Rroxscaffold_54G00443550

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000054
OG0000037
Physical Location & Seq
Reverse (-)
76425 .. 77612
1188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_54G00443550.1

Sequence Viewer

Length: 612 bp
ATGGGGAGCCCGCAGGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGACCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCTGAGGACGCTTCTCCAGACTACAATTCGGACGCCTTACGACGCCAGATTCTCAAGCTGGGCTATTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGGACGGCGGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCTGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

203

Amino Acids

22.12

Weight (kDa)

11.56

Isoelectric Point (pI)

50.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 93
AccB1I GGYRCC 1 cut(s) 277
AccI GTMKAC 2 cut(s) 84, 161
AccII CGCG 1 cut(s) 81
AciI CCGC 8 cut(s) 11, 126, 129, 132, 181, 308, 469, 494
AcoI YGGCCR 1 cut(s) 123
AcsI RAATTY 1 cut(s) 174
AcyI GRCGYC 4 cut(s) 90, 278, 344, 354
AfaI GTAC 1 cut(s) 549
AfiI CCNNNNNNNGG 7 cut(s) 24, 121, 190, 288, 289, 290, 486
AgsI TTSAA 2 cut(s) 452, 515
AjnI CCWGG 3 cut(s) 23, 287, 552
AleI CACNNNNGTG 1 cut(s) 538
AluBI AGCT 1 cut(s) 369
AluI AGCT 1 cut(s) 369
Alw21I GWGCWC 1 cut(s) 32
Alw26I GTCTC 3 cut(s) 47, 97, 487
Ama87I CYCGRG 2 cut(s) 114, 155
AoxI GGCC 2 cut(s) 15, 123
ApeKI GCWGC 2 cut(s) 65, 194
ApoI RAATTY 1 cut(s) 174
AspLEI GCGC 5 cut(s) 61, 228, 280, 528, 573
AspS9I GGNCC 3 cut(s) 146, 245, 305
AsuC2I CCSGG 6 cut(s) 115, 116, 249, 303, 381, 487
AsuHPI GGTGA 2 cut(s) 258, 469
AvaI CYCGRG 2 cut(s) 114, 155
AvaII GGWCC 3 cut(s) 146, 245, 305
BaeGI GKGCMC 1 cut(s) 254
BanI GGYRCC 1 cut(s) 277
BanII GRGCYC 2 cut(s) 11, 264
BauI CACGAG 1 cut(s) 230
BbsI GAAGAC 1 cut(s) 459
Bbv12I GWGCWC 1 cut(s) 32
BbvI GCAGC 2 cut(s) 52, 181
BceAI ACGGC 4 cut(s) 2, 72, 377, 507
BciT130I CCWGG 3 cut(s) 25, 289, 554
BcnI CCSGG 6 cut(s) 115, 116, 249, 303, 381, 487
BcoDI GTCTC 3 cut(s) 47, 97, 487
BfaI CTAG 1 cut(s) 610
BfoI RGCGCY 2 cut(s) 229, 281
BglI GCCNNNNNGGC 1 cut(s) 56
BisI GCNGC 5 cut(s) 66, 126, 129, 132, 195
BlsI GCNGC 5 cut(s) 67, 127, 130, 133, 196
Bme1390I CCNGG 9 cut(s) 25, 115, 116, 249, 289, 303, 381, 487, 554
Bme18I GGWCC 3 cut(s) 146, 245, 305
BmeT110I CYCGRG 2 cut(s) 114, 155
BmgT120I GGNCC 3 cut(s) 146, 245, 305
BmiI GGNNCC 3 cut(s) 8, 246, 279
BmrFI CCNGG 9 cut(s) 25, 115, 116, 249, 289, 303, 381, 487, 554
BmsI GCATC 1 cut(s) 27
BpiI GAAGAC 1 cut(s) 459
BpmI CTGGAG 1 cut(s) 311
Bpu10I CCTNAGC 1 cut(s) 410
BpuEI CTTGAG 1 cut(s) 349
BpuMI CCSGG 6 cut(s) 115, 116, 249, 303, 381, 487
BsaHI GRCGYC 4 cut(s) 90, 278, 344, 354
BsaJI CCNNGG 6 cut(s) 96, 114, 165, 288, 521, 553
BsaXI ACNNNNNCTCC 2 cut(s) 77, 107
Bsc4I CCNNNNNNNGG 7 cut(s) 24, 121, 190, 288, 289, 290, 486
Bse118I RCCGGY 1 cut(s) 537
BseBI CCWGG 3 cut(s) 25, 289, 554
BseDI CCNNGG 6 cut(s) 96, 114, 165, 288, 521, 553
BseLI CCNNNNNNNGG 7 cut(s) 24, 121, 190, 288, 289, 290, 486
BseMII CTCAG 1 cut(s) 305
BseSI GKGCMC 1 cut(s) 254
BseXI GCAGC 2 cut(s) 52, 181
BseYI CCCAGC 1 cut(s) 369
Bsh1236I CGCG 1 cut(s) 81
BshFI GGCC 2 cut(s) 17, 125
BshNI GGYRCC 1 cut(s) 277
BsiHKAI GWGCWC 1 cut(s) 32
BsiHKCI CYCGRG 2 cut(s) 114, 155
BsiSI CCGG 6 cut(s) 115, 248, 303, 381, 486, 538
BslFI GGGAC 2 cut(s) 306, 502
BslI CCNNNNNNNGG 7 cut(s) 24, 121, 190, 288, 289, 290, 486
BsmAI GTCTC 3 cut(s) 47, 97, 487
BsmBI CGTCTC 3 cut(s) 47, 97, 487
BsmFI GGGAC 2 cut(s) 306, 502
BsmI GAATGC 1 cut(s) 197
BsnI GGCC 2 cut(s) 17, 125
BsoBI CYCGRG 2 cut(s) 114, 155
Bsp1286I GDGCHC 4 cut(s) 11, 32, 254, 264
Bsp143I GATC 3 cut(s) 76, 474, 564
BspACI CCGC 8 cut(s) 11, 126, 129, 132, 181, 308, 469, 494
BspANI GGCC 2 cut(s) 17, 125
BspCNI CTCAG 1 cut(s) 306
BspFNI CGCG 1 cut(s) 81
BspLI GGNNCC 3 cut(s) 8, 246, 279
BspT107I GGYRCC 1 cut(s) 277
BsrFI RCCGGY 1 cut(s) 537
BssAI RCCGGY 1 cut(s) 537
BssECI CCNNGG 6 cut(s) 96, 114, 165, 288, 521, 553
BssMI GATC 3 cut(s) 76, 474, 564
BssNI GRCGYC 4 cut(s) 90, 278, 344, 354
BssSI CACGAG 1 cut(s) 230
BssT1I CCWWGG 2 cut(s) 165, 521
Bst2BI CACGAG 1 cut(s) 230
Bst2UI CCWGG 3 cut(s) 25, 289, 554
Bst4CI ACNGT 2 cut(s) 146, 481
BstACI GRCGYC 4 cut(s) 90, 278, 344, 354
BstC8I GCNNGC 7 cut(s) 11, 15, 32, 48, 63, 390, 575
BstDEI CTNAG 3 cut(s) 314, 399, 410
BstDSI CCRYGG 1 cut(s) 96
BstFNI CGCG 1 cut(s) 81
BstH2I RGCGCY 2 cut(s) 229, 281
BstHHI GCGC 5 cut(s) 61, 228, 280, 528, 573
BstKTI GATC 3 cut(s) 79, 477, 567
BstMAI GTCTC 3 cut(s) 47, 97, 487
BstMBI GATC 3 cut(s) 76, 474, 564
BstMWI GCNNNNNNNGC 6 cut(s) 56, 65, 125, 131, 225, 534
BstNI CCWGG 3 cut(s) 25, 289, 554
BstNSI RCATGY 1 cut(s) 65
BstSCI CCNGG 9 cut(s) 23, 113, 114, 247, 287, 301, 379, 485, 552
BstSLI GKGCMC 1 cut(s) 254
BstUI CGCG 1 cut(s) 81
BstV1I GCAGC 2 cut(s) 52, 181
BstV2I GAAGAC 1 cut(s) 459
BsuRI GGCC 2 cut(s) 17, 125
BtgI CCRYGG 1 cut(s) 96
Cac8I GCNNGC 7 cut(s) 11, 15, 32, 48, 63, 390, 575
CfoI GCGC 5 cut(s) 61, 228, 280, 528, 573
Cfr10I RCCGGY 1 cut(s) 537
Cfr13I GGNCC 3 cut(s) 146, 245, 305
Cfr9I CCCGGG 1 cut(s) 114
CpoI CGGWCCG 1 cut(s) 305
CseI GACGC 4 cut(s) 70, 328, 352, 362
Csp6I GTAC 1 cut(s) 548
CspI CGGWCCG 1 cut(s) 305
CviAII CATG 2 cut(s) 62, 74
CviQI GTAC 1 cut(s) 548
DdeI CTNAG 3 cut(s) 314, 399, 410
DinI GGCGCC 1 cut(s) 279
DpnI GATC 3 cut(s) 78, 476, 566
DpnII GATC 3 cut(s) 76, 474, 564
EaeI YGGCCR 1 cut(s) 123
EciI GGCGGA 1 cut(s) 297
Eco130I CCWWGG 2 cut(s) 165, 521
Eco24I GRGCYC 2 cut(s) 11, 264
Eco32I GATATC 1 cut(s) 421
Eco47I GGWCC 3 cut(s) 146, 245, 305
Eco88I CYCGRG 2 cut(s) 114, 155
EcoRII CCWGG 3 cut(s) 23, 287, 552
EcoRV GATATC 1 cut(s) 421
EcoT14I CCWWGG 2 cut(s) 165, 521
EcoT38I GRGCYC 2 cut(s) 11, 264
EgeI GGCGCC 1 cut(s) 279
EheI GGCGCC 1 cut(s) 279
ErhI CCWWGG 2 cut(s) 165, 521
Esp3I CGTCTC 3 cut(s) 47, 97, 487
FaeI CATG 2 cut(s) 65, 77
FaiI YATR 5 cut(s) 63, 75, 104, 275, 447
FaqI GGGAC 2 cut(s) 306, 502
FatI CATG 2 cut(s) 61, 73
FauI CCCGC 3 cut(s) 18, 476, 487
FblI GTMKAC 2 cut(s) 84, 161
Fnu4HI GCNGC 5 cut(s) 66, 126, 129, 132, 195
FriOI GRGCYC 2 cut(s) 11, 264
Fsp4HI GCNGC 5 cut(s) 66, 126, 129, 132, 195
FspBI CTAG 1 cut(s) 610
GlaI GCGC 5 cut(s) 60, 227, 279, 527, 572
GluI GCNGC 5 cut(s) 66, 126, 129, 132, 195
GsaI CCCAGC 1 cut(s) 373
GsuI CTGGAG 1 cut(s) 311
HaeII RGCGCY 2 cut(s) 229, 281
HaeIII GGCC 2 cut(s) 17, 125
HapII CCGG 6 cut(s) 115, 248, 303, 381, 486, 538
HgaI GACGC 4 cut(s) 70, 328, 352, 362
HhaI GCGC 5 cut(s) 61, 228, 280, 528, 573
Hin1I GRCGYC 4 cut(s) 90, 278, 344, 354
Hin1II CATG 2 cut(s) 65, 77
Hin6I GCGC 5 cut(s) 59, 226, 278, 526, 571
HinP1I GCGC 5 cut(s) 59, 226, 278, 526, 571
HincII GTYRAC 2 cut(s) 85, 162
HindII GTYRAC 2 cut(s) 85, 162
HinfI GANTC 5 cut(s) 158, 214, 360, 405, 434
HpaII CCGG 6 cut(s) 115, 248, 303, 381, 486, 538
HphI GGTGA 2 cut(s) 258, 469
Hpy166II GTNNAC 3 cut(s) 85, 149, 162
Hpy188I TCNGA 2 cut(s) 315, 342
Hpy188III TCNNGA 1 cut(s) 328
Hpy8I GTNNAC 3 cut(s) 85, 149, 162
Hpy99I CGWCG 5 cut(s) 86, 89, 92, 356, 461
HpyAV CCTTC 1 cut(s) 294
HpyCH4III ACNGT 2 cut(s) 146, 481
HpyCH4IV ACGT 1 cut(s) 90
HpyCH4V TGCA 2 cut(s) 197, 587
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 65, 125, 131, 225, 534
HpyF3I CTNAG 3 cut(s) 314, 399, 410
HpySE526I ACGT 1 cut(s) 90
Hsp92I GRCGYC 4 cut(s) 90, 278, 344, 354
Hsp92II CATG 2 cut(s) 65, 77
HspAI GCGC 5 cut(s) 59, 226, 278, 526, 571
KasI GGCGCC 1 cut(s) 277
Kzo9I GATC 3 cut(s) 76, 474, 564
LmnI GCTCC 2 cut(s) 6, 27
Lsp1109I GCAGC 2 cut(s) 52, 181
LweI GCATC 1 cut(s) 27
MaeI CTAG 1 cut(s) 610
MaeII ACGT 1 cut(s) 90
MaeIII GTNAC 3 cut(s) 19, 140, 394
MalI GATC 3 cut(s) 78, 476, 566
MboI GATC 3 cut(s) 76, 474, 564
MboII GAAGA 1 cut(s) 464
MhlI GDGCHC 4 cut(s) 11, 32, 254, 264
MluCI AATT 3 cut(s) 174, 336, 529
Mly113I GGCGCC 1 cut(s) 278
MlyI GAGTC 3 cut(s) 167, 208, 443
MnlI CCTC 5 cut(s) 239, 280, 309, 321, 551
MslI CAYNNNNRTG 3 cut(s) 35, 538, 582
MspI CCGG 6 cut(s) 115, 248, 303, 381, 486, 538
MspR9I CCNGG 9 cut(s) 25, 115, 116, 249, 289, 303, 381, 487, 554
Mva1269I GAATGC 1 cut(s) 197
MvaI CCWGG 3 cut(s) 25, 289, 554
MvnI CGCG 1 cut(s) 81
MwoI GCNNNNNNNGC 6 cut(s) 56, 65, 125, 131, 225, 534
NarI GGCGCC 1 cut(s) 278
NciI CCSGG 6 cut(s) 115, 116, 249, 303, 381, 487
NdeII GATC 3 cut(s) 76, 474, 564
NlaIII CATG 2 cut(s) 65, 77
NlaIV GGNNCC 3 cut(s) 8, 246, 279
NmeAIII GCCGAG 3 cut(s) 76, 440, 455
NspI RCATGY 1 cut(s) 65
OliI CACNNNNGTG 1 cut(s) 538
PaeI GCATGC 1 cut(s) 65
PcsI WCGNNNNNNNCGW 1 cut(s) 38
PctI GAATGC 1 cut(s) 197
PfeI GAWTC 2 cut(s) 360, 405
PflFI GACNNNGTC 2 cut(s) 89, 243
PfoI TCCNGGA 1 cut(s) 485
PkrI GCNGC 5 cut(s) 67, 127, 130, 133, 196
PleI GAGTC 3 cut(s) 166, 208, 442
PluTI GGCGCC 1 cut(s) 281
PpsI GAGTC 3 cut(s) 166, 208, 442
Psp6I CCWGG 3 cut(s) 23, 287, 552
PspFI CCCAGC 1 cut(s) 369
PspGI CCWGG 3 cut(s) 23, 287, 552
PspN4I GGNNCC 3 cut(s) 8, 246, 279
PspPI GGNCC 3 cut(s) 146, 245, 305
PsyI GACNNNGTC 2 cut(s) 89, 243
RsaI GTAC 1 cut(s) 549
RsaNI GTAC 1 cut(s) 548
RseI CAYNNNNRTG 3 cut(s) 35, 538, 582
Rsr2I CGGWCCG 1 cut(s) 305
RsrII CGGWCCG 1 cut(s) 305
SalI GTCGAC 2 cut(s) 83, 160
SatI GCNGC 5 cut(s) 66, 126, 129, 132, 195
Sau3AI GATC 3 cut(s) 76, 474, 564
Sau96I GGNCC 3 cut(s) 146, 245, 305
SchI GAGTC 3 cut(s) 167, 208, 443
ScrFI CCNGG 9 cut(s) 25, 115, 116, 249, 289, 303, 381, 487, 554
SduI GDGCHC 4 cut(s) 11, 32, 254, 264
SetI ASST 3 cut(s) 93, 167, 371
SfaNI GCATC 1 cut(s) 27
SfoI GGCGCC 1 cut(s) 279
SgrAI CRCCGGYG 1 cut(s) 537
SgrDI CGTCGACG 1 cut(s) 83
SinI GGWCC 3 cut(s) 146, 245, 305
SmaI CCCGGG 1 cut(s) 116
SmiMI CAYNNNNRTG 3 cut(s) 35, 538, 582
SmlI CTYRAG 1 cut(s) 364
SmoI CTYRAG 1 cut(s) 364
SphI GCATGC 1 cut(s) 65
SrfI GCCCGGGC 1 cut(s) 116
Sse9I AATT 3 cut(s) 174, 336, 529
SsiI CCGC 8 cut(s) 11, 126, 129, 132, 181, 308, 469, 494
SspDI GGCGCC 1 cut(s) 277
SspMI CTAG 1 cut(s) 610
StyD4I CCNGG 9 cut(s) 23, 113, 114, 247, 287, 301, 379, 485, 552
StyI CCWWGG 2 cut(s) 165, 521
TaaI ACNGT 2 cut(s) 146, 481
TaiI ACGT 1 cut(s) 93
TaqI TCGA 3 cut(s) 84, 161, 563
TasI AATT 3 cut(s) 174, 336, 529
TauI GCSGC 3 cut(s) 128, 131, 134
TfiI GAWTC 2 cut(s) 360, 405
TseI GCWGC 2 cut(s) 65, 194
TspDTI ATGAA 1 cut(s) 499
TspGWI ACGGA 3 cut(s) 128, 186, 413
TspMI CCCGGG 1 cut(s) 114
Tth111I GACNNNGTC 2 cut(s) 89, 243
VpaK11BI GGWCC 3 cut(s) 146, 245, 305
XapI RAATTY 1 cut(s) 174
XceI RCATGY 1 cut(s) 65
XmaI CCCGGG 1 cut(s) 114
XmiI GTMKAC 2 cut(s) 84, 161
XspI CTAG 1 cut(s) 610
ZraI GACGTC 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.