Rroxscaffold_39G00448220

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000039
OG0000037
Physical Location & Seq
Forward (+)
12690 .. 13920
1231 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_39G00448220.1

Sequence Viewer

Length: 1017 bp
ATGGGGAGCCCGCAGGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCTTCCAGGGGACTTGTTCCCGAAAGCACTCGATCAACACGAGCGCACGACAGGAAACCGAGGTTTGACAACCACCGATTGTCGTGGCGTTGGTCGCCGAGGACTTGGTATTTATGCCAACCGCGTGACTGAGCACACGGGAGGCCATCATCCGTCCCATCCAACTCCCGAGGGGGTTGGGGGGCAACGACGTGTGACGCCCAGGCAGACGTGCCCTCGGCCTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGGACGGCGGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCTGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCCAGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

338

Amino Acids

36.63

Weight (kDa)

11.48

Isoelectric Point (pI)

52.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 93
AccB1I GGYRCC 1 cut(s) 442
AccI GTMKAC 1 cut(s) 84
AccII CGCG 3 cut(s) 81, 291, 570
AcoI YGGCCR 1 cut(s) 123
AcsI RAATTY 1 cut(s) 339
AcyI GRCGYC 3 cut(s) 90, 443, 644
AfaI GTAC 2 cut(s) 295, 908
AfiI CCNNNNNNNGG 7 cut(s) 24, 121, 355, 452, 453, 454, 845
AflIII ACRYGT 1 cut(s) 637
AgsI TTSAA 5 cut(s) 244, 267, 696, 811, 874
AjiI CACGTC 2 cut(s) 638, 657
AjnI CCWGG 4 cut(s) 23, 451, 647, 911
AleI CACNNNNGTG 1 cut(s) 897
Alw21I GWGCWC 2 cut(s) 32, 582
Alw26I GTCTC 4 cut(s) 47, 97, 316, 846
Ama87I CYCGRG 3 cut(s) 114, 155, 614
AoxI GGCC 5 cut(s) 15, 123, 213, 589, 665
ApeKI GCWGC 2 cut(s) 65, 359
ApoI RAATTY 1 cut(s) 339
AspA2I CCTAGG 1 cut(s) 968
AspLEI GCGC 9 cut(s) 61, 206, 393, 445, 492, 684, 887, 932, 984
AspS9I GGNCC 4 cut(s) 146, 170, 214, 410
AsuC2I CCSGG 4 cut(s) 115, 116, 414, 846
AsuHPI GGTGA 2 cut(s) 423, 828
AvaI CYCGRG 3 cut(s) 114, 155, 614
AvaII GGWCC 3 cut(s) 146, 170, 410
AvrII CCTAGG 1 cut(s) 968
BaeGI GKGCMC 2 cut(s) 419, 662
BanI GGYRCC 1 cut(s) 442
BanII GRGCYC 2 cut(s) 11, 429
BauI CACGAG 2 cut(s) 395, 485
BbsI GAAGAC 1 cut(s) 818
Bbv12I GWGCWC 2 cut(s) 32, 582
BbvI GCAGC 2 cut(s) 52, 346
BccI CCATC 4 cut(s) 227, 600, 612, 699
BceAI ACGGC 3 cut(s) 2, 72, 866
BciT130I CCWGG 4 cut(s) 25, 453, 649, 913
BcnI CCSGG 4 cut(s) 115, 116, 414, 846
BcoDI GTCTC 4 cut(s) 47, 97, 316, 846
BfaI CTAG 1 cut(s) 969
BfoI RGCGCY 2 cut(s) 394, 446
BglI GCCNNNNNGGC 1 cut(s) 56
BisI GCNGC 6 cut(s) 66, 126, 129, 132, 360, 990
BlnI CCTAGG 1 cut(s) 968
BlsI GCNGC 6 cut(s) 67, 127, 130, 133, 361, 991
Bme1390I CCNGG 8 cut(s) 25, 115, 116, 414, 453, 649, 846, 913
Bme18I GGWCC 3 cut(s) 146, 170, 410
BmeT110I CYCGRG 3 cut(s) 114, 155, 614
BmgBI CACGTC 2 cut(s) 638, 657
BmgT120I GGNCC 4 cut(s) 146, 170, 214, 410
BmiI GGNNCC 4 cut(s) 8, 216, 411, 444
BmrFI CCNGG 8 cut(s) 25, 115, 116, 414, 453, 649, 846, 913
BmsI GCATC 3 cut(s) 27, 215, 754
BpiI GAAGAC 1 cut(s) 818
BpuMI CCSGG 4 cut(s) 115, 116, 414, 846
Bsa29I ATCGAT 1 cut(s) 762
BsaHI GRCGYC 3 cut(s) 90, 443, 644
BsaI GGTCTC 1 cut(s) 316
BsaXI ACNNNNNCTCC 2 cut(s) 77, 107
Bsc4I CCNNNNNNNGG 7 cut(s) 24, 121, 355, 452, 453, 454, 845
Bse118I RCCGGY 3 cut(s) 172, 211, 896
BseBI CCWGG 4 cut(s) 25, 453, 649, 913
BseCI ATCGAT 1 cut(s) 762
BseGI GGATG 4 cut(s) 191, 219, 595, 604
BseLI CCNNNNNNNGG 7 cut(s) 24, 121, 355, 452, 453, 454, 845
BseMII CTCAG 1 cut(s) 567
BseSI GKGCMC 2 cut(s) 419, 662
BseXI GCAGC 2 cut(s) 52, 346
BseYI CCCAGC 1 cut(s) 1008
Bsh1236I CGCG 3 cut(s) 81, 291, 570
Bsh1285I CGRYCG 1 cut(s) 199
BshFI GGCC 5 cut(s) 17, 125, 215, 591, 667
BshNI GGYRCC 1 cut(s) 442
BshVI ATCGAT 1 cut(s) 762
BsiEI CGRYCG 1 cut(s) 199
BsiHKAI GWGCWC 2 cut(s) 32, 582
BsiHKCI CYCGRG 3 cut(s) 114, 155, 614
BsiSI CCGG 6 cut(s) 115, 173, 212, 413, 845, 897
BslFI GGGAC 3 cut(s) 470, 586, 861
BslI CCNNNNNNNGG 7 cut(s) 24, 121, 355, 452, 453, 454, 845
BsmAI GTCTC 4 cut(s) 47, 97, 316, 846
BsmBI CGTCTC 3 cut(s) 47, 97, 846
BsmFI GGGAC 3 cut(s) 470, 586, 861
BsmI GAATGC 1 cut(s) 362
BsnI GGCC 5 cut(s) 17, 125, 215, 591, 667
Bso31I GGTCTC 1 cut(s) 316
BsoBI CYCGRG 3 cut(s) 114, 155, 614
Bsp1286I GDGCHC 6 cut(s) 11, 32, 419, 429, 582, 662
Bsp143I GATC 4 cut(s) 76, 478, 833, 923
BspANI GGCC 5 cut(s) 17, 125, 215, 591, 667
BspCNI CTCAG 1 cut(s) 568
BspDI ATCGAT 1 cut(s) 762
BspFNI CGCG 3 cut(s) 81, 291, 570
BspLI GGNNCC 4 cut(s) 8, 216, 411, 444
BspT107I GGYRCC 1 cut(s) 442
BspTNI GGTCTC 1 cut(s) 316
BsrFI RCCGGY 3 cut(s) 172, 211, 896
BssAI RCCGGY 3 cut(s) 172, 211, 896
BssMI GATC 4 cut(s) 76, 478, 833, 923
BssNI GRCGYC 3 cut(s) 90, 443, 644
BssSI CACGAG 2 cut(s) 395, 485
BssT1I CCWWGG 3 cut(s) 330, 880, 968
Bst2BI CACGAG 2 cut(s) 395, 485
Bst2UI CCWGG 4 cut(s) 25, 453, 649, 913
Bst4CI ACNGT 3 cut(s) 146, 185, 840
BstACI GRCGYC 3 cut(s) 90, 443, 644
BstC8I GCNNGC 7 cut(s) 11, 15, 32, 48, 63, 213, 934
BstDEI CTNAG 1 cut(s) 576
BstDSI CCRYGG 1 cut(s) 96
BstF5I GGATG 4 cut(s) 191, 219, 595, 604
BstFNI CGCG 3 cut(s) 81, 291, 570
BstH2I RGCGCY 2 cut(s) 394, 446
BstHHI GCGC 9 cut(s) 61, 206, 393, 445, 492, 684, 887, 932, 984
BstKTI GATC 4 cut(s) 79, 481, 836, 926
BstMAI GTCTC 4 cut(s) 47, 97, 316, 846
BstMBI GATC 4 cut(s) 76, 478, 833, 923
BstMCI CGRYCG 1 cut(s) 199
BstNI CCWGG 4 cut(s) 25, 453, 649, 913
BstNSI RCATGY 1 cut(s) 65
BstSCI CCNGG 8 cut(s) 23, 113, 114, 412, 451, 647, 844, 911
BstSLI GKGCMC 2 cut(s) 419, 662
BstUI CGCG 3 cut(s) 81, 291, 570
BstV1I GCAGC 2 cut(s) 52, 346
BstV2I GAAGAC 1 cut(s) 818
Bsu15I ATCGAT 1 cut(s) 762
BsuRI GGCC 5 cut(s) 17, 125, 215, 591, 667
BsuTUI ATCGAT 1 cut(s) 762
BtgI CCRYGG 1 cut(s) 96
BtgZI GCGATG 1 cut(s) 192
BtrI CACGTC 2 cut(s) 638, 657
BtsCI GGATG 4 cut(s) 191, 219, 595, 604
Cac8I GCNNGC 7 cut(s) 11, 15, 32, 48, 63, 213, 934
CfoI GCGC 9 cut(s) 61, 206, 393, 445, 492, 684, 887, 932, 984
Cfr10I RCCGGY 3 cut(s) 172, 211, 896
Cfr13I GGNCC 4 cut(s) 146, 170, 214, 410
Cfr9I CCCGGG 1 cut(s) 114
ClaI ATCGAT 1 cut(s) 762
CpoI CGGWCCG 1 cut(s) 170
CseI GACGC 2 cut(s) 70, 652
Csp6I GTAC 2 cut(s) 294, 907
CspI CGGWCCG 1 cut(s) 170
CviAII CATG 2 cut(s) 62, 74
CviQI GTAC 2 cut(s) 294, 907
DdeI CTNAG 1 cut(s) 576
DinI GGCGCC 1 cut(s) 444
DpnI GATC 4 cut(s) 78, 480, 835, 925
DpnII GATC 4 cut(s) 76, 478, 833, 923
EaeI YGGCCR 1 cut(s) 123
EciI GGCGGA 2 cut(s) 183, 991
Eco130I CCWWGG 3 cut(s) 330, 880, 968
Eco24I GRGCYC 2 cut(s) 11, 429
Eco31I GGTCTC 1 cut(s) 316
Eco32I GATATC 1 cut(s) 780
Eco47I GGWCC 3 cut(s) 146, 170, 410
Eco88I CYCGRG 3 cut(s) 114, 155, 614
EcoRII CCWGG 4 cut(s) 23, 451, 647, 911
EcoRV GATATC 1 cut(s) 780
EcoT14I CCWWGG 3 cut(s) 330, 880, 968
EcoT38I GRGCYC 2 cut(s) 11, 429
EgeI GGCGCC 1 cut(s) 444
EheI GGCGCC 1 cut(s) 444
ErhI CCWWGG 3 cut(s) 330, 880, 968
Esp3I CGTCTC 3 cut(s) 47, 97, 846
FaeI CATG 2 cut(s) 65, 77
FaiI YATR 6 cut(s) 63, 75, 104, 440, 561, 806
FaqI GGGAC 3 cut(s) 470, 586, 861
FatI CATG 2 cut(s) 61, 73
FauI CCCGC 3 cut(s) 18, 835, 846
FblI GTMKAC 1 cut(s) 84
Fnu4HI GCNGC 6 cut(s) 66, 126, 129, 132, 360, 990
FokI GGATG 4 cut(s) 178, 206, 582, 591
FriOI GRGCYC 2 cut(s) 11, 429
Fsp4HI GCNGC 6 cut(s) 66, 126, 129, 132, 360, 990
FspBI CTAG 1 cut(s) 969
GlaI GCGC 9 cut(s) 60, 205, 392, 444, 491, 683, 886, 931, 983
GluI GCNGC 6 cut(s) 66, 126, 129, 132, 360, 990
GsaI CCCAGC 1 cut(s) 1012
HaeII RGCGCY 2 cut(s) 394, 446
HaeIII GGCC 5 cut(s) 17, 125, 215, 591, 667
HapII CCGG 6 cut(s) 115, 173, 212, 413, 845, 897
HgaI GACGC 2 cut(s) 70, 652
HhaI GCGC 9 cut(s) 61, 206, 393, 445, 492, 684, 887, 932, 984
Hin1I GRCGYC 3 cut(s) 90, 443, 644
Hin1II CATG 2 cut(s) 65, 77
Hin6I GCGC 9 cut(s) 59, 204, 391, 443, 490, 682, 885, 930, 982
HinP1I GCGC 9 cut(s) 59, 204, 391, 443, 490, 682, 885, 930, 982
HincII GTYRAC 1 cut(s) 85
HindII GTYRAC 1 cut(s) 85
HinfI GANTC 6 cut(s) 158, 256, 379, 700, 717, 793
HpaII CCGG 6 cut(s) 115, 173, 212, 413, 845, 897
HphI GGTGA 2 cut(s) 423, 828
Hpy166II GTNNAC 3 cut(s) 85, 149, 711
Hpy188I TCNGA 1 cut(s) 196
Hpy188III TCNNGA 3 cut(s) 233, 466, 614
Hpy8I GTNNAC 3 cut(s) 85, 149, 711
Hpy99I CGWCG 5 cut(s) 86, 89, 92, 639, 820
HpyAV CCTTC 1 cut(s) 458
HpyCH4III ACNGT 3 cut(s) 146, 185, 840
HpyCH4IV ACGT 4 cut(s) 90, 637, 656, 752
HpyCH4V TGCA 3 cut(s) 362, 723, 946
HpyF3I CTNAG 1 cut(s) 576
HpySE526I ACGT 4 cut(s) 90, 637, 656, 752
Hsp92I GRCGYC 3 cut(s) 90, 443, 644
Hsp92II CATG 2 cut(s) 65, 77
HspAI GCGC 9 cut(s) 59, 204, 391, 443, 490, 682, 885, 930, 982
KasI GGCGCC 1 cut(s) 442
KroI GCCGGC 1 cut(s) 211
KroNI GCCGGC 1 cut(s) 213
Kzo9I GATC 4 cut(s) 76, 478, 833, 923
LmnI GCTCC 2 cut(s) 6, 27
Lsp1109I GCAGC 2 cut(s) 52, 346
LweI GCATC 3 cut(s) 27, 215, 754
MaeI CTAG 1 cut(s) 969
MaeII ACGT 4 cut(s) 90, 637, 656, 752
MaeIII GTNAC 5 cut(s) 19, 140, 179, 571, 640
MalI GATC 4 cut(s) 78, 480, 835, 925
MboI GATC 4 cut(s) 76, 478, 833, 923
MboII GAAGA 2 cut(s) 748, 823
MhlI GDGCHC 6 cut(s) 11, 32, 419, 429, 582, 662
MluCI AATT 4 cut(s) 238, 339, 724, 888
Mly113I GGCGCC 1 cut(s) 443
MlyI GAGTC 5 cut(s) 167, 250, 373, 694, 802
MmeI TCCRAC 2 cut(s) 219, 632
MroNI GCCGGC 1 cut(s) 211
MslI CAYNNNNRTG 3 cut(s) 35, 897, 941
MspI CCGG 6 cut(s) 115, 173, 212, 413, 845, 897
MspR9I CCNGG 8 cut(s) 25, 115, 116, 414, 453, 649, 846, 913
Mva1269I GAATGC 1 cut(s) 362
MvaI CCWGG 4 cut(s) 25, 453, 649, 913
MvnI CGCG 3 cut(s) 81, 291, 570
NaeI GCCGGC 1 cut(s) 213
NarI GGCGCC 1 cut(s) 443
NciI CCSGG 4 cut(s) 115, 116, 414, 846
NdeII GATC 4 cut(s) 76, 478, 833, 923
NgoMIV GCCGGC 1 cut(s) 211
NlaIII CATG 2 cut(s) 65, 77
NlaIV GGNNCC 4 cut(s) 8, 216, 411, 444
NmeAIII GCCGAG 5 cut(s) 76, 569, 643, 799, 814
NmuCI GTSAC 3 cut(s) 179, 571, 640
NspI RCATGY 1 cut(s) 65
OliI CACNNNNGTG 1 cut(s) 897
PaeI GCATGC 1 cut(s) 65
PcsI WCGNNNNNNNCGW 2 cut(s) 38, 483
PctI GAATGC 1 cut(s) 362
PdiI GCCGGC 1 cut(s) 213
PfeI GAWTC 1 cut(s) 717
PflFI GACNNNGTC 2 cut(s) 89, 408
PfoI TCCNGGA 1 cut(s) 844
PkrI GCNGC 6 cut(s) 67, 127, 130, 133, 361, 991
PleI GAGTC 5 cut(s) 166, 250, 373, 694, 801
PluTI GGCGCC 1 cut(s) 446
PpsI GAGTC 5 cut(s) 166, 250, 373, 694, 801
Psp6I CCWGG 4 cut(s) 23, 451, 647, 911
PspFI CCCAGC 1 cut(s) 1008
PspGI CCWGG 4 cut(s) 23, 451, 647, 911
PspN4I GGNNCC 4 cut(s) 8, 216, 411, 444
PspPI GGNCC 4 cut(s) 146, 170, 214, 410
PsyI GACNNNGTC 2 cut(s) 89, 408
RsaI GTAC 2 cut(s) 295, 908
RsaNI GTAC 2 cut(s) 294, 907
RseI CAYNNNNRTG 3 cut(s) 35, 897, 941
Rsr2I CGGWCCG 1 cut(s) 170
RsrII CGGWCCG 1 cut(s) 170
SalI GTCGAC 1 cut(s) 83
SatI GCNGC 6 cut(s) 66, 126, 129, 132, 360, 990
Sau3AI GATC 4 cut(s) 76, 478, 833, 923
Sau96I GGNCC 4 cut(s) 146, 170, 214, 410
SchI GAGTC 5 cut(s) 167, 250, 373, 694, 802
ScrFI CCNGG 8 cut(s) 25, 115, 116, 414, 453, 649, 846, 913
SduI GDGCHC 6 cut(s) 11, 32, 419, 429, 582, 662
SetI ASST 5 cut(s) 93, 511, 640, 659, 755
SfaNI GCATC 3 cut(s) 27, 215, 754
SfoI GGCGCC 1 cut(s) 444
SgrAI CRCCGGYG 1 cut(s) 896
SgrDI CGTCGACG 1 cut(s) 83
SinI GGWCC 3 cut(s) 146, 170, 410
SmaI CCCGGG 1 cut(s) 116
SmiMI CAYNNNNRTG 3 cut(s) 35, 897, 941
SphI GCATGC 1 cut(s) 65
SrfI GCCCGGGC 1 cut(s) 116
Sse9I AATT 4 cut(s) 238, 339, 724, 888
SspDI GGCGCC 1 cut(s) 442
SspMI CTAG 1 cut(s) 969
StyD4I CCNGG 8 cut(s) 23, 113, 114, 412, 451, 647, 844, 911
StyI CCWWGG 3 cut(s) 330, 880, 968
TaaI ACNGT 3 cut(s) 146, 185, 840
TaiI ACGT 4 cut(s) 93, 640, 659, 755
TaqI TCGA 6 cut(s) 84, 161, 477, 703, 762, 922
TaqII GACCGA 2 cut(s) 213, 298
TasI AATT 4 cut(s) 238, 339, 724, 888
TauI GCSGC 4 cut(s) 128, 131, 134, 992
TfiI GAWTC 1 cut(s) 717
TseFI GTSAC 3 cut(s) 179, 571, 640
TseI GCWGC 2 cut(s) 65, 359
Tsp45I GTSAC 3 cut(s) 179, 571, 640
TspDTI ATGAA 3 cut(s) 267, 748, 858
TspGWI ACGGA 4 cut(s) 128, 351, 588, 772
TspMI CCCGGG 1 cut(s) 114
Tth111I GACNNNGTC 2 cut(s) 89, 408
VpaK11BI GGWCC 3 cut(s) 146, 170, 410
XapI RAATTY 1 cut(s) 339
XceI RCATGY 1 cut(s) 65
XmaI CCCGGG 1 cut(s) 114
XmaJI CCTAGG 1 cut(s) 968
XmiI GTMKAC 1 cut(s) 84
XspI CTAG 1 cut(s) 969
ZraI GACGTC 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.