pycom2303g00070

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00002303
OG0000037
Physical Location & Seq
Forward (+)
18663 .. 20063
1401 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom2303g00070.2

Sequence Viewer

Length: 1086 bp
ATGCTCTCACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCAACCCTCGAGGGGATCCCGCCAGTCAGCTTCCTTGCGCCTTACGGACGGGCCGAATGGGGAGCTCGCTGGCCGACGCCGGGAGCGCGCAGTTGCCGAAGCACGCCGGTACGGCGCGCGCTGCCCGCCACGATCGCGTCGACGGCGTCTCCGCGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCCGCAATCCGCGTCGGTCCACGCCCCGAGCCGATCGGCGGACCGGCTTTCGACCGTTCCACATCCGACCGGGGCGCATCGCCAGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCACCTTCCAGTGGACTTGGGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGACGGCGCCCGATTCTCAAGCTGGGCTGTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTCGGAGGCGCGGGGGGGCAACGGCGTGTGACGCCCAGGCAGGCGTGCCCTCGGCCTAAAGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTTTGACTTTTACAGAAGACGACGACGCCGCCCGCGCGTGCACCGTTTCCGGGGCGGCGGGAGCGCGCTCTTTCGTTCGGGTTCCTTGGCGCAAAGACGCGCCGGTGTTCGTTGGTACGCCCGGGAGCGGGCTCCCGGGATAAGGGGACGCCGAGCCCGAAGGCCCGCCGGCCCCCGACGTCGGAACGGGTTCTCGGGTCGTTCTGCTGCGCAGGTTCGACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

362

Amino Acids

40.38

Weight (kDa)

12.0

Isoelectric Point (pI)

83.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1042
AbsI CCTCGAGG 1 cut(s) 55
Acc16I TGCGCA 1 cut(s) 1071
Acc36I ACCTGC 1 cut(s) 1063
AccB1I GGYRCC 2 cut(s) 545, 620
AccBSI CCGCTC 1 cut(s) 988
AccI GTMKAC 1 cut(s) 187
AclWI GGATC 2 cut(s) 57, 70
AcoI YGGCCR 2 cut(s) 118, 226
AcsI RAATTY 1 cut(s) 442
AcyI GRCGYC 8 cut(s) 124, 193, 546, 621, 707, 886, 1009, 1039
AfaI GTAC 3 cut(s) 158, 398, 977
AgsI TTSAA 3 cut(s) 347, 370, 759
AjnI CCWGG 1 cut(s) 710
AluBI AGCT 3 cut(s) 77, 112, 636
AluI AGCT 3 cut(s) 77, 112, 636
Alw21I GWGCWC 2 cut(s) 114, 903
Alw26I GTCTC 2 cut(s) 200, 419
Alw44I GTGCAC 1 cut(s) 899
AlwI GGATC 2 cut(s) 57, 70
Ama87I CYCGRG 6 cut(s) 55, 217, 258, 981, 995, 1054
AoxI GGCC 7 cut(s) 98, 118, 226, 567, 728, 1022, 1030
ApaI GGGCCC 1 cut(s) 571
ApaLI GTGCAC 1 cut(s) 899
ApeKI GCWGC 3 cut(s) 168, 462, 1067
ApoI RAATTY 1 cut(s) 442
Asp700I GAANNNNTTC 1 cut(s) 1049
AspS9I GGNCC 9 cut(s) 98, 249, 273, 513, 567, 568, 573, 1023, 1031
AsuHPI GGTGA 1 cut(s) 526
AsuII TTCGAA 1 cut(s) 608
AvaI CYCGRG 6 cut(s) 55, 217, 258, 981, 995, 1054
AvaII GGWCC 4 cut(s) 249, 273, 513, 573
BaeGI GKGCMC 4 cut(s) 522, 571, 725, 903
BamHI GGATCC 1 cut(s) 62
BanI GGYRCC 2 cut(s) 545, 620
BanII GRGCYC 5 cut(s) 114, 532, 571, 994, 1018
BauI CACGAG 1 cut(s) 498
BbsI GAAGAC 1 cut(s) 883
Bbv12I GWGCWC 2 cut(s) 114, 903
BbvCI CCTCAGC 1 cut(s) 582
BbvI GCAGC 3 cut(s) 155, 449, 1054
BccI CCATC 2 cut(s) 330, 762
BceAI ACGGC 5 cut(s) 175, 206, 634, 644, 713
BciT130I CCWGG 1 cut(s) 712
BcoDI GTCTC 2 cut(s) 200, 419
BfaI CTAG 1 cut(s) 666
BfoI RGCGCY 3 cut(s) 497, 549, 624
BfuAI ACCTGC 1 cut(s) 1063
BglI GCCNNNNNGGC 1 cut(s) 159
BisI GCNGC 9 cut(s) 169, 229, 232, 235, 463, 579, 889, 916, 1068
BlsI GCNGC 9 cut(s) 170, 230, 233, 236, 464, 580, 890, 917, 1069
Bme18I GGWCC 4 cut(s) 249, 273, 513, 573
BmeT110I CYCGRG 6 cut(s) 55, 217, 258, 981, 995, 1054
BmgT120I GGNCC 9 cut(s) 98, 249, 273, 513, 567, 568, 573, 1023, 1031
BmiI GGNNCC 8 cut(s) 64, 514, 547, 569, 622, 943, 993, 1033
BmsI GCATC 2 cut(s) 318, 817
BpiI GAAGAC 1 cut(s) 883
BpmI CTGGAG 1 cut(s) 579
Bpu10I CCTNAGC 1 cut(s) 582
Bpu14I TTCGAA 1 cut(s) 608
BpuEI CTTGAG 1 cut(s) 616
Bsa29I ATCGAT 1 cut(s) 825
BsaHI GRCGYC 8 cut(s) 124, 193, 546, 621, 707, 886, 1009, 1039
BsaI GGTCTC 1 cut(s) 419
BsaXI ACNNNNNCTCC 2 cut(s) 180, 210
Bse118I RCCGGY 4 cut(s) 153, 275, 962, 1028
Bse1I ACTGG 2 cut(s) 70, 556
BseBI CCWGG 1 cut(s) 712
BseCI ATCGAT 1 cut(s) 825
BseGI GGATG 2 cut(s) 294, 322
BseMII CTCAG 2 cut(s) 36, 573
BseNI ACTGG 2 cut(s) 70, 556
BsePI GCGCGC 4 cut(s) 133, 162, 164, 924
BseSI GKGCMC 4 cut(s) 522, 571, 725, 903
BseXI GCAGC 3 cut(s) 155, 449, 1054
BseYI CCCAGC 1 cut(s) 636
Bsh1285I CGRYCG 5 cut(s) 41, 182, 268, 287, 302
BshFI GGCC 7 cut(s) 100, 120, 228, 569, 730, 1024, 1032
BshNI GGYRCC 2 cut(s) 545, 620
BshVI ATCGAT 1 cut(s) 825
BsiEI CGRYCG 5 cut(s) 41, 182, 268, 287, 302
BsiHKAI GWGCWC 2 cut(s) 114, 903
BsiHKCI CYCGRG 6 cut(s) 55, 217, 258, 981, 995, 1054
BslFI GGGAC 1 cut(s) 1020
BsmAI GTCTC 2 cut(s) 200, 419
BsmBI CGTCTC 1 cut(s) 200
BsmFI GGGAC 1 cut(s) 1020
BsmI GAATGC 1 cut(s) 465
BsnI GGCC 7 cut(s) 100, 120, 228, 569, 730, 1024, 1032
Bso31I GGTCTC 1 cut(s) 419
BsoBI CYCGRG 6 cut(s) 55, 217, 258, 981, 995, 1054
Bsp119I TTCGAA 1 cut(s) 608
Bsp120I GGGCCC 1 cut(s) 567
Bsp1286I GDGCHC 8 cut(s) 114, 522, 532, 571, 725, 903, 994, 1018
Bsp143I GATC 4 cut(s) 28, 62, 179, 265
BspANI GGCC 7 cut(s) 100, 120, 228, 569, 730, 1024, 1032
BspCNI CTCAG 2 cut(s) 35, 574
BspDI ATCGAT 1 cut(s) 825
BspLI GGNNCC 8 cut(s) 64, 514, 547, 569, 622, 943, 993, 1033
BspMI ACCTGC 1 cut(s) 1063
BspPI GGATC 2 cut(s) 57, 70
BspT104I TTCGAA 1 cut(s) 608
BspT107I GGYRCC 2 cut(s) 545, 620
BspTNI GGTCTC 1 cut(s) 419
BsrBI CCGCTC 1 cut(s) 988
BsrFI RCCGGY 4 cut(s) 153, 275, 962, 1028
BsrI ACTGG 2 cut(s) 70, 556
BssAI RCCGGY 4 cut(s) 153, 275, 962, 1028
BssHII GCGCGC 4 cut(s) 133, 162, 164, 924
BssMI GATC 4 cut(s) 28, 62, 179, 265
BssNI GRCGYC 8 cut(s) 124, 193, 546, 621, 707, 886, 1009, 1039
BssSI CACGAG 1 cut(s) 498
BssT1I CCWWGG 2 cut(s) 433, 945
Bst2BI CACGAG 1 cut(s) 498
Bst2UI CCWGG 1 cut(s) 712
Bst4CI ACNGT 2 cut(s) 288, 905
BstACI GRCGYC 8 cut(s) 124, 193, 546, 621, 707, 886, 1009, 1039
BstBI TTCGAA 1 cut(s) 608
BstDEI CTNAG 2 cut(s) 22, 582
BstDSI CCRYGG 1 cut(s) 199
BstF5I GGATG 2 cut(s) 294, 322
BstH2I RGCGCY 3 cut(s) 497, 549, 624
BstKTI GATC 4 cut(s) 31, 65, 182, 268
BstMAI GTCTC 2 cut(s) 200, 419
BstMBI GATC 4 cut(s) 28, 62, 179, 265
BstMCI CGRYCG 5 cut(s) 41, 182, 268, 287, 302
BstNI CCWGG 1 cut(s) 712
BstSLI GKGCMC 4 cut(s) 522, 571, 725, 903
BstV1I GCAGC 3 cut(s) 155, 449, 1054
BstV2I GAAGAC 1 cut(s) 883
BstX2I RGATCY 1 cut(s) 62
BstYI RGATCY 1 cut(s) 62
Bsu15I ATCGAT 1 cut(s) 825
BsuRI GGCC 7 cut(s) 100, 120, 228, 569, 730, 1024, 1032
BsuTUI ATCGAT 1 cut(s) 825
BtgI CCRYGG 1 cut(s) 199
BtgZI GCGATG 1 cut(s) 295
BtsCI GGATG 2 cut(s) 294, 322
BtsIMutI CAGTG 1 cut(s) 563
BveI ACCTGC 1 cut(s) 1063
Cfr10I RCCGGY 4 cut(s) 153, 275, 962, 1028
Cfr13I GGNCC 9 cut(s) 98, 249, 273, 513, 567, 568, 573, 1023, 1031
Cfr42I CCGCGG 1 cut(s) 202
Cfr9I CCCGGG 3 cut(s) 217, 981, 995
ClaI ATCGAT 1 cut(s) 825
CpoI CGGWCCG 2 cut(s) 273, 573
CseI GACGC 9 cut(s) 132, 173, 182, 233, 596, 715, 894, 966, 1017
Csp6I GTAC 3 cut(s) 157, 397, 976
CspI CGGWCCG 2 cut(s) 273, 573
CviQI GTAC 3 cut(s) 157, 397, 976
DdeI CTNAG 2 cut(s) 22, 582
DinI GGCGCC 2 cut(s) 547, 622
DpnI GATC 4 cut(s) 30, 64, 181, 267
DpnII GATC 4 cut(s) 28, 62, 179, 265
EaeI YGGCCR 2 cut(s) 118, 226
EciI GGCGGA 2 cut(s) 286, 565
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 2 cut(s) 433, 945
Eco24I GRGCYC 5 cut(s) 114, 532, 571, 994, 1018
Eco31I GGTCTC 1 cut(s) 419
Eco32I GATATC 1 cut(s) 843
Eco47I GGWCC 4 cut(s) 249, 273, 513, 573
Eco53kI GAGCTC 1 cut(s) 112
Eco88I CYCGRG 6 cut(s) 55, 217, 258, 981, 995, 1054
EcoICRI GAGCTC 1 cut(s) 112
EcoRII CCWGG 1 cut(s) 710
EcoRV GATATC 1 cut(s) 843
EcoT14I CCWWGG 2 cut(s) 433, 945
EcoT38I GRGCYC 5 cut(s) 114, 532, 571, 994, 1018
EgeI GGCGCC 2 cut(s) 547, 622
EheI GGCGCC 2 cut(s) 547, 622
ErhI CCWWGG 2 cut(s) 433, 945
Esp3I CGTCTC 1 cut(s) 200
FaiI YATR 1 cut(s) 207
FaqI GGGAC 1 cut(s) 1020
FauI CCCGC 8 cut(s) 74, 180, 194, 679, 900, 911, 981, 1033
FblI GTMKAC 1 cut(s) 187
Fnu4HI GCNGC 9 cut(s) 169, 229, 232, 235, 463, 579, 889, 916, 1068
FokI GGATG 2 cut(s) 281, 309
FriOI GRGCYC 5 cut(s) 114, 532, 571, 994, 1018
Fsp4HI GCNGC 9 cut(s) 169, 229, 232, 235, 463, 579, 889, 916, 1068
FspBI CTAG 1 cut(s) 666
FspI TGCGCA 1 cut(s) 1071
GluI GCNGC 9 cut(s) 169, 229, 232, 235, 463, 579, 889, 916, 1068
GsaI CCCAGC 1 cut(s) 640
GsuI CTGGAG 1 cut(s) 579
HaeII RGCGCY 3 cut(s) 497, 549, 624
HaeIII GGCC 7 cut(s) 100, 120, 228, 569, 730, 1024, 1032
HgaI GACGC 9 cut(s) 132, 173, 182, 233, 596, 715, 894, 966, 1017
Hin1I GRCGYC 8 cut(s) 124, 193, 546, 621, 707, 886, 1009, 1039
HincII GTYRAC 1 cut(s) 188
HindII GTYRAC 1 cut(s) 188
HinfI GANTC 7 cut(s) 359, 482, 627, 672, 763, 780, 856
HphI GGTGA 1 cut(s) 526
Hpy166II GTNNAC 5 cut(s) 188, 252, 561, 774, 901
Hpy188I TCNGA 4 cut(s) 25, 299, 680, 1044
Hpy188III TCNNGA 2 cut(s) 336, 596
Hpy8I GTNNAC 5 cut(s) 188, 252, 561, 774, 901
HpyAV CCTTC 3 cut(s) 28, 562, 1014
HpyCH4III ACNGT 2 cut(s) 288, 905
HpyCH4IV ACGT 2 cut(s) 815, 1039
HpyCH4V TGCA 4 cut(s) 49, 465, 786, 901
HpyF3I CTNAG 2 cut(s) 22, 582
HpySE526I ACGT 2 cut(s) 815, 1039
Hsp92I GRCGYC 8 cut(s) 124, 193, 546, 621, 707, 886, 1009, 1039
KasI GGCGCC 2 cut(s) 545, 620
KroI GCCGGC 1 cut(s) 1028
KroNI GCCGGC 1 cut(s) 1030
KspI CCGCGG 1 cut(s) 202
Kzo9I GATC 4 cut(s) 28, 62, 179, 265
LmnI GCTCC 5 cut(s) 109, 130, 921, 985, 997
Lsp1109I GCAGC 3 cut(s) 155, 449, 1054
LweI GCATC 2 cut(s) 318, 817
MaeI CTAG 1 cut(s) 666
MaeII ACGT 2 cut(s) 815, 1039
MaeIII GTNAC 2 cut(s) 661, 703
MalI GATC 4 cut(s) 30, 64, 181, 267
MbiI CCGCTC 1 cut(s) 988
MboI GATC 4 cut(s) 28, 62, 179, 265
MboII GAAGA 3 cut(s) 38, 811, 888
MflI RGATCY 1 cut(s) 62
MhlI GDGCHC 8 cut(s) 114, 522, 532, 571, 725, 903, 994, 1018
MluCI AATT 4 cut(s) 341, 442, 604, 787
Mly113I GGCGCC 2 cut(s) 546, 621
MlyI GAGTC 4 cut(s) 353, 476, 757, 865
MmeI TCCRAC 2 cut(s) 322, 1022
MroNI GCCGGC 1 cut(s) 1028
MroXI GAANNNNTTC 1 cut(s) 1049
MspA1I CMGCKG 2 cut(s) 201, 581
Mva1269I GAATGC 1 cut(s) 465
MvaI CCWGG 1 cut(s) 712
NaeI GCCGGC 1 cut(s) 1030
NarI GGCGCC 2 cut(s) 546, 621
NdeII GATC 4 cut(s) 28, 62, 179, 265
NgoMIV GCCGGC 1 cut(s) 1028
NlaIV GGNNCC 8 cut(s) 64, 514, 547, 569, 622, 943, 993, 1033
NmeAIII GCCGAG 4 cut(s) 706, 862, 877, 1037
NmuCI GTSAC 1 cut(s) 703
NsbI TGCGCA 1 cut(s) 1071
NspV TTCGAA 1 cut(s) 608
PaeR7I CTCGAG 1 cut(s) 55
PauI GCGCGC 4 cut(s) 133, 162, 164, 924
PcsI WCGNNNNNNNCGW 3 cut(s) 98, 184, 1015
PctI GAATGC 1 cut(s) 465
PdiI GCCGGC 1 cut(s) 1030
PdmI GAANNNNTTC 1 cut(s) 1049
PfeI GAWTC 3 cut(s) 627, 672, 780
PflFI GACNNNGTC 2 cut(s) 192, 511
PkrI GCNGC 9 cut(s) 170, 230, 233, 236, 464, 580, 890, 917, 1069
Ple19I CGATCG 2 cut(s) 182, 268
PleI GAGTC 4 cut(s) 353, 476, 757, 864
PluTI GGCGCC 2 cut(s) 549, 624
PpsI GAGTC 4 cut(s) 353, 476, 757, 864
Psp124BI GAGCTC 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 710
PspFI CCCAGC 1 cut(s) 636
PspGI CCWGG 1 cut(s) 710
PspN4I GGNNCC 8 cut(s) 64, 514, 547, 569, 622, 943, 993, 1033
PspOMI GGGCCC 1 cut(s) 567
PspPI GGNCC 9 cut(s) 98, 249, 273, 513, 567, 568, 573, 1023, 1031
PspXI VCTCGAGB 1 cut(s) 55
PsuI RGATCY 1 cut(s) 62
PsyI GACNNNGTC 2 cut(s) 192, 511
PteI GCGCGC 4 cut(s) 133, 162, 164, 924
PvuI CGATCG 2 cut(s) 182, 268
RsaI GTAC 3 cut(s) 158, 398, 977
RsaNI GTAC 3 cut(s) 157, 397, 976
Rsr2I CGGWCCG 2 cut(s) 273, 573
RsrII CGGWCCG 2 cut(s) 273, 573
SacI GAGCTC 1 cut(s) 114
SacII CCGCGG 1 cut(s) 202
SalI GTCGAC 1 cut(s) 186
SatI GCNGC 9 cut(s) 169, 229, 232, 235, 463, 579, 889, 916, 1068
Sau3AI GATC 4 cut(s) 28, 62, 179, 265
Sau96I GGNCC 9 cut(s) 98, 249, 273, 513, 567, 568, 573, 1023, 1031
SchI GAGTC 4 cut(s) 353, 476, 757, 865
SduI GDGCHC 8 cut(s) 114, 522, 532, 571, 725, 903, 994, 1018
SetI ASST 8 cut(s) 37, 79, 114, 554, 638, 818, 1042, 1077
SfaNI GCATC 2 cut(s) 318, 817
SfoI GGCGCC 2 cut(s) 547, 622
Sfr274I CTCGAG 1 cut(s) 55
Sfr303I CCGCGG 1 cut(s) 202
SfuI TTCGAA 1 cut(s) 608
SgrAI CRCCGGYG 1 cut(s) 962
SgrBI CCGCGG 1 cut(s) 202
SgrDI CGTCGACG 1 cut(s) 186
SinI GGWCC 4 cut(s) 249, 273, 513, 573
SlaI CTCGAG 1 cut(s) 55
SmaI CCCGGG 3 cut(s) 219, 983, 997
SmlI CTYRAG 2 cut(s) 55, 631
SmoI CTYRAG 2 cut(s) 55, 631
SrfI GCCCGGGC 1 cut(s) 219
Sse9I AATT 4 cut(s) 341, 442, 604, 787
SspDI GGCGCC 2 cut(s) 545, 620
SspMI CTAG 1 cut(s) 666
SstI GAGCTC 1 cut(s) 114
StyI CCWWGG 2 cut(s) 433, 945
TaaI ACNGT 2 cut(s) 288, 905
TaiI ACGT 2 cut(s) 818, 1042
TaqI TCGA 8 cut(s) 12, 56, 187, 283, 608, 766, 825, 1078
TaqII GACCGA 3 cut(s) 27, 237, 401
TasI AATT 4 cut(s) 341, 442, 604, 787
TauI GCSGC 6 cut(s) 231, 234, 237, 581, 891, 918
TfiI GAWTC 3 cut(s) 627, 672, 780
TscAI CASTG 1 cut(s) 563
TseFI GTSAC 1 cut(s) 703
TseI GCWGC 3 cut(s) 168, 462, 1067
Tsp45I GTSAC 1 cut(s) 703
TspDTI ATGAA 2 cut(s) 370, 811
TspGWI ACGGA 2 cut(s) 107, 835
TspMI CCCGGG 3 cut(s) 217, 981, 995
TspRI CASTG 1 cut(s) 563
Tth111I GACNNNGTC 2 cut(s) 192, 511
VneI GTGCAC 1 cut(s) 899
VpaK11BI GGWCC 4 cut(s) 249, 273, 513, 573
XapI RAATTY 1 cut(s) 442
XhoI CTCGAG 1 cut(s) 55
XmaI CCCGGG 3 cut(s) 217, 981, 995
XmiI GTMKAC 1 cut(s) 187
XmnI GAANNNNTTC 1 cut(s) 1049
XspI CTAG 1 cut(s) 666
ZraI GACGTC 1 cut(s) 1040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.