pycom520g01330

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_520
OG0000037
Physical Location & Seq
Forward (+)
1111492 .. 1113297
1806 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom520g01330.1

Sequence Viewer

Length: 1161 bp
ATGAGTACGACCGGGCGCGAACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCCAGGTTTTGCGGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCGCTTGCCCCGACGGCCGGGTGTAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCTCACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCAACCCTCGTGGGGATCCCGCCAGTCAGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAATGGGGAGCTCGCTGGCCGACGCCGGGAGCGCGCAGTTGCCGAAGCACGCCGGTACGGCGCGCGCTGCCCTCCACGATCGCGTCGACGGCGTCTCCGCGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCCGCAATCCGCGTCGGTCCACGCCCCGAGCCGATCGGCGGACCGGCTTTCGACCGTTCCACATCCGACCGGGGCGCATCGCCAGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCACCTTCCAGTGGACTTGGGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGACGGCGCCCGATTCTCAAGCTGGGCTGTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTCGTAAGTTTCTTTTCCTCCGCTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

387

Amino Acids

42.73

Weight (kDa)

11.81

Isoelectric Point (pI)

71.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 535
AccB1I GGYRCC 2 cut(s) 1001, 1076
AccB7I CCANNNNNTGG 1 cut(s) 101
AccBSI CCGCTC 2 cut(s) 235, 411
AccI GTMKAC 1 cut(s) 643
AccIII TCCGGA 1 cut(s) 36
AclWI GGATC 2 cut(s) 505, 518
AcoI YGGCCR 4 cut(s) 230, 314, 574, 682
AcsI RAATTY 1 cut(s) 898
AcuI CTGAAG 1 cut(s) 320
AcyI GRCGYC 4 cut(s) 580, 649, 1002, 1077
AfaI GTAC 4 cut(s) 7, 26, 614, 854
AgsI TTSAA 6 cut(s) 46, 182, 196, 548, 803, 826
AjiI CACGTC 1 cut(s) 81
AjnI CCWGG 3 cut(s) 129, 254, 296
AluBI AGCT 2 cut(s) 568, 1092
AluI AGCT 2 cut(s) 568, 1092
Alw21I GWGCWC 2 cut(s) 91, 570
Alw26I GTCTC 2 cut(s) 656, 875
AlwI GGATC 2 cut(s) 505, 518
AlwNI CAGNNNCTG 1 cut(s) 101
Ama87I CYCGRG 3 cut(s) 241, 673, 714
Aor13HI TCCGGA 1 cut(s) 36
ApaI GGGCCC 1 cut(s) 1027
ApeKI GCWGC 3 cut(s) 372, 624, 918
ApoI RAATTY 1 cut(s) 898
AsuHPI GGTGA 2 cut(s) 416, 982
AsuII TTCGAA 1 cut(s) 1064
AvaI CYCGRG 3 cut(s) 241, 673, 714
AvaII GGWCC 8 cut(s) 31, 104, 437, 537, 705, 729, 969, 1029
BaeGI GKGCMC 2 cut(s) 978, 1027
BamHI GGATCC 1 cut(s) 510
BanI GGYRCC 2 cut(s) 1001, 1076
BanII GRGCYC 4 cut(s) 248, 570, 988, 1027
BauI CACGAG 2 cut(s) 503, 954
Bbv12I GWGCWC 2 cut(s) 91, 570
BbvCI CCTCAGC 1 cut(s) 1038
BbvI GCAGC 3 cut(s) 359, 611, 905
BccI CCATC 3 cut(s) 351, 435, 786
BceAI ACGGC 8 cut(s) 108, 132, 245, 329, 631, 662, 1090, 1100
BcgI CGANNNNNNTGC 2 cut(s) 431, 465
BciT130I CCWGG 3 cut(s) 131, 256, 298
BcoDI GTCTC 2 cut(s) 656, 875
BfaI CTAG 2 cut(s) 359, 1122
BfoI RGCGCY 5 cut(s) 304, 343, 953, 1005, 1080
BglI GCCNNNNNGGC 2 cut(s) 313, 615
BglII AGATCT 1 cut(s) 217
BlpI GCTNAGC 1 cut(s) 119
Bme18I GGWCC 8 cut(s) 31, 104, 437, 537, 705, 729, 969, 1029
BmeT110I CYCGRG 3 cut(s) 241, 673, 714
BmgBI CACGTC 1 cut(s) 81
BmsI GCATC 1 cut(s) 774
BpmI CTGGAG 1 cut(s) 1035
Bpu10I CCTNAGC 2 cut(s) 412, 1038
Bpu1102I GCTNAGC 1 cut(s) 119
Bpu14I TTCGAA 1 cut(s) 1064
BpuEI CTTGAG 1 cut(s) 1072
BsaHI GRCGYC 4 cut(s) 580, 649, 1002, 1077
BsaI GGTCTC 1 cut(s) 875
BsaJI CCNNGG 9 cut(s) 55, 130, 241, 254, 533, 655, 673, 758, 889
BsaWI WCCGGW 2 cut(s) 36, 65
BsaXI ACNNNNNCTCC 6 cut(s) 96, 126, 219, 249, 636, 666
Bse118I RCCGGY 2 cut(s) 609, 731
Bse1I ACTGG 2 cut(s) 518, 1012
BseAI TCCGGA 1 cut(s) 36
BseBI CCWGG 3 cut(s) 131, 256, 298
BseDI CCNNGG 9 cut(s) 55, 130, 241, 254, 533, 655, 673, 758, 889
BseGI GGATG 3 cut(s) 343, 750, 778
BseMII CTCAG 4 cut(s) 110, 426, 484, 1029
BseNI ACTGG 2 cut(s) 518, 1012
BsePI GCGCGC 4 cut(s) 330, 589, 618, 620
BseSI GKGCMC 2 cut(s) 978, 1027
BseX3I CGGCCG 2 cut(s) 230, 314
BseXI GCAGC 3 cut(s) 359, 611, 905
BseYI CCCAGC 1 cut(s) 1092
BsgI GTGCAG 1 cut(s) 206
Bsh1285I CGRYCG 9 cut(s) 12, 233, 271, 317, 489, 638, 724, 743, 758
BshNI GGYRCC 2 cut(s) 1001, 1076
BsiEI CGRYCG 9 cut(s) 12, 233, 271, 317, 489, 638, 724, 743, 758
BsiHKAI GWGCWC 2 cut(s) 91, 570
BsiHKCI CYCGRG 3 cut(s) 241, 673, 714
BslFI GGGAC 1 cut(s) 423
BsmAI GTCTC 2 cut(s) 656, 875
BsmBI CGTCTC 1 cut(s) 656
BsmFI GGGAC 1 cut(s) 423
BsmI GAATGC 1 cut(s) 921
Bso31I GGTCTC 1 cut(s) 875
BsoBI CYCGRG 3 cut(s) 241, 673, 714
Bsp119I TTCGAA 1 cut(s) 1064
Bsp120I GGGCCC 1 cut(s) 1023
Bsp1286I GDGCHC 6 cut(s) 91, 248, 570, 978, 988, 1027
Bsp13I TCCGGA 1 cut(s) 36
Bsp143I GATC 5 cut(s) 217, 476, 510, 635, 721
Bsp1720I GCTNAGC 1 cut(s) 119
BspCNI CTCAG 4 cut(s) 111, 425, 483, 1030
BspEI TCCGGA 1 cut(s) 36
BspPI GGATC 2 cut(s) 505, 518
BspQI GCTCTTC 1 cut(s) 96
BspT104I TTCGAA 1 cut(s) 1064
BspT107I GGYRCC 2 cut(s) 1001, 1076
BspTNI GGTCTC 1 cut(s) 875
BsrBI CCGCTC 2 cut(s) 235, 411
BsrFI RCCGGY 2 cut(s) 609, 731
BsrI ACTGG 2 cut(s) 518, 1012
BssAI RCCGGY 2 cut(s) 609, 731
BssECI CCNNGG 9 cut(s) 55, 130, 241, 254, 533, 655, 673, 758, 889
BssHII GCGCGC 4 cut(s) 330, 589, 618, 620
BssMI GATC 5 cut(s) 217, 476, 510, 635, 721
BssNI GRCGYC 4 cut(s) 580, 649, 1002, 1077
BssSI CACGAG 2 cut(s) 503, 954
BssT1I CCWWGG 2 cut(s) 533, 889
Bst2BI CACGAG 2 cut(s) 503, 954
Bst2UI CCWGG 3 cut(s) 131, 256, 298
Bst4CI ACNGT 2 cut(s) 24, 744
Bst6I CTCTTC 2 cut(s) 96, 176
BstACI GRCGYC 4 cut(s) 580, 649, 1002, 1077
BstBI TTCGAA 1 cut(s) 1064
BstDEI CTNAG 4 cut(s) 119, 412, 470, 1038
BstDSI CCRYGG 1 cut(s) 655
BstF5I GGATG 3 cut(s) 343, 750, 778
BstH2I RGCGCY 5 cut(s) 304, 343, 953, 1005, 1080
BstKTI GATC 5 cut(s) 220, 479, 513, 638, 724
BstMAI GTCTC 2 cut(s) 656, 875
BstMBI GATC 5 cut(s) 217, 476, 510, 635, 721
BstMCI CGRYCG 9 cut(s) 12, 233, 271, 317, 489, 638, 724, 743, 758
BstNI CCWGG 3 cut(s) 131, 256, 298
BstNSI RCATGY 1 cut(s) 452
BstSLI GKGCMC 2 cut(s) 978, 1027
BstV1I GCAGC 3 cut(s) 359, 611, 905
BstX2I RGATCY 2 cut(s) 217, 510
BstYI RGATCY 2 cut(s) 217, 510
BstZI CGGCCG 2 cut(s) 230, 314
BtgI CCRYGG 1 cut(s) 655
BtgZI GCGATG 1 cut(s) 751
BtrI CACGTC 1 cut(s) 81
BtsCI GGATG 3 cut(s) 343, 750, 778
BtsIMutI CAGTG 1 cut(s) 1019
CaiI CAGNNNCTG 1 cut(s) 101
Cfr10I RCCGGY 2 cut(s) 609, 731
Cfr42I CCGCGG 1 cut(s) 658
Cfr9I CCCGGG 2 cut(s) 241, 673
CpoI CGGWCCG 2 cut(s) 729, 1029
CseI GACGC 5 cut(s) 588, 629, 638, 689, 1052
Csp6I GTAC 4 cut(s) 6, 25, 613, 853
CspCI CAANNNNNGTGG 2 cut(s) 486, 521
CspI CGGWCCG 2 cut(s) 729, 1029
CviAII CATG 2 cut(s) 155, 449
CviQI GTAC 4 cut(s) 6, 25, 613, 853
DdeI CTNAG 4 cut(s) 119, 412, 470, 1038
DinI GGCGCC 2 cut(s) 1003, 1078
DpnI GATC 5 cut(s) 219, 478, 512, 637, 723
DpnII GATC 5 cut(s) 217, 476, 510, 635, 721
DrdI GACNNNNNNGTC 1 cut(s) 535
DseDI GACNNNNNNGTC 1 cut(s) 535
EaeI YGGCCR 4 cut(s) 230, 314, 574, 682
EagI CGGCCG 2 cut(s) 230, 314
Eam1104I CTCTTC 2 cut(s) 96, 176
EarI CTCTTC 2 cut(s) 96, 176
EciI GGCGGA 3 cut(s) 227, 742, 1021
Ecl136II GAGCTC 1 cut(s) 568
EclXI CGGCCG 2 cut(s) 230, 314
Eco130I CCWWGG 2 cut(s) 533, 889
Eco24I GRGCYC 4 cut(s) 248, 570, 988, 1027
Eco31I GGTCTC 1 cut(s) 875
Eco47I GGWCC 8 cut(s) 31, 104, 437, 537, 705, 729, 969, 1029
Eco52I CGGCCG 2 cut(s) 230, 314
Eco53kI GAGCTC 1 cut(s) 568
Eco57I CTGAAG 1 cut(s) 320
Eco88I CYCGRG 3 cut(s) 241, 673, 714
EcoICRI GAGCTC 1 cut(s) 568
EcoO109I RGGNCCY 2 cut(s) 294, 437
EcoRII CCWGG 3 cut(s) 129, 254, 296
EcoT14I CCWWGG 2 cut(s) 533, 889
EcoT38I GRGCYC 4 cut(s) 248, 570, 988, 1027
EgeI GGCGCC 2 cut(s) 1003, 1078
EheI GGCGCC 2 cut(s) 1003, 1078
ErhI CCWWGG 2 cut(s) 533, 889
Esp3I CGTCTC 1 cut(s) 656
FaeI CATG 2 cut(s) 158, 452
FaiI YATR 4 cut(s) 156, 419, 450, 663
FaqI GGGAC 1 cut(s) 423
FatI CATG 2 cut(s) 154, 448
FauI CCCGC 4 cut(s) 368, 416, 522, 650
FblI GTMKAC 1 cut(s) 643
FokI GGATG 3 cut(s) 330, 737, 765
FriOI GRGCYC 4 cut(s) 248, 570, 988, 1027
FspBI CTAG 2 cut(s) 359, 1122
GsaI CCCAGC 1 cut(s) 1096
GsuI CTGGAG 1 cut(s) 1035
HaeII RGCGCY 5 cut(s) 304, 343, 953, 1005, 1080
HgaI GACGC 5 cut(s) 588, 629, 638, 689, 1052
Hin1I GRCGYC 4 cut(s) 580, 649, 1002, 1077
Hin1II CATG 2 cut(s) 158, 452
HincII GTYRAC 1 cut(s) 644
HindII GTYRAC 1 cut(s) 644
HinfI GANTC 6 cut(s) 365, 529, 815, 938, 1083, 1128
HphI GGTGA 2 cut(s) 416, 982
Hpy166II GTNNAC 5 cut(s) 152, 424, 644, 708, 1017
Hpy188I TCNGA 3 cut(s) 473, 528, 755
Hpy188III TCNNGA 5 cut(s) 37, 440, 548, 792, 1052
Hpy8I GTNNAC 5 cut(s) 152, 424, 644, 708, 1017
Hpy99I CGWCG 9 cut(s) 82, 231, 315, 582, 645, 648, 705, 983, 1076
HpyAV CCTTC 3 cut(s) 188, 476, 1018
HpyCH4III ACNGT 2 cut(s) 24, 744
HpyCH4IV ACGT 1 cut(s) 80
HpyCH4V TGCA 4 cut(s) 141, 223, 497, 921
HpyF3I CTNAG 4 cut(s) 119, 412, 470, 1038
HpySE526I ACGT 1 cut(s) 80
Hsp92I GRCGYC 4 cut(s) 580, 649, 1002, 1077
Hsp92II CATG 2 cut(s) 158, 452
KasI GGCGCC 2 cut(s) 1001, 1076
KflI GGGWCCC 1 cut(s) 437
Kpn2I TCCGGA 1 cut(s) 36
KspI CCGCGG 1 cut(s) 658
Kzo9I GATC 5 cut(s) 217, 476, 510, 635, 721
LguI GCTCTTC 1 cut(s) 96
LmnI GCTCC 3 cut(s) 240, 565, 586
Lsp1109I GCAGC 3 cut(s) 359, 611, 905
LweI GCATC 1 cut(s) 774
MaeI CTAG 2 cut(s) 359, 1122
MaeII ACGT 1 cut(s) 80
MaeIII GTNAC 1 cut(s) 1117
MalI GATC 5 cut(s) 219, 478, 512, 637, 723
MbiI CCGCTC 2 cut(s) 235, 411
MboI GATC 5 cut(s) 217, 476, 510, 635, 721
MboII GAAGA 3 cut(s) 83, 163, 486
MflI RGATCY 2 cut(s) 217, 510
MhlI GDGCHC 6 cut(s) 91, 248, 570, 978, 988, 1027
MluCI AATT 3 cut(s) 797, 898, 1060
Mly113I GGCGCC 2 cut(s) 1002, 1077
MlyI GAGTC 3 cut(s) 523, 809, 932
MmeI TCCRAC 1 cut(s) 778
MroI TCCGGA 1 cut(s) 36
MspA1I CMGCKG 3 cut(s) 101, 657, 1037
Mva1269I GAATGC 1 cut(s) 921
MvaI CCWGG 3 cut(s) 131, 256, 298
NarI GGCGCC 2 cut(s) 1002, 1077
NdeII GATC 5 cut(s) 217, 476, 510, 635, 721
NlaIII CATG 2 cut(s) 158, 452
NspI RCATGY 1 cut(s) 452
NspV TTCGAA 1 cut(s) 1064
PaeI GCATGC 1 cut(s) 452
PauI GCGCGC 4 cut(s) 330, 589, 618, 620
PciSI GCTCTTC 1 cut(s) 96
PcsI WCGNNNNNNNCGW 1 cut(s) 640
PctI GAATGC 1 cut(s) 921
PfeI GAWTC 3 cut(s) 365, 1083, 1128
PflFI GACNNNGTC 2 cut(s) 648, 967
PflMI CCANNNNNTGG 1 cut(s) 101
Ple19I CGATCG 2 cut(s) 638, 724
PleI GAGTC 3 cut(s) 523, 809, 932
PluTI GGCGCC 2 cut(s) 1005, 1080
PpsI GAGTC 3 cut(s) 523, 809, 932
PpuMI RGGWCCY 1 cut(s) 437
Psp124BI GAGCTC 1 cut(s) 570
Psp5II RGGWCCY 1 cut(s) 437
Psp6I CCWGG 3 cut(s) 129, 254, 296
PspFI CCCAGC 1 cut(s) 1092
PspGI CCWGG 3 cut(s) 129, 254, 296
PspOMI GGGCCC 1 cut(s) 1023
PspPPI RGGWCCY 1 cut(s) 437
PstNI CAGNNNCTG 1 cut(s) 101
PsuI RGATCY 2 cut(s) 217, 510
PsyI GACNNNGTC 2 cut(s) 648, 967
PteI GCGCGC 4 cut(s) 330, 589, 618, 620
PvuI CGATCG 2 cut(s) 638, 724
RsaI GTAC 4 cut(s) 7, 26, 614, 854
RsaNI GTAC 4 cut(s) 6, 25, 613, 853
Rsr2I CGGWCCG 2 cut(s) 729, 1029
RsrII CGGWCCG 2 cut(s) 729, 1029
SacI GAGCTC 1 cut(s) 570
SacII CCGCGG 1 cut(s) 658
SalI GTCGAC 1 cut(s) 642
SapI GCTCTTC 1 cut(s) 96
Sau3AI GATC 5 cut(s) 217, 476, 510, 635, 721
SchI GAGTC 3 cut(s) 523, 809, 932
SduI GDGCHC 6 cut(s) 91, 248, 570, 978, 988, 1027
SetI ASST 9 cut(s) 83, 114, 164, 260, 328, 485, 570, 1010, 1094
SfaNI GCATC 1 cut(s) 774
SfoI GGCGCC 2 cut(s) 1003, 1078
Sfr303I CCGCGG 1 cut(s) 658
SfuI TTCGAA 1 cut(s) 1064
SgrBI CCGCGG 1 cut(s) 658
SgrDI CGTCGACG 1 cut(s) 642
SinI GGWCC 8 cut(s) 31, 104, 437, 537, 705, 729, 969, 1029
SmaI CCCGGG 2 cut(s) 243, 675
SmlI CTYRAG 1 cut(s) 1087
SmoI CTYRAG 1 cut(s) 1087
SphI GCATGC 1 cut(s) 452
SrfI GCCCGGGC 2 cut(s) 243, 675
Sse9I AATT 3 cut(s) 797, 898, 1060
SspDI GGCGCC 2 cut(s) 1001, 1076
SspI AATATT 1 cut(s) 199
SspMI CTAG 2 cut(s) 359, 1122
SstI GAGCTC 1 cut(s) 570
StyI CCWWGG 2 cut(s) 533, 889
TaaI ACNGT 2 cut(s) 24, 744
TaiI ACGT 1 cut(s) 83
TaqI TCGA 4 cut(s) 460, 643, 739, 1064
TaqII GACCGA 4 cut(s) 19, 475, 693, 857
TasI AATT 3 cut(s) 797, 898, 1060
TauI GCSGC 9 cut(s) 54, 101, 235, 267, 276, 687, 690, 693, 1037
TfiI GAWTC 3 cut(s) 365, 1083, 1128
TscAI CASTG 1 cut(s) 1019
TseI GCWGC 3 cut(s) 372, 624, 918
TspDTI ATGAA 1 cut(s) 826
TspGWI ACGGA 1 cut(s) 529
TspMI CCCGGG 2 cut(s) 241, 673
TspRI CASTG 1 cut(s) 1019
Tth111I GACNNNGTC 2 cut(s) 648, 967
Van91I CCANNNNNTGG 1 cut(s) 101
VpaK11BI GGWCC 8 cut(s) 31, 104, 437, 537, 705, 729, 969, 1029
XapI RAATTY 1 cut(s) 898
XceI RCATGY 1 cut(s) 452
XmaI CCCGGG 2 cut(s) 241, 673
XmiI GTMKAC 1 cut(s) 643
XspI CTAG 2 cut(s) 359, 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.