Rroxscaffold_20G00445120

Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000020
OG0000037
Physical Location & Seq
Reverse (-)
81816 .. 83284
1469 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_20G00445120.1

Sequence Viewer

Length: 1065 bp
ATGCTCACACTCGAACCCTTCTCGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAATGGGAGCCCGCAGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGCCCCCATCCGCTTCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCGAGGACGCTTCTCCGGACTACAATTCGGACGCCTTACGACGCCAGATTCTCAAGCCGGGCTATTCCCGTTCGCTCGCCGTTACTAAGGGAATCCTTAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGACGGCGGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCTGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCGGCGTTGAAACATGTTCTCGGGTCGTTCTGCTAGGCAGGGTTTCGACAATGATCCTTCCGCAGTTCACCTACGGGAAACCTTGTTACGACTTCTCCTTCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

354

Amino Acids

39.46

Weight (kDa)

10.73

Isoelectric Point (pI)

52.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
AatII GACGTC 1 cut(s) 246
AbsI CCTCGAGG 1 cut(s) 626
AccB1I GGYRCC 1 cut(s) 592
AccI GTMKAC 2 cut(s) 123, 237
AccII CGCG 2 cut(s) 234, 441
AccIII TCCGGA 2 cut(s) 640, 797
AclWI GGATC 3 cut(s) 55, 68, 1006
AcoI YGGCCR 1 cut(s) 275
AcsI RAATTY 1 cut(s) 489
AcyI GRCGYC 4 cut(s) 243, 593, 657, 667
AfaI GTAC 2 cut(s) 445, 860
AfiI CCNNNNNNNGG 9 cut(s) 57, 177, 273, 505, 602, 603, 604, 628, 804
AflIII ACRYGT 2 cut(s) 118, 971
AgsI TTSAA 6 cut(s) 144, 394, 417, 764, 826, 968
AjnI CCWGG 3 cut(s) 176, 601, 863
AleI CACNNNNGTG 1 cut(s) 849
AluBI AGCT 1 cut(s) 75
AluI AGCT 1 cut(s) 75
Alw21I GWGCWC 2 cut(s) 50, 185
Alw26I GTCTC 4 cut(s) 200, 250, 466, 799
Alw44I GTGCAC 1 cut(s) 46
AlwI GGATC 3 cut(s) 55, 68, 1006
Ama87I CYCGRG 3 cut(s) 307, 626, 978
Aor13HI TCCGGA 2 cut(s) 640, 797
AoxI GGCC 2 cut(s) 150, 275
ApaLI GTGCAC 1 cut(s) 46
ApeKI GCWGC 3 cut(s) 167, 218, 509
ApoI RAATTY 1 cut(s) 489
AspA2I CCTAGG 1 cut(s) 920
AspLEI GCGC 8 cut(s) 85, 214, 358, 543, 595, 839, 884, 936
AspS9I GGNCC 6 cut(s) 133, 150, 298, 322, 560, 619
AsuC2I CCSGG 5 cut(s) 268, 564, 617, 684, 960
AsuHPI GGTGA 4 cut(s) 92, 573, 781, 1018
AvaI CYCGRG 3 cut(s) 307, 626, 978
AvaII GGWCC 5 cut(s) 133, 298, 322, 560, 619
AvrII CCTAGG 1 cut(s) 920
BaeGI GKGCMC 2 cut(s) 50, 569
BamHI GGATCC 1 cut(s) 60
BanI GGYRCC 1 cut(s) 592
BanII GRGCYC 2 cut(s) 165, 579
BauI CACGAG 1 cut(s) 545
BbsI GAAGAC 1 cut(s) 771
Bbv12I GWGCWC 2 cut(s) 50, 185
BbvI GCAGC 3 cut(s) 179, 205, 496
BccI CCATC 1 cut(s) 378
BceAI ACGGC 4 cut(s) 155, 225, 689, 818
BcgI CGANNNNNNTGC 2 cut(s) 103, 137
BciT130I CCWGG 3 cut(s) 178, 603, 865
BcnI CCSGG 5 cut(s) 268, 564, 617, 684, 960
BcoDI GTCTC 4 cut(s) 200, 250, 466, 799
BfaI CTAG 2 cut(s) 921, 992
BfoI RGCGCY 2 cut(s) 544, 596
BglI GCCNNNNNGGC 1 cut(s) 209
BisI GCNGC 8 cut(s) 168, 219, 278, 281, 284, 364, 510, 942
BlnI CCTAGG 1 cut(s) 920
BlsI GCNGC 8 cut(s) 169, 220, 279, 282, 285, 365, 511, 943
Bme1390I CCNGG 8 cut(s) 178, 268, 564, 603, 617, 684, 865, 960
Bme18I GGWCC 5 cut(s) 133, 298, 322, 560, 619
BmeT110I CYCGRG 3 cut(s) 307, 626, 978
BmgT120I GGNCC 6 cut(s) 133, 150, 298, 322, 560, 619
BmiI GGNNCC 4 cut(s) 62, 162, 561, 594
BmrFI CCNGG 8 cut(s) 178, 268, 564, 603, 617, 684, 865, 960
BmsI GCATC 2 cut(s) 180, 367
BpiI GAAGAC 1 cut(s) 771
Bpu10I CCTNAGC 1 cut(s) 722
BpuEI CTTGAG 1 cut(s) 662
BpuMI CCSGG 5 cut(s) 268, 564, 617, 684, 960
BsaHI GRCGYC 4 cut(s) 243, 593, 657, 667
BsaI GGTCTC 1 cut(s) 466
BsaJI CCNNGG 9 cut(s) 129, 249, 351, 480, 602, 832, 864, 920, 958
BsaWI WCCGGW 2 cut(s) 640, 797
BsaXI ACNNNNNCTCC 3 cut(s) 230, 260, 1037
Bsc4I CCNNNNNNNGG 9 cut(s) 57, 177, 273, 505, 602, 603, 604, 628, 804
Bse118I RCCGGY 2 cut(s) 324, 848
BseAI TCCGGA 2 cut(s) 640, 797
BseBI CCWGG 3 cut(s) 178, 603, 865
BseDI CCNNGG 9 cut(s) 129, 249, 351, 480, 602, 832, 864, 920, 958
BseGI GGATG 2 cut(s) 343, 370
BseLI CCNNNNNNNGG 9 cut(s) 57, 177, 273, 505, 602, 603, 604, 628, 804
BseSI GKGCMC 2 cut(s) 50, 569
BseXI GCAGC 3 cut(s) 179, 205, 496
Bsh1236I CGCG 2 cut(s) 234, 441
Bsh1285I CGRYCG 2 cut(s) 40, 351
BshFI GGCC 2 cut(s) 152, 277
BshNI GGYRCC 1 cut(s) 592
BsiEI CGRYCG 2 cut(s) 40, 351
BsiHKAI GWGCWC 2 cut(s) 50, 185
BsiHKCI CYCGRG 3 cut(s) 307, 626, 978
BsiSI CCGG 9 cut(s) 268, 325, 563, 617, 641, 683, 798, 849, 960
BslFI GGGAC 1 cut(s) 620
BslI CCNNNNNNNGG 9 cut(s) 57, 177, 273, 505, 602, 603, 604, 628, 804
BsmAI GTCTC 4 cut(s) 200, 250, 466, 799
BsmBI CGTCTC 3 cut(s) 200, 250, 799
BsmFI GGGAC 1 cut(s) 620
BsmI GAATGC 1 cut(s) 512
BsnI GGCC 2 cut(s) 152, 277
Bso31I GGTCTC 1 cut(s) 466
BsoBI CYCGRG 3 cut(s) 307, 626, 978
Bsp1286I GDGCHC 5 cut(s) 50, 165, 185, 569, 579
Bsp13I TCCGGA 2 cut(s) 640, 797
Bsp143I GATC 6 cut(s) 27, 60, 229, 786, 875, 1011
BspANI GGCC 2 cut(s) 152, 277
BspEI TCCGGA 2 cut(s) 640, 797
BspFNI CGCG 2 cut(s) 234, 441
BspLI GGNNCC 4 cut(s) 62, 162, 561, 594
BspPI GGATC 3 cut(s) 55, 68, 1006
BspT107I GGYRCC 1 cut(s) 592
BspTNI GGTCTC 1 cut(s) 466
BsrFI RCCGGY 2 cut(s) 324, 848
BssAI RCCGGY 2 cut(s) 324, 848
BssECI CCNNGG 9 cut(s) 129, 249, 351, 480, 602, 832, 864, 920, 958
BssMI GATC 6 cut(s) 27, 60, 229, 786, 875, 1011
BssNI GRCGYC 4 cut(s) 243, 593, 657, 667
BssSI CACGAG 1 cut(s) 545
BssT1I CCWWGG 4 cut(s) 129, 480, 832, 920
Bst2BI CACGAG 1 cut(s) 545
Bst2UI CCWGG 3 cut(s) 178, 603, 865
Bst4CI ACNGT 3 cut(s) 298, 337, 793
BstACI GRCGYC 4 cut(s) 243, 593, 657, 667
BstC8I GCNNGC 6 cut(s) 165, 185, 201, 216, 702, 886
BstDEI CTNAG 2 cut(s) 711, 722
BstDSI CCRYGG 1 cut(s) 249
BstF5I GGATG 2 cut(s) 343, 370
BstFNI CGCG 2 cut(s) 234, 441
BstH2I RGCGCY 2 cut(s) 544, 596
BstHHI GCGC 8 cut(s) 85, 214, 358, 543, 595, 839, 884, 936
BstKTI GATC 6 cut(s) 30, 63, 232, 789, 878, 1014
BstMAI GTCTC 4 cut(s) 200, 250, 466, 799
BstMBI GATC 6 cut(s) 27, 60, 229, 786, 875, 1011
BstMCI CGRYCG 2 cut(s) 40, 351
BstMWI GCNNNNNNNGC 6 cut(s) 209, 218, 277, 283, 540, 845
BstNI CCWGG 3 cut(s) 178, 603, 865
BstNSI RCATGY 3 cut(s) 122, 218, 975
BstSCI CCNGG 8 cut(s) 176, 266, 562, 601, 615, 682, 863, 958
BstSLI GKGCMC 2 cut(s) 50, 569
BstUI CGCG 2 cut(s) 234, 441
BstV1I GCAGC 3 cut(s) 179, 205, 496
BstV2I GAAGAC 1 cut(s) 771
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
BsuRI GGCC 2 cut(s) 152, 277
BtgI CCRYGG 1 cut(s) 249
BtgZI GCGATG 1 cut(s) 344
BtsCI GGATG 2 cut(s) 343, 370
Cac8I GCNNGC 6 cut(s) 165, 185, 201, 216, 702, 886
CfoI GCGC 8 cut(s) 85, 214, 358, 543, 595, 839, 884, 936
Cfr10I RCCGGY 2 cut(s) 324, 848
Cfr13I GGNCC 6 cut(s) 133, 150, 298, 322, 560, 619
CpoI CGGWCCG 2 cut(s) 322, 619
CseI GACGC 4 cut(s) 223, 641, 665, 675
Csp6I GTAC 2 cut(s) 444, 859
CspI CGGWCCG 2 cut(s) 322, 619
CviAII CATG 4 cut(s) 119, 215, 227, 972
CviQI GTAC 2 cut(s) 444, 859
DdeI CTNAG 2 cut(s) 711, 722
DinI GGCGCC 1 cut(s) 594
DpnI GATC 6 cut(s) 29, 62, 231, 788, 877, 1013
DpnII GATC 6 cut(s) 27, 60, 229, 786, 875, 1011
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 1 cut(s) 275
EciI GGCGGA 3 cut(s) 335, 611, 943
Eco130I CCWWGG 4 cut(s) 129, 480, 832, 920
Eco24I GRGCYC 2 cut(s) 165, 579
Eco31I GGTCTC 1 cut(s) 466
Eco32I GATATC 1 cut(s) 733
Eco47I GGWCC 5 cut(s) 133, 298, 322, 560, 619
Eco88I CYCGRG 3 cut(s) 307, 626, 978
EcoRII CCWGG 3 cut(s) 176, 601, 863
EcoRV GATATC 1 cut(s) 733
EcoT14I CCWWGG 4 cut(s) 129, 480, 832, 920
EcoT38I GRGCYC 2 cut(s) 165, 579
EgeI GGCGCC 1 cut(s) 594
EheI GGCGCC 1 cut(s) 594
ErhI CCWWGG 4 cut(s) 129, 480, 832, 920
Esp3I CGTCTC 3 cut(s) 200, 250, 799
FaeI CATG 4 cut(s) 122, 218, 230, 975
FaiI YATR 7 cut(s) 120, 216, 228, 257, 590, 759, 973
FaqI GGGAC 1 cut(s) 620
FatI CATG 4 cut(s) 118, 214, 226, 971
FauI CCCGC 5 cut(s) 59, 72, 172, 788, 798
FblI GTMKAC 2 cut(s) 123, 237
Fnu4HI GCNGC 8 cut(s) 168, 219, 278, 281, 284, 364, 510, 942
FokI GGATG 2 cut(s) 330, 357
FriOI GRGCYC 2 cut(s) 165, 579
Fsp4HI GCNGC 8 cut(s) 168, 219, 278, 281, 284, 364, 510, 942
FspBI CTAG 2 cut(s) 921, 992
GlaI GCGC 8 cut(s) 84, 213, 357, 542, 594, 838, 883, 935
GluI GCNGC 8 cut(s) 168, 219, 278, 281, 284, 364, 510, 942
HaeII RGCGCY 2 cut(s) 544, 596
HaeIII GGCC 2 cut(s) 152, 277
HapII CCGG 9 cut(s) 268, 325, 563, 617, 641, 683, 798, 849, 960
HgaI GACGC 4 cut(s) 223, 641, 665, 675
HhaI GCGC 8 cut(s) 85, 214, 358, 543, 595, 839, 884, 936
Hin1I GRCGYC 4 cut(s) 243, 593, 657, 667
Hin1II CATG 4 cut(s) 122, 218, 230, 975
Hin6I GCGC 8 cut(s) 83, 212, 356, 541, 593, 837, 882, 934
HinP1I GCGC 8 cut(s) 83, 212, 356, 541, 593, 837, 882, 934
HincII GTYRAC 3 cut(s) 108, 124, 238
HindII GTYRAC 3 cut(s) 108, 124, 238
HinfI GANTC 8 cut(s) 109, 125, 310, 406, 529, 673, 717, 746
HpaII CCGG 9 cut(s) 268, 325, 563, 617, 641, 683, 798, 849, 960
HphI GGTGA 4 cut(s) 92, 573, 781, 1018
Hpy166II GTNNAC 6 cut(s) 48, 108, 124, 238, 301, 1026
Hpy188I TCNGA 2 cut(s) 348, 655
Hpy188III TCNNGA 5 cut(s) 22, 144, 383, 641, 798
Hpy8I GTNNAC 6 cut(s) 48, 108, 124, 238, 301, 1026
Hpy99I CGWCG 5 cut(s) 239, 242, 245, 669, 773
HpyAV CCTTC 3 cut(s) 28, 608, 1025
HpyCH4III ACNGT 3 cut(s) 298, 337, 793
HpyCH4IV ACGT 1 cut(s) 243
HpyCH4V TGCA 3 cut(s) 48, 512, 898
HpyF10VI GCNNNNNNNGC 6 cut(s) 209, 218, 277, 283, 540, 845
HpyF3I CTNAG 2 cut(s) 711, 722
HpySE526I ACGT 1 cut(s) 243
Hsp92I GRCGYC 4 cut(s) 243, 593, 657, 667
Hsp92II CATG 4 cut(s) 122, 218, 230, 975
HspAI GCGC 8 cut(s) 83, 212, 356, 541, 593, 837, 882, 934
KasI GGCGCC 1 cut(s) 592
Kpn2I TCCGGA 2 cut(s) 640, 797
Kzo9I GATC 6 cut(s) 27, 60, 229, 786, 875, 1011
LmnI GCTCC 2 cut(s) 160, 180
Lsp1109I GCAGC 3 cut(s) 179, 205, 496
LweI GCATC 2 cut(s) 180, 367
MaeI CTAG 2 cut(s) 921, 992
MaeII ACGT 1 cut(s) 243
MaeIII GTNAC 5 cut(s) 172, 292, 331, 706, 1043
MalI GATC 6 cut(s) 29, 62, 231, 788, 877, 1013
MboI GATC 6 cut(s) 27, 60, 229, 786, 875, 1011
MboII GAAGA 2 cut(s) 37, 776
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 5 cut(s) 50, 165, 185, 569, 579
MluCI AATT 4 cut(s) 388, 489, 649, 840
Mly113I GGCGCC 1 cut(s) 593
MlyI GAGTC 6 cut(s) 103, 119, 319, 400, 523, 755
MmeI TCCRAC 1 cut(s) 371
MroI TCCGGA 2 cut(s) 640, 797
MseI TTAA 1 cut(s) 96
MslI CAYNNNNRTG 3 cut(s) 188, 849, 893
MspI CCGG 9 cut(s) 268, 325, 563, 617, 641, 683, 798, 849, 960
MspR9I CCNGG 8 cut(s) 178, 268, 564, 603, 617, 684, 865, 960
Mva1269I GAATGC 1 cut(s) 512
MvaI CCWGG 3 cut(s) 178, 603, 865
MvnI CGCG 2 cut(s) 234, 441
MwoI GCNNNNNNNGC 6 cut(s) 209, 218, 277, 283, 540, 845
NarI GGCGCC 1 cut(s) 593
NciI CCSGG 5 cut(s) 268, 564, 617, 684, 960
NdeII GATC 6 cut(s) 27, 60, 229, 786, 875, 1011
NlaIII CATG 4 cut(s) 122, 218, 230, 975
NlaIV GGNNCC 4 cut(s) 62, 162, 561, 594
NmeAIII GCCGAG 3 cut(s) 229, 752, 767
NmuCI GTSAC 1 cut(s) 331
NspI RCATGY 3 cut(s) 122, 218, 975
OliI CACNNNNGTG 1 cut(s) 849
PaeI GCATGC 1 cut(s) 218
PaeR7I CTCGAG 1 cut(s) 626
PciI ACATGT 2 cut(s) 118, 971
PcsI WCGNNNNNNNCGW 1 cut(s) 191
PctI GAATGC 1 cut(s) 512
PfeI GAWTC 2 cut(s) 673, 717
PflFI GACNNNGTC 2 cut(s) 242, 558
PkrI GCNGC 8 cut(s) 169, 220, 279, 282, 285, 365, 511, 943
PleI GAGTC 6 cut(s) 103, 119, 318, 400, 523, 754
PluTI GGCGCC 1 cut(s) 596
PpsI GAGTC 6 cut(s) 103, 119, 318, 400, 523, 754
PscI ACATGT 2 cut(s) 118, 971
Psp6I CCWGG 3 cut(s) 176, 601, 863
PspGI CCWGG 3 cut(s) 176, 601, 863
PspN4I GGNNCC 4 cut(s) 62, 162, 561, 594
PspPI GGNCC 6 cut(s) 133, 150, 298, 322, 560, 619
PspXI VCTCGAGB 1 cut(s) 626
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 2 cut(s) 242, 558
RsaI GTAC 2 cut(s) 445, 860
RsaNI GTAC 2 cut(s) 444, 859
RseI CAYNNNNRTG 3 cut(s) 188, 849, 893
Rsr2I CGGWCCG 2 cut(s) 322, 619
RsrII CGGWCCG 2 cut(s) 322, 619
SalI GTCGAC 2 cut(s) 122, 236
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 8 cut(s) 168, 219, 278, 281, 284, 364, 510, 942
Sau3AI GATC 6 cut(s) 27, 60, 229, 786, 875, 1011
Sau96I GGNCC 6 cut(s) 133, 150, 298, 322, 560, 619
SchI GAGTC 6 cut(s) 103, 119, 319, 400, 523, 755
ScrFI CCNGG 8 cut(s) 178, 268, 564, 603, 617, 684, 865, 960
SduI GDGCHC 5 cut(s) 50, 165, 185, 569, 579
SetI ASST 5 cut(s) 36, 77, 246, 1031, 1042
SfaNI GCATC 2 cut(s) 180, 367
SfoI GGCGCC 1 cut(s) 594
Sfr274I CTCGAG 1 cut(s) 626
SgrAI CRCCGGYG 1 cut(s) 848
SgrDI CGTCGACG 1 cut(s) 236
SinI GGWCC 5 cut(s) 133, 298, 322, 560, 619
SlaI CTCGAG 1 cut(s) 626
SmiMI CAYNNNNRTG 3 cut(s) 188, 849, 893
SmlI CTYRAG 2 cut(s) 626, 677
SmoI CTYRAG 2 cut(s) 626, 677
SphI GCATGC 1 cut(s) 218
Sse9I AATT 4 cut(s) 388, 489, 649, 840
SspDI GGCGCC 1 cut(s) 592
SspMI CTAG 2 cut(s) 921, 992
StyD4I CCNGG 8 cut(s) 176, 266, 562, 601, 615, 682, 863, 958
StyI CCWWGG 4 cut(s) 129, 480, 832, 920
TaaI ACNGT 3 cut(s) 298, 337, 793
TaiI ACGT 1 cut(s) 246
TaqI TCGA 8 cut(s) 12, 23, 123, 237, 313, 627, 874, 1004
TaqII GACCGA 3 cut(s) 26, 365, 448
TasI AATT 4 cut(s) 388, 489, 649, 840
TauI GCSGC 5 cut(s) 280, 283, 286, 366, 944
TfiI GAWTC 2 cut(s) 673, 717
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TseFI GTSAC 1 cut(s) 331
TseI GCWGC 3 cut(s) 167, 218, 509
Tsp45I GTSAC 1 cut(s) 331
TspDTI ATGAA 2 cut(s) 417, 810
TspGWI ACGGA 4 cut(s) 125, 280, 501, 725
Tth111I GACNNNGTC 2 cut(s) 242, 558
VneI GTGCAC 1 cut(s) 46
VpaK11BI GGWCC 5 cut(s) 133, 298, 322, 560, 619
XapI RAATTY 1 cut(s) 489
XceI RCATGY 3 cut(s) 122, 218, 975
XhoI CTCGAG 1 cut(s) 626
XmaJI CCTAGG 1 cut(s) 920
XmiI GTMKAC 2 cut(s) 123, 237
XspI CTAG 2 cut(s) 921, 992
ZraI GACGTC 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.