Rroxscaffold_62G00437970

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000062
OG0000037
Physical Location & Seq
Reverse (-)
129685 .. 133005
3321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_62G00437970.1

Sequence Viewer

Length: 873 bp
ATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCCCTCGGACGGAATTTACCGCCCGATCGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCTTCCAGGGGACTTGTTCCCGTCCGCCTCTCGAGGACGCTTCTCCGTACTACAATTCGGACGCCTTACGACGCCGCATTCTCAAGCCGGGCTATTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTTTCCTTGGCGCAATTCACGCCGGTGTTCAGCACGCCCGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCGCCGTTGAAACATGTTCTCGACAAGCATATGACTACCGGCAGGATCAACCAGGTAGCATTCCTTTGACAACGCCGGCACCGCGTAGGGAGACCCCGCAACGAGCACAGCAGCCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAGGCATGCCAATGCAAGGGGCACAGCACTACTACGATGTCCTTCCCCTAACCGAATGGCTCAGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

290

Amino Acids

31.82

Weight (kDa)

10.11

Isoelectric Point (pI)

59.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 57, 676
AccB1I GGYRCC 3 cut(s) 260, 601, 850
AccI GTMKAC 2 cut(s) 48, 841
AccII CGCG 2 cut(s) 45, 607
AclWI GGATC 1 cut(s) 576
AcoI YGGCCR 1 cut(s) 86
AcsI RAATTY 1 cut(s) 158
AcyI GRCGYC 5 cut(s) 54, 261, 326, 336, 673
AfaI GTAC 2 cut(s) 313, 641
AfiI CCNNNNNNNGG 8 cut(s) 84, 154, 174, 270, 271, 272, 750, 779
AflIII ACRYGT 2 cut(s) 536, 642
AgsI TTSAA 2 cut(s) 533, 665
AjnI CCWGG 3 cut(s) 269, 574, 735
AleI CACNNNNGTG 1 cut(s) 414
Alw21I GWGCWC 2 cut(s) 631, 758
Alw26I GTCTC 4 cut(s) 11, 61, 608, 713
Alw44I GTGCAC 1 cut(s) 754
AlwI GGATC 1 cut(s) 576
Ama87I CYCGRG 3 cut(s) 118, 295, 429
AoxI GGCC 1 cut(s) 86
ApaLI GTGCAC 1 cut(s) 754
ApeKI GCWGC 3 cut(s) 29, 178, 634
ApoI RAATTY 1 cut(s) 158
AspA2I CCTAGG 1 cut(s) 485
AspLEI GCGC 6 cut(s) 25, 212, 263, 404, 449, 501
AspS9I GGNCC 3 cut(s) 109, 133, 228
AsuC2I CCSGG 6 cut(s) 79, 232, 353, 363, 430, 431
AsuHPI GGTGA 1 cut(s) 241
AvaI CYCGRG 3 cut(s) 118, 295, 429
AvaII GGWCC 3 cut(s) 109, 133, 228
AvrII CCTAGG 1 cut(s) 485
BaeGI GKGCMC 3 cut(s) 237, 758, 787
BanI GGYRCC 3 cut(s) 260, 601, 850
BanII GRGCYC 1 cut(s) 247
BauI CACGAG 1 cut(s) 214
Bbv12I GWGCWC 2 cut(s) 631, 758
BbvI GCAGC 3 cut(s) 16, 165, 646
BceAI ACGGC 4 cut(s) 36, 359, 512, 622
BciT130I CCWGG 3 cut(s) 271, 576, 737
BciVI GTATCC 1 cut(s) 724
BcnI CCSGG 6 cut(s) 79, 232, 353, 363, 430, 431
BcoDI GTCTC 4 cut(s) 11, 61, 608, 713
BfaI CTAG 2 cut(s) 486, 648
BfoI RGCGCY 2 cut(s) 213, 264
BfuI GTATCC 1 cut(s) 724
BglI GCCNNNNNGGC 1 cut(s) 20
BisI GCNGC 8 cut(s) 30, 89, 92, 95, 179, 339, 507, 635
BlnI CCTAGG 1 cut(s) 485
BlsI GCNGC 8 cut(s) 31, 90, 93, 96, 180, 340, 508, 636
Bme1390I CCNGG 9 cut(s) 79, 232, 271, 353, 363, 430, 431, 576, 737
Bme18I GGWCC 3 cut(s) 109, 133, 228
BmeT110I CYCGRG 3 cut(s) 118, 295, 429
BmgT120I GGNCC 3 cut(s) 109, 133, 228
BmiI GGNNCC 4 cut(s) 262, 603, 742, 852
BmrFI CCNGG 9 cut(s) 79, 232, 271, 353, 363, 430, 431, 576, 737
Bpu10I CCTNAGC 1 cut(s) 824
BpuEI CTTGAG 1 cut(s) 331
BpuMI CCSGG 6 cut(s) 79, 232, 353, 363, 430, 431
BsaHI GRCGYC 5 cut(s) 54, 261, 326, 336, 673
BsaI GGTCTC 1 cut(s) 608
BsaJI CCNNGG 7 cut(s) 60, 149, 270, 397, 429, 485, 736
BsaXI ACNNNNNCTCC 2 cut(s) 41, 71
Bsc4I CCNNNNNNNGG 8 cut(s) 84, 154, 174, 270, 271, 272, 750, 779
Bse118I RCCGGY 4 cut(s) 135, 413, 561, 598
BseBI CCWGG 3 cut(s) 271, 576, 737
BseDI CCNNGG 7 cut(s) 60, 149, 270, 397, 429, 485, 736
BseLI CCNNNNNNNGG 8 cut(s) 84, 154, 174, 270, 271, 272, 750, 779
BseMII CTCAG 1 cut(s) 838
BseSI GKGCMC 3 cut(s) 237, 758, 787
BseXI GCAGC 3 cut(s) 16, 165, 646
Bsh1236I CGCG 2 cut(s) 45, 607
Bsh1285I CGRYCG 1 cut(s) 173
BshFI GGCC 1 cut(s) 88
BshNI GGYRCC 3 cut(s) 260, 601, 850
BsiEI CGRYCG 1 cut(s) 173
BsiHKAI GWGCWC 2 cut(s) 631, 758
BsiHKCI CYCGRG 3 cut(s) 118, 295, 429
BsiSI CCGG 9 cut(s) 79, 136, 231, 352, 363, 414, 430, 562, 599
BslFI GGGAC 1 cut(s) 288
BslI CCNNNNNNNGG 8 cut(s) 84, 154, 174, 270, 271, 272, 750, 779
BsmAI GTCTC 4 cut(s) 11, 61, 608, 713
BsmBI CGTCTC 2 cut(s) 11, 61
BsmFI GGGAC 1 cut(s) 288
BsmI GAATGC 3 cut(s) 181, 341, 582
BsnI GGCC 1 cut(s) 88
Bso31I GGTCTC 1 cut(s) 608
BsoBI CYCGRG 3 cut(s) 118, 295, 429
Bsp1286I GDGCHC 5 cut(s) 237, 247, 631, 758, 787
Bsp143I GATC 4 cut(s) 40, 170, 440, 568
BspANI GGCC 1 cut(s) 88
BspCNI CTCAG 1 cut(s) 837
BspFNI CGCG 2 cut(s) 45, 607
BspLI GGNNCC 4 cut(s) 262, 603, 742, 852
BspPI GGATC 1 cut(s) 576
BspT107I GGYRCC 3 cut(s) 260, 601, 850
BspTNI GGTCTC 1 cut(s) 608
BsrFI RCCGGY 4 cut(s) 135, 413, 561, 598
BssAI RCCGGY 4 cut(s) 135, 413, 561, 598
BssECI CCNNGG 7 cut(s) 60, 149, 270, 397, 429, 485, 736
BssMI GATC 4 cut(s) 40, 170, 440, 568
BssNI GRCGYC 5 cut(s) 54, 261, 326, 336, 673
BssSI CACGAG 1 cut(s) 214
BssT1I CCWWGG 2 cut(s) 397, 485
Bst2BI CACGAG 1 cut(s) 214
Bst2UI CCWGG 3 cut(s) 271, 576, 737
Bst4CI ACNGT 2 cut(s) 109, 745
BstACI GRCGYC 5 cut(s) 54, 261, 326, 336, 673
BstC8I GCNNGC 7 cut(s) 12, 27, 372, 426, 451, 600, 770
BstDEI CTNAG 2 cut(s) 381, 824
BstDSI CCRYGG 1 cut(s) 60
BstFNI CGCG 2 cut(s) 45, 607
BstH2I RGCGCY 2 cut(s) 213, 264
BstHHI GCGC 6 cut(s) 25, 212, 263, 404, 449, 501
BstKTI GATC 4 cut(s) 43, 173, 443, 571
BstMAI GTCTC 4 cut(s) 11, 61, 608, 713
BstMBI GATC 4 cut(s) 40, 170, 440, 568
BstMCI CGRYCG 1 cut(s) 173
BstMWI GCNNNNNNNGC 7 cut(s) 20, 29, 88, 94, 209, 410, 604
BstNI CCWGG 3 cut(s) 271, 576, 737
BstNSI RCATGY 4 cut(s) 29, 540, 646, 772
BstSCI CCNGG 9 cut(s) 77, 230, 269, 351, 361, 428, 429, 574, 735
BstSLI GKGCMC 3 cut(s) 237, 758, 787
BstUI CGCG 2 cut(s) 45, 607
BstV1I GCAGC 3 cut(s) 16, 165, 646
BsuI GTATCC 1 cut(s) 724
BsuRI GGCC 1 cut(s) 88
BtgI CCRYGG 1 cut(s) 60
Cac8I GCNNGC 7 cut(s) 12, 27, 372, 426, 451, 600, 770
CfoI GCGC 6 cut(s) 25, 212, 263, 404, 449, 501
Cfr10I RCCGGY 4 cut(s) 135, 413, 561, 598
Cfr13I GGNCC 3 cut(s) 109, 133, 228
Cfr9I CCCGGG 1 cut(s) 429
CpoI CGGWCCG 1 cut(s) 133
CseI GACGC 4 cut(s) 34, 310, 334, 344
CsiI ACCWGGT 1 cut(s) 574
Csp6I GTAC 2 cut(s) 312, 640
CspI CGGWCCG 1 cut(s) 133
CviAII CATG 5 cut(s) 26, 38, 537, 643, 769
CviQI GTAC 2 cut(s) 312, 640
DdeI CTNAG 2 cut(s) 381, 824
DinI GGCGCC 1 cut(s) 262
DpnI GATC 4 cut(s) 42, 172, 442, 570
DpnII GATC 4 cut(s) 40, 170, 440, 568
EaeI YGGCCR 1 cut(s) 86
EciI GGCGGA 3 cut(s) 146, 278, 508
Eco130I CCWWGG 2 cut(s) 397, 485
Eco24I GRGCYC 1 cut(s) 247
Eco31I GGTCTC 1 cut(s) 608
Eco47I GGWCC 3 cut(s) 109, 133, 228
Eco88I CYCGRG 3 cut(s) 118, 295, 429
EcoRII CCWGG 3 cut(s) 269, 574, 735
EcoT14I CCWWGG 2 cut(s) 397, 485
EcoT38I GRGCYC 1 cut(s) 247
EgeI GGCGCC 1 cut(s) 262
EheI GGCGCC 1 cut(s) 262
ErhI CCWWGG 2 cut(s) 397, 485
Esp3I CGTCTC 2 cut(s) 11, 61
FaeI CATG 5 cut(s) 29, 41, 540, 646, 772
FaiI YATR 9 cut(s) 27, 39, 68, 258, 538, 553, 555, 644, 770
FaqI GGGAC 1 cut(s) 288
FatI CATG 5 cut(s) 25, 37, 536, 642, 768
FauI CCCGC 2 cut(s) 532, 627
FauNDI CATATG 1 cut(s) 553
FblI GTMKAC 2 cut(s) 48, 841
Fnu4HI GCNGC 8 cut(s) 30, 89, 92, 95, 179, 339, 507, 635
FriOI GRGCYC 1 cut(s) 247
Fsp4HI GCNGC 8 cut(s) 30, 89, 92, 95, 179, 339, 507, 635
FspBI CTAG 2 cut(s) 486, 648
GlaI GCGC 6 cut(s) 24, 211, 262, 403, 448, 500
GluI GCNGC 8 cut(s) 30, 89, 92, 95, 179, 339, 507, 635
HaeII RGCGCY 2 cut(s) 213, 264
HaeIII GGCC 1 cut(s) 88
HapII CCGG 9 cut(s) 79, 136, 231, 352, 363, 414, 430, 562, 599
HgaI GACGC 4 cut(s) 34, 310, 334, 344
HhaI GCGC 6 cut(s) 25, 212, 263, 404, 449, 501
Hin1I GRCGYC 5 cut(s) 54, 261, 326, 336, 673
Hin1II CATG 5 cut(s) 29, 41, 540, 646, 772
Hin6I GCGC 6 cut(s) 23, 210, 261, 402, 447, 499
HinP1I GCGC 6 cut(s) 23, 210, 261, 402, 447, 499
HincII GTYRAC 2 cut(s) 49, 842
HindII GTYRAC 2 cut(s) 49, 842
HinfI GANTC 3 cut(s) 121, 198, 387
HpaII CCGG 9 cut(s) 79, 136, 231, 352, 363, 414, 430, 562, 599
HphI GGTGA 1 cut(s) 241
Hpy166II GTNNAC 4 cut(s) 49, 112, 756, 842
Hpy188I TCNGA 3 cut(s) 153, 324, 718
Hpy188III TCNNGA 2 cut(s) 295, 543
Hpy8I GTNNAC 4 cut(s) 49, 112, 756, 842
Hpy99I CGWCG 5 cut(s) 50, 53, 56, 338, 749
HpyAV CCTTC 3 cut(s) 276, 815, 824
HpyCH4III ACNGT 2 cut(s) 109, 745
HpyCH4IV ACGT 2 cut(s) 54, 673
HpyCH4V TGCA 5 cut(s) 181, 463, 684, 756, 778
HpyF10VI GCNNNNNNNGC 7 cut(s) 20, 29, 88, 94, 209, 410, 604
HpyF3I CTNAG 2 cut(s) 381, 824
HpySE526I ACGT 2 cut(s) 54, 673
Hsp92I GRCGYC 5 cut(s) 54, 261, 326, 336, 673
Hsp92II CATG 5 cut(s) 29, 41, 540, 646, 772
HspAI GCGC 6 cut(s) 23, 210, 261, 402, 447, 499
KasI GGCGCC 1 cut(s) 260
KroI GCCGGC 1 cut(s) 598
KroNI GCCGGC 1 cut(s) 600
Kzo9I GATC 4 cut(s) 40, 170, 440, 568
Lsp1109I GCAGC 3 cut(s) 16, 165, 646
MabI ACCWGGT 1 cut(s) 574
MaeI CTAG 2 cut(s) 486, 648
MaeII ACGT 2 cut(s) 54, 673
MaeIII GTNAC 3 cut(s) 103, 142, 376
MalI GATC 4 cut(s) 42, 172, 442, 570
MboI GATC 4 cut(s) 40, 170, 440, 568
MhlI GDGCHC 5 cut(s) 237, 247, 631, 758, 787
MluCI AATT 4 cut(s) 158, 318, 405, 666
Mly113I GGCGCC 1 cut(s) 261
MlyI GAGTC 2 cut(s) 130, 192
MnlI CCTC 9 cut(s) 159, 223, 263, 291, 302, 427, 492, 526, 841
MroNI GCCGGC 1 cut(s) 598
MslI CAYNNNNRTG 3 cut(s) 414, 458, 773
MspI CCGG 9 cut(s) 79, 136, 231, 352, 363, 414, 430, 562, 599
MspR9I CCNGG 9 cut(s) 79, 232, 271, 353, 363, 430, 431, 576, 737
Mva1269I GAATGC 3 cut(s) 181, 341, 582
MvaI CCWGG 3 cut(s) 271, 576, 737
MvnI CGCG 2 cut(s) 45, 607
MwoI GCNNNNNNNGC 7 cut(s) 20, 29, 88, 94, 209, 410, 604
NaeI GCCGGC 1 cut(s) 600
NarI GGCGCC 1 cut(s) 261
NciI CCSGG 6 cut(s) 79, 232, 353, 363, 430, 431
NdeI CATATG 1 cut(s) 553
NdeII GATC 4 cut(s) 40, 170, 440, 568
NgoMIV GCCGGC 1 cut(s) 598
NlaIII CATG 5 cut(s) 29, 41, 540, 646, 772
NlaIV GGNNCC 4 cut(s) 262, 603, 742, 852
NmeAIII GCCGAG 1 cut(s) 40
NmuCI GTSAC 1 cut(s) 142
NspI RCATGY 4 cut(s) 29, 540, 646, 772
OliI CACNNNNGTG 1 cut(s) 414
PaeI GCATGC 2 cut(s) 29, 772
PaeR7I CTCGAG 1 cut(s) 295
PciI ACATGT 2 cut(s) 536, 642
PctI GAATGC 3 cut(s) 181, 341, 582
PdiI GCCGGC 1 cut(s) 600
PfeI GAWTC 1 cut(s) 387
PflFI GACNNNGTC 1 cut(s) 53
PkrI GCNGC 8 cut(s) 31, 90, 93, 96, 180, 340, 508, 636
Ple19I CGATCG 1 cut(s) 173
PleI GAGTC 2 cut(s) 129, 192
PluTI GGCGCC 1 cut(s) 264
PpsI GAGTC 2 cut(s) 129, 192
PscI ACATGT 2 cut(s) 536, 642
Psp6I CCWGG 3 cut(s) 269, 574, 735
PspGI CCWGG 3 cut(s) 269, 574, 735
PspN4I GGNNCC 4 cut(s) 262, 603, 742, 852
PspPI GGNCC 3 cut(s) 109, 133, 228
PsyI GACNNNGTC 1 cut(s) 53
PvuI CGATCG 1 cut(s) 173
RsaI GTAC 2 cut(s) 313, 641
RsaNI GTAC 2 cut(s) 312, 640
RseI CAYNNNNRTG 3 cut(s) 414, 458, 773
Rsr2I CGGWCCG 1 cut(s) 133
RsrII CGGWCCG 1 cut(s) 133
SalI GTCGAC 2 cut(s) 47, 840
SatI GCNGC 8 cut(s) 30, 89, 92, 95, 179, 339, 507, 635
Sau3AI GATC 4 cut(s) 40, 170, 440, 568
Sau96I GGNCC 3 cut(s) 109, 133, 228
SchI GAGTC 2 cut(s) 130, 192
ScrFI CCNGG 9 cut(s) 79, 232, 271, 353, 363, 430, 431, 576, 737
SduI GDGCHC 5 cut(s) 237, 247, 631, 758, 787
SetI ASST 7 cut(s) 57, 230, 580, 676, 738, 755, 872
SexAI ACCWGGT 1 cut(s) 574
SfoI GGCGCC 1 cut(s) 262
Sfr274I CTCGAG 1 cut(s) 295
SgrAI CRCCGGYG 1 cut(s) 413
SgrDI CGTCGACG 1 cut(s) 47
SinI GGWCC 3 cut(s) 109, 133, 228
SlaI CTCGAG 1 cut(s) 295
SmaI CCCGGG 1 cut(s) 431
SmiMI CAYNNNNRTG 3 cut(s) 414, 458, 773
SmlI CTYRAG 2 cut(s) 295, 346
SmoI CTYRAG 2 cut(s) 295, 346
SphI GCATGC 2 cut(s) 29, 772
Sse9I AATT 4 cut(s) 158, 318, 405, 666
SspDI GGCGCC 1 cut(s) 260
SspMI CTAG 2 cut(s) 486, 648
StyD4I CCNGG 9 cut(s) 77, 230, 269, 351, 361, 428, 429, 574, 735
StyI CCWWGG 2 cut(s) 397, 485
TaaI ACNGT 2 cut(s) 109, 745
TaiI ACGT 2 cut(s) 57, 676
TaqI TCGA 6 cut(s) 48, 124, 296, 439, 544, 841
TasI AATT 4 cut(s) 158, 318, 405, 666
TauI GCSGC 5 cut(s) 91, 94, 97, 341, 509
TfiI GAWTC 1 cut(s) 387
TseFI GTSAC 1 cut(s) 142
TseI GCWGC 3 cut(s) 29, 178, 634
Tsp45I GTSAC 1 cut(s) 142
TspGWI ACGGA 3 cut(s) 91, 170, 299
TspMI CCCGGG 1 cut(s) 429
Tth111I GACNNNGTC 1 cut(s) 53
VneI GTGCAC 1 cut(s) 754
VpaK11BI GGWCC 3 cut(s) 109, 133, 228
XapI RAATTY 1 cut(s) 158
XceI RCATGY 4 cut(s) 29, 540, 646, 772
XhoI CTCGAG 1 cut(s) 295
XmaI CCCGGG 1 cut(s) 429
XmaJI CCTAGG 1 cut(s) 485
XmiI GTMKAC 2 cut(s) 48, 841
XspI CTAG 2 cut(s) 486, 648
ZraI GACGTC 2 cut(s) 55, 674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.