Rroxscaffold_75G00447400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000075
OG0000037
Physical Location & Seq
Forward (+)
43786 .. 47118
3333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_75G00447400.1

Sequence Viewer

Length: 1398 bp
ATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCTCGAGGACGCTTCTCCAGACTACAATTCGGACGCCTTACGACGCCAGATTCTCAAGCTGGGCTATTCCCGGTTCGCTCGCCGAAACCGAGGTTTGACAACCACCGATTGTCGTGGCGTTGGTCGCCGAGGACTTGGTATTTATGCCAACCGCGTGACTGAGCACACGGGAGGCCATCATCCGTCCCATCCAACTCCCGAGGGGGTTGGGGGGGGGCAACGACGTGTGACGCCCAGGCAGACGTGCCCTCGGCCTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGGACGGCGGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCTGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCAGCGTTGAAACATGTTCTCGGGTCGTTCTGCTAGGCAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCCTTTGACAACGCTGGCACCGCGTAGGGAGACCCTGCAACGAGCACAGCAGTCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAGGCATGCCAATGCAAGGGGCACAGGCACTACTACGATGTCCTTCCCCTAACCGAATGGCTCAGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

465

Amino Acids

50.53

Weight (kDa)

11.01

Isoelectric Point (pI)

59.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 57, 1204
AccB1I GGYRCC 3 cut(s) 406, 1129, 1379
AccI GTMKAC 2 cut(s) 48, 1370
AccII CGCG 4 cut(s) 45, 255, 594, 1135
AclWI GGATC 1 cut(s) 1104
AcoI YGGCCR 1 cut(s) 87
AcsI RAATTY 1 cut(s) 303
AcyI GRCGYC 6 cut(s) 54, 407, 474, 484, 671, 1201
AfaI GTAC 3 cut(s) 259, 935, 1169
AfiI CCNNNNNNNGG 8 cut(s) 85, 319, 417, 418, 419, 872, 1278, 1307
AflIII ACRYGT 3 cut(s) 664, 1046, 1170
AgsI TTSAA 7 cut(s) 208, 231, 723, 838, 901, 1043, 1193
AjiI CACGTC 2 cut(s) 665, 684
AjnI CCWGG 5 cut(s) 416, 674, 938, 1102, 1263
AleI CACNNNNGTG 1 cut(s) 924
AluBI AGCT 1 cut(s) 499
AluI AGCT 1 cut(s) 499
Alw21I GWGCWC 3 cut(s) 606, 1159, 1286
Alw26I GTCTC 6 cut(s) 11, 61, 280, 873, 1136, 1241
Alw44I GTGCAC 1 cut(s) 1282
AlwI GGATC 1 cut(s) 1104
Ama87I CYCGRG 5 cut(s) 78, 119, 443, 638, 1053
AoxI GGCC 4 cut(s) 87, 177, 613, 692
ApaLI GTGCAC 1 cut(s) 1282
ApeKI GCWGC 2 cut(s) 29, 323
ApoI RAATTY 1 cut(s) 303
AspA2I CCTAGG 1 cut(s) 995
AspLEI GCGC 8 cut(s) 25, 170, 357, 409, 711, 914, 959, 1011
AspS9I GGNCC 5 cut(s) 110, 134, 178, 374, 434
AsuC2I CCSGG 6 cut(s) 79, 80, 378, 432, 511, 873
AsuHPI GGTGA 2 cut(s) 387, 855
AvaI CYCGRG 5 cut(s) 78, 119, 443, 638, 1053
AvaII GGWCC 4 cut(s) 110, 134, 374, 434
AvrII CCTAGG 1 cut(s) 995
BaeGI GKGCMC 4 cut(s) 383, 689, 1286, 1315
BanI GGYRCC 3 cut(s) 406, 1129, 1379
BanII GRGCYC 1 cut(s) 393
BauI CACGAG 1 cut(s) 359
BbsI GAAGAC 1 cut(s) 845
Bbv12I GWGCWC 3 cut(s) 606, 1159, 1286
BbvI GCAGC 2 cut(s) 16, 310
BccI CCATC 4 cut(s) 191, 624, 636, 726
BceAI ACGGC 2 cut(s) 36, 893
BcgI CGANNNNNNTGC 2 cut(s) 1146, 1180
BciT130I CCWGG 5 cut(s) 418, 676, 940, 1104, 1265
BciVI GTATCC 1 cut(s) 1252
BcnI CCSGG 6 cut(s) 79, 80, 378, 432, 511, 873
BcoDI GTCTC 6 cut(s) 11, 61, 280, 873, 1136, 1241
BfaI CTAG 3 cut(s) 996, 1067, 1176
BfoI RGCGCY 2 cut(s) 358, 410
BfuI GTATCC 1 cut(s) 1252
BglI GCCNNNNNGGC 1 cut(s) 20
BisI GCNGC 6 cut(s) 30, 90, 93, 96, 324, 1017
BlnI CCTAGG 1 cut(s) 995
BlsI GCNGC 6 cut(s) 31, 91, 94, 97, 325, 1018
Bme18I GGWCC 4 cut(s) 110, 134, 374, 434
BmeT110I CYCGRG 5 cut(s) 78, 119, 443, 638, 1053
BmgBI CACGTC 2 cut(s) 665, 684
BmgT120I GGNCC 5 cut(s) 110, 134, 178, 374, 434
BmiI GGNNCC 6 cut(s) 180, 375, 408, 1131, 1270, 1381
BmsI GCATC 2 cut(s) 179, 781
BpiI GAAGAC 1 cut(s) 845
BpmI CTGGAG 1 cut(s) 441
Bpu10I CCTNAGC 1 cut(s) 1353
BpuEI CTTGAG 1 cut(s) 479
BpuMI CCSGG 6 cut(s) 79, 80, 378, 432, 511, 873
Bsa29I ATCGAT 1 cut(s) 789
BsaHI GRCGYC 6 cut(s) 54, 407, 474, 484, 671, 1201
BsaI GGTCTC 2 cut(s) 280, 1136
BsaXI ACNNNNNCTCC 2 cut(s) 41, 71
Bsc4I CCNNNNNNNGG 8 cut(s) 85, 319, 417, 418, 419, 872, 1278, 1307
Bse118I RCCGGY 3 cut(s) 136, 175, 923
Bse1I ACTGG 1 cut(s) 1094
BseBI CCWGG 5 cut(s) 418, 676, 940, 1104, 1265
BseCI ATCGAT 1 cut(s) 789
BseGI GGATG 4 cut(s) 155, 183, 619, 628
BseLI CCNNNNNNNGG 8 cut(s) 85, 319, 417, 418, 419, 872, 1278, 1307
BseMII CTCAG 2 cut(s) 591, 1367
BseNI ACTGG 1 cut(s) 1094
BseSI GKGCMC 4 cut(s) 383, 689, 1286, 1315
BseXI GCAGC 2 cut(s) 16, 310
BseYI CCCAGC 2 cut(s) 499, 1034
Bsh1236I CGCG 4 cut(s) 45, 255, 594, 1135
Bsh1285I CGRYCG 1 cut(s) 163
BshFI GGCC 4 cut(s) 89, 179, 615, 694
BshNI GGYRCC 3 cut(s) 406, 1129, 1379
BshVI ATCGAT 1 cut(s) 789
BsiEI CGRYCG 1 cut(s) 163
BsiHKAI GWGCWC 3 cut(s) 606, 1159, 1286
BsiHKCI CYCGRG 5 cut(s) 78, 119, 443, 638, 1053
BsiSI CCGG 8 cut(s) 79, 137, 176, 377, 432, 511, 872, 924
BslFI GGGAC 3 cut(s) 435, 610, 888
BslI CCNNNNNNNGG 8 cut(s) 85, 319, 417, 418, 419, 872, 1278, 1307
BsmAI GTCTC 6 cut(s) 11, 61, 280, 873, 1136, 1241
BsmBI CGTCTC 3 cut(s) 11, 61, 873
BsmFI GGGAC 3 cut(s) 435, 610, 888
BsmI GAATGC 2 cut(s) 326, 1110
BsnI GGCC 4 cut(s) 89, 179, 615, 694
Bso31I GGTCTC 2 cut(s) 280, 1136
BsoBI CYCGRG 5 cut(s) 78, 119, 443, 638, 1053
Bsp1286I GDGCHC 7 cut(s) 383, 393, 606, 689, 1159, 1286, 1315
Bsp143I GATC 4 cut(s) 40, 860, 950, 1096
BspANI GGCC 4 cut(s) 89, 179, 615, 694
BspCNI CTCAG 2 cut(s) 592, 1366
BspDI ATCGAT 1 cut(s) 789
BspFNI CGCG 4 cut(s) 45, 255, 594, 1135
BspLI GGNNCC 6 cut(s) 180, 375, 408, 1131, 1270, 1381
BspPI GGATC 1 cut(s) 1104
BspT107I GGYRCC 3 cut(s) 406, 1129, 1379
BspTNI GGTCTC 2 cut(s) 280, 1136
BsrFI RCCGGY 3 cut(s) 136, 175, 923
BsrI ACTGG 1 cut(s) 1094
BssAI RCCGGY 3 cut(s) 136, 175, 923
BssMI GATC 4 cut(s) 40, 860, 950, 1096
BssNI GRCGYC 6 cut(s) 54, 407, 474, 484, 671, 1201
BssSI CACGAG 1 cut(s) 359
BssT1I CCWWGG 3 cut(s) 294, 907, 995
Bst2BI CACGAG 1 cut(s) 359
Bst2UI CCWGG 5 cut(s) 418, 676, 940, 1104, 1265
Bst4CI ACNGT 4 cut(s) 110, 149, 867, 1273
BstACI GRCGYC 6 cut(s) 54, 407, 474, 484, 671, 1201
BstC8I GCNNGC 7 cut(s) 12, 27, 177, 520, 961, 1128, 1298
BstDEI CTNAG 2 cut(s) 600, 1353
BstDSI CCRYGG 1 cut(s) 60
BstF5I GGATG 4 cut(s) 155, 183, 619, 628
BstFNI CGCG 4 cut(s) 45, 255, 594, 1135
BstH2I RGCGCY 2 cut(s) 358, 410
BstHHI GCGC 8 cut(s) 25, 170, 357, 409, 711, 914, 959, 1011
BstKTI GATC 4 cut(s) 43, 863, 953, 1099
BstMAI GTCTC 6 cut(s) 11, 61, 280, 873, 1136, 1241
BstMBI GATC 4 cut(s) 40, 860, 950, 1096
BstMCI CGRYCG 1 cut(s) 163
BstNI CCWGG 5 cut(s) 418, 676, 940, 1104, 1265
BstNSI RCATGY 4 cut(s) 29, 1050, 1174, 1300
BstSLI GKGCMC 4 cut(s) 383, 689, 1286, 1315
BstUI CGCG 4 cut(s) 45, 255, 594, 1135
BstV1I GCAGC 2 cut(s) 16, 310
BstV2I GAAGAC 1 cut(s) 845
Bsu15I ATCGAT 1 cut(s) 789
BsuI GTATCC 1 cut(s) 1252
BsuRI GGCC 4 cut(s) 89, 179, 615, 694
BsuTUI ATCGAT 1 cut(s) 789
BtgI CCRYGG 1 cut(s) 60
BtgZI GCGATG 1 cut(s) 156
BtrI CACGTC 2 cut(s) 665, 684
BtsCI GGATG 4 cut(s) 155, 183, 619, 628
Cac8I GCNNGC 7 cut(s) 12, 27, 177, 520, 961, 1128, 1298
CfoI GCGC 8 cut(s) 25, 170, 357, 409, 711, 914, 959, 1011
Cfr10I RCCGGY 3 cut(s) 136, 175, 923
Cfr13I GGNCC 5 cut(s) 110, 134, 178, 374, 434
Cfr9I CCCGGG 1 cut(s) 78
ClaI ATCGAT 1 cut(s) 789
CpoI CGGWCCG 2 cut(s) 134, 434
CseI GACGC 5 cut(s) 34, 458, 482, 492, 679
CsiI ACCWGGT 1 cut(s) 1102
Csp6I GTAC 3 cut(s) 258, 934, 1168
CspI CGGWCCG 2 cut(s) 134, 434
CviAII CATG 5 cut(s) 26, 38, 1047, 1171, 1297
CviQI GTAC 3 cut(s) 258, 934, 1168
DdeI CTNAG 2 cut(s) 600, 1353
DinI GGCGCC 1 cut(s) 408
DpnI GATC 4 cut(s) 42, 862, 952, 1098
DpnII GATC 4 cut(s) 40, 860, 950, 1096
EaeI YGGCCR 1 cut(s) 87
EciI GGCGGA 3 cut(s) 147, 426, 1018
Eco130I CCWWGG 3 cut(s) 294, 907, 995
Eco24I GRGCYC 1 cut(s) 393
Eco31I GGTCTC 2 cut(s) 280, 1136
Eco32I GATATC 1 cut(s) 807
Eco47I GGWCC 4 cut(s) 110, 134, 374, 434
Eco88I CYCGRG 5 cut(s) 78, 119, 443, 638, 1053
EcoRII CCWGG 5 cut(s) 416, 674, 938, 1102, 1263
EcoRV GATATC 1 cut(s) 807
EcoT14I CCWWGG 3 cut(s) 294, 907, 995
EcoT38I GRGCYC 1 cut(s) 393
EgeI GGCGCC 1 cut(s) 408
EheI GGCGCC 1 cut(s) 408
ErhI CCWWGG 3 cut(s) 294, 907, 995
Esp3I CGTCTC 3 cut(s) 11, 61, 873
FaeI CATG 5 cut(s) 29, 41, 1050, 1174, 1300
FaqI GGGAC 3 cut(s) 435, 610, 888
FatI CATG 5 cut(s) 25, 37, 1046, 1170, 1296
FauI CCCGC 2 cut(s) 862, 873
FauNDI CATATG 1 cut(s) 1081
FblI GTMKAC 2 cut(s) 48, 1370
Fnu4HI GCNGC 6 cut(s) 30, 90, 93, 96, 324, 1017
FokI GGATG 4 cut(s) 142, 170, 606, 615
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 6 cut(s) 30, 90, 93, 96, 324, 1017
FspBI CTAG 3 cut(s) 996, 1067, 1176
GlaI GCGC 8 cut(s) 24, 169, 356, 408, 710, 913, 958, 1010
GluI GCNGC 6 cut(s) 30, 90, 93, 96, 324, 1017
GsaI CCCAGC 2 cut(s) 503, 1038
GsuI CTGGAG 1 cut(s) 441
HaeII RGCGCY 2 cut(s) 358, 410
HaeIII GGCC 4 cut(s) 89, 179, 615, 694
HapII CCGG 8 cut(s) 79, 137, 176, 377, 432, 511, 872, 924
HgaI GACGC 5 cut(s) 34, 458, 482, 492, 679
HhaI GCGC 8 cut(s) 25, 170, 357, 409, 711, 914, 959, 1011
Hin1I GRCGYC 6 cut(s) 54, 407, 474, 484, 671, 1201
Hin1II CATG 5 cut(s) 29, 41, 1050, 1174, 1300
Hin6I GCGC 8 cut(s) 23, 168, 355, 407, 709, 912, 957, 1009
HinP1I GCGC 8 cut(s) 23, 168, 355, 407, 709, 912, 957, 1009
HincII GTYRAC 2 cut(s) 49, 1371
HindII GTYRAC 2 cut(s) 49, 1371
HinfI GANTC 7 cut(s) 122, 220, 343, 490, 727, 744, 820
HpaII CCGG 8 cut(s) 79, 137, 176, 377, 432, 511, 872, 924
HphI GGTGA 2 cut(s) 387, 855
Hpy166II GTNNAC 5 cut(s) 49, 113, 738, 1284, 1371
Hpy188I TCNGA 3 cut(s) 160, 472, 1246
Hpy188III TCNNGA 4 cut(s) 197, 443, 458, 638
Hpy8I GTNNAC 5 cut(s) 49, 113, 738, 1284, 1371
Hpy99I CGWCG 7 cut(s) 50, 53, 56, 486, 666, 847, 1277
HpyAV CCTTC 3 cut(s) 423, 1344, 1353
HpyCH4III ACNGT 4 cut(s) 110, 149, 867, 1273
HpyCH4IV ACGT 5 cut(s) 54, 664, 683, 779, 1201
HpyCH4V TGCA 7 cut(s) 326, 750, 973, 1150, 1212, 1284, 1306
HpyF3I CTNAG 2 cut(s) 600, 1353
HpySE526I ACGT 5 cut(s) 54, 664, 683, 779, 1201
Hsp92I GRCGYC 6 cut(s) 54, 407, 474, 484, 671, 1201
Hsp92II CATG 5 cut(s) 29, 41, 1050, 1174, 1300
HspAI GCGC 8 cut(s) 23, 168, 355, 407, 709, 912, 957, 1009
KasI GGCGCC 1 cut(s) 406
KroI GCCGGC 1 cut(s) 175
KroNI GCCGGC 1 cut(s) 177
Kzo9I GATC 4 cut(s) 40, 860, 950, 1096
Lsp1109I GCAGC 2 cut(s) 16, 310
LweI GCATC 2 cut(s) 179, 781
MabI ACCWGGT 1 cut(s) 1102
MaeI CTAG 3 cut(s) 996, 1067, 1176
MaeII ACGT 5 cut(s) 54, 664, 683, 779, 1201
MaeIII GTNAC 4 cut(s) 104, 143, 595, 667
MalI GATC 4 cut(s) 42, 862, 952, 1098
MboI GATC 4 cut(s) 40, 860, 950, 1096
MboII GAAGA 2 cut(s) 775, 850
MhlI GDGCHC 7 cut(s) 383, 393, 606, 689, 1159, 1286, 1315
MluCI AATT 6 cut(s) 202, 303, 466, 751, 915, 1194
Mly113I GGCGCC 1 cut(s) 407
MlyI GAGTC 5 cut(s) 131, 214, 337, 721, 829
MmeI TCCRAC 2 cut(s) 183, 656
MroNI GCCGGC 1 cut(s) 175
MslI CAYNNNNRTG 3 cut(s) 924, 968, 1301
MspI CCGG 8 cut(s) 79, 137, 176, 377, 432, 511, 872, 924
Mva1269I GAATGC 2 cut(s) 326, 1110
MvaI CCWGG 5 cut(s) 418, 676, 940, 1104, 1265
MvnI CGCG 4 cut(s) 45, 255, 594, 1135
NaeI GCCGGC 1 cut(s) 177
NarI GGCGCC 1 cut(s) 407
NciI CCSGG 6 cut(s) 79, 80, 378, 432, 511, 873
NdeI CATATG 1 cut(s) 1081
NdeII GATC 4 cut(s) 40, 860, 950, 1096
NgoMIV GCCGGC 1 cut(s) 175
NlaIII CATG 5 cut(s) 29, 41, 1050, 1174, 1300
NlaIV GGNNCC 6 cut(s) 180, 375, 408, 1131, 1270, 1381
NmeAIII GCCGAG 5 cut(s) 40, 593, 670, 826, 841
NmuCI GTSAC 3 cut(s) 143, 595, 667
NspI RCATGY 4 cut(s) 29, 1050, 1174, 1300
OliI CACNNNNGTG 1 cut(s) 924
PaeI GCATGC 2 cut(s) 29, 1300
PaeR7I CTCGAG 1 cut(s) 443
PciI ACATGT 2 cut(s) 1046, 1170
PcsI WCGNNNNNNNCGW 1 cut(s) 526
PctI GAATGC 2 cut(s) 326, 1110
PdiI GCCGGC 1 cut(s) 177
PfeI GAWTC 2 cut(s) 490, 744
PflFI GACNNNGTC 2 cut(s) 53, 372
PfoI TCCNGGA 1 cut(s) 871
PkrI GCNGC 6 cut(s) 31, 91, 94, 97, 325, 1018
PleI GAGTC 5 cut(s) 130, 214, 337, 721, 828
PluTI GGCGCC 1 cut(s) 410
PpsI GAGTC 5 cut(s) 130, 214, 337, 721, 828
PscI ACATGT 2 cut(s) 1046, 1170
Psp6I CCWGG 5 cut(s) 416, 674, 938, 1102, 1263
PspFI CCCAGC 2 cut(s) 499, 1034
PspGI CCWGG 5 cut(s) 416, 674, 938, 1102, 1263
PspN4I GGNNCC 6 cut(s) 180, 375, 408, 1131, 1270, 1381
PspPI GGNCC 5 cut(s) 110, 134, 178, 374, 434
PsyI GACNNNGTC 2 cut(s) 53, 372
RsaI GTAC 3 cut(s) 259, 935, 1169
RsaNI GTAC 3 cut(s) 258, 934, 1168
RseI CAYNNNNRTG 3 cut(s) 924, 968, 1301
Rsr2I CGGWCCG 2 cut(s) 134, 434
RsrII CGGWCCG 2 cut(s) 134, 434
SalI GTCGAC 2 cut(s) 47, 1369
SatI GCNGC 6 cut(s) 30, 90, 93, 96, 324, 1017
Sau3AI GATC 4 cut(s) 40, 860, 950, 1096
Sau96I GGNCC 5 cut(s) 110, 134, 178, 374, 434
SchI GAGTC 5 cut(s) 131, 214, 337, 721, 829
SduI GDGCHC 7 cut(s) 383, 393, 606, 689, 1159, 1286, 1315
SexAI ACCWGGT 1 cut(s) 1102
SfaNI GCATC 2 cut(s) 179, 781
SfoI GGCGCC 1 cut(s) 408
Sfr274I CTCGAG 1 cut(s) 443
SgrAI CRCCGGYG 1 cut(s) 923
SgrDI CGTCGACG 1 cut(s) 47
SinI GGWCC 4 cut(s) 110, 134, 374, 434
SlaI CTCGAG 1 cut(s) 443
SmaI CCCGGG 1 cut(s) 80
SmiMI CAYNNNNRTG 3 cut(s) 924, 968, 1301
SmlI CTYRAG 2 cut(s) 443, 494
SmoI CTYRAG 2 cut(s) 443, 494
SphI GCATGC 2 cut(s) 29, 1300
SrfI GCCCGGGC 1 cut(s) 80
Sse9I AATT 6 cut(s) 202, 303, 466, 751, 915, 1194
SspDI GGCGCC 1 cut(s) 406
SspMI CTAG 3 cut(s) 996, 1067, 1176
StyI CCWWGG 3 cut(s) 294, 907, 995
TaaI ACNGT 4 cut(s) 110, 149, 867, 1273
TaiI ACGT 5 cut(s) 57, 667, 686, 782, 1204
TaqI TCGA 7 cut(s) 48, 125, 444, 730, 789, 949, 1370
TaqII GACCGA 2 cut(s) 177, 262
TasI AATT 6 cut(s) 202, 303, 466, 751, 915, 1194
TauI GCSGC 4 cut(s) 92, 95, 98, 1019
TfiI GAWTC 2 cut(s) 490, 744
TseFI GTSAC 3 cut(s) 143, 595, 667
TseI GCWGC 2 cut(s) 29, 323
Tsp45I GTSAC 3 cut(s) 143, 595, 667
TspDTI ATGAA 3 cut(s) 231, 775, 885
TspGWI ACGGA 4 cut(s) 92, 315, 612, 799
TspMI CCCGGG 1 cut(s) 78
Tth111I GACNNNGTC 2 cut(s) 53, 372
VneI GTGCAC 1 cut(s) 1282
VpaK11BI GGWCC 4 cut(s) 110, 134, 374, 434
XapI RAATTY 1 cut(s) 303
XceI RCATGY 4 cut(s) 29, 1050, 1174, 1300
XhoI CTCGAG 1 cut(s) 443
XmaI CCCGGG 1 cut(s) 78
XmaJI CCTAGG 1 cut(s) 995
XmiI GTMKAC 2 cut(s) 48, 1370
XspI CTAG 3 cut(s) 996, 1067, 1176
ZraI GACGTC 2 cut(s) 55, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.