Rroxscaffold_68G00447020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000068
OG0000037
Physical Location & Seq
Forward (+)
34291 .. 43118
8828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_68G00447020.1

Sequence Viewer

Length: 1365 bp
ATGCTCACACTCGAACCCTTCTCGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCGACTCCTTGGTCCGTGTTTCAAGACGGCCGAATGGGGAGCGCGCAGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCGGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATCGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCTTCCAGGGGACTTGTTCCCGTCCGCCTCTCGAGGACGCTTCTCCGGACTACAATTCGGACGCCTTACGACGCCGATTCTCAAGCCGGGCTATTCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTACGACGAAACCACCCGCACGATCACCGTCTCGGGACGGCGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCCGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCGCAAGACCCTCCGCCCCCCGGCGTTGAAACATGTTCTCGGGTCGTTCTGCTAGGCAGATATTTGAATGATGCGTCGCCAGCACAAAGGCTGTGCGATCCGTCGAGTTATCATGAATCATCAATACAACGGGCAGAGCCCGCACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCCTTTGACAACGCTGGCACCGCGTAGGGAGACCCTGCAACGAGCACAGCAGTCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAGGCATGCCAATGCAAGGGGCACAGGCACTACTACGATGTCCTTCCCCTAACCGAATGGCTCAGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

454

Amino Acids

50.15

Weight (kDa)

10.58

Isoelectric Point (pI)

61.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
AatII GACGTC 2 cut(s) 246, 1171
AccB1I GGYRCC 3 cut(s) 594, 1096, 1346
AccI GTMKAC 3 cut(s) 123, 237, 1337
AccII CGCG 5 cut(s) 165, 234, 363, 442, 1102
AccIII TCCGGA 1 cut(s) 643
AclWI GGATC 4 cut(s) 55, 68, 989, 1071
AcoI YGGCCR 2 cut(s) 149, 275
AcsI RAATTY 1 cut(s) 490
AcyI GRCGYC 5 cut(s) 243, 595, 660, 670, 1168
AfaI GTAC 3 cut(s) 446, 818, 1136
AflIII ACRYGT 3 cut(s) 118, 929, 1137
AgsI TTSAA 7 cut(s) 144, 395, 418, 784, 926, 964, 1160
AjnI CCWGG 4 cut(s) 176, 603, 1069, 1230
AleI CACNNNNGTG 1 cut(s) 807
AluBI AGCT 1 cut(s) 75
AluI AGCT 1 cut(s) 75
Alw21I GWGCWC 4 cut(s) 50, 185, 1126, 1253
Alw26I GTCTC 6 cut(s) 200, 250, 467, 758, 1103, 1208
Alw44I GTGCAC 2 cut(s) 46, 1249
AlwI GGATC 4 cut(s) 55, 68, 989, 1071
Ama87I CYCGRG 5 cut(s) 307, 629, 755, 822, 936
Aor13HI TCCGGA 1 cut(s) 643
AoxI GGCC 3 cut(s) 149, 275, 364
ApaLI GTGCAC 2 cut(s) 46, 1249
ApeKI GCWGC 3 cut(s) 167, 218, 510
ApoI RAATTY 1 cut(s) 490
AspA2I CCTAGG 1 cut(s) 878
AspS9I GGNCC 5 cut(s) 133, 298, 322, 365, 562
AsuC2I CCSGG 6 cut(s) 268, 566, 686, 823, 824, 918
AsuHPI GGTGA 3 cut(s) 92, 575, 740
AvaI CYCGRG 5 cut(s) 307, 629, 755, 822, 936
AvaII GGWCC 4 cut(s) 133, 298, 322, 562
AvrII CCTAGG 1 cut(s) 878
BaeGI GKGCMC 4 cut(s) 50, 571, 1253, 1282
BamHI GGATCC 1 cut(s) 60
BanI GGYRCC 3 cut(s) 594, 1096, 1346
BanII GRGCYC 2 cut(s) 581, 1038
BauI CACGAG 1 cut(s) 546
Bbv12I GWGCWC 4 cut(s) 50, 185, 1126, 1253
BbvI GCAGC 3 cut(s) 179, 205, 497
BccI CCATC 1 cut(s) 378
BceAI ACGGC 5 cut(s) 155, 164, 225, 691, 777
BcgI CGANNNNNNTGC 4 cut(s) 103, 137, 1113, 1147
BciT130I CCWGG 4 cut(s) 178, 605, 1071, 1232
BciVI GTATCC 1 cut(s) 1219
BcnI CCSGG 6 cut(s) 268, 566, 686, 823, 824, 918
BcoDI GTCTC 6 cut(s) 200, 250, 467, 758, 1103, 1208
BfaI CTAG 3 cut(s) 879, 950, 1143
BfoI RGCGCY 2 cut(s) 545, 598
BfuI GTATCC 1 cut(s) 1219
BglI GCCNNNNNGGC 1 cut(s) 209
BisI GCNGC 7 cut(s) 168, 219, 278, 281, 284, 364, 511
BlnI CCTAGG 1 cut(s) 878
BlsI GCNGC 7 cut(s) 169, 220, 279, 282, 285, 365, 512
Bme18I GGWCC 4 cut(s) 133, 298, 322, 562
BmeT110I CYCGRG 5 cut(s) 307, 629, 755, 822, 936
BmgT120I GGNCC 5 cut(s) 133, 298, 322, 365, 562
BmiI GGNNCC 7 cut(s) 62, 367, 563, 596, 1098, 1237, 1348
BmsI GCATC 3 cut(s) 180, 367, 958
BoxI GACNNNNGTC 1 cut(s) 560
Bpu10I CCTNAGC 1 cut(s) 1320
BpuEI CTTGAG 1 cut(s) 664
BpuMI CCSGG 6 cut(s) 268, 566, 686, 823, 824, 918
BsaHI GRCGYC 5 cut(s) 243, 595, 660, 670, 1168
BsaI GGTCTC 2 cut(s) 467, 1103
BsaWI WCCGGW 2 cut(s) 643, 694
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bse118I RCCGGY 2 cut(s) 324, 806
Bse1I ACTGG 1 cut(s) 1061
BseAI TCCGGA 1 cut(s) 643
BseBI CCWGG 4 cut(s) 178, 605, 1071, 1232
BseGI GGATG 2 cut(s) 343, 370
BseMII CTCAG 1 cut(s) 1334
BseNI ACTGG 1 cut(s) 1061
BsePI GCGCGC 1 cut(s) 163
BseSI GKGCMC 4 cut(s) 50, 571, 1253, 1282
BseX3I CGGCCG 1 cut(s) 149
BseXI GCAGC 3 cut(s) 179, 205, 497
Bsh1236I CGCG 5 cut(s) 165, 234, 363, 442, 1102
Bsh1285I CGRYCG 4 cut(s) 40, 152, 351, 505
BshFI GGCC 3 cut(s) 151, 277, 366
BshNI GGYRCC 3 cut(s) 594, 1096, 1346
BsiEI CGRYCG 4 cut(s) 40, 152, 351, 505
BsiHKAI GWGCWC 4 cut(s) 50, 185, 1126, 1253
BsiHKCI CYCGRG 5 cut(s) 307, 629, 755, 822, 936
BsiSI CCGG 9 cut(s) 267, 325, 565, 644, 685, 695, 807, 823, 918
BslFI GGGAC 2 cut(s) 622, 772
BsmAI GTCTC 6 cut(s) 200, 250, 467, 758, 1103, 1208
BsmBI CGTCTC 3 cut(s) 200, 250, 758
BsmFI GGGAC 2 cut(s) 622, 772
BsmI GAATGC 2 cut(s) 513, 1077
BsnI GGCC 3 cut(s) 151, 277, 366
Bso31I GGTCTC 2 cut(s) 467, 1103
BsoBI CYCGRG 5 cut(s) 307, 629, 755, 822, 936
Bsp1286I GDGCHC 8 cut(s) 50, 185, 571, 581, 1038, 1126, 1253, 1282
Bsp13I TCCGGA 1 cut(s) 643
Bsp143I GATC 8 cut(s) 27, 60, 229, 502, 745, 833, 994, 1063
BspANI GGCC 3 cut(s) 151, 277, 366
BspCNI CTCAG 1 cut(s) 1333
BspEI TCCGGA 1 cut(s) 643
BspFNI CGCG 5 cut(s) 165, 234, 363, 442, 1102
BspHI TCATGA 1 cut(s) 1009
BspLI GGNNCC 7 cut(s) 62, 367, 563, 596, 1098, 1237, 1348
BspPI GGATC 4 cut(s) 55, 68, 989, 1071
BspT107I GGYRCC 3 cut(s) 594, 1096, 1346
BspTNI GGTCTC 2 cut(s) 467, 1103
BsrFI RCCGGY 2 cut(s) 324, 806
BsrI ACTGG 1 cut(s) 1061
BssAI RCCGGY 2 cut(s) 324, 806
BssHII GCGCGC 1 cut(s) 163
BssMI GATC 8 cut(s) 27, 60, 229, 502, 745, 833, 994, 1063
BssNI GRCGYC 5 cut(s) 243, 595, 660, 670, 1168
BssSI CACGAG 1 cut(s) 546
BssT1I CCWWGG 4 cut(s) 129, 481, 790, 878
Bst2BI CACGAG 1 cut(s) 546
Bst2UI CCWGG 4 cut(s) 178, 605, 1071, 1232
Bst4CI ACNGT 4 cut(s) 298, 337, 752, 1240
BstACI GRCGYC 5 cut(s) 243, 595, 660, 670, 1168
BstDEI CTNAG 2 cut(s) 713, 1320
BstDSI CCRYGG 1 cut(s) 249
BstF5I GGATG 2 cut(s) 343, 370
BstFNI CGCG 5 cut(s) 165, 234, 363, 442, 1102
BstH2I RGCGCY 2 cut(s) 545, 598
BstKTI GATC 8 cut(s) 30, 63, 232, 505, 748, 836, 997, 1066
BstMAI GTCTC 6 cut(s) 200, 250, 467, 758, 1103, 1208
BstMBI GATC 8 cut(s) 27, 60, 229, 502, 745, 833, 994, 1063
BstMCI CGRYCG 4 cut(s) 40, 152, 351, 505
BstNI CCWGG 4 cut(s) 178, 605, 1071, 1232
BstNSI RCATGY 5 cut(s) 122, 218, 933, 1141, 1267
BstPAI GACNNNNGTC 1 cut(s) 560
BstSLI GKGCMC 4 cut(s) 50, 571, 1253, 1282
BstUI CGCG 5 cut(s) 165, 234, 363, 442, 1102
BstV1I GCAGC 3 cut(s) 179, 205, 497
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
BstZI CGGCCG 1 cut(s) 149
BsuI GTATCC 1 cut(s) 1219
BsuRI GGCC 3 cut(s) 151, 277, 366
BtgI CCRYGG 1 cut(s) 249
BtgZI GCGATG 1 cut(s) 344
BtsCI GGATG 2 cut(s) 343, 370
CciI TCATGA 1 cut(s) 1009
Cfr10I RCCGGY 2 cut(s) 324, 806
Cfr13I GGNCC 5 cut(s) 133, 298, 322, 365, 562
Cfr9I CCCGGG 1 cut(s) 822
CpoI CGGWCCG 1 cut(s) 322
CseI GACGC 5 cut(s) 223, 644, 668, 678, 960
CsiI ACCWGGT 1 cut(s) 1069
Csp6I GTAC 3 cut(s) 445, 817, 1135
CspI CGGWCCG 1 cut(s) 322
CviAII CATG 7 cut(s) 119, 215, 227, 930, 1010, 1138, 1264
CviQI GTAC 3 cut(s) 445, 817, 1135
DdeI CTNAG 2 cut(s) 713, 1320
DinI GGCGCC 1 cut(s) 596
DpnI GATC 8 cut(s) 29, 62, 231, 504, 747, 835, 996, 1065
DpnII GATC 8 cut(s) 27, 60, 229, 502, 745, 833, 994, 1063
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 2 cut(s) 149, 275
EagI CGGCCG 1 cut(s) 149
EciI GGCGGA 3 cut(s) 335, 612, 900
EclXI CGGCCG 1 cut(s) 149
Eco130I CCWWGG 4 cut(s) 129, 481, 790, 878
Eco24I GRGCYC 2 cut(s) 581, 1038
Eco31I GGTCTC 2 cut(s) 467, 1103
Eco47I GGWCC 4 cut(s) 133, 298, 322, 562
Eco52I CGGCCG 1 cut(s) 149
Eco88I CYCGRG 5 cut(s) 307, 629, 755, 822, 936
EcoRII CCWGG 4 cut(s) 176, 603, 1069, 1230
EcoT14I CCWWGG 4 cut(s) 129, 481, 790, 878
EcoT38I GRGCYC 2 cut(s) 581, 1038
EgeI GGCGCC 1 cut(s) 596
EheI GGCGCC 1 cut(s) 596
ErhI CCWWGG 4 cut(s) 129, 481, 790, 878
Esp3I CGTCTC 3 cut(s) 200, 250, 758
FaeI CATG 7 cut(s) 122, 218, 230, 933, 1013, 1141, 1267
FaqI GGGAC 2 cut(s) 622, 772
FatI CATG 7 cut(s) 118, 214, 226, 929, 1009, 1137, 1263
FauI CCCGC 5 cut(s) 59, 72, 747, 757, 1045
FauNDI CATATG 1 cut(s) 1048
FblI GTMKAC 3 cut(s) 123, 237, 1337
Fnu4HI GCNGC 7 cut(s) 168, 219, 278, 281, 284, 364, 511
FokI GGATG 2 cut(s) 330, 357
FriOI GRGCYC 2 cut(s) 581, 1038
Fsp4HI GCNGC 7 cut(s) 168, 219, 278, 281, 284, 364, 511
FspBI CTAG 3 cut(s) 879, 950, 1143
GluI GCNGC 7 cut(s) 168, 219, 278, 281, 284, 364, 511
HaeII RGCGCY 2 cut(s) 545, 598
HaeIII GGCC 3 cut(s) 151, 277, 366
HapII CCGG 9 cut(s) 267, 325, 565, 644, 685, 695, 807, 823, 918
HgaI GACGC 5 cut(s) 223, 644, 668, 678, 960
Hin1I GRCGYC 5 cut(s) 243, 595, 660, 670, 1168
Hin1II CATG 7 cut(s) 122, 218, 230, 933, 1013, 1141, 1267
HincII GTYRAC 4 cut(s) 108, 124, 238, 1338
HindII GTYRAC 4 cut(s) 108, 124, 238, 1338
HinfI GANTC 8 cut(s) 109, 125, 310, 407, 530, 675, 719, 1013
HpaII CCGG 9 cut(s) 267, 325, 565, 644, 685, 695, 807, 823, 918
HphI GGTGA 3 cut(s) 92, 575, 740
Hpy166II GTNNAC 7 cut(s) 48, 108, 124, 238, 301, 1251, 1338
Hpy188I TCNGA 3 cut(s) 348, 658, 1213
Hpy188III TCNNGA 7 cut(s) 22, 144, 384, 629, 644, 757, 1010
Hpy8I GTNNAC 7 cut(s) 48, 108, 124, 238, 301, 1251, 1338
Hpy99I CGWCG 8 cut(s) 239, 242, 245, 672, 732, 976, 1003, 1244
HpyAV CCTTC 4 cut(s) 28, 610, 1311, 1320
HpyCH4III ACNGT 4 cut(s) 298, 337, 752, 1240
HpyCH4IV ACGT 2 cut(s) 243, 1168
HpyCH4V TGCA 7 cut(s) 48, 513, 856, 1117, 1179, 1251, 1273
HpyF3I CTNAG 2 cut(s) 713, 1320
HpySE526I ACGT 2 cut(s) 243, 1168
Hsp92I GRCGYC 5 cut(s) 243, 595, 660, 670, 1168
Hsp92II CATG 7 cut(s) 122, 218, 230, 933, 1013, 1141, 1267
KasI GGCGCC 1 cut(s) 594
Kpn2I TCCGGA 1 cut(s) 643
Kzo9I GATC 8 cut(s) 27, 60, 229, 502, 745, 833, 994, 1063
LmnI GCTCC 2 cut(s) 160, 180
Lsp1109I GCAGC 3 cut(s) 179, 205, 497
LweI GCATC 3 cut(s) 180, 367, 958
MabI ACCWGGT 1 cut(s) 1069
MaeI CTAG 3 cut(s) 879, 950, 1143
MaeII ACGT 2 cut(s) 243, 1168
MaeIII GTNAC 4 cut(s) 172, 292, 331, 708
MalI GATC 8 cut(s) 29, 62, 231, 504, 747, 835, 996, 1065
MboI GATC 8 cut(s) 27, 60, 229, 502, 745, 833, 994, 1063
MboII GAAGA 1 cut(s) 37
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 8 cut(s) 50, 185, 571, 581, 1038, 1126, 1253, 1282
MluCI AATT 5 cut(s) 389, 490, 652, 798, 1161
Mly113I GGCGCC 1 cut(s) 595
MlyI GAGTC 5 cut(s) 103, 119, 319, 401, 524
MmeI TCCRAC 1 cut(s) 371
MroI TCCGGA 1 cut(s) 643
MseI TTAA 1 cut(s) 96
MslI CAYNNNNRTG 4 cut(s) 188, 807, 851, 1268
MspI CCGG 9 cut(s) 267, 325, 565, 644, 685, 695, 807, 823, 918
Mva1269I GAATGC 2 cut(s) 513, 1077
MvaI CCWGG 4 cut(s) 178, 605, 1071, 1232
MvnI CGCG 5 cut(s) 165, 234, 363, 442, 1102
NarI GGCGCC 1 cut(s) 595
NciI CCSGG 6 cut(s) 268, 566, 686, 823, 824, 918
NdeI CATATG 1 cut(s) 1048
NdeII GATC 8 cut(s) 27, 60, 229, 502, 745, 833, 994, 1063
NlaIII CATG 7 cut(s) 122, 218, 230, 933, 1013, 1141, 1267
NlaIV GGNNCC 7 cut(s) 62, 367, 563, 596, 1098, 1237, 1348
NmeAIII GCCGAG 1 cut(s) 229
NmuCI GTSAC 1 cut(s) 331
NspI RCATGY 5 cut(s) 122, 218, 933, 1141, 1267
OliI CACNNNNGTG 1 cut(s) 807
PaeI GCATGC 2 cut(s) 218, 1267
PaeR7I CTCGAG 1 cut(s) 629
PagI TCATGA 1 cut(s) 1009
PauI GCGCGC 1 cut(s) 163
PciI ACATGT 3 cut(s) 118, 929, 1137
PcsI WCGNNNNNNNCGW 1 cut(s) 191
PctI GAATGC 2 cut(s) 513, 1077
PfeI GAWTC 3 cut(s) 675, 719, 1013
PflFI GACNNNGTC 1 cut(s) 242
PkrI GCNGC 7 cut(s) 169, 220, 279, 282, 285, 365, 512
Ple19I CGATCG 1 cut(s) 505
PleI GAGTC 5 cut(s) 103, 119, 318, 401, 524
PluTI GGCGCC 1 cut(s) 598
PpsI GAGTC 5 cut(s) 103, 119, 318, 401, 524
PscI ACATGT 3 cut(s) 118, 929, 1137
PshAI GACNNNNGTC 1 cut(s) 560
Psp6I CCWGG 4 cut(s) 176, 603, 1069, 1230
PspGI CCWGG 4 cut(s) 176, 603, 1069, 1230
PspN4I GGNNCC 7 cut(s) 62, 367, 563, 596, 1098, 1237, 1348
PspPI GGNCC 5 cut(s) 133, 298, 322, 365, 562
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 1 cut(s) 242
PteI GCGCGC 1 cut(s) 163
PvuI CGATCG 1 cut(s) 505
RsaI GTAC 3 cut(s) 446, 818, 1136
RsaNI GTAC 3 cut(s) 445, 817, 1135
RseI CAYNNNNRTG 4 cut(s) 188, 807, 851, 1268
Rsr2I CGGWCCG 1 cut(s) 322
RsrII CGGWCCG 1 cut(s) 322
SalI GTCGAC 3 cut(s) 122, 236, 1336
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 7 cut(s) 168, 219, 278, 281, 284, 364, 511
Sau3AI GATC 8 cut(s) 27, 60, 229, 502, 745, 833, 994, 1063
Sau96I GGNCC 5 cut(s) 133, 298, 322, 365, 562
SchI GAGTC 5 cut(s) 103, 119, 319, 401, 524
SduI GDGCHC 8 cut(s) 50, 185, 571, 581, 1038, 1126, 1253, 1282
SetI ASST 7 cut(s) 36, 77, 246, 1075, 1171, 1233, 1250
SexAI ACCWGGT 1 cut(s) 1069
SfaNI GCATC 3 cut(s) 180, 367, 958
SfoI GGCGCC 1 cut(s) 596
Sfr274I CTCGAG 1 cut(s) 629
SgrAI CRCCGGYG 1 cut(s) 806
SgrDI CGTCGACG 1 cut(s) 236
SinI GGWCC 4 cut(s) 133, 298, 322, 562
SlaI CTCGAG 1 cut(s) 629
SmaI CCCGGG 1 cut(s) 824
SmiMI CAYNNNNRTG 4 cut(s) 188, 807, 851, 1268
SmlI CTYRAG 2 cut(s) 629, 679
SmoI CTYRAG 2 cut(s) 629, 679
SphI GCATGC 2 cut(s) 218, 1267
Sse9I AATT 5 cut(s) 389, 490, 652, 798, 1161
SspDI GGCGCC 1 cut(s) 594
SspMI CTAG 3 cut(s) 879, 950, 1143
StyI CCWWGG 4 cut(s) 129, 481, 790, 878
TaaI ACNGT 4 cut(s) 298, 337, 752, 1240
TaiI ACGT 2 cut(s) 246, 1171
TaqI TCGA 9 cut(s) 12, 23, 123, 237, 313, 630, 832, 1001, 1337
TaqII GACCGA 3 cut(s) 26, 365, 449
TasI AATT 5 cut(s) 389, 490, 652, 798, 1161
TauI GCSGC 4 cut(s) 280, 283, 286, 366
TfiI GAWTC 3 cut(s) 675, 719, 1013
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TseFI GTSAC 1 cut(s) 331
TseI GCWGC 3 cut(s) 167, 218, 510
Tsp45I GTSAC 1 cut(s) 331
TspDTI ATGAA 3 cut(s) 418, 768, 1026
TspGWI ACGGA 4 cut(s) 125, 280, 502, 987
TspMI CCCGGG 1 cut(s) 822
Tth111I GACNNNGTC 1 cut(s) 242
VneI GTGCAC 2 cut(s) 46, 1249
VpaK11BI GGWCC 4 cut(s) 133, 298, 322, 562
XapI RAATTY 1 cut(s) 490
XceI RCATGY 5 cut(s) 122, 218, 933, 1141, 1267
XhoI CTCGAG 1 cut(s) 629
XmaI CCCGGG 1 cut(s) 822
XmaJI CCTAGG 1 cut(s) 878
XmiI GTMKAC 3 cut(s) 123, 237, 1337
XspI CTAG 3 cut(s) 879, 950, 1143
ZraI GACGTC 2 cut(s) 244, 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.