Rroxscaffold_18G00446050

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000018
OG0000037
Physical Location & Seq
Forward (+)
19772 .. 21053
1282 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_18G00446050.1

Sequence Viewer

Length: 852 bp
ATGCCGAAGCACGCCGAGACGGCGCATGCCGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATCGGGGCTGCATTCCCAAACAACCCGACTCGCCGACGCCGCTCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCCGAGGACGCTTCTCCGTACTACAATTCGGACGCCTTACGACGCCGCATTCTCAAGCCGGGCTATTCCCGTTCGCTCGCCGTTACTAAGGGAATCCTTAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGACGGCGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCGCACGCCCGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCGCCGTTGAAACATGTTCTCGGTCGTTCGCTAGGCAGGTTTCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

283

Amino Acids

31.49

Weight (kDa)

11.27

Isoelectric Point (pI)

72.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 57
Acc36I ACCTGC 2 cut(s) 775, 799
AccB1I GGYRCC 1 cut(s) 404
AccBSI CCGCTC 1 cut(s) 354
AccI GTMKAC 1 cut(s) 48
AccII CGCG 2 cut(s) 45, 253
AccIII TCCGGA 1 cut(s) 589
AclWI GGATC 1 cut(s) 793
AcoI YGGCCR 1 cut(s) 86
AcsI RAATTY 1 cut(s) 300
AcyI GRCGYC 5 cut(s) 54, 349, 405, 471, 481
AfaI GTAC 2 cut(s) 256, 458
AfiI CCNNNNNNNGG 7 cut(s) 84, 316, 415, 416, 417, 596, 808
AflIII ACRYGT 1 cut(s) 761
AgsI TTSAA 5 cut(s) 206, 229, 556, 617, 758
AjnI CCWGG 1 cut(s) 414
AleI CACNNNNGTG 1 cut(s) 640
Alw26I GTCTC 4 cut(s) 11, 61, 277, 591
AlwI GGATC 1 cut(s) 793
Ama87I CYCGRG 2 cut(s) 118, 654
Aor13HI TCCGGA 1 cut(s) 589
AoxI GGCC 1 cut(s) 86
ApeKI GCWGC 1 cut(s) 320
ApoI RAATTY 1 cut(s) 300
AspA2I CCTAGG 1 cut(s) 710
AspLEI GCGC 6 cut(s) 25, 169, 407, 630, 674, 726
AspS9I GGNCC 4 cut(s) 109, 133, 372, 432
AsuC2I CCSGG 6 cut(s) 79, 376, 430, 498, 655, 656
AsuHPI GGTGA 3 cut(s) 385, 573, 806
AvaI CYCGRG 2 cut(s) 118, 654
AvaII GGWCC 4 cut(s) 109, 133, 372, 432
AvrII CCTAGG 1 cut(s) 710
BaeGI GKGCMC 1 cut(s) 381
BanI GGYRCC 1 cut(s) 404
BanII GRGCYC 1 cut(s) 391
BauI CACGAG 1 cut(s) 357
BbsI GAAGAC 1 cut(s) 563
BbvI GCAGC 1 cut(s) 307
BccI CCATC 1 cut(s) 189
BceAI ACGGC 4 cut(s) 36, 503, 610, 737
BciT130I CCWGG 1 cut(s) 416
BcnI CCSGG 6 cut(s) 79, 376, 430, 498, 655, 656
BcoDI GTCTC 4 cut(s) 11, 61, 277, 591
BfaI CTAG 2 cut(s) 711, 780
BfoI RGCGCY 1 cut(s) 408
BfuAI ACCTGC 2 cut(s) 775, 799
BglI GCCNNNNNGGC 1 cut(s) 20
BisI GCNGC 9 cut(s) 30, 89, 92, 95, 175, 321, 352, 484, 732
BlnI CCTAGG 1 cut(s) 710
BlsI GCNGC 9 cut(s) 31, 90, 93, 96, 176, 322, 353, 485, 733
Bme1390I CCNGG 7 cut(s) 79, 376, 416, 430, 498, 655, 656
Bme18I GGWCC 4 cut(s) 109, 133, 372, 432
BmeT110I CYCGRG 2 cut(s) 118, 654
BmgT120I GGNCC 4 cut(s) 109, 133, 372, 432
BmiI GGNNCC 2 cut(s) 373, 406
BmrFI CCNGG 7 cut(s) 79, 376, 416, 430, 498, 655, 656
BmsI GCATC 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 563
BpuEI CTTGAG 1 cut(s) 476
BpuMI CCSGG 6 cut(s) 79, 376, 430, 498, 655, 656
BsaHI GRCGYC 5 cut(s) 54, 349, 405, 471, 481
BsaI GGTCTC 1 cut(s) 277
BsaJI CCNNGG 8 cut(s) 60, 162, 291, 415, 441, 623, 654, 710
BsaWI WCCGGW 1 cut(s) 589
BsaXI ACNNNNNCTCC 3 cut(s) 41, 71, 824
Bsc4I CCNNNNNNNGG 7 cut(s) 84, 316, 415, 416, 417, 596, 808
Bse118I RCCGGY 2 cut(s) 135, 639
BseAI TCCGGA 1 cut(s) 589
BseBI CCWGG 1 cut(s) 416
BseDI CCNNGG 8 cut(s) 60, 162, 291, 415, 441, 623, 654, 710
BseGI GGATG 2 cut(s) 154, 181
BseLI CCNNNNNNNGG 7 cut(s) 84, 316, 415, 416, 417, 596, 808
BseSI GKGCMC 1 cut(s) 381
BseXI GCAGC 1 cut(s) 307
Bsh1236I CGCG 2 cut(s) 45, 253
Bsh1285I CGRYCG 3 cut(s) 162, 315, 773
BshFI GGCC 1 cut(s) 88
BshNI GGYRCC 1 cut(s) 404
BsiEI CGRYCG 3 cut(s) 162, 315, 773
BsiHKCI CYCGRG 2 cut(s) 118, 654
BsiSI CCGG 8 cut(s) 79, 136, 375, 430, 497, 590, 640, 655
BslFI GGGAC 1 cut(s) 433
BslI CCNNNNNNNGG 7 cut(s) 84, 316, 415, 416, 417, 596, 808
BsmAI GTCTC 4 cut(s) 11, 61, 277, 591
BsmBI CGTCTC 3 cut(s) 11, 61, 591
BsmFI GGGAC 1 cut(s) 433
BsmI GAATGC 2 cut(s) 323, 486
BsnI GGCC 1 cut(s) 88
Bso31I GGTCTC 1 cut(s) 277
BsoBI CYCGRG 2 cut(s) 118, 654
Bsp1286I GDGCHC 2 cut(s) 381, 391
Bsp13I TCCGGA 1 cut(s) 589
Bsp143I GATC 5 cut(s) 40, 312, 578, 665, 798
BspANI GGCC 1 cut(s) 88
BspEI TCCGGA 1 cut(s) 589
BspFNI CGCG 2 cut(s) 45, 253
BspLI GGNNCC 2 cut(s) 373, 406
BspMI ACCTGC 2 cut(s) 775, 799
BspPI GGATC 1 cut(s) 793
BspT107I GGYRCC 1 cut(s) 404
BspTNI GGTCTC 1 cut(s) 277
BsrBI CCGCTC 1 cut(s) 354
BsrFI RCCGGY 2 cut(s) 135, 639
BssAI RCCGGY 2 cut(s) 135, 639
BssECI CCNNGG 8 cut(s) 60, 162, 291, 415, 441, 623, 654, 710
BssMI GATC 5 cut(s) 40, 312, 578, 665, 798
BssNI GRCGYC 5 cut(s) 54, 349, 405, 471, 481
BssSI CACGAG 1 cut(s) 357
BssT1I CCWWGG 3 cut(s) 291, 623, 710
Bst2BI CACGAG 1 cut(s) 357
Bst2UI CCWGG 1 cut(s) 416
Bst4CI ACNGT 3 cut(s) 109, 148, 585
BstACI GRCGYC 5 cut(s) 54, 349, 405, 471, 481
BstC8I GCNNGC 5 cut(s) 12, 27, 516, 651, 676
BstDEI CTNAG 2 cut(s) 525, 536
BstDSI CCRYGG 1 cut(s) 60
BstENI CCTNNNNNAGG 1 cut(s) 806
BstF5I GGATG 2 cut(s) 154, 181
BstFNI CGCG 2 cut(s) 45, 253
BstH2I RGCGCY 1 cut(s) 408
BstHHI GCGC 6 cut(s) 25, 169, 407, 630, 674, 726
BstKTI GATC 5 cut(s) 43, 315, 581, 668, 801
BstMAI GTCTC 4 cut(s) 11, 61, 277, 591
BstMBI GATC 5 cut(s) 40, 312, 578, 665, 798
BstMCI CGRYCG 3 cut(s) 162, 315, 773
BstMWI GCNNNNNNNGC 7 cut(s) 20, 29, 88, 94, 351, 603, 636
BstNI CCWGG 1 cut(s) 416
BstNSI RCATGY 2 cut(s) 29, 765
BstSCI CCNGG 7 cut(s) 77, 374, 414, 428, 496, 653, 654
BstSLI GKGCMC 1 cut(s) 381
BstUI CGCG 2 cut(s) 45, 253
BstV1I GCAGC 1 cut(s) 307
BstV2I GAAGAC 1 cut(s) 563
BsuRI GGCC 1 cut(s) 88
BtgI CCRYGG 1 cut(s) 60
BtgZI GCGATG 1 cut(s) 155
BtsCI GGATG 2 cut(s) 154, 181
BveI ACCTGC 2 cut(s) 775, 799
Cac8I GCNNGC 5 cut(s) 12, 27, 516, 651, 676
CfoI GCGC 6 cut(s) 25, 169, 407, 630, 674, 726
Cfr10I RCCGGY 2 cut(s) 135, 639
Cfr13I GGNCC 4 cut(s) 109, 133, 372, 432
Cfr9I CCCGGG 1 cut(s) 654
CpoI CGGWCCG 2 cut(s) 133, 432
CseI GACGC 5 cut(s) 34, 357, 455, 479, 489
Csp6I GTAC 2 cut(s) 255, 457
CspI CGGWCCG 2 cut(s) 133, 432
CviAII CATG 3 cut(s) 26, 38, 762
CviQI GTAC 2 cut(s) 255, 457
DdeI CTNAG 2 cut(s) 525, 536
DinI GGCGCC 1 cut(s) 406
DpnI GATC 5 cut(s) 42, 314, 580, 667, 800
DpnII GATC 5 cut(s) 40, 312, 578, 665, 798
EaeI YGGCCR 1 cut(s) 86
EciI GGCGGA 3 cut(s) 146, 424, 733
Eco130I CCWWGG 3 cut(s) 291, 623, 710
Eco24I GRGCYC 1 cut(s) 391
Eco31I GGTCTC 1 cut(s) 277
Eco47I GGWCC 4 cut(s) 109, 133, 372, 432
Eco88I CYCGRG 2 cut(s) 118, 654
EcoNI CCTNNNNNAGG 1 cut(s) 806
EcoRII CCWGG 1 cut(s) 414
EcoT14I CCWWGG 3 cut(s) 291, 623, 710
EcoT38I GRGCYC 1 cut(s) 391
EgeI GGCGCC 1 cut(s) 406
EheI GGCGCC 1 cut(s) 406
ErhI CCWWGG 3 cut(s) 291, 623, 710
Esp3I CGTCTC 3 cut(s) 11, 61, 591
FaeI CATG 3 cut(s) 29, 41, 765
FaiI YATR 6 cut(s) 27, 39, 68, 402, 551, 763
FaqI GGGAC 1 cut(s) 433
FatI CATG 3 cut(s) 25, 37, 761
FauI CCCGC 3 cut(s) 580, 590, 757
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 9 cut(s) 30, 89, 92, 95, 175, 321, 352, 484, 732
FokI GGATG 2 cut(s) 141, 168
FriOI GRGCYC 1 cut(s) 391
Fsp4HI GCNGC 9 cut(s) 30, 89, 92, 95, 175, 321, 352, 484, 732
FspBI CTAG 2 cut(s) 711, 780
GlaI GCGC 6 cut(s) 24, 168, 406, 629, 673, 725
GluI GCNGC 9 cut(s) 30, 89, 92, 95, 175, 321, 352, 484, 732
HaeII RGCGCY 1 cut(s) 408
HaeIII GGCC 1 cut(s) 88
HapII CCGG 8 cut(s) 79, 136, 375, 430, 497, 590, 640, 655
HgaI GACGC 5 cut(s) 34, 357, 455, 479, 489
HhaI GCGC 6 cut(s) 25, 169, 407, 630, 674, 726
Hin1I GRCGYC 5 cut(s) 54, 349, 405, 471, 481
Hin1II CATG 3 cut(s) 29, 41, 765
Hin6I GCGC 6 cut(s) 23, 167, 405, 628, 672, 724
HinP1I GCGC 6 cut(s) 23, 167, 405, 628, 672, 724
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
HinfI GANTC 4 cut(s) 121, 218, 340, 531
HpaII CCGG 8 cut(s) 79, 136, 375, 430, 497, 590, 640, 655
HphI GGTGA 3 cut(s) 385, 573, 806
Hpy166II GTNNAC 3 cut(s) 49, 112, 814
Hpy188I TCNGA 3 cut(s) 159, 442, 469
Hpy188III TCNNGA 2 cut(s) 195, 590
Hpy8I GTNNAC 3 cut(s) 49, 112, 814
Hpy99I CGWCG 6 cut(s) 50, 53, 56, 351, 483, 565
HpyAV CCTTC 2 cut(s) 421, 812
HpyCH4III ACNGT 3 cut(s) 109, 148, 585
HpyCH4IV ACGT 1 cut(s) 54
HpyCH4V TGCA 2 cut(s) 323, 688
HpyF10VI GCNNNNNNNGC 7 cut(s) 20, 29, 88, 94, 351, 603, 636
HpyF3I CTNAG 2 cut(s) 525, 536
HpySE526I ACGT 1 cut(s) 54
Hsp92I GRCGYC 5 cut(s) 54, 349, 405, 471, 481
Hsp92II CATG 3 cut(s) 29, 41, 765
HspAI GCGC 6 cut(s) 23, 167, 405, 628, 672, 724
KasI GGCGCC 1 cut(s) 404
Kpn2I TCCGGA 1 cut(s) 589
Kzo9I GATC 5 cut(s) 40, 312, 578, 665, 798
Lsp1109I GCAGC 1 cut(s) 307
LweI GCATC 1 cut(s) 178
MaeI CTAG 2 cut(s) 711, 780
MaeII ACGT 1 cut(s) 54
MaeIII GTNAC 4 cut(s) 103, 142, 520, 830
MalI GATC 5 cut(s) 42, 314, 580, 667, 800
MbiI CCGCTC 1 cut(s) 354
MboI GATC 5 cut(s) 40, 312, 578, 665, 798
MboII GAAGA 1 cut(s) 568
MhlI GDGCHC 2 cut(s) 381, 391
MluCI AATT 4 cut(s) 200, 300, 463, 631
Mly113I GGCGCC 1 cut(s) 405
MlyI GAGTC 3 cut(s) 130, 212, 334
MmeI TCCRAC 1 cut(s) 182
MnlI CCTC 9 cut(s) 157, 202, 259, 407, 436, 448, 652, 717, 751
MroI TCCGGA 1 cut(s) 589
MslI CAYNNNNRTG 2 cut(s) 640, 683
MspI CCGG 8 cut(s) 79, 136, 375, 430, 497, 590, 640, 655
MspR9I CCNGG 7 cut(s) 79, 376, 416, 430, 498, 655, 656
Mva1269I GAATGC 2 cut(s) 323, 486
MvaI CCWGG 1 cut(s) 416
MvnI CGCG 2 cut(s) 45, 253
MwoI GCNNNNNNNGC 7 cut(s) 20, 29, 88, 94, 351, 603, 636
NarI GGCGCC 1 cut(s) 405
NciI CCSGG 6 cut(s) 79, 376, 430, 498, 655, 656
NdeII GATC 5 cut(s) 40, 312, 578, 665, 798
NlaIII CATG 3 cut(s) 29, 41, 765
NlaIV GGNNCC 2 cut(s) 373, 406
NmeAIII GCCGAG 1 cut(s) 40
NmuCI GTSAC 1 cut(s) 142
NspI RCATGY 2 cut(s) 29, 765
OliI CACNNNNGTG 1 cut(s) 640
PaeI GCATGC 1 cut(s) 29
PciI ACATGT 1 cut(s) 761
PcsI WCGNNNNNNNCGW 1 cut(s) 355
PctI GAATGC 2 cut(s) 323, 486
PfeI GAWTC 1 cut(s) 531
PflFI GACNNNGTC 2 cut(s) 53, 370
PkrI GCNGC 9 cut(s) 31, 90, 93, 96, 176, 322, 353, 485, 733
Ple19I CGATCG 1 cut(s) 315
PleI GAGTC 3 cut(s) 129, 212, 334
PluTI GGCGCC 1 cut(s) 408
PpsI GAGTC 3 cut(s) 129, 212, 334
PscI ACATGT 1 cut(s) 761
Psp6I CCWGG 1 cut(s) 414
PspGI CCWGG 1 cut(s) 414
PspN4I GGNNCC 2 cut(s) 373, 406
PspPI GGNCC 4 cut(s) 109, 133, 372, 432
PsyI GACNNNGTC 2 cut(s) 53, 370
PvuI CGATCG 1 cut(s) 315
RsaI GTAC 2 cut(s) 256, 458
RsaNI GTAC 2 cut(s) 255, 457
RseI CAYNNNNRTG 2 cut(s) 640, 683
Rsr2I CGGWCCG 2 cut(s) 133, 432
RsrII CGGWCCG 2 cut(s) 133, 432
SalI GTCGAC 1 cut(s) 47
SatI GCNGC 9 cut(s) 30, 89, 92, 95, 175, 321, 352, 484, 732
Sau3AI GATC 5 cut(s) 40, 312, 578, 665, 798
Sau96I GGNCC 4 cut(s) 109, 133, 372, 432
SchI GAGTC 3 cut(s) 130, 212, 334
ScrFI CCNGG 7 cut(s) 79, 376, 416, 430, 498, 655, 656
SduI GDGCHC 2 cut(s) 381, 391
SetI ASST 5 cut(s) 57, 789, 813, 819, 829
SfaNI GCATC 1 cut(s) 178
SfoI GGCGCC 1 cut(s) 406
SgrAI CRCCGGYG 1 cut(s) 639
SgrDI CGTCGACG 1 cut(s) 47
SinI GGWCC 4 cut(s) 109, 133, 372, 432
SmaI CCCGGG 1 cut(s) 656
SmiMI CAYNNNNRTG 2 cut(s) 640, 683
SmlI CTYRAG 1 cut(s) 491
SmoI CTYRAG 1 cut(s) 491
SphI GCATGC 1 cut(s) 29
Sse9I AATT 4 cut(s) 200, 300, 463, 631
SspDI GGCGCC 1 cut(s) 404
SspMI CTAG 2 cut(s) 711, 780
StyD4I CCNGG 7 cut(s) 77, 374, 414, 428, 496, 653, 654
StyI CCWWGG 3 cut(s) 291, 623, 710
TaaI ACNGT 3 cut(s) 109, 148, 585
TaiI ACGT 1 cut(s) 57
TaqI TCGA 4 cut(s) 48, 124, 664, 791
TaqII GACCGA 3 cut(s) 176, 259, 759
TasI AATT 4 cut(s) 200, 300, 463, 631
TauI GCSGC 8 cut(s) 32, 91, 94, 97, 177, 354, 486, 734
TfiI GAWTC 1 cut(s) 531
TseFI GTSAC 1 cut(s) 142
TseI GCWGC 1 cut(s) 320
Tsp45I GTSAC 1 cut(s) 142
TspDTI ATGAA 2 cut(s) 229, 601
TspGWI ACGGA 4 cut(s) 91, 312, 444, 835
TspMI CCCGGG 1 cut(s) 654
Tth111I GACNNNGTC 2 cut(s) 53, 370
VpaK11BI GGWCC 4 cut(s) 109, 133, 372, 432
XagI CCTNNNNNAGG 1 cut(s) 806
XapI RAATTY 1 cut(s) 300
XceI RCATGY 2 cut(s) 29, 765
XmaI CCCGGG 1 cut(s) 654
XmaJI CCTAGG 1 cut(s) 710
XmiI GTMKAC 1 cut(s) 48
XspI CTAG 2 cut(s) 711, 780
ZraI GACGTC 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.