Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0001244

Physical Location & Seq

Genomic Coordinates Reverse (-)

11791587 .. 11795360

Gene Structure 3774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG144700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGGCGACAACAAGCGAAAACGAGGCCGTAAGCCCAAAACCCCCACCCCCGAAACCCTAGCCGCCACCACCGCATCCCCACCACCAACAACAACCACATCCGCCGCAGACGACGATGAAGACGCCGTTTTCTCAGTCAGCAACGTCGAGATTATCGACCCCAAATCCCCCCGCCGAGGCCGCGGCCGCGGCCGCCCCAAGAAGCTCCCGAAGCTCTCCGAAAACGGCGACCACGACCCGCCCGCCCCGGCCGATTCGGATCCCGGAACGGCCTGGGAGGGCGGGGCGAGGGTGGTGCCGTCGATGGACGCGGTGGTGAAGGTGTTCTGCACGCACACCGAGCCGAATTTCTCGCTGCCGTGGCAGCGAAAGAGGCAGTACAGCTCGAGCAGCAGTGGGTTTGTGATTGGCGGCAGGAGGGTGCTCACCAATGCTCATTCAGTGGAGCATTACACCCAGGTCAAGCTCAAGAAGCGCGGCTCCGATACCAAGTACTTGGCCACTGTTCTTGCTATTGGCACCGAGTGTGACATTGCGATGCTTACGGTTGATGATGATGAGTTTTGGGAAGGTGTGTCACCGGTGGAGTTTGGGGAGTTGCCCGCGCTGCAAGATGCTGTTACTGTCGTGGGTTATCCGATTGGGGGAGACACGATTTCAGTGACGAGTGGCGTTGTATCGCGGATTGAGATTCTGTCATATGTTCATGGGTCGACTGAACTGCTAGGTTTGCAGATAGATGCTGCAATCAACTCTGGAAACTCGGGTGGGCCTGCTTTTAATGATAAAGGAACTTGTGTGGGTATTGCATTTCAGTCCCTAAAACATGAGGATGCGGAGAATATTGGTTATGTCATACCCACACCAGTAATAATGCACTTCATCAAAGATTATGAGAAGAATGGAGCATATACAGGATTTCCAATTCTTGGGATTGAGTGGCAGAAAATGGAAAATCCTGATTTGCGTACATCAATGGGCATGAAACCTGATCAAAAGGGTGTTCGTATCAGAAGAATTGATCCCACTGCTCTGGAATCTCAGGTTTTGAAGCCATCTGATATTCTTCTCAGCTTTGATGGAGTTAATATTGCCAATGATGGAACAGTTCCTTTTCGGCATGGAGAACGCATAGGTTTTAGTTACCTCATATCCCAGAAATATACTGGGGATAACTCAAAGGTTAAAGTTCTGCGCAATTCTGAGATTCTCAGTTTTGATATAAAACTTGCATCCCACAAAAGACTAATTCCAGCACACATCAAGGGCAGACCTCCTTCATATTATATTGTTGCAGGATTTGTTTTCACAGCTGTATCTGTTCCCTATCTTCGATCCGAGTATGGAAAGGATTATGAGTTTGAAGCTCCTGTCAAACTTTTGGACAAAATGCTGCATTCCTTGCGGCAGTCACCGGATGAGCAGCTTGTAGTGGTTTCTCAGGTGCTTGTGGCTGATATCAACATTGGGTATGAAGACATAGTTAACACGCAGGTACTTGCTTTTAATGGTAAGCCTGTGAAGAATCTAAAAAGCTTGGCCAGCATGGTAGAGAACTGTGAGGATGAGTTTTTGAAATTTGATTTAGAATACCAACAGGTTCTCTCTCTCTTTTTCAATATCTATCTCTATCTCCGATACATGTGGTGTGTGCCTGCATTATGTCTCTATCATATGTTAAGAATTGGAACTGGTGTTTGTGCAGATGGCAGTCCTCCGAACAAATACTGCAAAAGCAGCTACCCTAGATATACTTGCTACACACTGCATACCGTCAGCAATGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009507 GO:0009536 GO:0016787 GO:0017171 GO:0019538 GO:0031974 GO:0031981 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_2 Trypsin_2

Protein Analysis

595

Amino Acids

65.68

Weight (kDa)

6.52

Isoelectric Point (pI)

44.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin	PF00089	114 - 294	5.1e-19	Trypsin
Trypsin_2	PF13365	132 - 269	1.8e-20	Trypsin-like peptidase domain
PDZ_3	PF17815	417 - 536	2.1e-38	PDZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40200
fragaria_vesca	FvH4_5g04990 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350 FvH4_6g50350
malus_domestica	MD06G1178100.v1.1 MD06G1178200.v1.1 MD09G1037000.v1.1 MD09G1037100.v1.1 MD14G1184600.v1.1 MD17G1038400.v1.1 MD17G1038500.v1.1
prunus_persica	Prupe.3G280500_v2.0.a1 Prupe.3G280600_v2.0.a1 Prupe.5G177300_v2.0.a1 Prupe.5G177300_v2.0.a1
pyrus_communis	pycom06g15840 pycom111g02980 pycom14g15360 pycom17g03470
rosa_chinensis	RchiOBHm_Chr1g0327041 RchiOBHm_Chr2g0170661 RchiOBHm_Chr2g0170671 RchiOBHm_Chr7g0194051
rosa_laevigata	RLG00000004221 RLG00000021973 RLG00000021974
rosa_multiflora	Rmu_sc0003787.1_g000010 Rmu_sc0003787.1_g000011 Rmu_sc0009433.1_g000001 Rmu_sc0023958.1_g000001 Rmu_sc0042111.1_g000001
rosa_roxburghii	Rroxscaffold_2G00081130 Rroxscaffold_2G00081140 Rroxscaffold_3G00261590
rosa_rugosa	Rorug02G0550300 Rorug07G0013500
rosa_samantha	Rh2AG623200 Rh2AG623300 Rh2BG633700 Rh2CG602900 Rh2CG603000 Rh2DG646500 Rh7AG140600 Rh7BG141300 Rh7CG144700 Rh7DG142000 Rh7DG324300
rosa_wichuraiana	Rw2G028950 Rw2G051610 Rw2G051620 Rw7G012010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1196
Acc36I	ACCTGC	1 cut(s)	1483
AccB1I	GGYRCC	2 cut(s)	295, 518
AccB7I	CCANNNNNTGG	1 cut(s)	929
AccI	GTMKAC	1 cut(s)	713
AccII	CGCG	6 cut(s)	183, 189, 311, 477, 605, 682
AclWI	GGATC	4 cut(s)	254, 267, 1016, 1329
AcoI	YGGCCR	5 cut(s)	184, 190, 249, 498, 1539
AcsI	RAATTY	2 cut(s)	346, 1577
AcyI	GRCGYC	1 cut(s)	123
AdeI	CACNNNGTG	1 cut(s)	525
AfaI	GTAC	4 cut(s)	380, 494, 970, 1497
AfiI	CCNNNNNNNGG	3 cut(s)	176, 644, 929
AflIII	ACRYGT	1 cut(s)	1641
AgeI	ACCGGT	1 cut(s)	580
AgsI	TTSAA	4 cut(s)	1051, 1364, 1576, 1618
AjnI	CCWGG	2 cut(s)	272, 456
Alw21I	GWGCWC	1 cut(s)	426
Alw26I	GTCTC	2 cut(s)	642, 1670
AlwI	GGATC	4 cut(s)	254, 267, 1016, 1329
Ama87I	CYCGRG	2 cut(s)	385, 763
AoxI	GGCC	9 cut(s)	25, 178, 184, 190, 249, 270, 498, 770, 1539
ApeKI	GCWGC	8 cut(s)	355, 364, 390, 607, 743, 1393, 1423, 1737
ApoI	RAATTY	2 cut(s)	346, 1577
AsiGI	ACCGGT	1 cut(s)	580
Asp700I	GAANNNNTTC	1 cut(s)	323
AspLEI	GCGC	3 cut(s)	477, 607, 1197
AspS9I	GGNCC	1 cut(s)	770
AsuC2I	CCSGG	2 cut(s)	248, 264
AsuHPI	GGTGA	4 cut(s)	328, 418, 570, 1404
AvaI	CYCGRG	2 cut(s)	385, 763
BaeI	ACNNNNGTAYC	2 cut(s)	1299, 1332
BalI	TGGCCA	2 cut(s)	500, 1541
BamHI	GGATCC	1 cut(s)	259
BanI	GGYRCC	2 cut(s)	295, 518
BbsI	GAAGAC	2 cut(s)	126, 1482
Bbv12I	GWGCWC	1 cut(s)	426
BbvI	GCAGC	8 cut(s)	342, 376, 402, 594, 730, 1380, 1435, 1749
BccI	CCATC	5 cut(s)	298, 1063, 1073, 1094, 1700
BceAI	ACGGC	6 cut(s)	12, 110, 241, 283, 285, 343
BcgI	CGANNNNNNTGC	4 cut(s)	277, 311, 703, 737
BciT130I	CCWGG	2 cut(s)	274, 458
BclI	TGATCA	1 cut(s)	991
BcnI	CCSGG	2 cut(s)	248, 264
BcoDI	GTCTC	2 cut(s)	642, 1670
BfaI	CTAG	3 cut(s)	59, 725, 1746
BfuAI	ACCTGC	1 cut(s)	1483
BmcAI	AGTACT	1 cut(s)	494
Bme1390I	CCNGG	4 cut(s)	248, 264, 274, 458
BmeT110I	CYCGRG	2 cut(s)	385, 763
BmgT120I	GGNCC	1 cut(s)	770
BmiI	GGNNCC	4 cut(s)	261, 297, 481, 520
BmrFI	CCNGG	4 cut(s)	248, 264, 274, 458
BmrI	ACTGGG	1 cut(s)	1176
BmsI	GCATC	6 cut(s)	83, 528, 604, 730, 823, 1241
BmuI	ACTGGG	1 cut(s)	1176
BpiI	GAAGAC	2 cut(s)	126, 1482
BpuEI	CTTGAG	1 cut(s)	452
BpuMI	CCSGG	2 cut(s)	248, 264
BsaBI	GATNNNNATC	1 cut(s)	258
BsaHI	GRCGYC	1 cut(s)	123
BsaJI	CCNNGG	7 cut(s)	175, 181, 187, 246, 273, 359, 456
BsaWI	WCCGGW	2 cut(s)	580, 1414
Bsc4I	CCNNNNNNNGG	3 cut(s)	176, 644, 929
Bse118I	RCCGGY	1 cut(s)	580
Bse1I	ACTGG	3 cut(s)	866, 1171, 1696
Bse3DI	GCAATG	2 cut(s)	531, 1786
Bse8I	GATNNNNATC	1 cut(s)	258
BseBI	CCWGG	2 cut(s)	274, 458
BseDI	CCNNGG	7 cut(s)	175, 181, 187, 246, 273, 359, 456
BseGI	GGATG	6 cut(s)	74, 98, 838, 1232, 1423, 1570
BseJI	GATNNNNATC	1 cut(s)	258
BseLI	CCNNNNNNNGG	3 cut(s)	176, 644, 929
BseMI	GCAATG	2 cut(s)	531, 1786
BseMII	CTCAG	6 cut(s)	147, 1055, 1084, 1194, 1225, 1454
BseNI	ACTGG	3 cut(s)	866, 1171, 1696
BseX3I	CGGCCG	3 cut(s)	184, 190, 249
BseXI	GCAGC	8 cut(s)	342, 376, 402, 594, 730, 1380, 1435, 1749
BsgI	GTGCAG	2 cut(s)	313, 1722
Bsh1236I	CGCG	6 cut(s)	183, 189, 311, 477, 605, 682
Bsh1285I	CGRYCG	3 cut(s)	187, 193, 252
BshFI	GGCC	9 cut(s)	27, 180, 186, 192, 251, 272, 500, 772, 1541
BshNI	GGYRCC	2 cut(s)	295, 518
BshTI	ACCGGT	1 cut(s)	580
BsiEI	CGRYCG	3 cut(s)	187, 193, 252
BsiHKAI	GWGCWC	1 cut(s)	426
BsiHKCI	CYCGRG	2 cut(s)	385, 763
BsiSI	CCGG	4 cut(s)	248, 264, 581, 1415
BslFI	GGGAC	1 cut(s)	802
BslI	CCNNNNNNNGG	3 cut(s)	176, 644, 929
BsmAI	GTCTC	2 cut(s)	642, 1670
BsmFI	GGGAC	1 cut(s)	802
BsmI	GAATGC	1 cut(s)	1396
BsnI	GGCC	9 cut(s)	27, 180, 186, 192, 251, 272, 500, 772, 1541
BsoBI	CYCGRG	2 cut(s)	385, 763
Bsp1286I	GDGCHC	1 cut(s)	426
Bsp143I	GATC	4 cut(s)	259, 991, 1021, 1334
BspANI	GGCC	9 cut(s)	27, 180, 186, 192, 251, 272, 500, 772, 1541
BspCNI	CTCAG	6 cut(s)	146, 1054, 1083, 1195, 1224, 1453
BspFNI	CGCG	6 cut(s)	183, 189, 311, 477, 605, 682
BspLI	GGNNCC	4 cut(s)	261, 297, 481, 520
BspMI	ACCTGC	1 cut(s)	1483
BspPI	GGATC	4 cut(s)	254, 267, 1016, 1329
BspT107I	GGYRCC	2 cut(s)	295, 518
BsrDI	GCAATG	2 cut(s)	531, 1786
BsrFI	RCCGGY	1 cut(s)	580
BsrI	ACTGG	3 cut(s)	866, 1171, 1696
BssAI	RCCGGY	1 cut(s)	580
BssECI	CCNNGG	7 cut(s)	175, 181, 187, 246, 273, 359, 456
BssMI	GATC	4 cut(s)	259, 991, 1021, 1334
BssNI	GRCGYC	1 cut(s)	123
Bst2UI	CCWGG	2 cut(s)	274, 458
Bst4CI	ACNGT	6 cut(s)	505, 547, 625, 1108, 1559, 1774
BstACI	GRCGYC	1 cut(s)	123
BstAPI	GCANNNNNTGC	1 cut(s)	1402
BstC8I	GCNNGC	6 cut(s)	243, 332, 603, 774, 1543, 1656
BstDEI	CTNAG	6 cut(s)	133, 1041, 1070, 1203, 1211, 1440
BstDSI	CCRYGG	3 cut(s)	181, 187, 359
BstF5I	GGATG	6 cut(s)	74, 98, 838, 1232, 1423, 1570
BstFNI	CGCG	6 cut(s)	183, 189, 311, 477, 605, 682
BstHHI	GCGC	3 cut(s)	477, 607, 1197
BstKTI	GATC	4 cut(s)	262, 994, 1024, 1337
BstMAI	GTCTC	2 cut(s)	642, 1670
BstMBI	GATC	4 cut(s)	259, 991, 1021, 1334
BstMCI	CGRYCG	3 cut(s)	187, 193, 252
BstNI	CCWGG	2 cut(s)	274, 458
BstNSI	RCATGY	1 cut(s)	1645
BstSCI	CCNGG	4 cut(s)	246, 262, 272, 456
BstUI	CGCG	6 cut(s)	183, 189, 311, 477, 605, 682
BstV1I	GCAGC	8 cut(s)	342, 376, 402, 594, 730, 1380, 1435, 1749
BstV2I	GAAGAC	2 cut(s)	126, 1482
BstX2I	RGATCY	1 cut(s)	259
BstXI	CCANNNNNNTGG	2 cut(s)	496, 1033
BstYI	RGATCY	1 cut(s)	259
BstZI	CGGCCG	3 cut(s)	184, 190, 249
BsuRI	GGCC	9 cut(s)	27, 180, 186, 192, 251, 272, 500, 772, 1541
BtgI	CCRYGG	3 cut(s)	181, 187, 359
BtgZI	GCGATG	1 cut(s)	551
BtsCI	GGATG	6 cut(s)	74, 98, 838, 1232, 1423, 1570
BtsI	GCAGTG	3 cut(s)	400, 1026, 1763
BtsIMutI	CAGTG	6 cut(s)	400, 447, 501, 666, 1026, 1763
BveI	ACCTGC	1 cut(s)	1483
Cac8I	GCNNGC	6 cut(s)	243, 332, 603, 774, 1543, 1656
CciNI	GCGGCCGC	2 cut(s)	184, 190
CfoI	GCGC	3 cut(s)	477, 607, 1197
Cfr10I	RCCGGY	1 cut(s)	580
Cfr13I	GGNCC	1 cut(s)	770
Cfr42I	CCGCGG	2 cut(s)	184, 190
CseI	GACGC	2 cut(s)	131, 317
Csp6I	GTAC	4 cut(s)	379, 493, 969, 1496
CspAI	ACCGGT	1 cut(s)	580
CspCI	CAANNNNNGTGG	2 cut(s)	490, 525
CviAII	CATG	6 cut(s)	707, 827, 982, 1121, 1546, 1642
CviQI	GTAC	4 cut(s)	379, 493, 969, 1496
DdeI	CTNAG	6 cut(s)	133, 1041, 1070, 1203, 1211, 1440
DpnI	GATC	4 cut(s)	261, 993, 1023, 1336
DpnII	GATC	4 cut(s)	259, 991, 1021, 1334
DraIII	CACNNNGTG	1 cut(s)	525
EaeI	YGGCCR	5 cut(s)	184, 190, 249, 498, 1539
EagI	CGGCCG	3 cut(s)	184, 190, 249
EciI	GGCGGA	1 cut(s)	91
EclXI	CGGCCG	3 cut(s)	184, 190, 249
Eco32I	GATATC	1 cut(s)	1459
Eco52I	CGGCCG	3 cut(s)	184, 190, 249
Eco88I	CYCGRG	2 cut(s)	385, 763
EcoRII	CCWGG	2 cut(s)	272, 456
EcoRV	GATATC	1 cut(s)	1459
FaeI	CATG	6 cut(s)	710, 830, 985, 1124, 1549, 1645
FaqI	GGGAC	1 cut(s)	802
FatI	CATG	6 cut(s)	706, 826, 981, 1120, 1545, 1641
FauI	CCCGC	5 cut(s)	179, 246, 250, 275, 610
FauNDI	CATATG	2 cut(s)	700, 1674
FbaI	TGATCA	1 cut(s)	991
FblI	GTMKAC	1 cut(s)	713
FokI	GGATG	6 cut(s)	61, 85, 845, 1219, 1430, 1577
FspBI	CTAG	3 cut(s)	59, 725, 1746
FspI	TGCGCA	1 cut(s)	1196
GlaI	GCGC	3 cut(s)	476, 606, 1196
HaeIII	GGCC	9 cut(s)	27, 180, 186, 192, 251, 272, 500, 772, 1541
HapII	CCGG	4 cut(s)	248, 264, 581, 1415
HgaI	GACGC	2 cut(s)	131, 317
HhaI	GCGC	3 cut(s)	477, 607, 1197
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	6 cut(s)	710, 830, 985, 1124, 1549, 1645
Hin6I	GCGC	3 cut(s)	475, 605, 1195
HinP1I	GCGC	3 cut(s)	475, 605, 1195
HincII	GTYRAC	2 cut(s)	714, 1486
HindII	GTYRAC	2 cut(s)	714, 1486
HindIII	AAGCTT	1 cut(s)	1534
HinfI	GANTC	5 cut(s)	254, 691, 1037, 1207, 1525
HpaI	GTTAAC	1 cut(s)	1486
HpaII	CCGG	4 cut(s)	248, 264, 581, 1415
HphI	GGTGA	4 cut(s)	328, 418, 570, 1404
Hpy166II	GTNNAC	2 cut(s)	714, 1486
Hpy188III	TCNNGA	6 cut(s)	148, 208, 469, 756, 959, 1034
Hpy8I	GTNNAC	2 cut(s)	714, 1486
Hpy99I	CGWCG	3 cut(s)	116, 149, 304
HpyAV	CCTTC	3 cut(s)	313, 563, 1287
HpyCH4III	ACNGT	6 cut(s)	505, 547, 625, 1108, 1559, 1774
HpyCH4IV	ACGT	1 cut(s)	144
HpyF3I	CTNAG	6 cut(s)	133, 1041, 1070, 1203, 1211, 1440
HpySE526I	ACGT	1 cut(s)	144
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	6 cut(s)	710, 830, 985, 1124, 1549, 1645
HspAI	GCGC	3 cut(s)	475, 605, 1195
Ksp22I	TGATCA	1 cut(s)	991
KspAI	GTTAAC	1 cut(s)	1486
KspI	CCGCGG	2 cut(s)	184, 190
Kzo9I	GATC	4 cut(s)	259, 991, 1021, 1334
LmnI	GCTCC	5 cut(s)	210, 445, 485, 905, 1372
Lsp1109I	GCAGC	8 cut(s)	342, 376, 402, 594, 730, 1380, 1435, 1749
LweI	GCATC	6 cut(s)	83, 528, 604, 730, 823, 1241
MaeI	CTAG	3 cut(s)	59, 725, 1746
MaeII	ACGT	1 cut(s)	144
MaeIII	GTNAC	6 cut(s)	527, 576, 619, 661, 1142, 1410
MalI	GATC	4 cut(s)	261, 993, 1023, 1336
MboI	GATC	4 cut(s)	259, 991, 1021, 1334
MboII	GAAGA	7 cut(s)	131, 910, 1026, 1058, 1322, 1487, 1534
MflI	RGATCY	1 cut(s)	259
MhlI	GDGCHC	1 cut(s)	426
MlsI	TGGCCA	2 cut(s)	500, 1541
MluCI	AATT	7 cut(s)	346, 924, 1017, 1198, 1248, 1577, 1683
MluNI	TGGCCA	2 cut(s)	500, 1541
Mox20I	TGGCCA	2 cut(s)	500, 1541
MroXI	GAANNNNTTC	1 cut(s)	323
MscI	TGGCCA	2 cut(s)	500, 1541
MseI	TTAA	6 cut(s)	780, 1086, 1185, 1485, 1506, 1679
MslI	CAYNNNNRTG	2 cut(s)	536, 831
Msp20I	TGGCCA	2 cut(s)	500, 1541
MspA1I	CMGCKG	3 cut(s)	183, 189, 1313
MspI	CCGG	4 cut(s)	248, 264, 581, 1415
MspR9I	CCNGG	4 cut(s)	248, 264, 274, 458
Mva1269I	GAATGC	1 cut(s)	1396
MvaI	CCWGG	2 cut(s)	274, 458
MvnI	CGCG	6 cut(s)	183, 189, 311, 477, 605, 682
NciI	CCSGG	2 cut(s)	248, 264
NdeI	CATATG	2 cut(s)	700, 1674
NdeII	GATC	4 cut(s)	259, 991, 1021, 1334
NlaIII	CATG	6 cut(s)	710, 830, 985, 1124, 1549, 1645
NlaIV	GGNNCC	4 cut(s)	261, 297, 481, 520
NmeAIII	GCCGAG	1 cut(s)	200
NmuCI	GTSAC	4 cut(s)	527, 576, 661, 1410
NotI	GCGGCCGC	2 cut(s)	184, 190
NsbI	TGCGCA	1 cut(s)	1196
NspI	RCATGY	1 cut(s)	1645
PaeR7I	CTCGAG	1 cut(s)	385
PciI	ACATGT	1 cut(s)	1641
PcsI	WCGNNNNNNNCGW	2 cut(s)	153, 231
PctI	GAATGC	1 cut(s)	1396
PdmI	GAANNNNTTC	1 cut(s)	323
PfeI	GAWTC	5 cut(s)	254, 691, 1037, 1207, 1525
PflMI	CCANNNNNTGG	1 cut(s)	929
PfoI	TCCNGGA	1 cut(s)	262
PinAI	ACCGGT	1 cut(s)	580
PscI	ACATGT	1 cut(s)	1641
Psp6I	CCWGG	2 cut(s)	272, 456
PspGI	CCWGG	2 cut(s)	272, 456
PspN4I	GGNNCC	4 cut(s)	261, 297, 481, 520
PspPI	GGNCC	1 cut(s)	770
PspXI	VCTCGAGB	1 cut(s)	385
PsuI	RGATCY	1 cut(s)	259
PvuII	CAGCTG	1 cut(s)	1313
RsaI	GTAC	4 cut(s)	380, 494, 970, 1497
RsaNI	GTAC	4 cut(s)	379, 493, 969, 1496
RseI	CAYNNNNRTG	2 cut(s)	536, 831
SacII	CCGCGG	2 cut(s)	184, 190
SalI	GTCGAC	1 cut(s)	712
SaqAI	TTAA	6 cut(s)	780, 1086, 1185, 1485, 1506, 1679
Sau3AI	GATC	4 cut(s)	259, 991, 1021, 1334
Sau96I	GGNCC	1 cut(s)	770
ScaI	AGTACT	1 cut(s)	494
ScrFI	CCNGG	4 cut(s)	248, 264, 274, 458
SduI	GDGCHC	1 cut(s)	426
SfaNI	GCATC	6 cut(s)	83, 528, 604, 730, 823, 1241
Sfr274I	CTCGAG	1 cut(s)	385
Sfr303I	CCGCGG	2 cut(s)	184, 190
SgrAI	CRCCGGYG	1 cut(s)	580
SgrBI	CCGCGG	2 cut(s)	184, 190
SlaI	CTCGAG	1 cut(s)	385
SmiMI	CAYNNNNRTG	2 cut(s)	536, 831
SmlI	CTYRAG	2 cut(s)	385, 467
SmoI	CTYRAG	2 cut(s)	385, 467
Sse9I	AATT	7 cut(s)	346, 924, 1017, 1198, 1248, 1577, 1683
SspI	AATATT	2 cut(s)	844, 1090
SspMI	CTAG	3 cut(s)	59, 725, 1746
StyD4I	CCNGG	4 cut(s)	246, 262, 272, 456
TaaI	ACNGT	6 cut(s)	505, 547, 625, 1108, 1559, 1774
TaiI	ACGT	1 cut(s)	147
TaqI	TCGA	6 cut(s)	147, 156, 302, 386, 713, 1333
TasI	AATT	7 cut(s)	346, 924, 1017, 1198, 1248, 1577, 1683
TatI	WGTACW	2 cut(s)	378, 492
TfiI	GAWTC	5 cut(s)	254, 691, 1037, 1207, 1525
Tru1I	TTAA	6 cut(s)	780, 1086, 1185, 1485, 1506, 1679
Tru9I	TTAA	6 cut(s)	780, 1086, 1185, 1485, 1506, 1679
TscAI	CASTG	6 cut(s)	400, 447, 508, 666, 1033, 1770
TseFI	GTSAC	4 cut(s)	527, 576, 661, 1410
TseI	GCWGC	8 cut(s)	355, 364, 390, 607, 743, 1393, 1423, 1737
Tsp45I	GTSAC	4 cut(s)	527, 576, 661, 1410
TspDTI	ATGAA	6 cut(s)	132, 695, 871, 998, 1269, 1488
TspRI	CASTG	6 cut(s)	400, 447, 508, 666, 1033, 1770
Van91I	CCANNNNNTGG	1 cut(s)	929
XapI	RAATTY	2 cut(s)	346, 1577
XceI	RCATGY	1 cut(s)	1645
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1163
XhoI	CTCGAG	1 cut(s)	385
XmiI	GTMKAC	1 cut(s)	713
XmnI	GAANNNNTTC	1 cut(s)	323
XspI	CTAG	3 cut(s)	59, 725, 1746
ZrmI	AGTACT	1 cut(s)	494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.