Rroxscaffold_38G00444580

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000038
OG0000037
Physical Location & Seq
Forward (+)
60534 .. 61750
1217 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_38G00444580.1

Sequence Viewer

Length: 645 bp
ATGTCGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAATGGGGAGCCCGCAGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCCGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGGGACTTGTTCCCGGTCCGCCTCTCGAGGACGCTTCTCCGTACTACAATTCGGACGCCTTACGACGCCGCATTCTCAAGCCGGGCTATTCCCGTTCGCTCGCCGTTACTAAGGGAATCCTTCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGACGGCGGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCGCACGCCGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

214

Amino Acids

23.42

Weight (kDa)

11.18

Isoelectric Point (pI)

51.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 13
AatII GACGTC 1 cut(s) 129
AccI GTMKAC 2 cut(s) 5, 120
AccII CGCG 2 cut(s) 117, 327
AccIII TCCGGA 1 cut(s) 521
AcoI YGGCCR 1 cut(s) 159
AcyI GRCGYC 3 cut(s) 126, 383, 393
AfaI GTAC 1 cut(s) 370
AfiI CCNNNNNNNGG 4 cut(s) 60, 157, 328, 528
AgsI TTSAA 5 cut(s) 26, 280, 303, 488, 550
AjnI CCWGG 1 cut(s) 59
AleI CACNNNNGTG 1 cut(s) 573
Alw21I GWGCWC 1 cut(s) 68
Alw26I GTCTC 3 cut(s) 83, 133, 523
Ama87I CYCGRG 3 cut(s) 150, 191, 352
Aor13HI TCCGGA 1 cut(s) 521
AoxI GGCC 3 cut(s) 32, 159, 249
ApeKI GCWGC 1 cut(s) 50
AspLEI GCGC 4 cut(s) 97, 242, 563, 606
AspS9I GGNCC 6 cut(s) 15, 32, 182, 206, 250, 343
AsuC2I CCSGG 5 cut(s) 151, 152, 341, 410, 588
AsuHPI GGTGA 1 cut(s) 505
AvaI CYCGRG 3 cut(s) 150, 191, 352
AvaII GGWCC 4 cut(s) 15, 182, 206, 343
BanII GRGCYC 1 cut(s) 48
BbsI GAAGAC 1 cut(s) 495
Bbv12I GWGCWC 1 cut(s) 68
BbvI GCAGC 1 cut(s) 62
BccI CCATC 1 cut(s) 263
BceAI ACGGC 4 cut(s) 38, 108, 415, 542
BciT130I CCWGG 1 cut(s) 61
BcnI CCSGG 5 cut(s) 151, 152, 341, 410, 588
BcoDI GTCTC 3 cut(s) 83, 133, 523
BfaI CTAG 1 cut(s) 643
BglI GCCNNNNNGGC 1 cut(s) 92
BisI GCNGC 6 cut(s) 51, 102, 162, 165, 168, 396
BlsI GCNGC 6 cut(s) 52, 103, 163, 166, 169, 397
Bme1390I CCNGG 6 cut(s) 61, 151, 152, 341, 410, 588
Bme18I GGWCC 4 cut(s) 15, 182, 206, 343
BmeT110I CYCGRG 3 cut(s) 150, 191, 352
BmgT120I GGNCC 6 cut(s) 15, 32, 182, 206, 250, 343
BmiI GGNNCC 2 cut(s) 45, 252
BmrFI CCNGG 6 cut(s) 61, 151, 152, 341, 410, 588
BmsI GCATC 2 cut(s) 63, 251
BpiI GAAGAC 1 cut(s) 495
BpuEI CTTGAG 1 cut(s) 388
BpuMI CCSGG 5 cut(s) 151, 152, 341, 410, 588
BsaHI GRCGYC 3 cut(s) 126, 383, 393
BsaJI CCNNGG 5 cut(s) 11, 132, 150, 235, 556
BsaWI WCCGGW 1 cut(s) 521
BsaXI ACNNNNNCTCC 2 cut(s) 113, 143
Bsc4I CCNNNNNNNGG 4 cut(s) 60, 157, 328, 528
Bse118I RCCGGY 3 cut(s) 208, 247, 572
BseAI TCCGGA 1 cut(s) 521
BseBI CCWGG 1 cut(s) 61
BseDI CCNNGG 5 cut(s) 11, 132, 150, 235, 556
BseGI GGATG 2 cut(s) 227, 255
BseLI CCNNNNNNNGG 4 cut(s) 60, 157, 328, 528
BseXI GCAGC 1 cut(s) 62
Bsh1236I CGCG 2 cut(s) 117, 327
Bsh1285I CGRYCG 1 cut(s) 235
BshFI GGCC 3 cut(s) 34, 161, 251
BsiEI CGRYCG 1 cut(s) 235
BsiHKAI GWGCWC 1 cut(s) 68
BsiHKCI CYCGRG 3 cut(s) 150, 191, 352
BsiSI CCGG 8 cut(s) 151, 209, 248, 341, 409, 522, 573, 587
BslFI GGGAC 1 cut(s) 344
BslI CCNNNNNNNGG 4 cut(s) 60, 157, 328, 528
BsmAI GTCTC 3 cut(s) 83, 133, 523
BsmBI CGTCTC 3 cut(s) 83, 133, 523
BsmFI GGGAC 1 cut(s) 344
BsmI GAATGC 1 cut(s) 398
BsnI GGCC 3 cut(s) 34, 161, 251
BsoBI CYCGRG 3 cut(s) 150, 191, 352
Bsp1286I GDGCHC 2 cut(s) 48, 68
Bsp13I TCCGGA 1 cut(s) 521
Bsp143I GATC 3 cut(s) 112, 510, 597
BspANI GGCC 3 cut(s) 34, 161, 251
BspEI TCCGGA 1 cut(s) 521
BspFNI CGCG 2 cut(s) 117, 327
BspLI GGNNCC 2 cut(s) 45, 252
BsrFI RCCGGY 3 cut(s) 208, 247, 572
BssAI RCCGGY 3 cut(s) 208, 247, 572
BssECI CCNNGG 5 cut(s) 11, 132, 150, 235, 556
BssMI GATC 3 cut(s) 112, 510, 597
BssNI GRCGYC 3 cut(s) 126, 383, 393
BssT1I CCWWGG 2 cut(s) 11, 556
Bst2UI CCWGG 1 cut(s) 61
Bst4CI ACNGT 3 cut(s) 182, 221, 517
BstACI GRCGYC 3 cut(s) 126, 383, 393
BstC8I GCNNGC 8 cut(s) 48, 68, 84, 99, 249, 428, 584, 608
BstDEI CTNAG 1 cut(s) 437
BstDSI CCRYGG 1 cut(s) 132
BstF5I GGATG 2 cut(s) 227, 255
BstFNI CGCG 2 cut(s) 117, 327
BstHHI GCGC 4 cut(s) 97, 242, 563, 606
BstKTI GATC 3 cut(s) 115, 513, 600
BstMAI GTCTC 3 cut(s) 83, 133, 523
BstMBI GATC 3 cut(s) 112, 510, 597
BstMCI CGRYCG 1 cut(s) 235
BstMWI GCNNNNNNNGC 6 cut(s) 92, 101, 161, 167, 248, 569
BstNI CCWGG 1 cut(s) 61
BstNSI RCATGY 1 cut(s) 101
BstSCI CCNGG 6 cut(s) 59, 149, 150, 339, 408, 586
BstUI CGCG 2 cut(s) 117, 327
BstV1I GCAGC 1 cut(s) 62
BstV2I GAAGAC 1 cut(s) 495
BsuRI GGCC 3 cut(s) 34, 161, 251
BtgI CCRYGG 1 cut(s) 132
BtgZI GCGATG 1 cut(s) 228
BtsCI GGATG 2 cut(s) 227, 255
Cac8I GCNNGC 8 cut(s) 48, 68, 84, 99, 249, 428, 584, 608
CfoI GCGC 4 cut(s) 97, 242, 563, 606
Cfr10I RCCGGY 3 cut(s) 208, 247, 572
Cfr13I GGNCC 6 cut(s) 15, 32, 182, 206, 250, 343
Cfr9I CCCGGG 1 cut(s) 150
CpoI CGGWCCG 2 cut(s) 206, 343
CseI GACGC 4 cut(s) 106, 367, 391, 401
Csp6I GTAC 1 cut(s) 369
CspI CGGWCCG 2 cut(s) 206, 343
CviAII CATG 2 cut(s) 98, 110
CviQI GTAC 1 cut(s) 369
DdeI CTNAG 1 cut(s) 437
DpnI GATC 3 cut(s) 114, 512, 599
DpnII GATC 3 cut(s) 112, 510, 597
DrdI GACNNNNNNGTC 1 cut(s) 13
DseDI GACNNNNNNGTC 1 cut(s) 13
EaeI YGGCCR 1 cut(s) 159
EciI GGCGGA 2 cut(s) 219, 335
Eco130I CCWWGG 2 cut(s) 11, 556
Eco24I GRGCYC 1 cut(s) 48
Eco32I GATATC 1 cut(s) 457
Eco47I GGWCC 4 cut(s) 15, 182, 206, 343
Eco88I CYCGRG 3 cut(s) 150, 191, 352
EcoRII CCWGG 1 cut(s) 59
EcoRV GATATC 1 cut(s) 457
EcoT14I CCWWGG 2 cut(s) 11, 556
EcoT38I GRGCYC 1 cut(s) 48
ErhI CCWWGG 2 cut(s) 11, 556
Esp3I CGTCTC 3 cut(s) 83, 133, 523
FaeI CATG 2 cut(s) 101, 113
FaiI YATR 4 cut(s) 99, 111, 140, 483
FaqI GGGAC 1 cut(s) 344
FatI CATG 2 cut(s) 97, 109
FauI CCCGC 4 cut(s) 55, 320, 512, 522
FblI GTMKAC 2 cut(s) 5, 120
Fnu4HI GCNGC 6 cut(s) 51, 102, 162, 165, 168, 396
FokI GGATG 2 cut(s) 214, 242
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 6 cut(s) 51, 102, 162, 165, 168, 396
FspBI CTAG 1 cut(s) 643
GlaI GCGC 4 cut(s) 96, 241, 562, 605
GluI GCNGC 6 cut(s) 51, 102, 162, 165, 168, 396
HaeIII GGCC 3 cut(s) 34, 161, 251
HapII CCGG 8 cut(s) 151, 209, 248, 341, 409, 522, 573, 587
HgaI GACGC 4 cut(s) 106, 367, 391, 401
HhaI GCGC 4 cut(s) 97, 242, 563, 606
Hin1I GRCGYC 3 cut(s) 126, 383, 393
Hin1II CATG 2 cut(s) 101, 113
Hin6I GCGC 4 cut(s) 95, 240, 561, 604
HinP1I GCGC 4 cut(s) 95, 240, 561, 604
HincII GTYRAC 2 cut(s) 6, 121
HindII GTYRAC 2 cut(s) 6, 121
HinfI GANTC 5 cut(s) 7, 194, 292, 443, 470
HpaII CCGG 8 cut(s) 151, 209, 248, 341, 409, 522, 573, 587
HphI GGTGA 1 cut(s) 505
Hpy166II GTNNAC 3 cut(s) 6, 121, 185
Hpy188I TCNGA 3 cut(s) 232, 381, 452
Hpy188III TCNNGA 4 cut(s) 26, 269, 352, 522
Hpy8I GTNNAC 3 cut(s) 6, 121, 185
Hpy99I CGWCG 5 cut(s) 122, 125, 128, 395, 497
HpyAV CCTTC 1 cut(s) 457
HpyCH4III ACNGT 3 cut(s) 182, 221, 517
HpyCH4IV ACGT 1 cut(s) 126
HpyCH4V TGCA 1 cut(s) 620
HpyF10VI GCNNNNNNNGC 6 cut(s) 92, 101, 161, 167, 248, 569
HpyF3I CTNAG 1 cut(s) 437
HpySE526I ACGT 1 cut(s) 126
Hsp92I GRCGYC 3 cut(s) 126, 383, 393
Hsp92II CATG 2 cut(s) 101, 113
HspAI GCGC 4 cut(s) 95, 240, 561, 604
Kpn2I TCCGGA 1 cut(s) 521
KroI GCCGGC 1 cut(s) 247
KroNI GCCGGC 1 cut(s) 249
Kzo9I GATC 3 cut(s) 112, 510, 597
LmnI GCTCC 2 cut(s) 43, 63
Lsp1109I GCAGC 1 cut(s) 62
LweI GCATC 2 cut(s) 63, 251
MaeI CTAG 1 cut(s) 643
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 4 cut(s) 55, 176, 215, 432
MalI GATC 3 cut(s) 114, 512, 599
MboI GATC 3 cut(s) 112, 510, 597
MboII GAAGA 1 cut(s) 500
MhlI GDGCHC 2 cut(s) 48, 68
MluCI AATT 3 cut(s) 274, 375, 564
MlyI GAGTC 3 cut(s) 203, 286, 479
MmeI TCCRAC 1 cut(s) 255
MnlI CCTC 6 cut(s) 230, 276, 333, 348, 359, 584
MroI TCCGGA 1 cut(s) 521
MroNI GCCGGC 1 cut(s) 247
MslI CAYNNNNRTG 3 cut(s) 71, 573, 615
MspI CCGG 8 cut(s) 151, 209, 248, 341, 409, 522, 573, 587
MspR9I CCNGG 6 cut(s) 61, 151, 152, 341, 410, 588
Mva1269I GAATGC 1 cut(s) 398
MvaI CCWGG 1 cut(s) 61
MvnI CGCG 2 cut(s) 117, 327
MwoI GCNNNNNNNGC 6 cut(s) 92, 101, 161, 167, 248, 569
NaeI GCCGGC 1 cut(s) 249
NciI CCSGG 5 cut(s) 151, 152, 341, 410, 588
NdeII GATC 3 cut(s) 112, 510, 597
NgoMIV GCCGGC 1 cut(s) 247
NlaIII CATG 2 cut(s) 101, 113
NlaIV GGNNCC 2 cut(s) 45, 252
NmeAIII GCCGAG 2 cut(s) 112, 491
NmuCI GTSAC 1 cut(s) 215
NspI RCATGY 1 cut(s) 101
OliI CACNNNNGTG 1 cut(s) 573
PaeI GCATGC 1 cut(s) 101
PaeR7I CTCGAG 1 cut(s) 352
PcsI WCGNNNNNNNCGW 1 cut(s) 74
PctI GAATGC 1 cut(s) 398
PdiI GCCGGC 1 cut(s) 249
PfeI GAWTC 1 cut(s) 443
PflFI GACNNNGTC 1 cut(s) 125
PkrI GCNGC 6 cut(s) 52, 103, 163, 166, 169, 397
PleI GAGTC 3 cut(s) 202, 286, 478
PpsI GAGTC 3 cut(s) 202, 286, 478
Psp6I CCWGG 1 cut(s) 59
PspGI CCWGG 1 cut(s) 59
PspN4I GGNNCC 2 cut(s) 45, 252
PspPI GGNCC 6 cut(s) 15, 32, 182, 206, 250, 343
PsyI GACNNNGTC 1 cut(s) 125
RsaI GTAC 1 cut(s) 370
RsaNI GTAC 1 cut(s) 369
RseI CAYNNNNRTG 3 cut(s) 71, 573, 615
Rsr2I CGGWCCG 2 cut(s) 206, 343
RsrII CGGWCCG 2 cut(s) 206, 343
SalI GTCGAC 2 cut(s) 4, 119
SatI GCNGC 6 cut(s) 51, 102, 162, 165, 168, 396
Sau3AI GATC 3 cut(s) 112, 510, 597
Sau96I GGNCC 6 cut(s) 15, 32, 182, 206, 250, 343
SchI GAGTC 3 cut(s) 203, 286, 479
ScrFI CCNGG 6 cut(s) 61, 151, 152, 341, 410, 588
SduI GDGCHC 2 cut(s) 48, 68
SetI ASST 1 cut(s) 129
SfaNI GCATC 2 cut(s) 63, 251
Sfr274I CTCGAG 1 cut(s) 352
SgrAI CRCCGGYG 1 cut(s) 572
SgrDI CGTCGACG 1 cut(s) 119
SinI GGWCC 4 cut(s) 15, 182, 206, 343
SlaI CTCGAG 1 cut(s) 352
SmaI CCCGGG 1 cut(s) 152
SmiMI CAYNNNNRTG 3 cut(s) 71, 573, 615
SmlI CTYRAG 2 cut(s) 352, 403
SmoI CTYRAG 2 cut(s) 352, 403
SphI GCATGC 1 cut(s) 101
SrfI GCCCGGGC 1 cut(s) 152
Sse9I AATT 3 cut(s) 274, 375, 564
SspMI CTAG 1 cut(s) 643
StyD4I CCNGG 6 cut(s) 59, 149, 150, 339, 408, 586
StyI CCWWGG 2 cut(s) 11, 556
TaaI ACNGT 3 cut(s) 182, 221, 517
TaiI ACGT 1 cut(s) 129
TaqI TCGA 5 cut(s) 5, 120, 197, 353, 596
TaqII GACCGA 1 cut(s) 249
TasI AATT 3 cut(s) 274, 375, 564
TauI GCSGC 5 cut(s) 104, 164, 167, 170, 398
TfiI GAWTC 1 cut(s) 443
TseFI GTSAC 1 cut(s) 215
TseI GCWGC 1 cut(s) 50
Tsp45I GTSAC 1 cut(s) 215
TspDTI ATGAA 2 cut(s) 303, 534
TspGWI ACGGA 4 cut(s) 7, 164, 356, 449
TspMI CCCGGG 1 cut(s) 150
Tth111I GACNNNGTC 1 cut(s) 125
VpaK11BI GGWCC 4 cut(s) 15, 182, 206, 343
XceI RCATGY 1 cut(s) 101
XhoI CTCGAG 1 cut(s) 352
XmaI CCCGGG 1 cut(s) 150
XmiI GTMKAC 2 cut(s) 5, 120
XspI CTAG 1 cut(s) 643
ZraI GACGTC 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.