Rroxscaffold_14G00442000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000014
OG0000037
Physical Location & Seq
Forward (+)
62336 .. 64528
2193 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_14G00442000.1

Sequence Viewer

Length: 1032 bp
ATGCTCACACTCGAACCCTTCTCGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCGACTCCTTGGTCCGTGTTTCAAGACGGCCGAACGGGGAGCCCGCAGCCGTTACCAGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCCGCCTACCATGATCGCGTCGACGACGTCTCCACGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCCCTCGGACGGAATTTACCGCCCGATCGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGTCCGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCTTCCAGGGGACTTGTTCCCGTCCGCCTCTCGAGGACGCTTCTCCGTACTACAATTCGGACGCCTTACGACGCCGCATTCTCAAGCCGGGCTATTCCCGTTCGCTCGCCGTTACTAAGGGAATCCTTACGTGCCCTCGCCCAATGGCTTCGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGACGGCGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCGCACGCCCGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCCCGCCGTTGAAACATGTTCTCGGTCGTTCGCTAGGCAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCCGATCCCCGGTCGGCATCGTTTATGGTCGAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

343

Amino Acids

38.36

Weight (kDa)

12.0

Isoelectric Point (pI)

83.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 954
AasI GACNNNNNNGTC 1 cut(s) 131
AatII GACGTC 1 cut(s) 245
Acc36I ACCTGC 1 cut(s) 954
AccB1I GGYRCC 2 cut(s) 446, 966
AccI GTMKAC 2 cut(s) 123, 236
AccII CGCG 1 cut(s) 233
AccIII TCCGGA 1 cut(s) 766
AclWI GGATC 3 cut(s) 55, 68, 993
AcoI YGGCCR 2 cut(s) 149, 273
AcsI RAATTY 1 cut(s) 345
AcyI GRCGYC 4 cut(s) 242, 447, 512, 522
AfaI GTAC 1 cut(s) 499
AfiI CCNNNNNNNGG 9 cut(s) 57, 271, 341, 361, 456, 457, 458, 773, 1003
AflIII ACRYGT 2 cut(s) 118, 940
AgsI TTSAA 5 cut(s) 144, 618, 733, 794, 937
AjnI CCWGG 1 cut(s) 455
AleI CACNNNNGTG 1 cut(s) 817
AluBI AGCT 1 cut(s) 75
AluI AGCT 1 cut(s) 75
Alw21I GWGCWC 2 cut(s) 50, 184
Alw26I GTCTC 4 cut(s) 199, 249, 768, 1020
Alw44I GTGCAC 1 cut(s) 46
AlwI GGATC 3 cut(s) 55, 68, 993
Ama87I CYCGRG 3 cut(s) 305, 481, 831
Aor13HI TCCGGA 1 cut(s) 766
AoxI GGCC 2 cut(s) 149, 273
ApaLI GTGCAC 1 cut(s) 46
ApeKI GCWGC 2 cut(s) 167, 365
ApoI RAATTY 1 cut(s) 345
AspA2I CCTAGG 1 cut(s) 887
AspLEI GCGC 8 cut(s) 85, 213, 399, 449, 606, 807, 851, 903
AspS9I GGNCC 4 cut(s) 133, 296, 320, 415
AsuC2I CCSGG 5 cut(s) 266, 539, 832, 833, 1004
AsuHPI GGTGA 3 cut(s) 92, 427, 750
AvaI CYCGRG 3 cut(s) 305, 481, 831
AvaII GGWCC 4 cut(s) 133, 296, 320, 415
AvrII CCTAGG 1 cut(s) 887
BaeGI GKGCMC 2 cut(s) 50, 586
BamHI GGATCC 1 cut(s) 60
BanI GGYRCC 2 cut(s) 446, 966
BanII GRGCYC 2 cut(s) 165, 433
BauI CACGAG 1 cut(s) 401
BbsI GAAGAC 1 cut(s) 740
Bbv12I GWGCWC 2 cut(s) 50, 184
BbvI GCAGC 2 cut(s) 179, 352
BccI CCATC 1 cut(s) 621
BceAI ACGGC 7 cut(s) 155, 164, 224, 266, 544, 787, 916
BcgI CGANNNNNNTGC 2 cut(s) 103, 137
BciT130I CCWGG 1 cut(s) 457
BcnI CCSGG 5 cut(s) 266, 539, 832, 833, 1004
BcoDI GTCTC 4 cut(s) 199, 249, 768, 1020
BfaI CTAG 3 cut(s) 888, 959, 1030
BfoI RGCGCY 2 cut(s) 400, 450
BfuAI ACCTGC 1 cut(s) 954
BglI GCCNNNNNGGC 1 cut(s) 208
BisI GCNGC 8 cut(s) 168, 218, 276, 279, 282, 366, 525, 909
BlnI CCTAGG 1 cut(s) 887
BlsI GCNGC 8 cut(s) 169, 219, 277, 280, 283, 367, 526, 910
Bme1390I CCNGG 6 cut(s) 266, 457, 539, 832, 833, 1004
Bme18I GGWCC 4 cut(s) 133, 296, 320, 415
BmeT110I CYCGRG 3 cut(s) 305, 481, 831
BmgT120I GGNCC 4 cut(s) 133, 296, 320, 415
BmiI GGNNCC 4 cut(s) 62, 162, 448, 968
BmrFI CCNGG 6 cut(s) 266, 457, 539, 832, 833, 1004
BmsI GCATC 3 cut(s) 179, 676, 1020
BpiI GAAGAC 1 cut(s) 740
BpuEI CTTGAG 1 cut(s) 517
BpuMI CCSGG 5 cut(s) 266, 539, 832, 833, 1004
Bsa29I ATCGAT 1 cut(s) 684
BsaAI YACGTR 1 cut(s) 581
BsaHI GRCGYC 4 cut(s) 242, 447, 512, 522
BsaJI CCNNGG 8 cut(s) 129, 248, 336, 456, 800, 831, 887, 1002
BsaWI WCCGGW 1 cut(s) 766
BsaXI ACNNNNNCTCC 2 cut(s) 229, 259
Bsc4I CCNNNNNNNGG 9 cut(s) 57, 271, 341, 361, 456, 457, 458, 773, 1003
Bse118I RCCGGY 3 cut(s) 322, 816, 969
BseAI TCCGGA 1 cut(s) 766
BseBI CCWGG 1 cut(s) 457
BseCI ATCGAT 1 cut(s) 684
BseDI CCNNGG 8 cut(s) 129, 248, 336, 456, 800, 831, 887, 1002
BseGI GGATG 1 cut(s) 990
BseLI CCNNNNNNNGG 9 cut(s) 57, 271, 341, 361, 456, 457, 458, 773, 1003
BseSI GKGCMC 2 cut(s) 50, 586
BseX3I CGGCCG 1 cut(s) 149
BseXI GCAGC 2 cut(s) 179, 352
Bsh1236I CGCG 1 cut(s) 233
Bsh1285I CGRYCG 5 cut(s) 40, 152, 360, 952, 1008
BshFI GGCC 2 cut(s) 151, 275
BshNI GGYRCC 2 cut(s) 446, 966
BshVI ATCGAT 1 cut(s) 684
BsiEI CGRYCG 5 cut(s) 40, 152, 360, 952, 1008
BsiHKAI GWGCWC 2 cut(s) 50, 184
BsiHKCI CYCGRG 3 cut(s) 305, 481, 831
BsiSI CCGG 9 cut(s) 266, 323, 418, 538, 767, 817, 832, 970, 1004
BslFI GGGAC 1 cut(s) 474
BslI CCNNNNNNNGG 9 cut(s) 57, 271, 341, 361, 456, 457, 458, 773, 1003
BsmAI GTCTC 4 cut(s) 199, 249, 768, 1020
BsmBI CGTCTC 3 cut(s) 199, 249, 768
BsmFI GGGAC 1 cut(s) 474
BsmI GAATGC 2 cut(s) 368, 527
BsnI GGCC 2 cut(s) 151, 275
BsoBI CYCGRG 3 cut(s) 305, 481, 831
Bsp1286I GDGCHC 5 cut(s) 50, 165, 184, 433, 586
Bsp13I TCCGGA 1 cut(s) 766
Bsp143I GATC 7 cut(s) 27, 60, 228, 357, 755, 842, 998
BspANI GGCC 2 cut(s) 151, 275
BspDI ATCGAT 1 cut(s) 684
BspEI TCCGGA 1 cut(s) 766
BspFNI CGCG 1 cut(s) 233
BspLI GGNNCC 4 cut(s) 62, 162, 448, 968
BspMI ACCTGC 1 cut(s) 954
BspPI GGATC 3 cut(s) 55, 68, 993
BspT107I GGYRCC 2 cut(s) 446, 966
BsrFI RCCGGY 3 cut(s) 322, 816, 969
BssAI RCCGGY 3 cut(s) 322, 816, 969
BssECI CCNNGG 8 cut(s) 129, 248, 336, 456, 800, 831, 887, 1002
BssMI GATC 7 cut(s) 27, 60, 228, 357, 755, 842, 998
BssNI GRCGYC 4 cut(s) 242, 447, 512, 522
BssSI CACGAG 1 cut(s) 401
BssT1I CCWWGG 3 cut(s) 129, 800, 887
Bst2BI CACGAG 1 cut(s) 401
Bst2UI CCWGG 1 cut(s) 457
Bst4CI ACNGT 2 cut(s) 296, 762
BstACI GRCGYC 4 cut(s) 242, 447, 512, 522
BstBAI YACGTR 1 cut(s) 581
BstC8I GCNNGC 8 cut(s) 165, 184, 200, 215, 557, 828, 853, 971
BstDEI CTNAG 1 cut(s) 566
BstDSI CCRYGG 1 cut(s) 248
BstF5I GGATG 1 cut(s) 990
BstFNI CGCG 1 cut(s) 233
BstH2I RGCGCY 2 cut(s) 400, 450
BstHHI GCGC 8 cut(s) 85, 213, 399, 449, 606, 807, 851, 903
BstKTI GATC 7 cut(s) 30, 63, 231, 360, 758, 845, 1001
BstMAI GTCTC 4 cut(s) 199, 249, 768, 1020
BstMBI GATC 7 cut(s) 27, 60, 228, 357, 755, 842, 998
BstMCI CGRYCG 5 cut(s) 40, 152, 360, 952, 1008
BstMWI GCNNNNNNNGC 8 cut(s) 208, 217, 275, 281, 396, 610, 780, 813
BstNI CCWGG 1 cut(s) 457
BstNSI RCATGY 3 cut(s) 122, 217, 944
BstSCI CCNGG 6 cut(s) 264, 455, 537, 830, 831, 1002
BstSLI GKGCMC 2 cut(s) 50, 586
BstUI CGCG 1 cut(s) 233
BstV1I GCAGC 2 cut(s) 179, 352
BstV2I GAAGAC 1 cut(s) 740
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
BstZI CGGCCG 1 cut(s) 149
Bsu15I ATCGAT 1 cut(s) 684
BsuRI GGCC 2 cut(s) 151, 275
BsuTUI ATCGAT 1 cut(s) 684
BtgI CCRYGG 1 cut(s) 248
BtsCI GGATG 1 cut(s) 990
BveI ACCTGC 1 cut(s) 954
Cac8I GCNNGC 8 cut(s) 165, 184, 200, 215, 557, 828, 853, 971
CfoI GCGC 8 cut(s) 85, 213, 399, 449, 606, 807, 851, 903
Cfr10I RCCGGY 3 cut(s) 322, 816, 969
Cfr13I GGNCC 4 cut(s) 133, 296, 320, 415
Cfr9I CCCGGG 1 cut(s) 831
ClaI ATCGAT 1 cut(s) 684
CpoI CGGWCCG 1 cut(s) 320
CseI GACGC 4 cut(s) 222, 496, 520, 530
Csp6I GTAC 1 cut(s) 498
CspI CGGWCCG 1 cut(s) 320
CviAII CATG 4 cut(s) 119, 214, 226, 941
CviQI GTAC 1 cut(s) 498
DdeI CTNAG 1 cut(s) 566
DinI GGCGCC 1 cut(s) 448
DpnI GATC 7 cut(s) 29, 62, 230, 359, 757, 844, 1000
DpnII GATC 7 cut(s) 27, 60, 228, 357, 755, 842, 998
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 2 cut(s) 149, 273
EagI CGGCCG 1 cut(s) 149
EciI GGCGGA 5 cut(s) 333, 464, 910, 983, 988
EclXI CGGCCG 1 cut(s) 149
Eco130I CCWWGG 3 cut(s) 129, 800, 887
Eco24I GRGCYC 2 cut(s) 165, 433
Eco32I GATATC 1 cut(s) 702
Eco47I GGWCC 4 cut(s) 133, 296, 320, 415
Eco52I CGGCCG 1 cut(s) 149
Eco88I CYCGRG 3 cut(s) 305, 481, 831
EcoRII CCWGG 1 cut(s) 455
EcoRV GATATC 1 cut(s) 702
EcoT14I CCWWGG 3 cut(s) 129, 800, 887
EcoT38I GRGCYC 2 cut(s) 165, 433
EgeI GGCGCC 1 cut(s) 448
EheI GGCGCC 1 cut(s) 448
ErhI CCWWGG 3 cut(s) 129, 800, 887
Esp3I CGTCTC 3 cut(s) 199, 249, 768
FaeI CATG 4 cut(s) 122, 217, 229, 944
FaiI YATR 8 cut(s) 120, 215, 227, 255, 444, 728, 942, 1020
FaqI GGGAC 1 cut(s) 474
FatI CATG 4 cut(s) 118, 213, 225, 940
FauI CCCGC 6 cut(s) 59, 72, 172, 757, 767, 936
FblI GTMKAC 2 cut(s) 123, 236
Fnu4HI GCNGC 8 cut(s) 168, 218, 276, 279, 282, 366, 525, 909
FokI GGATG 1 cut(s) 977
FriOI GRGCYC 2 cut(s) 165, 433
Fsp4HI GCNGC 8 cut(s) 168, 218, 276, 279, 282, 366, 525, 909
FspBI CTAG 3 cut(s) 888, 959, 1030
GlaI GCGC 8 cut(s) 84, 212, 398, 448, 605, 806, 850, 902
GluI GCNGC 8 cut(s) 168, 218, 276, 279, 282, 366, 525, 909
HaeII RGCGCY 2 cut(s) 400, 450
HaeIII GGCC 2 cut(s) 151, 275
HapII CCGG 9 cut(s) 266, 323, 418, 538, 767, 817, 832, 970, 1004
HgaI GACGC 4 cut(s) 222, 496, 520, 530
HhaI GCGC 8 cut(s) 85, 213, 399, 449, 606, 807, 851, 903
Hin1I GRCGYC 4 cut(s) 242, 447, 512, 522
Hin1II CATG 4 cut(s) 122, 217, 229, 944
Hin6I GCGC 8 cut(s) 83, 211, 397, 447, 604, 805, 849, 901
HinP1I GCGC 8 cut(s) 83, 211, 397, 447, 604, 805, 849, 901
HincII GTYRAC 3 cut(s) 108, 124, 237
HindII GTYRAC 3 cut(s) 108, 124, 237
HinfI GANTC 9 cut(s) 109, 125, 308, 385, 572, 622, 639, 715, 976
HpaII CCGG 9 cut(s) 266, 323, 418, 538, 767, 817, 832, 970, 1004
HphI GGTGA 3 cut(s) 92, 427, 750
Hpy166II GTNNAC 6 cut(s) 48, 108, 124, 237, 299, 633
Hpy188I TCNGA 2 cut(s) 340, 510
Hpy188III TCNNGA 5 cut(s) 22, 144, 481, 767, 1025
Hpy8I GTNNAC 6 cut(s) 48, 108, 124, 237, 299, 633
Hpy99I CGWCG 5 cut(s) 238, 241, 244, 524, 742
HpyAV CCTTC 2 cut(s) 28, 462
HpyCH4III ACNGT 2 cut(s) 296, 762
HpyCH4IV ACGT 3 cut(s) 242, 580, 674
HpyCH4V TGCA 4 cut(s) 48, 368, 645, 865
HpyF10VI GCNNNNNNNGC 8 cut(s) 208, 217, 275, 281, 396, 610, 780, 813
HpyF3I CTNAG 1 cut(s) 566
HpySE526I ACGT 3 cut(s) 242, 580, 674
Hsp92I GRCGYC 4 cut(s) 242, 447, 512, 522
Hsp92II CATG 4 cut(s) 122, 217, 229, 944
HspAI GCGC 8 cut(s) 83, 211, 397, 447, 604, 805, 849, 901
KasI GGCGCC 1 cut(s) 446
Kpn2I TCCGGA 1 cut(s) 766
KroI GCCGGC 1 cut(s) 969
KroNI GCCGGC 1 cut(s) 971
Kzo9I GATC 7 cut(s) 27, 60, 228, 357, 755, 842, 998
LmnI GCTCC 1 cut(s) 160
Lsp1109I GCAGC 2 cut(s) 179, 352
LweI GCATC 3 cut(s) 179, 676, 1020
MaeI CTAG 3 cut(s) 888, 959, 1030
MaeII ACGT 3 cut(s) 242, 580, 674
MaeIII GTNAC 5 cut(s) 172, 290, 329, 561, 986
MalI GATC 7 cut(s) 29, 62, 230, 359, 757, 844, 1000
MboI GATC 7 cut(s) 27, 60, 228, 357, 755, 842, 998
MboII GAAGA 3 cut(s) 37, 670, 745
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 5 cut(s) 50, 165, 184, 433, 586
MluCI AATT 4 cut(s) 345, 504, 646, 808
Mly113I GGCGCC 1 cut(s) 447
MlyI GAGTC 7 cut(s) 103, 119, 317, 379, 616, 724, 985
MnlI CCTC 9 cut(s) 346, 410, 449, 477, 488, 596, 829, 894, 928
MroI TCCGGA 1 cut(s) 766
MroNI GCCGGC 1 cut(s) 969
MseI TTAA 1 cut(s) 96
MslI CAYNNNNRTG 3 cut(s) 187, 817, 860
MspI CCGG 9 cut(s) 266, 323, 418, 538, 767, 817, 832, 970, 1004
MspR9I CCNGG 6 cut(s) 266, 457, 539, 832, 833, 1004
Mva1269I GAATGC 2 cut(s) 368, 527
MvaI CCWGG 1 cut(s) 457
MvnI CGCG 1 cut(s) 233
MwoI GCNNNNNNNGC 8 cut(s) 208, 217, 275, 281, 396, 610, 780, 813
NaeI GCCGGC 1 cut(s) 971
NarI GGCGCC 1 cut(s) 447
NciI CCSGG 5 cut(s) 266, 539, 832, 833, 1004
NdeII GATC 7 cut(s) 27, 60, 228, 357, 755, 842, 998
NgoMIV GCCGGC 1 cut(s) 969
NlaIII CATG 4 cut(s) 122, 217, 229, 944
NlaIV GGNNCC 4 cut(s) 62, 162, 448, 968
NmeAIII GCCGAG 3 cut(s) 228, 721, 736
NmuCI GTSAC 1 cut(s) 329
NspI RCATGY 3 cut(s) 122, 217, 944
OliI CACNNNNGTG 1 cut(s) 817
PaeI GCATGC 1 cut(s) 217
PaeR7I CTCGAG 1 cut(s) 481
PaqCI CACCTGC 1 cut(s) 954
PciI ACATGT 2 cut(s) 118, 940
PcsI WCGNNNNNNNCGW 1 cut(s) 190
PctI GAATGC 2 cut(s) 368, 527
PdiI GCCGGC 1 cut(s) 971
PfeI GAWTC 2 cut(s) 572, 639
PflFI GACNNNGTC 1 cut(s) 241
PkrI GCNGC 8 cut(s) 169, 219, 277, 280, 283, 367, 526, 910
Ple19I CGATCG 1 cut(s) 360
PleI GAGTC 7 cut(s) 103, 119, 316, 379, 616, 723, 984
PluTI GGCGCC 1 cut(s) 450
PpsI GAGTC 7 cut(s) 103, 119, 316, 379, 616, 723, 984
Ppu21I YACGTR 1 cut(s) 581
PscI ACATGT 2 cut(s) 118, 940
Psp6I CCWGG 1 cut(s) 455
PspGI CCWGG 1 cut(s) 455
PspN4I GGNNCC 4 cut(s) 62, 162, 448, 968
PspPI GGNCC 4 cut(s) 133, 296, 320, 415
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 1 cut(s) 241
PvuI CGATCG 1 cut(s) 360
RsaI GTAC 1 cut(s) 499
RsaNI GTAC 1 cut(s) 498
RseI CAYNNNNRTG 3 cut(s) 187, 817, 860
Rsr2I CGGWCCG 1 cut(s) 320
RsrII CGGWCCG 1 cut(s) 320
SalI GTCGAC 2 cut(s) 122, 235
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 8 cut(s) 168, 218, 276, 279, 282, 366, 525, 909
Sau3AI GATC 7 cut(s) 27, 60, 228, 357, 755, 842, 998
Sau96I GGNCC 4 cut(s) 133, 296, 320, 415
SchI GAGTC 7 cut(s) 103, 119, 317, 379, 616, 724, 985
ScrFI CCNGG 6 cut(s) 266, 457, 539, 832, 833, 1004
SduI GDGCHC 5 cut(s) 50, 165, 184, 433, 586
SetI ASST 7 cut(s) 36, 77, 245, 417, 583, 677, 968
SfaNI GCATC 3 cut(s) 179, 676, 1020
SfoI GGCGCC 1 cut(s) 448
Sfr274I CTCGAG 1 cut(s) 481
SgrAI CRCCGGYG 1 cut(s) 816
SgrDI CGTCGACG 1 cut(s) 235
SinI GGWCC 4 cut(s) 133, 296, 320, 415
SlaI CTCGAG 1 cut(s) 481
SmaI CCCGGG 1 cut(s) 833
SmiMI CAYNNNNRTG 3 cut(s) 187, 817, 860
SmlI CTYRAG 2 cut(s) 481, 532
SmoI CTYRAG 2 cut(s) 481, 532
SphI GCATGC 1 cut(s) 217
Sse9I AATT 4 cut(s) 345, 504, 646, 808
SspDI GGCGCC 1 cut(s) 446
SspMI CTAG 3 cut(s) 888, 959, 1030
StyD4I CCNGG 6 cut(s) 264, 455, 537, 830, 831, 1002
StyI CCWWGG 3 cut(s) 129, 800, 887
TaaI ACNGT 2 cut(s) 296, 762
TaiI ACGT 3 cut(s) 245, 583, 677
TaqII GACCGA 2 cut(s) 26, 938
TasI AATT 4 cut(s) 345, 504, 646, 808
TauI GCSGC 6 cut(s) 220, 278, 281, 284, 527, 911
TfiI GAWTC 2 cut(s) 572, 639
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TseFI GTSAC 1 cut(s) 329
TseI GCWGC 2 cut(s) 167, 365
Tsp45I GTSAC 1 cut(s) 329
TspDTI ATGAA 2 cut(s) 670, 778
TspGWI ACGGA 5 cut(s) 125, 278, 357, 485, 694
TspMI CCCGGG 1 cut(s) 831
Tth111I GACNNNGTC 1 cut(s) 241
VneI GTGCAC 1 cut(s) 46
VpaK11BI GGWCC 4 cut(s) 133, 296, 320, 415
XapI RAATTY 1 cut(s) 345
XceI RCATGY 3 cut(s) 122, 217, 944
XhoI CTCGAG 1 cut(s) 481
XmaI CCCGGG 1 cut(s) 831
XmaJI CCTAGG 1 cut(s) 887
XmiI GTMKAC 2 cut(s) 123, 236
XspI CTAG 3 cut(s) 888, 959, 1030
ZraI GACGTC 1 cut(s) 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.