Rroxscaffold_48G00448490

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000048
OG0000037
Physical Location & Seq
Forward (+)
47481 .. 48948
1468 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_48G00448490.1

Sequence Viewer

Length: 627 bp
ATGCTCACACTCGAACCCTTCTCGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCGACTCCTTGGTCCGTGTTTCAAGACGGCCGAACGGGGAGCCCGCAGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCCGCCTACCATGATCGCGTCGACGACGTCTCCACGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGACGGCGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCGCACGCCCGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCGCCGTTGAAACATGTTCTCGGTCGTTCGCTAGGCAGGTTTCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

208

Amino Acids

23.44

Weight (kDa)

11.27

Isoelectric Point (pI)

70.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
AatII GACGTC 1 cut(s) 246
Acc36I ACCTGC 2 cut(s) 550, 574
AccI GTMKAC 2 cut(s) 123, 237
AccII CGCG 1 cut(s) 234
AccIII TCCGGA 1 cut(s) 364
AclWI GGATC 3 cut(s) 55, 68, 568
AcoI YGGCCR 2 cut(s) 149, 274
AcyI GRCGYC 1 cut(s) 243
AfiI CCNNNNNNNGG 5 cut(s) 57, 177, 272, 371, 583
AflIII ACRYGT 2 cut(s) 118, 536
AgsI TTSAA 4 cut(s) 144, 331, 392, 533
AjnI CCWGG 1 cut(s) 176
AleI CACNNNNGTG 1 cut(s) 415
AluBI AGCT 1 cut(s) 75
AluI AGCT 1 cut(s) 75
Alw21I GWGCWC 2 cut(s) 50, 185
Alw26I GTCTC 3 cut(s) 200, 250, 366
Alw44I GTGCAC 1 cut(s) 46
AlwI GGATC 3 cut(s) 55, 68, 568
Ama87I CYCGRG 1 cut(s) 429
Aor13HI TCCGGA 1 cut(s) 364
AoxI GGCC 2 cut(s) 149, 274
ApaLI GTGCAC 1 cut(s) 46
ApeKI GCWGC 1 cut(s) 167
AspA2I CCTAGG 1 cut(s) 485
AspLEI GCGC 5 cut(s) 85, 214, 405, 449, 501
AspS9I GGNCC 1 cut(s) 133
AsuC2I CCSGG 3 cut(s) 267, 430, 431
AsuHPI GGTGA 3 cut(s) 92, 348, 581
AvaI CYCGRG 1 cut(s) 429
AvaII GGWCC 1 cut(s) 133
AvrII CCTAGG 1 cut(s) 485
BaeGI GKGCMC 1 cut(s) 50
BamHI GGATCC 1 cut(s) 60
BanII GRGCYC 1 cut(s) 165
BbsI GAAGAC 1 cut(s) 338
Bbv12I GWGCWC 2 cut(s) 50, 185
BbvI GCAGC 1 cut(s) 179
BceAI ACGGC 6 cut(s) 155, 164, 225, 267, 385, 512
BcgI CGANNNNNNTGC 2 cut(s) 103, 137
BciT130I CCWGG 1 cut(s) 178
BcnI CCSGG 3 cut(s) 267, 430, 431
BcoDI GTCTC 3 cut(s) 200, 250, 366
BfaI CTAG 2 cut(s) 486, 555
BfuAI ACCTGC 2 cut(s) 550, 574
BglI GCCNNNNNGGC 1 cut(s) 209
BisI GCNGC 6 cut(s) 168, 219, 277, 280, 283, 507
BlnI CCTAGG 1 cut(s) 485
BlsI GCNGC 6 cut(s) 169, 220, 278, 281, 284, 508
Bme1390I CCNGG 4 cut(s) 178, 267, 430, 431
Bme18I GGWCC 1 cut(s) 133
BmeT110I CYCGRG 1 cut(s) 429
BmgT120I GGNCC 1 cut(s) 133
BmiI GGNNCC 2 cut(s) 62, 162
BmrFI CCNGG 4 cut(s) 178, 267, 430, 431
BmsI GCATC 1 cut(s) 180
BpiI GAAGAC 1 cut(s) 338
BpuMI CCSGG 3 cut(s) 267, 430, 431
BsaHI GRCGYC 1 cut(s) 243
BsaJI CCNNGG 5 cut(s) 129, 249, 398, 429, 485
BsaWI WCCGGW 1 cut(s) 364
BsaXI ACNNNNNCTCC 3 cut(s) 230, 260, 599
Bsc4I CCNNNNNNNGG 5 cut(s) 57, 177, 272, 371, 583
Bse118I RCCGGY 1 cut(s) 414
BseAI TCCGGA 1 cut(s) 364
BseBI CCWGG 1 cut(s) 178
BseDI CCNNGG 5 cut(s) 129, 249, 398, 429, 485
BseLI CCNNNNNNNGG 5 cut(s) 57, 177, 272, 371, 583
BseSI GKGCMC 1 cut(s) 50
BseX3I CGGCCG 1 cut(s) 149
BseXI GCAGC 1 cut(s) 179
Bsh1236I CGCG 1 cut(s) 234
Bsh1285I CGRYCG 3 cut(s) 40, 152, 548
BshFI GGCC 2 cut(s) 151, 276
BsiEI CGRYCG 3 cut(s) 40, 152, 548
BsiHKAI GWGCWC 2 cut(s) 50, 185
BsiHKCI CYCGRG 1 cut(s) 429
BsiSI CCGG 4 cut(s) 267, 365, 415, 430
BslI CCNNNNNNNGG 5 cut(s) 57, 177, 272, 371, 583
BsmAI GTCTC 3 cut(s) 200, 250, 366
BsmBI CGTCTC 3 cut(s) 200, 250, 366
BsnI GGCC 2 cut(s) 151, 276
BsoBI CYCGRG 1 cut(s) 429
Bsp1286I GDGCHC 3 cut(s) 50, 165, 185
Bsp13I TCCGGA 1 cut(s) 364
Bsp143I GATC 6 cut(s) 27, 60, 229, 353, 440, 573
BspANI GGCC 2 cut(s) 151, 276
BspEI TCCGGA 1 cut(s) 364
BspFNI CGCG 1 cut(s) 234
BspLI GGNNCC 2 cut(s) 62, 162
BspMI ACCTGC 2 cut(s) 550, 574
BspPI GGATC 3 cut(s) 55, 68, 568
BsrFI RCCGGY 1 cut(s) 414
BssAI RCCGGY 1 cut(s) 414
BssECI CCNNGG 5 cut(s) 129, 249, 398, 429, 485
BssMI GATC 6 cut(s) 27, 60, 229, 353, 440, 573
BssNI GRCGYC 1 cut(s) 243
BssT1I CCWWGG 3 cut(s) 129, 398, 485
Bst2UI CCWGG 1 cut(s) 178
Bst4CI ACNGT 1 cut(s) 360
BstACI GRCGYC 1 cut(s) 243
BstC8I GCNNGC 6 cut(s) 165, 185, 201, 216, 426, 451
BstDSI CCRYGG 1 cut(s) 249
BstENI CCTNNNNNAGG 1 cut(s) 581
BstFNI CGCG 1 cut(s) 234
BstHHI GCGC 5 cut(s) 85, 214, 405, 449, 501
BstKTI GATC 6 cut(s) 30, 63, 232, 356, 443, 576
BstMAI GTCTC 3 cut(s) 200, 250, 366
BstMBI GATC 6 cut(s) 27, 60, 229, 353, 440, 573
BstMCI CGRYCG 3 cut(s) 40, 152, 548
BstMWI GCNNNNNNNGC 6 cut(s) 209, 218, 276, 282, 378, 411
BstNI CCWGG 1 cut(s) 178
BstNSI RCATGY 3 cut(s) 122, 218, 540
BstSCI CCNGG 4 cut(s) 176, 265, 428, 429
BstSLI GKGCMC 1 cut(s) 50
BstUI CGCG 1 cut(s) 234
BstV1I GCAGC 1 cut(s) 179
BstV2I GAAGAC 1 cut(s) 338
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
BstZI CGGCCG 1 cut(s) 149
BsuRI GGCC 2 cut(s) 151, 276
BtgI CCRYGG 1 cut(s) 249
BveI ACCTGC 2 cut(s) 550, 574
Cac8I GCNNGC 6 cut(s) 165, 185, 201, 216, 426, 451
CfoI GCGC 5 cut(s) 85, 214, 405, 449, 501
Cfr10I RCCGGY 1 cut(s) 414
Cfr13I GGNCC 1 cut(s) 133
Cfr9I CCCGGG 1 cut(s) 429
CseI GACGC 1 cut(s) 223
CviAII CATG 4 cut(s) 119, 215, 227, 537
CviJI RGCY 9 cut(s) 75, 151, 163, 170, 265, 270, 276, 293, 506
CviKI_1 RGCY 9 cut(s) 75, 151, 163, 170, 265, 270, 276, 293, 506
DpnI GATC 6 cut(s) 29, 62, 231, 355, 442, 575
DpnII GATC 6 cut(s) 27, 60, 229, 353, 440, 573
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 2 cut(s) 149, 274
EagI CGGCCG 1 cut(s) 149
EciI GGCGGA 1 cut(s) 508
EclXI CGGCCG 1 cut(s) 149
Eco130I CCWWGG 3 cut(s) 129, 398, 485
Eco24I GRGCYC 1 cut(s) 165
Eco32I GATATC 1 cut(s) 300
Eco47I GGWCC 1 cut(s) 133
Eco52I CGGCCG 1 cut(s) 149
Eco88I CYCGRG 1 cut(s) 429
EcoNI CCTNNNNNAGG 1 cut(s) 581
EcoRII CCWGG 1 cut(s) 176
EcoRV GATATC 1 cut(s) 300
EcoT14I CCWWGG 3 cut(s) 129, 398, 485
EcoT38I GRGCYC 1 cut(s) 165
ErhI CCWWGG 3 cut(s) 129, 398, 485
Esp3I CGTCTC 3 cut(s) 200, 250, 366
FaeI CATG 4 cut(s) 122, 218, 230, 540
FaiI YATR 6 cut(s) 120, 216, 228, 256, 326, 538
FatI CATG 4 cut(s) 118, 214, 226, 536
FauI CCCGC 6 cut(s) 59, 72, 172, 355, 365, 532
FblI GTMKAC 2 cut(s) 123, 237
Fnu4HI GCNGC 6 cut(s) 168, 219, 277, 280, 283, 507
FriOI GRGCYC 1 cut(s) 165
Fsp4HI GCNGC 6 cut(s) 168, 219, 277, 280, 283, 507
FspBI CTAG 2 cut(s) 486, 555
GlaI GCGC 5 cut(s) 84, 213, 404, 448, 500
GluI GCNGC 6 cut(s) 168, 219, 277, 280, 283, 507
HaeIII GGCC 2 cut(s) 151, 276
HapII CCGG 4 cut(s) 267, 365, 415, 430
HgaI GACGC 1 cut(s) 223
HhaI GCGC 5 cut(s) 85, 214, 405, 449, 501
Hin1I GRCGYC 1 cut(s) 243
Hin1II CATG 4 cut(s) 122, 218, 230, 540
Hin6I GCGC 5 cut(s) 83, 212, 403, 447, 499
HinP1I GCGC 5 cut(s) 83, 212, 403, 447, 499
HincII GTYRAC 3 cut(s) 108, 124, 238
HindII GTYRAC 3 cut(s) 108, 124, 238
HinfI GANTC 3 cut(s) 109, 125, 313
HpaII CCGG 4 cut(s) 267, 365, 415, 430
HphI GGTGA 3 cut(s) 92, 348, 581
Hpy166II GTNNAC 5 cut(s) 48, 108, 124, 238, 589
Hpy188III TCNNGA 3 cut(s) 22, 144, 365
Hpy8I GTNNAC 5 cut(s) 48, 108, 124, 238, 589
Hpy99I CGWCG 4 cut(s) 239, 242, 245, 340
HpyAV CCTTC 2 cut(s) 28, 587
HpyCH4III ACNGT 1 cut(s) 360
HpyCH4IV ACGT 1 cut(s) 243
HpyCH4V TGCA 2 cut(s) 48, 463
HpyF10VI GCNNNNNNNGC 6 cut(s) 209, 218, 276, 282, 378, 411
HpySE526I ACGT 1 cut(s) 243
Hsp92I GRCGYC 1 cut(s) 243
Hsp92II CATG 4 cut(s) 122, 218, 230, 540
HspAI GCGC 5 cut(s) 83, 212, 403, 447, 499
Kpn2I TCCGGA 1 cut(s) 364
Kzo9I GATC 6 cut(s) 27, 60, 229, 353, 440, 573
LmnI GCTCC 2 cut(s) 160, 180
LpnPI CCDG 9 cut(s) 163, 190, 280, 303, 378, 428, 443, 545, 569
Lsp1109I GCAGC 1 cut(s) 179
LweI GCATC 1 cut(s) 180
MaeI CTAG 2 cut(s) 486, 555
MaeII ACGT 1 cut(s) 243
MaeIII GTNAC 2 cut(s) 172, 605
MalI GATC 6 cut(s) 29, 62, 231, 355, 442, 575
MboI GATC 6 cut(s) 27, 60, 229, 353, 440, 573
MboII GAAGA 2 cut(s) 37, 343
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 3 cut(s) 50, 165, 185
MluCI AATT 1 cut(s) 406
MlyI GAGTC 3 cut(s) 103, 119, 322
MnlI CCTC 3 cut(s) 427, 492, 526
MroI TCCGGA 1 cut(s) 364
MseI TTAA 1 cut(s) 96
MslI CAYNNNNRTG 3 cut(s) 188, 415, 458
MspI CCGG 4 cut(s) 267, 365, 415, 430
MspR9I CCNGG 4 cut(s) 178, 267, 430, 431
MvaI CCWGG 1 cut(s) 178
MvnI CGCG 1 cut(s) 234
MwoI GCNNNNNNNGC 6 cut(s) 209, 218, 276, 282, 378, 411
NciI CCSGG 3 cut(s) 267, 430, 431
NdeII GATC 6 cut(s) 27, 60, 229, 353, 440, 573
NlaIII CATG 4 cut(s) 122, 218, 230, 540
NlaIV GGNNCC 2 cut(s) 62, 162
NmeAIII GCCGAG 3 cut(s) 229, 319, 334
NspI RCATGY 3 cut(s) 122, 218, 540
OliI CACNNNNGTG 1 cut(s) 415
PaeI GCATGC 1 cut(s) 218
PciI ACATGT 2 cut(s) 118, 536
PcsI WCGNNNNNNNCGW 1 cut(s) 191
PflFI GACNNNGTC 1 cut(s) 242
PkrI GCNGC 6 cut(s) 169, 220, 278, 281, 284, 508
PleI GAGTC 3 cut(s) 103, 119, 321
PpsI GAGTC 3 cut(s) 103, 119, 321
PscI ACATGT 2 cut(s) 118, 536
Psp6I CCWGG 1 cut(s) 176
PspGI CCWGG 1 cut(s) 176
PspN4I GGNNCC 2 cut(s) 62, 162
PspPI GGNCC 1 cut(s) 133
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 1 cut(s) 242
RseI CAYNNNNRTG 3 cut(s) 188, 415, 458
SalI GTCGAC 2 cut(s) 122, 236
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 6 cut(s) 168, 219, 277, 280, 283, 507
Sau3AI GATC 6 cut(s) 27, 60, 229, 353, 440, 573
Sau96I GGNCC 1 cut(s) 133
SchI GAGTC 3 cut(s) 103, 119, 322
ScrFI CCNGG 4 cut(s) 178, 267, 430, 431
SduI GDGCHC 3 cut(s) 50, 165, 185
SetI ASST 7 cut(s) 36, 77, 246, 564, 588, 594, 604
SfaNI GCATC 1 cut(s) 180
SgrAI CRCCGGYG 1 cut(s) 414
SgrDI CGTCGACG 1 cut(s) 236
SinI GGWCC 1 cut(s) 133
SmaI CCCGGG 1 cut(s) 431
SmiMI CAYNNNNRTG 3 cut(s) 188, 415, 458
SphI GCATGC 1 cut(s) 218
Sse9I AATT 1 cut(s) 406
SspMI CTAG 2 cut(s) 486, 555
StyD4I CCNGG 4 cut(s) 176, 265, 428, 429
StyI CCWWGG 3 cut(s) 129, 398, 485
TaaI ACNGT 1 cut(s) 360
TaiI ACGT 1 cut(s) 246
TaqI TCGA 6 cut(s) 12, 23, 123, 237, 439, 566
TaqII GACCGA 2 cut(s) 26, 534
TasI AATT 1 cut(s) 406
TauI GCSGC 5 cut(s) 221, 279, 282, 285, 509
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TseI GCWGC 1 cut(s) 167
TspDTI ATGAA 1 cut(s) 376
TspGWI ACGGA 3 cut(s) 125, 292, 610
TspMI CCCGGG 1 cut(s) 429
Tth111I GACNNNGTC 1 cut(s) 242
VneI GTGCAC 1 cut(s) 46
VpaK11BI GGWCC 1 cut(s) 133
XagI CCTNNNNNAGG 1 cut(s) 581
XceI RCATGY 3 cut(s) 122, 218, 540
XmaI CCCGGG 1 cut(s) 429
XmaJI CCTAGG 1 cut(s) 485
XmiI GTMKAC 2 cut(s) 123, 237
XspI CTAG 2 cut(s) 486, 555
ZraI GACGTC 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.