Rroxscaffold_19G00448900

Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000019
OG0000037
Physical Location & Seq
Forward (+)
13309 .. 14689
1381 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_19G00448900.1

Sequence Viewer

Length: 723 bp
ATGCTCACACTCGAACCCTTCTCGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAATGGGGAGCCCGCAGGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCGAGGACGCTTCTCCGGACTACAATTCGGACGCCTTACGACGCCGATTCTCAAGCTGGGCTATTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGACGGCGGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCCGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCCGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

240

Amino Acids

27.35

Weight (kDa)

11.85

Isoelectric Point (pI)

71.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
AatII GACGTC 1 cut(s) 248
AbsI CCTCGAGG 1 cut(s) 380
AccB1I GGYRCC 1 cut(s) 345
AccI GTMKAC 2 cut(s) 123, 239
AccII CGCG 1 cut(s) 236
AccIII TCCGGA 2 cut(s) 394, 551
AclWI GGATC 2 cut(s) 55, 68
AcoI YGGCCR 1 cut(s) 277
AcyI GRCGYC 4 cut(s) 245, 346, 411, 421
AfaI GTAC 1 cut(s) 614
AflIII ACRYGT 1 cut(s) 118
AgsI TTSAA 3 cut(s) 144, 518, 580
AjnI CCWGG 2 cut(s) 178, 355
AleI CACNNNNGTG 1 cut(s) 603
AluBI AGCT 2 cut(s) 75, 435
AluI AGCT 2 cut(s) 75, 435
Alw21I GWGCWC 2 cut(s) 50, 187
Alw26I GTCTC 3 cut(s) 202, 252, 553
Alw44I GTGCAC 1 cut(s) 46
AlwI GGATC 2 cut(s) 55, 68
Ama87I CYCGRG 2 cut(s) 380, 618
Aor13HI TCCGGA 2 cut(s) 394, 551
AoxI GGCC 3 cut(s) 150, 170, 277
ApaLI GTGCAC 1 cut(s) 46
ApeKI GCWGC 1 cut(s) 220
AspA2I CCTAGG 1 cut(s) 674
AspLEI GCGC 6 cut(s) 85, 216, 348, 593, 638, 690
AspS9I GGNCC 4 cut(s) 133, 150, 313, 373
AsuC2I CCSGG 7 cut(s) 270, 317, 371, 447, 619, 620, 715
AsuHPI GGTGA 3 cut(s) 92, 326, 535
AvaI CYCGRG 2 cut(s) 380, 618
AvaII GGWCC 3 cut(s) 133, 313, 373
AvrII CCTAGG 1 cut(s) 674
BaeGI GKGCMC 2 cut(s) 50, 322
BamHI GGATCC 1 cut(s) 60
BanI GGYRCC 1 cut(s) 345
BanII GRGCYC 2 cut(s) 166, 332
BauI CACGAG 1 cut(s) 298
BbsI GAAGAC 1 cut(s) 525
Bbv12I GWGCWC 2 cut(s) 50, 187
BbvI GCAGC 1 cut(s) 207
BceAI ACGGC 4 cut(s) 157, 227, 443, 572
BcgI CGANNNNNNTGC 2 cut(s) 103, 137
BciT130I CCWGG 2 cut(s) 180, 357
BcnI CCSGG 7 cut(s) 270, 317, 371, 447, 619, 620, 715
BcoDI GTCTC 3 cut(s) 202, 252, 553
BfaI CTAG 1 cut(s) 675
BfoI RGCGCY 1 cut(s) 349
BglI GCCNNNNNGGC 1 cut(s) 211
BisI GCNGC 5 cut(s) 221, 280, 283, 286, 696
BlnI CCTAGG 1 cut(s) 674
BlsI GCNGC 5 cut(s) 222, 281, 284, 287, 697
Bme1390I CCNGG 9 cut(s) 180, 270, 317, 357, 371, 447, 619, 620, 715
Bme18I GGWCC 3 cut(s) 133, 313, 373
BmeT110I CYCGRG 2 cut(s) 380, 618
BmgT120I GGNCC 4 cut(s) 133, 150, 313, 373
BmiI GGNNCC 4 cut(s) 62, 163, 314, 347
BmrFI CCNGG 9 cut(s) 180, 270, 317, 357, 371, 447, 619, 620, 715
BmsI GCATC 1 cut(s) 182
BpiI GAAGAC 1 cut(s) 525
Bpu10I CCTNAGC 1 cut(s) 476
BpuEI CTTGAG 1 cut(s) 415
BpuMI CCSGG 7 cut(s) 270, 317, 371, 447, 619, 620, 715
BsaHI GRCGYC 4 cut(s) 245, 346, 411, 421
BsaJI CCNNGG 7 cut(s) 129, 251, 356, 586, 618, 674, 713
BsaWI WCCGGW 2 cut(s) 394, 551
BsaXI ACNNNNNCTCC 2 cut(s) 232, 262
Bse118I RCCGGY 1 cut(s) 602
BseAI TCCGGA 2 cut(s) 394, 551
BseBI CCWGG 2 cut(s) 180, 357
BseDI CCNNGG 7 cut(s) 129, 251, 356, 586, 618, 674, 713
BseSI GKGCMC 2 cut(s) 50, 322
BseXI GCAGC 1 cut(s) 207
BseYI CCCAGC 1 cut(s) 435
Bsh1236I CGCG 1 cut(s) 236
Bsh1285I CGRYCG 1 cut(s) 40
BshFI GGCC 3 cut(s) 152, 172, 279
BshNI GGYRCC 1 cut(s) 345
BsiEI CGRYCG 1 cut(s) 40
BsiHKAI GWGCWC 2 cut(s) 50, 187
BsiHKCI CYCGRG 2 cut(s) 380, 618
BsiSI CCGG 9 cut(s) 270, 316, 371, 395, 447, 552, 603, 619, 715
BslFI GGGAC 1 cut(s) 374
BsmAI GTCTC 3 cut(s) 202, 252, 553
BsmBI CGTCTC 3 cut(s) 202, 252, 553
BsmFI GGGAC 1 cut(s) 374
BsnI GGCC 3 cut(s) 152, 172, 279
BsoBI CYCGRG 2 cut(s) 380, 618
Bsp1286I GDGCHC 5 cut(s) 50, 166, 187, 322, 332
Bsp13I TCCGGA 2 cut(s) 394, 551
Bsp143I GATC 5 cut(s) 27, 60, 231, 540, 629
BspANI GGCC 3 cut(s) 152, 172, 279
BspEI TCCGGA 2 cut(s) 394, 551
BspFNI CGCG 1 cut(s) 236
BspLI GGNNCC 4 cut(s) 62, 163, 314, 347
BspPI GGATC 2 cut(s) 55, 68
BspT107I GGYRCC 1 cut(s) 345
BsrFI RCCGGY 1 cut(s) 602
BssAI RCCGGY 1 cut(s) 602
BssECI CCNNGG 7 cut(s) 129, 251, 356, 586, 618, 674, 713
BssMI GATC 5 cut(s) 27, 60, 231, 540, 629
BssNI GRCGYC 4 cut(s) 245, 346, 411, 421
BssSI CACGAG 1 cut(s) 298
BssT1I CCWWGG 3 cut(s) 129, 586, 674
Bst2BI CACGAG 1 cut(s) 298
Bst2UI CCWGG 2 cut(s) 180, 357
Bst4CI ACNGT 1 cut(s) 547
BstACI GRCGYC 4 cut(s) 245, 346, 411, 421
BstC8I GCNNGC 7 cut(s) 166, 170, 187, 203, 218, 456, 640
BstDEI CTNAG 2 cut(s) 465, 476
BstDSI CCRYGG 1 cut(s) 251
BstFNI CGCG 1 cut(s) 236
BstH2I RGCGCY 1 cut(s) 349
BstHHI GCGC 6 cut(s) 85, 216, 348, 593, 638, 690
BstKTI GATC 5 cut(s) 30, 63, 234, 543, 632
BstMAI GTCTC 3 cut(s) 202, 252, 553
BstMBI GATC 5 cut(s) 27, 60, 231, 540, 629
BstMCI CGRYCG 1 cut(s) 40
BstMWI GCNNNNNNNGC 5 cut(s) 211, 220, 279, 285, 599
BstNI CCWGG 2 cut(s) 180, 357
BstNSI RCATGY 2 cut(s) 122, 220
BstSCI CCNGG 9 cut(s) 178, 268, 315, 355, 369, 445, 617, 618, 713
BstSLI GKGCMC 2 cut(s) 50, 322
BstUI CGCG 1 cut(s) 236
BstV1I GCAGC 1 cut(s) 207
BstV2I GAAGAC 1 cut(s) 525
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
BsuRI GGCC 3 cut(s) 152, 172, 279
BtgI CCRYGG 1 cut(s) 251
Cac8I GCNNGC 7 cut(s) 166, 170, 187, 203, 218, 456, 640
CfoI GCGC 6 cut(s) 85, 216, 348, 593, 638, 690
Cfr10I RCCGGY 1 cut(s) 602
Cfr13I GGNCC 4 cut(s) 133, 150, 313, 373
Cfr9I CCCGGG 1 cut(s) 618
CpoI CGGWCCG 1 cut(s) 373
CseI GACGC 4 cut(s) 225, 395, 419, 429
Csp6I GTAC 1 cut(s) 613
CspI CGGWCCG 1 cut(s) 373
CviAII CATG 3 cut(s) 119, 217, 229
CviQI GTAC 1 cut(s) 613
DdeI CTNAG 2 cut(s) 465, 476
DinI GGCGCC 1 cut(s) 347
DpnI GATC 5 cut(s) 29, 62, 233, 542, 631
DpnII GATC 5 cut(s) 27, 60, 231, 540, 629
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 1 cut(s) 277
EciI GGCGGA 2 cut(s) 365, 697
Eco130I CCWWGG 3 cut(s) 129, 586, 674
Eco24I GRGCYC 2 cut(s) 166, 332
Eco32I GATATC 1 cut(s) 487
Eco47I GGWCC 3 cut(s) 133, 313, 373
Eco88I CYCGRG 2 cut(s) 380, 618
EcoRII CCWGG 2 cut(s) 178, 355
EcoRV GATATC 1 cut(s) 487
EcoT14I CCWWGG 3 cut(s) 129, 586, 674
EcoT38I GRGCYC 2 cut(s) 166, 332
EgeI GGCGCC 1 cut(s) 347
EheI GGCGCC 1 cut(s) 347
ErhI CCWWGG 3 cut(s) 129, 586, 674
Esp3I CGTCTC 3 cut(s) 202, 252, 553
FaeI CATG 3 cut(s) 122, 220, 232
FaiI YATR 6 cut(s) 120, 218, 230, 259, 343, 513
FaqI GGGAC 1 cut(s) 374
FatI CATG 3 cut(s) 118, 216, 228
FauI CCCGC 6 cut(s) 59, 72, 173, 301, 542, 552
FblI GTMKAC 2 cut(s) 123, 239
Fnu4HI GCNGC 5 cut(s) 221, 280, 283, 286, 696
FriOI GRGCYC 2 cut(s) 166, 332
Fsp4HI GCNGC 5 cut(s) 221, 280, 283, 286, 696
FspBI CTAG 1 cut(s) 675
GlaI GCGC 6 cut(s) 84, 215, 347, 592, 637, 689
GluI GCNGC 5 cut(s) 221, 280, 283, 286, 696
GsaI CCCAGC 1 cut(s) 439
HaeII RGCGCY 1 cut(s) 349
HaeIII GGCC 3 cut(s) 152, 172, 279
HapII CCGG 9 cut(s) 270, 316, 371, 395, 447, 552, 603, 619, 715
HgaI GACGC 4 cut(s) 225, 395, 419, 429
HhaI GCGC 6 cut(s) 85, 216, 348, 593, 638, 690
Hin1I GRCGYC 4 cut(s) 245, 346, 411, 421
Hin1II CATG 3 cut(s) 122, 220, 232
Hin6I GCGC 6 cut(s) 83, 214, 346, 591, 636, 688
HinP1I GCGC 6 cut(s) 83, 214, 346, 591, 636, 688
HincII GTYRAC 3 cut(s) 108, 124, 240
HindII GTYRAC 3 cut(s) 108, 124, 240
HinfI GANTC 5 cut(s) 109, 125, 426, 471, 500
HpaII CCGG 9 cut(s) 270, 316, 371, 395, 447, 552, 603, 619, 715
HphI GGTGA 3 cut(s) 92, 326, 535
Hpy166II GTNNAC 4 cut(s) 48, 108, 124, 240
Hpy188I TCNGA 1 cut(s) 409
Hpy188III TCNNGA 4 cut(s) 22, 144, 395, 552
Hpy8I GTNNAC 4 cut(s) 48, 108, 124, 240
Hpy99I CGWCG 5 cut(s) 241, 244, 247, 423, 527
HpyAV CCTTC 2 cut(s) 28, 362
HpyCH4III ACNGT 1 cut(s) 547
HpyCH4IV ACGT 1 cut(s) 245
HpyCH4V TGCA 2 cut(s) 48, 652
HpyF10VI GCNNNNNNNGC 5 cut(s) 211, 220, 279, 285, 599
HpyF3I CTNAG 2 cut(s) 465, 476
HpySE526I ACGT 1 cut(s) 245
Hsp92I GRCGYC 4 cut(s) 245, 346, 411, 421
Hsp92II CATG 3 cut(s) 122, 220, 232
HspAI GCGC 6 cut(s) 83, 214, 346, 591, 636, 688
KasI GGCGCC 1 cut(s) 345
Kpn2I TCCGGA 2 cut(s) 394, 551
Kzo9I GATC 5 cut(s) 27, 60, 231, 540, 629
LmnI GCTCC 2 cut(s) 161, 182
Lsp1109I GCAGC 1 cut(s) 207
LweI GCATC 1 cut(s) 182
MaeI CTAG 1 cut(s) 675
MaeII ACGT 1 cut(s) 245
MaeIII GTNAC 2 cut(s) 174, 460
MalI GATC 5 cut(s) 29, 62, 233, 542, 631
MboI GATC 5 cut(s) 27, 60, 231, 540, 629
MboII GAAGA 2 cut(s) 37, 530
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 5 cut(s) 50, 166, 187, 322, 332
MluCI AATT 2 cut(s) 403, 594
Mly113I GGCGCC 1 cut(s) 346
MlyI GAGTC 3 cut(s) 103, 119, 509
MnlI CCTC 7 cut(s) 307, 348, 376, 389, 616, 681, 715
MroI TCCGGA 2 cut(s) 394, 551
MseI TTAA 1 cut(s) 96
MslI CAYNNNNRTG 3 cut(s) 190, 603, 647
MspI CCGG 9 cut(s) 270, 316, 371, 395, 447, 552, 603, 619, 715
MspR9I CCNGG 9 cut(s) 180, 270, 317, 357, 371, 447, 619, 620, 715
MvaI CCWGG 2 cut(s) 180, 357
MvnI CGCG 1 cut(s) 236
MwoI GCNNNNNNNGC 5 cut(s) 211, 220, 279, 285, 599
NarI GGCGCC 1 cut(s) 346
NciI CCSGG 7 cut(s) 270, 317, 371, 447, 619, 620, 715
NdeII GATC 5 cut(s) 27, 60, 231, 540, 629
NlaIII CATG 3 cut(s) 122, 220, 232
NlaIV GGNNCC 4 cut(s) 62, 163, 314, 347
NmeAIII GCCGAG 3 cut(s) 231, 506, 521
NspI RCATGY 2 cut(s) 122, 220
OliI CACNNNNGTG 1 cut(s) 603
PaeI GCATGC 1 cut(s) 220
PaeR7I CTCGAG 1 cut(s) 380
PciI ACATGT 1 cut(s) 118
PcsI WCGNNNNNNNCGW 1 cut(s) 193
PfeI GAWTC 2 cut(s) 426, 471
PflFI GACNNNGTC 2 cut(s) 244, 311
PkrI GCNGC 5 cut(s) 222, 281, 284, 287, 697
PleI GAGTC 3 cut(s) 103, 119, 508
PluTI GGCGCC 1 cut(s) 349
PpsI GAGTC 3 cut(s) 103, 119, 508
PscI ACATGT 1 cut(s) 118
Psp6I CCWGG 2 cut(s) 178, 355
PspFI CCCAGC 1 cut(s) 435
PspGI CCWGG 2 cut(s) 178, 355
PspN4I GGNNCC 4 cut(s) 62, 163, 314, 347
PspPI GGNCC 4 cut(s) 133, 150, 313, 373
PspXI VCTCGAGB 1 cut(s) 380
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 2 cut(s) 244, 311
RsaI GTAC 1 cut(s) 614
RsaNI GTAC 1 cut(s) 613
RseI CAYNNNNRTG 3 cut(s) 190, 603, 647
Rsr2I CGGWCCG 1 cut(s) 373
RsrII CGGWCCG 1 cut(s) 373
SalI GTCGAC 2 cut(s) 122, 238
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 5 cut(s) 221, 280, 283, 286, 696
Sau3AI GATC 5 cut(s) 27, 60, 231, 540, 629
Sau96I GGNCC 4 cut(s) 133, 150, 313, 373
SchI GAGTC 3 cut(s) 103, 119, 509
ScrFI CCNGG 9 cut(s) 180, 270, 317, 357, 371, 447, 619, 620, 715
SduI GDGCHC 5 cut(s) 50, 166, 187, 322, 332
SetI ASST 4 cut(s) 36, 77, 248, 437
SfaNI GCATC 1 cut(s) 182
SfoI GGCGCC 1 cut(s) 347
Sfr274I CTCGAG 1 cut(s) 380
SgrAI CRCCGGYG 1 cut(s) 602
SgrDI CGTCGACG 1 cut(s) 238
SinI GGWCC 3 cut(s) 133, 313, 373
SlaI CTCGAG 1 cut(s) 380
SmaI CCCGGG 1 cut(s) 620
SmiMI CAYNNNNRTG 3 cut(s) 190, 603, 647
SmlI CTYRAG 2 cut(s) 380, 430
SmoI CTYRAG 2 cut(s) 380, 430
SphI GCATGC 1 cut(s) 220
Sse9I AATT 2 cut(s) 403, 594
SspDI GGCGCC 1 cut(s) 345
SspMI CTAG 1 cut(s) 675
StyD4I CCNGG 9 cut(s) 178, 268, 315, 355, 369, 445, 617, 618, 713
StyI CCWWGG 3 cut(s) 129, 586, 674
TaaI ACNGT 1 cut(s) 547
TaiI ACGT 1 cut(s) 248
TaqI TCGA 6 cut(s) 12, 23, 123, 239, 381, 628
TaqII GACCGA 1 cut(s) 26
TasI AATT 2 cut(s) 403, 594
TauI GCSGC 4 cut(s) 282, 285, 288, 698
TfiI GAWTC 2 cut(s) 426, 471
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TseI GCWGC 1 cut(s) 220
TspDTI ATGAA 1 cut(s) 564
TspGWI ACGGA 2 cut(s) 125, 479
TspMI CCCGGG 1 cut(s) 618
Tth111I GACNNNGTC 2 cut(s) 244, 311
VneI GTGCAC 1 cut(s) 46
VpaK11BI GGWCC 3 cut(s) 133, 313, 373
XceI RCATGY 2 cut(s) 122, 220
XhoI CTCGAG 1 cut(s) 380
XmaI CCCGGG 1 cut(s) 618
XmaJI CCTAGG 1 cut(s) 674
XmiI GTMKAC 2 cut(s) 123, 239
XspI CTAG 1 cut(s) 675
ZraI GACGTC 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.