Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001244

Physical Location & Seq

Genomic Coordinates Reverse (-)

10465990 .. 10470025

Gene Structure 4036 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG141300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGGCGACAACAAGCGAAAGCGAGGCCGTAAGCCCAAAACCCCCACCCCCGAAACCCTAGCCACCACAACCGCATCCCCACCAACAACCACATCCGCCGCAGACGACGATGACGACGCCGTTTTCTCAGTCAGCAACGTCGAGATAATCGACCCCAAATGCCCCCGCCGCGGCCGCGGCCGCCCCAAGAAGCTCCTGAAGCTCTCCGAAAACGGCGACCACGACCCGCCCGCCCCGGCCGATTCGGATCCCGGAACGGCCTGGGAGGGCGGGGCGAGGGTGGTGCCGTCGATGGACGCGGTGGTGAAGGTGTTCTGCACGCACACCGAGCCGAATTTCTCGCTGCCGTGGCAGCGAAAGAGGCAGTACAGCTCGAGCAGCAGTGGGTTTGTGATTGGCGGCAGGAGGGTGCTCACCAATGCTCACTCAGTGGAGCATTACACCCAGGTCAAGCTCAAGAAGCGCGGCTCCGATACCAAGTACTTGGCCACTGTTCTTGCTATTGGCACCGAGTGTGACATTGCAATGCTTACGGTTGATGATGATGAGTTTTGGGAAGGTGTCTCACCGGTGGAGTTTGGGGAGTTGCCTGCGCTGCAAGATGCTGTTACTGTCGTGGGTTATCCGATTGGGGGAGACACAATTTCAGTGACGAGTGGCGTTGTATCGCGGATAGAGATTCTGTCGTATGTTCATGGGTCAACTGAACTGCTAGGTTTGCAGATAGATGCTGCGATCAACTCTGGAAACTCGGGTGGGCCTGCTTTTAATGATAAAGGAACTTGTGTGGGTATTGCATTTCAGTCCCTAAAACATGAGGATGCAGAGAATATTGGTTATGTCATACCCACACCAGTAATAATGCACTTCATCAAAGATTATGAGAAGAATGGAGCATATACAGGATTTCCAATTCTTGGGATTGAGTGGCAGAAAATGGAAAATCCTGATTTGCGTACATCAATGGGCATGAAACCTGATCAAAAGGGTGTTCGTATCAGAAGAATTGATCCCACTGCTCTGGAATCTCAGGTTTTGAAGCCATCTGATATTCTTCTCAGCTTTGATGGAGTTAATATTGCCAATGATGGAACAGTTCCTTTTCGGCATGGAGAACGCATAGGTTTTAGTTACCTCATATCCCAGAAATATACTGGGGATAACTCAAAGGTTAAAGTTCTGCGCAATTCTGAGATTCTCAGTTTTGATATAAAACTTGCATCCCACAAAAGACTAATTCCAGCACACATCAAGGGCAGACCTCCTTCATATTATATTGTTGCAGGATTTGTTTTCACAGCTGTATCTGTTCCCTATCTTCGATCCGAGTATGGAAAGGATTATGAGTTTGAAGCTCCTGTCAAACTTTTGGACAAAATGCTGCATTCCTTGCGGCAGTCACCGGATGAGCAGCTTGTAGTGGTTTCTCAGGTGCTTGTGGCTGATATCAACATTGGGTATGAAGACATAGTTAACACGCAGATTCTTGCTTTTAATGGTAAGCCTGTGAAGAATCTAAAAAGCTTGGCCAGCATGGTAGAGAACTGTGAGGATGAGTTTTTGAAATTTGATTTAGAATACCAACAGATGGCAGTCCTCCGAACAAATACTGCAAAAGCAGCTACCCTAGATATTCTTGCTACACACTGCATACCGTCAGCAATGTCCGATGATTTGAAGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009507 GO:0009536 GO:0016787 GO:0017171 GO:0019538 GO:0031974 GO:0031981 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_2 Trypsin_2

Protein Analysis

561

Amino Acids

61.5

Weight (kDa)

5.91

Isoelectric Point (pI)

43.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin	PF00089	110 - 290	4.5e-19	Trypsin
Trypsin_2	PF13365	128 - 265	1.6e-20	Trypsin-like peptidase domain
PDZ_3	PF17815	413 - 558	3e-48	PDZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40200
fragaria_vesca	FvH4_5g04990 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350
malus_domestica	MD06G1178100.v1.1 MD06G1178200.v1.1 MD09G1037000.v1.1 MD09G1037100.v1.1 MD14G1184600.v1.1 MD17G1038400.v1.1 MD17G1038500.v1.1
prunus_persica	Prupe.3G280500_v2.0.a1 Prupe.3G280600_v2.0.a1 Prupe.5G177300_v2.0.a1 Prupe.5G177300_v2.0.a1
pyrus_communis	pycom06g15840 pycom111g02980 pycom14g15360 pycom17g03470
rosa_chinensis	RchiOBHm_Chr1g0327041 RchiOBHm_Chr2g0170661 RchiOBHm_Chr2g0170671 RchiOBHm_Chr7g0194051
rosa_laevigata	RLG00000004221 RLG00000021973 RLG00000021974
rosa_multiflora	Rmu_sc0003787.1_g000010 Rmu_sc0003787.1_g000011 Rmu_sc0009433.1_g000001 Rmu_sc0023958.1_g000001 Rmu_sc0042111.1_g000001
rosa_roxburghii	Rroxscaffold_2G00081130 Rroxscaffold_2G00081140 Rroxscaffold_3G00261590
rosa_rugosa	Rorug02G0550300 Rorug07G0013500
rosa_samantha	Rh2AG623200 Rh2AG623300 Rh2BG633700 Rh2CG602900 Rh2CG603000 Rh2DG646500 Rh7AG140600 Rh7BG141300 Rh7CG144700 Rh7DG142000 Rh7DG324300
rosa_wichuraiana	Rw2G028950 Rw2G051610 Rw2G051620 Rw7G012010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1184
AccB1I	GGYRCC	2 cut(s)	283, 506
AccB7I	CCANNNNNTGG	2 cut(s)	917, 1588
AccII	CGCG	5 cut(s)	171, 177, 299, 465, 670
AclWI	GGATC	4 cut(s)	242, 255, 1004, 1317
AcoI	YGGCCR	5 cut(s)	172, 178, 237, 486, 1527
AcsI	RAATTY	2 cut(s)	334, 1565
AcuI	CTGAAG	1 cut(s)	218
AcyI	GRCGYC	1 cut(s)	117
AdeI	CACNNNGTG	2 cut(s)	430, 513
AfaI	GTAC	3 cut(s)	368, 482, 958
AfiI	CCNNNNNNNGG	4 cut(s)	170, 632, 917, 1588
AgeI	ACCGGT	1 cut(s)	568
AgsI	TTSAA	4 cut(s)	1039, 1352, 1564, 1678
AjnI	CCWGG	2 cut(s)	260, 444
Alw21I	GWGCWC	1 cut(s)	414
Alw26I	GTCTC	2 cut(s)	568, 630
AlwI	GGATC	4 cut(s)	242, 255, 1004, 1317
Ama87I	CYCGRG	2 cut(s)	373, 751
AoxI	GGCC	8 cut(s)	25, 172, 178, 237, 258, 486, 758, 1527
ApeKI	GCWGC	8 cut(s)	343, 352, 378, 595, 731, 1381, 1411, 1619
ApoI	RAATTY	2 cut(s)	334, 1565
AsiGI	ACCGGT	1 cut(s)	568
Asp700I	GAANNNNTTC	1 cut(s)	311
AspLEI	GCGC	3 cut(s)	465, 595, 1185
AspS9I	GGNCC	1 cut(s)	758
AsuC2I	CCSGG	2 cut(s)	236, 252
AsuHPI	GGTGA	4 cut(s)	316, 406, 558, 1392
AvaI	CYCGRG	2 cut(s)	373, 751
BaeI	ACNNNNGTAYC	2 cut(s)	1287, 1320
BalI	TGGCCA	2 cut(s)	488, 1529
BamHI	GGATCC	1 cut(s)	247
BanI	GGYRCC	2 cut(s)	283, 506
BbsI	GAAGAC	1 cut(s)	1470
Bbv12I	GWGCWC	1 cut(s)	414
BbvI	GCAGC	8 cut(s)	330, 364, 390, 582, 718, 1368, 1423, 1631
BccI	CCATC	5 cut(s)	286, 1051, 1061, 1082, 1582
BceAI	ACGGC	6 cut(s)	12, 104, 229, 271, 273, 331
BcgI	CGANNNNNNTGC	2 cut(s)	265, 299
BciT130I	CCWGG	2 cut(s)	262, 446
BclI	TGATCA	1 cut(s)	979
BcnI	CCSGG	2 cut(s)	236, 252
BcoDI	GTCTC	2 cut(s)	568, 630
BfaI	CTAG	3 cut(s)	59, 713, 1628
BmcAI	AGTACT	1 cut(s)	482
Bme1390I	CCNGG	4 cut(s)	236, 252, 262, 446
BmeT110I	CYCGRG	2 cut(s)	373, 751
BmgT120I	GGNCC	1 cut(s)	758
BmiI	GGNNCC	4 cut(s)	249, 285, 469, 508
BmrFI	CCNGG	4 cut(s)	236, 252, 262, 446
BmrI	ACTGGG	1 cut(s)	1164
BmsI	GCATC	5 cut(s)	83, 592, 718, 811, 1229
BmuI	ACTGGG	1 cut(s)	1164
BpiI	GAAGAC	1 cut(s)	1470
BpuEI	CTTGAG	1 cut(s)	440
BpuMI	CCSGG	2 cut(s)	236, 252
BsaBI	GATNNNNATC	1 cut(s)	246
BsaHI	GRCGYC	1 cut(s)	117
BsaJI	CCNNGG	6 cut(s)	169, 175, 234, 261, 347, 444
BsaWI	WCCGGW	2 cut(s)	568, 1402
Bsc4I	CCNNNNNNNGG	4 cut(s)	170, 632, 917, 1588
Bse118I	RCCGGY	1 cut(s)	568
Bse1I	ACTGG	2 cut(s)	854, 1159
Bse3DI	GCAATG	3 cut(s)	519, 531, 1668
Bse8I	GATNNNNATC	1 cut(s)	246
BseBI	CCWGG	2 cut(s)	262, 446
BseDI	CCNNGG	6 cut(s)	169, 175, 234, 261, 347, 444
BseGI	GGATG	6 cut(s)	74, 92, 826, 1220, 1411, 1558
BseJI	GATNNNNATC	1 cut(s)	246
BseLI	CCNNNNNNNGG	4 cut(s)	170, 632, 917, 1588
BseMI	GCAATG	3 cut(s)	519, 531, 1668
BseMII	CTCAG	7 cut(s)	141, 441, 1043, 1072, 1182, 1213, 1442
BseNI	ACTGG	2 cut(s)	854, 1159
BseX3I	CGGCCG	3 cut(s)	172, 178, 237
BseXI	GCAGC	8 cut(s)	330, 364, 390, 582, 718, 1368, 1423, 1631
BsgI	GTGCAG	1 cut(s)	301
Bsh1236I	CGCG	5 cut(s)	171, 177, 299, 465, 670
Bsh1285I	CGRYCG	3 cut(s)	175, 181, 240
BshFI	GGCC	8 cut(s)	27, 174, 180, 239, 260, 488, 760, 1529
BshNI	GGYRCC	2 cut(s)	283, 506
BshTI	ACCGGT	1 cut(s)	568
BsiEI	CGRYCG	3 cut(s)	175, 181, 240
BsiHKAI	GWGCWC	1 cut(s)	414
BsiHKCI	CYCGRG	2 cut(s)	373, 751
BsiSI	CCGG	4 cut(s)	236, 252, 569, 1403
BslFI	GGGAC	1 cut(s)	790
BslI	CCNNNNNNNGG	4 cut(s)	170, 632, 917, 1588
BsmAI	GTCTC	2 cut(s)	568, 630
BsmFI	GGGAC	1 cut(s)	790
BsmI	GAATGC	1 cut(s)	1384
BsnI	GGCC	8 cut(s)	27, 174, 180, 239, 260, 488, 760, 1529
BsoBI	CYCGRG	2 cut(s)	373, 751
Bsp1286I	GDGCHC	1 cut(s)	414
Bsp143I	GATC	5 cut(s)	247, 735, 979, 1009, 1322
BspANI	GGCC	8 cut(s)	27, 174, 180, 239, 260, 488, 760, 1529
BspCNI	CTCAG	7 cut(s)	140, 440, 1042, 1071, 1183, 1212, 1441
BspFNI	CGCG	5 cut(s)	171, 177, 299, 465, 670
BspLI	GGNNCC	4 cut(s)	249, 285, 469, 508
BspPI	GGATC	4 cut(s)	242, 255, 1004, 1317
BspT107I	GGYRCC	2 cut(s)	283, 506
BsrDI	GCAATG	3 cut(s)	519, 531, 1668
BsrFI	RCCGGY	1 cut(s)	568
BsrI	ACTGG	2 cut(s)	854, 1159
BssAI	RCCGGY	1 cut(s)	568
BssECI	CCNNGG	6 cut(s)	169, 175, 234, 261, 347, 444
BssMI	GATC	5 cut(s)	247, 735, 979, 1009, 1322
BssNI	GRCGYC	1 cut(s)	117
Bst2UI	CCWGG	2 cut(s)	262, 446
Bst4CI	ACNGT	6 cut(s)	493, 535, 613, 1096, 1547, 1656
BstACI	GRCGYC	1 cut(s)	117
BstAPI	GCANNNNNTGC	1 cut(s)	1390
BstC8I	GCNNGC	5 cut(s)	231, 320, 591, 762, 1531
BstDEI	CTNAG	7 cut(s)	127, 427, 1029, 1058, 1191, 1199, 1428
BstDSI	CCRYGG	3 cut(s)	169, 175, 347
BstF5I	GGATG	6 cut(s)	74, 92, 826, 1220, 1411, 1558
BstFNI	CGCG	5 cut(s)	171, 177, 299, 465, 670
BstHHI	GCGC	3 cut(s)	465, 595, 1185
BstKTI	GATC	5 cut(s)	250, 738, 982, 1012, 1325
BstMAI	GTCTC	2 cut(s)	568, 630
BstMBI	GATC	5 cut(s)	247, 735, 979, 1009, 1322
BstMCI	CGRYCG	3 cut(s)	175, 181, 240
BstNI	CCWGG	2 cut(s)	262, 446
BstSCI	CCNGG	4 cut(s)	234, 250, 260, 444
BstUI	CGCG	5 cut(s)	171, 177, 299, 465, 670
BstV1I	GCAGC	8 cut(s)	330, 364, 390, 582, 718, 1368, 1423, 1631
BstV2I	GAAGAC	1 cut(s)	1470
BstX2I	RGATCY	1 cut(s)	247
BstXI	CCANNNNNNTGG	2 cut(s)	484, 1021
BstYI	RGATCY	1 cut(s)	247
BstZI	CGGCCG	3 cut(s)	172, 178, 237
BsuRI	GGCC	8 cut(s)	27, 174, 180, 239, 260, 488, 760, 1529
BtgI	CCRYGG	3 cut(s)	169, 175, 347
BtsCI	GGATG	6 cut(s)	74, 92, 826, 1220, 1411, 1558
BtsI	GCAGTG	3 cut(s)	388, 1014, 1645
BtsIMutI	CAGTG	6 cut(s)	388, 435, 489, 654, 1014, 1645
Cac8I	GCNNGC	5 cut(s)	231, 320, 591, 762, 1531
CciNI	GCGGCCGC	2 cut(s)	172, 178
CfoI	GCGC	3 cut(s)	465, 595, 1185
Cfr10I	RCCGGY	1 cut(s)	568
Cfr13I	GGNCC	1 cut(s)	758
Cfr42I	CCGCGG	2 cut(s)	172, 178
CseI	GACGC	2 cut(s)	125, 305
Csp6I	GTAC	3 cut(s)	367, 481, 957
CspAI	ACCGGT	1 cut(s)	568
CspCI	CAANNNNNGTGG	2 cut(s)	478, 513
CviAII	CATG	5 cut(s)	695, 815, 970, 1109, 1534
CviQI	GTAC	3 cut(s)	367, 481, 957
DdeI	CTNAG	7 cut(s)	127, 427, 1029, 1058, 1191, 1199, 1428
DpnI	GATC	5 cut(s)	249, 737, 981, 1011, 1324
DpnII	GATC	5 cut(s)	247, 735, 979, 1009, 1322
DraIII	CACNNNGTG	2 cut(s)	430, 513
EaeI	YGGCCR	5 cut(s)	172, 178, 237, 486, 1527
EagI	CGGCCG	3 cut(s)	172, 178, 237
EciI	GGCGGA	1 cut(s)	85
EclXI	CGGCCG	3 cut(s)	172, 178, 237
Eco32I	GATATC	1 cut(s)	1447
Eco52I	CGGCCG	3 cut(s)	172, 178, 237
Eco57I	CTGAAG	1 cut(s)	218
Eco88I	CYCGRG	2 cut(s)	373, 751
EcoRII	CCWGG	2 cut(s)	260, 444
EcoRV	GATATC	1 cut(s)	1447
FaeI	CATG	5 cut(s)	698, 818, 973, 1112, 1537
FaqI	GGGAC	1 cut(s)	790
FatI	CATG	5 cut(s)	694, 814, 969, 1108, 1533
FauI	CCCGC	4 cut(s)	173, 234, 238, 263
FbaI	TGATCA	1 cut(s)	979
FokI	GGATG	6 cut(s)	61, 79, 833, 1207, 1418, 1565
FspBI	CTAG	3 cut(s)	59, 713, 1628
FspI	TGCGCA	1 cut(s)	1184
GlaI	GCGC	3 cut(s)	464, 594, 1184
HaeIII	GGCC	8 cut(s)	27, 174, 180, 239, 260, 488, 760, 1529
HapII	CCGG	4 cut(s)	236, 252, 569, 1403
HgaI	GACGC	2 cut(s)	125, 305
HhaI	GCGC	3 cut(s)	465, 595, 1185
Hin1I	GRCGYC	1 cut(s)	117
Hin1II	CATG	5 cut(s)	698, 818, 973, 1112, 1537
Hin6I	GCGC	3 cut(s)	463, 593, 1183
HinP1I	GCGC	3 cut(s)	463, 593, 1183
HincII	GTYRAC	2 cut(s)	702, 1474
HindII	GTYRAC	2 cut(s)	702, 1474
HindIII	AAGCTT	1 cut(s)	1522
HinfI	GANTC	6 cut(s)	242, 679, 1025, 1195, 1483, 1513
HpaI	GTTAAC	1 cut(s)	1474
HpaII	CCGG	4 cut(s)	236, 252, 569, 1403
HphI	GGTGA	4 cut(s)	316, 406, 558, 1392
Hpy166II	GTNNAC	2 cut(s)	702, 1474
Hpy188III	TCNNGA	6 cut(s)	142, 196, 457, 744, 947, 1022
Hpy8I	GTNNAC	2 cut(s)	702, 1474
Hpy99I	CGWCG	4 cut(s)	110, 119, 143, 292
HpyAV	CCTTC	3 cut(s)	301, 551, 1275
HpyCH4III	ACNGT	6 cut(s)	493, 535, 613, 1096, 1547, 1656
HpyCH4IV	ACGT	1 cut(s)	138
HpyF3I	CTNAG	7 cut(s)	127, 427, 1029, 1058, 1191, 1199, 1428
HpySE526I	ACGT	1 cut(s)	138
Hsp92I	GRCGYC	1 cut(s)	117
Hsp92II	CATG	5 cut(s)	698, 818, 973, 1112, 1537
HspAI	GCGC	3 cut(s)	463, 593, 1183
Ksp22I	TGATCA	1 cut(s)	979
KspAI	GTTAAC	1 cut(s)	1474
KspI	CCGCGG	2 cut(s)	172, 178
Kzo9I	GATC	5 cut(s)	247, 735, 979, 1009, 1322
LmnI	GCTCC	5 cut(s)	198, 433, 473, 893, 1360
Lsp1109I	GCAGC	8 cut(s)	330, 364, 390, 582, 718, 1368, 1423, 1631
LweI	GCATC	5 cut(s)	83, 592, 718, 811, 1229
MaeI	CTAG	3 cut(s)	59, 713, 1628
MaeII	ACGT	1 cut(s)	138
MaeIII	GTNAC	5 cut(s)	515, 607, 649, 1130, 1398
MalI	GATC	5 cut(s)	249, 737, 981, 1011, 1324
MboI	GATC	5 cut(s)	247, 735, 979, 1009, 1322
MboII	GAAGA	6 cut(s)	898, 1014, 1046, 1310, 1475, 1522
MflI	RGATCY	1 cut(s)	247
MhlI	GDGCHC	1 cut(s)	414
MlsI	TGGCCA	2 cut(s)	488, 1529
MluCI	AATT	7 cut(s)	334, 642, 912, 1005, 1186, 1236, 1565
MluNI	TGGCCA	2 cut(s)	488, 1529
Mox20I	TGGCCA	2 cut(s)	488, 1529
MroXI	GAANNNNTTC	1 cut(s)	311
MscI	TGGCCA	2 cut(s)	488, 1529
MseI	TTAA	5 cut(s)	768, 1074, 1173, 1473, 1494
MslI	CAYNNNNRTG	2 cut(s)	524, 819
Msp20I	TGGCCA	2 cut(s)	488, 1529
MspA1I	CMGCKG	3 cut(s)	171, 177, 1301
MspI	CCGG	4 cut(s)	236, 252, 569, 1403
MspR9I	CCNGG	4 cut(s)	236, 252, 262, 446
Mva1269I	GAATGC	1 cut(s)	1384
MvaI	CCWGG	2 cut(s)	262, 446
MvnI	CGCG	5 cut(s)	171, 177, 299, 465, 670
NciI	CCSGG	2 cut(s)	236, 252
NdeII	GATC	5 cut(s)	247, 735, 979, 1009, 1322
NlaIII	CATG	5 cut(s)	698, 818, 973, 1112, 1537
NlaIV	GGNNCC	4 cut(s)	249, 285, 469, 508
NmuCI	GTSAC	3 cut(s)	515, 649, 1398
NotI	GCGGCCGC	2 cut(s)	172, 178
NsbI	TGCGCA	1 cut(s)	1184
PaeR7I	CTCGAG	1 cut(s)	373
PcsI	WCGNNNNNNNCGW	3 cut(s)	111, 147, 219
PctI	GAATGC	1 cut(s)	1384
PdmI	GAANNNNTTC	1 cut(s)	311
PfeI	GAWTC	6 cut(s)	242, 679, 1025, 1195, 1483, 1513
PflMI	CCANNNNNTGG	2 cut(s)	917, 1588
PfoI	TCCNGGA	1 cut(s)	250
PinAI	ACCGGT	1 cut(s)	568
Psp6I	CCWGG	2 cut(s)	260, 444
PspGI	CCWGG	2 cut(s)	260, 444
PspN4I	GGNNCC	4 cut(s)	249, 285, 469, 508
PspPI	GGNCC	1 cut(s)	758
PspXI	VCTCGAGB	1 cut(s)	373
PsuI	RGATCY	1 cut(s)	247
PvuII	CAGCTG	1 cut(s)	1301
RsaI	GTAC	3 cut(s)	368, 482, 958
RsaNI	GTAC	3 cut(s)	367, 481, 957
RseI	CAYNNNNRTG	2 cut(s)	524, 819
SacII	CCGCGG	2 cut(s)	172, 178
SaqAI	TTAA	5 cut(s)	768, 1074, 1173, 1473, 1494
Sau3AI	GATC	5 cut(s)	247, 735, 979, 1009, 1322
Sau96I	GGNCC	1 cut(s)	758
ScaI	AGTACT	1 cut(s)	482
ScrFI	CCNGG	4 cut(s)	236, 252, 262, 446
SduI	GDGCHC	1 cut(s)	414
SfaNI	GCATC	5 cut(s)	83, 592, 718, 811, 1229
Sfr274I	CTCGAG	1 cut(s)	373
Sfr303I	CCGCGG	2 cut(s)	172, 178
SgrAI	CRCCGGYG	1 cut(s)	568
SgrBI	CCGCGG	2 cut(s)	172, 178
SlaI	CTCGAG	1 cut(s)	373
SmiMI	CAYNNNNRTG	2 cut(s)	524, 819
SmlI	CTYRAG	2 cut(s)	373, 455
SmoI	CTYRAG	2 cut(s)	373, 455
Sse9I	AATT	7 cut(s)	334, 642, 912, 1005, 1186, 1236, 1565
SspI	AATATT	2 cut(s)	832, 1078
SspMI	CTAG	3 cut(s)	59, 713, 1628
StyD4I	CCNGG	4 cut(s)	234, 250, 260, 444
TaaI	ACNGT	6 cut(s)	493, 535, 613, 1096, 1547, 1656
TaiI	ACGT	1 cut(s)	141
TaqI	TCGA	5 cut(s)	141, 150, 290, 374, 1321
TasI	AATT	7 cut(s)	334, 642, 912, 1005, 1186, 1236, 1565
TatI	WGTACW	2 cut(s)	366, 480
TauI	GCSGC	9 cut(s)	101, 171, 174, 177, 180, 183, 402, 468, 1396
TfiI	GAWTC	6 cut(s)	242, 679, 1025, 1195, 1483, 1513
Tru1I	TTAA	5 cut(s)	768, 1074, 1173, 1473, 1494
Tru9I	TTAA	5 cut(s)	768, 1074, 1173, 1473, 1494
TscAI	CASTG	6 cut(s)	388, 435, 496, 654, 1021, 1652
TseFI	GTSAC	3 cut(s)	515, 649, 1398
TseI	GCWGC	8 cut(s)	343, 352, 378, 595, 731, 1381, 1411, 1619
Tsp45I	GTSAC	3 cut(s)	515, 649, 1398
TspDTI	ATGAA	5 cut(s)	683, 859, 986, 1257, 1476
TspRI	CASTG	6 cut(s)	388, 435, 496, 654, 1021, 1652
Van91I	CCANNNNNTGG	2 cut(s)	917, 1588
XapI	RAATTY	2 cut(s)	334, 1565
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1151
XhoI	CTCGAG	1 cut(s)	373
XmnI	GAANNNNTTC	1 cut(s)	311
XspI	CTAG	3 cut(s)	59, 713, 1628
ZrmI	AGTACT	1 cut(s)	482

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.