cut(s)	241, 398, 410, 670
HapII	CCGG	2 cut(s)	140, 197
HhaI	GCGC	3 cut(s)	334, 867, 1029
Hin1II	CATG	8 cut(s)	439, 586, 608, 728, 871, 1022, 1292, 1570
Hin6I	GCGC	3 cut(s)	332, 865, 1027
HinP1I	GCGC	3 cut(s)	332, 865, 1027
HincII	GTYRAC	1 cut(s)	1378
HindII	GTYRAC	1 cut(s)	1378
HinfI	GANTC	3 cut(s)	906, 935, 1613
HpaI	GTTAAC	1 cut(s)	1378
HpaII	CCGG	2 cut(s)	140, 197
HphI	GGTGA	6 cut(s)	87, 128, 226, 457, 468, 557
Hpy166II	GTNNAC	1 cut(s)	1378
Hpy188III	TCNNGA	7 cut(s)	322, 367, 654, 857, 932, 1391, 1444
Hpy8I	GTNNAC	1 cut(s)	1378
HpyAV	CCTTC	4 cut(s)	65, 211, 461, 1185
HpyCH4III	ACNGT	7 cut(s)	116, 281, 403, 445, 523, 1006, 1302
HpyCH4V	TGCA	8 cut(s)	154, 508, 631, 644, 707, 775, 1292, 1554
HpyF10VI	GCNNNNNNNGC	5 cut(s)	151, 206, 505, 1024, 1523
HpyF3I	CTNAG	9 cut(s)	501, 615, 968, 1091, 1099, 1236, 1332, 1429, 1638
Hsp92II	CATG	8 cut(s)	439, 586, 608, 728, 871, 1022, 1292, 1570
HspAI	GCGC	3 cut(s)	332, 865, 1027
KroI	GCCGGC	1 cut(s)	196
KroNI	GCCGGC	1 cut(s)	198
Ksp22I	TGATCA	1 cut(s)	106
KspAI	GTTAAC	1 cut(s)	1378
Kzo9I	GATC	4 cut(s)	106, 343, 859, 1146
LguI	GCTCTTC	1 cut(s)	1418
LmnI	GCTCC	4 cut(s)	136, 142, 614, 919
Lsp1109I	GCAGC	3 cut(s)	492, 628, 1535
LweI	GCATC	3 cut(s)	196, 502, 628
MabI	ACCWGGT	1 cut(s)	886
MaeI	CTAG	3 cut(s)	1127, 1478, 1532
MaeIII	GTNAC	8 cut(s)	116, 517, 545, 559, 576, 1040, 1152, 1599
MalI	GATC	4 cut(s)	108, 345, 861, 1148
MboI	GATC	4 cut(s)	106, 343, 859, 1146
MboII	GAAGA	8 cut(s)	69, 280, 740, 924, 1426, 1435, 1551, 1664
MlsI	TGGCCA	2 cut(s)	398, 410
MluCI	AATT	8 cut(s)	11, 244, 493, 822, 831, 1112, 1268, 1447
MluNI	TGGCCA	2 cut(s)	398, 410
MlyI	GAGTC	1 cut(s)	1622
MmeI	TCCRAC	1 cut(s)	114
MnlI	CCTC	8 cut(s)	150, 157, 258, 309, 1156, 1182, 1360, 1642
Mox20I	TGGCCA	2 cut(s)	398, 410
Mph1103I	ATGCAT	1 cut(s)	777
MroNI	GCCGGC	1 cut(s)	196
MscI	TGGCCA	2 cut(s)	398, 410
MseI	TTAA	6 cut(s)	678, 984, 1353, 1377, 1581, 1632
MslI	CAYNNNNRTG	3 cut(s)	729, 872, 1287
Msp20I	TGGCCA	2 cut(s)	398, 410
MspA1I	CMGCKG	1 cut(s)	1211
MspCI	CTTAAG	2 cut(s)	1580, 1631
MspI	CCGG	2 cut(s)	140, 197
MspR9I	CCNGG	1 cut(s)	888
Mva1269I	GAATGC	2 cut(s)	334, 633
MvaI	CCWGG	1 cut(s)	888
MwoI	GCNNNNNNNGC	5 cut(s)	151, 206, 505, 1024, 1523
NaeI	GCCGGC	1 cut(s)	198
NdeII	GATC	4 cut(s)	106, 343, 859, 1146
NgoMIV	GCCGGC	1 cut(s)	196
NlaIII	CATG	8 cut(s)	439, 586, 608, 728, 871, 1022, 1292, 1570
NlaIV	GGNNCC	9 cut(s)	138, 144, 195, 240, 418, 610, 818, 885, 921
NmuCI	GTSAC	6 cut(s)	116, 517, 545, 559, 576, 1152
NsbI	TGCGCA	2 cut(s)	333, 866
NsiI	ATGCAT	1 cut(s)	777
NspI	RCATGY	2 cut(s)	871, 1292
PciSI	GCTCTTC	1 cut(s)	1418
PctI	GAATGC	2 cut(s)	334, 633
PdiI	GCCGGC	1 cut(s)	198
PfeI	GAWTC	2 cut(s)	906, 935
PflFI	GACNNNGTC	1 cut(s)	888
PflMI	CCANNNNNTGG	1 cut(s)	827
PkrI	GCNGC	4 cut(s)	87, 507, 643, 1525
PleI	GAGTC	1 cut(s)	1621
PpsI	GAGTC	1 cut(s)	1621
PpuMI	RGGWCCY	1 cut(s)	884
PshBI	ATTAAT	1 cut(s)	1353
Psp5II	RGGWCCY	1 cut(s)	884
Psp6I	CCWGG	1 cut(s)	886
PspGI	CCWGG	1 cut(s)	886
PspN4I	GGNNCC	9 cut(s)	138, 144, 195, 240, 418, 610, 818, 885, 921
PspPI	GGNCC	3 cut(s)	239, 668, 884
PspPPI	RGGWCCY	1 cut(s)	884
PsyI	GACNNNGTC	1 cut(s)	888
PvuII	CAGCTG	1 cut(s)	1211
RsaI	GTAC	4 cut(s)	278, 392, 1338, 1463
RsaNI	GTAC	4 cut(s)	277, 391, 1337, 1462
RseI	CAYNNNNRTG	3 cut(s)	729, 872, 1287
SapI	GCTCTTC	1 cut(s)	1418
SaqAI	TTAA	6 cut(s)	678, 984, 1353, 1377, 1581, 1632
SatI	GCNGC	4 cut(s)	86, 506, 642, 1524
Sau3AI	GATC	4 cut(s)	106, 343, 859, 1146
Sau96I	GGNCC	3 cut(s)	239, 668, 884
ScaI	AGTACT	1 cut(s)	392
SchI	GAGTC	1 cut(s)	1622
ScrFI	CCNGG	1 cut(s)	888
SexAI	ACCWGGT	1 cut(s)	886
SfaNI	GCATC	3 cut(s)	196, 502, 628
SfcI	CTRYAG	2 cut(s)	537, 1502
SinI	GGWCC	1 cut(s)	884
SmiMI	CAYNNNNRTG	3 cut(s)	729, 872, 1287
SmlI	CTYRAG	3 cut(s)	719, 1580, 1631
SmoI	CTYRAG	3 cut(s)	719, 1580, 1631
Sse9I	AATT	8 cut(s)	11, 244, 493, 822, 831, 1112, 1268, 1447
SsiI	CCGC	5 cut(s)	86, 171, 183, 209, 666
SspI	AATATT	2 cut(s)	988, 1357
SspMI	CTAG	3 cut(s)	1127, 1478, 1532
StyD4I	CCNGG	1 cut(s)	886
StyI	CCWWGG	1 cut(s)	1518
TaaI	ACNGT	7 cut(s)	116, 281, 403, 445, 523, 1006, 1302
TaqI	TCGA	2 cut(s)	284, 1443
TasI	AATT	8 cut(s)	11, 244, 493, 822, 831, 1112, 1268, 1447
TatI	WGTACW	2 cut(s)	276, 390
TauI	GCSGC	1 cut(s)	88
TfiI	GAWTC	2 cut(s)	906, 935
Tru1I	TTAA	6 cut(s)	678, 984, 1353, 1377, 1581, 1632
Tru9I	TTAA	6 cut(s)	678, 984, 1353, 1377, 1581, 1632
TscAI	CASTG	2 cut(s)	406, 619
TseFI	GTSAC	6 cut(s)	116, 517, 545, 559, 576, 1152
TseI	GCWGC	3 cut(s)	505, 641, 1523
Tsp45I	GTSAC	6 cut(s)	116, 517, 545, 559, 576, 1152
TspDTI	ATGAA	6 cut(s)	4, 221, 593, 741, 769, 1326
TspRI	CASTG	2 cut(s)	406, 619
Tth111I	GACNNNGTC	1 cut(s)	888
Van91I	CCANNNNNTGG	1 cut(s)	827
Vha464I	CTTAAG	2 cut(s)	1580, 1631
VpaK11BI	GGWCC	1 cut(s)	884
VspI	ATTAAT	1 cut(s)	1353
XapI	RAATTY	3 cut(s)	244, 493, 1112
XceI	RCATGY	2 cut(s)	871, 1292
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1061
XspI	CTAG	3 cut(s)	1127, 1478, 1532
ZrmI	AGTACT	1 cut(s)	392
Zsp2I	ATGCAT	1 cut(s)	777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.