Rroxscaffold_92G00446510

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000092
OG0000037
Physical Location & Seq
Forward (+)
49265 .. 50978
1714 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_92G00446510.1

Sequence Viewer

Length: 870 bp
ATGGCCCACTTGGAGCTCTCGATTCCTTGGCGTGGCTCAACAAAGCAGCCACGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGTTCACGGGCTCCGGCTATCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAGTCGGACGAACGATTTGCACGTCGGTATCGCTGCGGGCCTCCACGAGAGTTTCCTGCGGCTTCGCCCCGCTCGGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCGGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCGGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAATGGGGAGCCCGCAGGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCGGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCGGGCTTTGGCCGCCGCCGCGATCCAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCGGGACGGCGGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCTGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGCGCGCAGAGCCGCAAGACCCTCCGCCCCCGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

289

Amino Acids

32.11

Weight (kDa)

11.21

Isoelectric Point (pI)

57.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 462
AatII GACGTC 1 cut(s) 579
AccBSI CCGCTC 1 cut(s) 292
AccI GTMKAC 1 cut(s) 570
AccII CGCG 4 cut(s) 536, 567, 619, 836
AclWI GGATC 3 cut(s) 385, 398, 615
AcoI YGGCCR 1 cut(s) 608
AcyI GRCGYC 1 cut(s) 576
AfaI GTAC 1 cut(s) 761
AfiI CCNNNNNNNGG 6 cut(s) 32, 294, 314, 387, 510, 606
AflIII ACRYGT 1 cut(s) 448
AgsI TTSAA 3 cut(s) 475, 665, 727
AjiI CACGTC 1 cut(s) 243
AjnI CCWGG 2 cut(s) 509, 764
AleI CACNNNNGTG 1 cut(s) 750
AluBI AGCT 3 cut(s) 16, 184, 405
AluI AGCT 3 cut(s) 16, 184, 405
Alw21I GWGCWC 3 cut(s) 18, 380, 518
Alw26I GTCTC 3 cut(s) 533, 583, 700
Alw44I GTGCAC 1 cut(s) 376
AlwI GGATC 3 cut(s) 385, 398, 615
Ama87I CYCGRG 2 cut(s) 293, 697
AoxI GGCC 5 cut(s) 3, 258, 481, 501, 608
ApaLI GTGCAC 1 cut(s) 376
ApeKI GCWGC 3 cut(s) 46, 253, 551
ArsI GACNNNNNNTTYG 2 cut(s) 219, 251
Asp700I GAANNNNTTC 1 cut(s) 138
AspA2I CCTAGG 1 cut(s) 821
AspLEI GCGC 7 cut(s) 99, 415, 547, 740, 785, 836, 838
AspS9I GGNCC 5 cut(s) 4, 258, 318, 464, 481
AsuC2I CCSGG 2 cut(s) 601, 862
AsuHPI GGTGA 3 cut(s) 297, 422, 682
AvaI CYCGRG 2 cut(s) 293, 697
AvaII GGWCC 2 cut(s) 318, 464
AvrII CCTAGG 1 cut(s) 821
BaeGI GKGCMC 1 cut(s) 380
BaeI ACNNNNGTAYC 2 cut(s) 231, 264
BamHI GGATCC 1 cut(s) 390
BanII GRGCYC 3 cut(s) 18, 150, 497
BauI CACGAG 1 cut(s) 265
BbsI GAAGAC 1 cut(s) 672
Bbv12I GWGCWC 3 cut(s) 18, 380, 518
BbvI GCAGC 3 cut(s) 58, 240, 538
BccI CCATC 1 cut(s) 316
BceAI ACGGC 4 cut(s) 39, 488, 558, 719
BcgI CGANNNNNNTGC 8 cut(s) 76, 110, 219, 253, 312, 346, 433, 467
BciT130I CCWGG 2 cut(s) 511, 766
BcnI CCSGG 2 cut(s) 601, 862
BcoDI GTCTC 3 cut(s) 533, 583, 700
BfaI CTAG 2 cut(s) 188, 822
BisI GCNGC 8 cut(s) 47, 254, 280, 552, 611, 614, 617, 844
BlnI CCTAGG 1 cut(s) 821
BlsI GCNGC 8 cut(s) 48, 255, 281, 553, 612, 615, 618, 845
Bme1390I CCNGG 4 cut(s) 511, 601, 766, 862
Bme18I GGWCC 2 cut(s) 318, 464
BmeT110I CYCGRG 2 cut(s) 293, 697
BmgBI CACGTC 1 cut(s) 243
BmgT120I GGNCC 5 cut(s) 4, 258, 318, 464, 481
BmiI GGNNCC 6 cut(s) 149, 179, 319, 320, 392, 494
BmrFI CCNGG 4 cut(s) 511, 601, 766, 862
BmrI ACTGGG 1 cut(s) 215
BmsI GCATC 2 cut(s) 94, 513
BmuI ACTGGG 1 cut(s) 215
BpiI GAAGAC 1 cut(s) 672
BpuMI CCSGG 2 cut(s) 601, 862
BsaHI GRCGYC 1 cut(s) 576
BsaJI CCNNGG 7 cut(s) 26, 460, 582, 733, 765, 821, 860
BsaXI ACNNNNNCTCC 2 cut(s) 563, 593
Bsc4I CCNNNNNNNGG 6 cut(s) 32, 294, 314, 387, 510, 606
Bse118I RCCGGY 1 cut(s) 749
Bse1I ACTGG 1 cut(s) 221
BseBI CCWGG 2 cut(s) 511, 766
BseDI CCNNGG 7 cut(s) 26, 460, 582, 733, 765, 821, 860
BseLI CCNNNNNNNGG 6 cut(s) 32, 294, 314, 387, 510, 606
BseMII CTCAG 1 cut(s) 150
BseNI ACTGG 1 cut(s) 221
BsePI GCGCGC 1 cut(s) 834
BseSI GKGCMC 1 cut(s) 380
BseXI GCAGC 3 cut(s) 58, 240, 538
Bsh1236I CGCG 4 cut(s) 536, 567, 619, 836
Bsh1285I CGRYCG 1 cut(s) 370
BshFI GGCC 5 cut(s) 5, 260, 483, 503, 610
BsiEI CGRYCG 1 cut(s) 370
BsiHKAI GWGCWC 3 cut(s) 18, 380, 518
BsiHKCI CYCGRG 2 cut(s) 293, 697
BsiSI CCGG 4 cut(s) 151, 600, 750, 862
BslFI GGGAC 2 cut(s) 304, 714
BslI CCNNNNNNNGG 6 cut(s) 32, 294, 314, 387, 510, 606
BsmAI GTCTC 3 cut(s) 533, 583, 700
BsmBI CGTCTC 3 cut(s) 533, 583, 700
BsmFI GGGAC 2 cut(s) 304, 714
BsnI GGCC 5 cut(s) 5, 260, 483, 503, 610
BsoBI CYCGRG 2 cut(s) 293, 697
Bsp1286I GDGCHC 5 cut(s) 18, 150, 380, 497, 518
Bsp143I GATC 6 cut(s) 357, 390, 562, 620, 687, 776
BspANI GGCC 5 cut(s) 5, 260, 483, 503, 610
BspCNI CTCAG 1 cut(s) 151
BspFNI CGCG 4 cut(s) 536, 567, 619, 836
BspLI GGNNCC 6 cut(s) 149, 179, 319, 320, 392, 494
BspPI GGATC 3 cut(s) 385, 398, 615
BsrBI CCGCTC 1 cut(s) 292
BsrFI RCCGGY 1 cut(s) 749
BsrI ACTGG 1 cut(s) 221
BssAI RCCGGY 1 cut(s) 749
BssECI CCNNGG 7 cut(s) 26, 460, 582, 733, 765, 821, 860
BssHII GCGCGC 1 cut(s) 834
BssMI GATC 6 cut(s) 357, 390, 562, 620, 687, 776
BssNI GRCGYC 1 cut(s) 576
BssSI CACGAG 1 cut(s) 265
BssT1I CCWWGG 4 cut(s) 26, 460, 733, 821
Bst2BI CACGAG 1 cut(s) 265
Bst2UI CCWGG 2 cut(s) 511, 766
Bst4CI ACNGT 2 cut(s) 194, 694
BstACI GRCGYC 1 cut(s) 576
BstC8I GCNNGC 9 cut(s) 258, 331, 497, 501, 518, 534, 549, 787, 836
BstDEI CTNAG 1 cut(s) 159
BstDSI CCRYGG 1 cut(s) 582
BstFNI CGCG 4 cut(s) 536, 567, 619, 836
BstHHI GCGC 7 cut(s) 99, 415, 547, 740, 785, 836, 838
BstKTI GATC 6 cut(s) 360, 393, 565, 623, 690, 779
BstMAI GTCTC 3 cut(s) 533, 583, 700
BstMBI GATC 6 cut(s) 357, 390, 562, 620, 687, 776
BstMCI CGRYCG 1 cut(s) 370
BstMWI GCNNNNNNNGC 6 cut(s) 542, 551, 610, 616, 746, 840
BstNI CCWGG 2 cut(s) 511, 766
BstNSI RCATGY 3 cut(s) 333, 452, 551
BstSCI CCNGG 4 cut(s) 509, 599, 764, 860
BstSLI GKGCMC 1 cut(s) 380
BstUI CGCG 4 cut(s) 536, 567, 619, 836
BstV1I GCAGC 3 cut(s) 58, 240, 538
BstV2I GAAGAC 1 cut(s) 672
BstX2I RGATCY 1 cut(s) 390
BstYI RGATCY 1 cut(s) 390
BsuRI GGCC 5 cut(s) 5, 260, 483, 503, 610
BtgI CCRYGG 1 cut(s) 582
BtrI CACGTC 1 cut(s) 243
Cac8I GCNNGC 9 cut(s) 258, 331, 497, 501, 518, 534, 549, 787, 836
CfoI GCGC 7 cut(s) 99, 415, 547, 740, 785, 836, 838
Cfr10I RCCGGY 1 cut(s) 749
Cfr13I GGNCC 5 cut(s) 4, 258, 318, 464, 481
CseI GACGC 1 cut(s) 556
Csp6I GTAC 1 cut(s) 760
CviAII CATG 4 cut(s) 330, 449, 548, 560
CviQI GTAC 1 cut(s) 760
DdeI CTNAG 1 cut(s) 159
DpnI GATC 6 cut(s) 359, 392, 564, 622, 689, 778
DpnII GATC 6 cut(s) 357, 390, 562, 620, 687, 776
DraI TTTAAA 1 cut(s) 69
DrdI GACNNNNNNGTC 1 cut(s) 462
DseDI GACNNNNNNGTC 1 cut(s) 462
EaeI YGGCCR 1 cut(s) 608
EciI GGCGGA 1 cut(s) 845
Ecl136II GAGCTC 1 cut(s) 16
Eco130I CCWWGG 4 cut(s) 26, 460, 733, 821
Eco24I GRGCYC 3 cut(s) 18, 150, 497
Eco32I GATATC 1 cut(s) 634
Eco47I GGWCC 2 cut(s) 318, 464
Eco53kI GAGCTC 1 cut(s) 16
Eco88I CYCGRG 2 cut(s) 293, 697
EcoICRI GAGCTC 1 cut(s) 16
EcoO109I RGGNCCY 1 cut(s) 318
EcoRII CCWGG 2 cut(s) 509, 764
EcoRV GATATC 1 cut(s) 634
EcoT14I CCWWGG 4 cut(s) 26, 460, 733, 821
EcoT38I GRGCYC 3 cut(s) 18, 150, 497
ErhI CCWWGG 4 cut(s) 26, 460, 733, 821
Esp3I CGTCTC 3 cut(s) 533, 583, 700
FaeI CATG 4 cut(s) 333, 452, 551, 563
FaiI YATR 8 cut(s) 217, 300, 331, 450, 549, 561, 590, 660
FaqI GGGAC 2 cut(s) 304, 714
FatI CATG 4 cut(s) 329, 448, 547, 559
FauI CCCGC 7 cut(s) 249, 297, 389, 402, 504, 689, 699
FblI GTMKAC 1 cut(s) 570
Fnu4HI GCNGC 8 cut(s) 47, 254, 280, 552, 611, 614, 617, 844
FriOI GRGCYC 3 cut(s) 18, 150, 497
Fsp4HI GCNGC 8 cut(s) 47, 254, 280, 552, 611, 614, 617, 844
FspBI CTAG 2 cut(s) 188, 822
GlaI GCGC 7 cut(s) 98, 414, 546, 739, 784, 835, 837
GluI GCNGC 8 cut(s) 47, 254, 280, 552, 611, 614, 617, 844
HaeIII GGCC 5 cut(s) 5, 260, 483, 503, 610
HapII CCGG 4 cut(s) 151, 600, 750, 862
HgaI GACGC 1 cut(s) 556
HhaI GCGC 7 cut(s) 99, 415, 547, 740, 785, 836, 838
Hin1I GRCGYC 1 cut(s) 576
Hin1II CATG 4 cut(s) 333, 452, 551, 563
Hin6I GCGC 7 cut(s) 97, 413, 545, 738, 783, 834, 836
HinP1I GCGC 7 cut(s) 97, 413, 545, 738, 783, 834, 836
HincII GTYRAC 2 cut(s) 438, 571
HindII GTYRAC 2 cut(s) 438, 571
HinfI GANTC 4 cut(s) 22, 439, 456, 647
HpaII CCGG 4 cut(s) 151, 600, 750, 862
HphI GGTGA 3 cut(s) 297, 422, 682
Hpy166II GTNNAC 5 cut(s) 142, 305, 378, 438, 571
Hpy188I TCNGA 5 cut(s) 160, 173, 227, 354, 455
Hpy188III TCNNGA 4 cut(s) 19, 321, 475, 699
Hpy8I GTNNAC 5 cut(s) 142, 305, 378, 438, 571
Hpy99I CGWCG 5 cut(s) 247, 572, 575, 578, 674
HpyAV CCTTC 1 cut(s) 357
HpyCH4III ACNGT 2 cut(s) 194, 694
HpyCH4IV ACGT 2 cut(s) 242, 576
HpyCH4V TGCA 3 cut(s) 240, 378, 799
HpyF10VI GCNNNNNNNGC 6 cut(s) 542, 551, 610, 616, 746, 840
HpyF3I CTNAG 1 cut(s) 159
HpySE526I ACGT 2 cut(s) 242, 576
Hsp92I GRCGYC 1 cut(s) 576
Hsp92II CATG 4 cut(s) 333, 452, 551, 563
HspAI GCGC 7 cut(s) 97, 413, 545, 738, 783, 834, 836
KflI GGGWCCC 1 cut(s) 318
Kzo9I GATC 6 cut(s) 357, 390, 562, 620, 687, 776
LmnI GCTCC 4 cut(s) 13, 153, 492, 513
Lsp1109I GCAGC 3 cut(s) 58, 240, 538
LweI GCATC 2 cut(s) 94, 513
MaeI CTAG 2 cut(s) 188, 822
MaeII ACGT 2 cut(s) 242, 576
MaeIII GTNAC 1 cut(s) 505
MalI GATC 6 cut(s) 359, 392, 564, 622, 689, 778
MbiI CCGCTC 1 cut(s) 292
MboI GATC 6 cut(s) 357, 390, 562, 620, 687, 776
MboII GAAGA 2 cut(s) 367, 677
MflI RGATCY 1 cut(s) 390
MhlI GDGCHC 5 cut(s) 18, 150, 380, 497, 518
MluCI AATT 1 cut(s) 741
MlyI GAGTC 3 cut(s) 433, 450, 656
MmeI TCCRAC 2 cut(s) 205, 433
MnlI CCTC 8 cut(s) 81, 118, 154, 167, 271, 763, 828, 863
MroXI GAANNNNTTC 1 cut(s) 138
MseI TTAA 2 cut(s) 68, 426
MslI CAYNNNNRTG 3 cut(s) 521, 750, 794
MspI CCGG 4 cut(s) 151, 600, 750, 862
MspR9I CCNGG 4 cut(s) 511, 601, 766, 862
MvaI CCWGG 2 cut(s) 511, 766
MvnI CGCG 4 cut(s) 536, 567, 619, 836
MwoI GCNNNNNNNGC 6 cut(s) 542, 551, 610, 616, 746, 840
NciI CCSGG 2 cut(s) 601, 862
NdeII GATC 6 cut(s) 357, 390, 562, 620, 687, 776
NlaIII CATG 4 cut(s) 333, 452, 551, 563
NlaIV GGNNCC 6 cut(s) 149, 179, 319, 320, 392, 494
NmeAIII GCCGAG 2 cut(s) 653, 668
NspI RCATGY 3 cut(s) 333, 452, 551
OliI CACNNNNGTG 1 cut(s) 750
PaeI GCATGC 2 cut(s) 333, 551
PauI GCGCGC 1 cut(s) 834
PciI ACATGT 1 cut(s) 448
PcsI WCGNNNNNNNCGW 2 cut(s) 239, 524
PdmI GAANNNNTTC 1 cut(s) 138
PfeI GAWTC 1 cut(s) 22
PflFI GACNNNGTC 1 cut(s) 575
PkrI GCNGC 8 cut(s) 48, 255, 281, 553, 612, 615, 618, 845
PleI GAGTC 3 cut(s) 433, 450, 655
PpsI GAGTC 3 cut(s) 433, 450, 655
PpuMI RGGWCCY 1 cut(s) 318
PscI ACATGT 1 cut(s) 448
Psp124BI GAGCTC 1 cut(s) 18
Psp5II RGGWCCY 1 cut(s) 318
Psp6I CCWGG 2 cut(s) 509, 764
PspGI CCWGG 2 cut(s) 509, 764
PspN4I GGNNCC 6 cut(s) 149, 179, 319, 320, 392, 494
PspPI GGNCC 5 cut(s) 4, 258, 318, 464, 481
PspPPI RGGWCCY 1 cut(s) 318
PsuI RGATCY 1 cut(s) 390
PsyI GACNNNGTC 1 cut(s) 575
PteI GCGCGC 1 cut(s) 834
RsaI GTAC 1 cut(s) 761
RsaNI GTAC 1 cut(s) 760
RseI CAYNNNNRTG 3 cut(s) 521, 750, 794
SacI GAGCTC 1 cut(s) 18
SalI GTCGAC 1 cut(s) 569
SaqAI TTAA 2 cut(s) 68, 426
SatI GCNGC 8 cut(s) 47, 254, 280, 552, 611, 614, 617, 844
Sau3AI GATC 6 cut(s) 357, 390, 562, 620, 687, 776
Sau96I GGNCC 5 cut(s) 4, 258, 318, 464, 481
SchI GAGTC 3 cut(s) 433, 450, 656
ScrFI CCNGG 4 cut(s) 511, 601, 766, 862
SduI GDGCHC 5 cut(s) 18, 150, 380, 497, 518
SetI ASST 8 cut(s) 18, 65, 86, 186, 245, 366, 407, 579
SfaNI GCATC 2 cut(s) 94, 513
SgrAI CRCCGGYG 1 cut(s) 749
SgrDI CGTCGACG 1 cut(s) 569
SinI GGWCC 2 cut(s) 318, 464
SmiMI CAYNNNNRTG 3 cut(s) 521, 750, 794
SphI GCATGC 2 cut(s) 333, 551
Sse9I AATT 1 cut(s) 741
SspMI CTAG 2 cut(s) 188, 822
SstI GAGCTC 1 cut(s) 18
StyD4I CCNGG 4 cut(s) 509, 599, 764, 860
StyI CCWWGG 4 cut(s) 26, 460, 733, 821
TaaI ACNGT 2 cut(s) 194, 694
TaiI ACGT 2 cut(s) 245, 579
TaqI TCGA 6 cut(s) 20, 86, 197, 341, 570, 775
TaqII GACCGA 1 cut(s) 356
TasI AATT 1 cut(s) 741
TauI GCSGC 5 cut(s) 282, 613, 616, 619, 846
TfiI GAWTC 1 cut(s) 22
Tru1I TTAA 2 cut(s) 68, 426
Tru9I TTAA 2 cut(s) 68, 426
TseI GCWGC 3 cut(s) 46, 253, 551
TspDTI ATGAA 1 cut(s) 711
TspGWI ACGGA 2 cut(s) 456, 626
Tth111I GACNNNGTC 1 cut(s) 575
VneI GTGCAC 1 cut(s) 376
VpaK11BI GGWCC 2 cut(s) 318, 464
XceI RCATGY 3 cut(s) 333, 452, 551
XmaJI CCTAGG 1 cut(s) 821
XmiI GTMKAC 1 cut(s) 570
XmnI GAANNNNTTC 1 cut(s) 138
XspI CTAG 2 cut(s) 188, 822
ZraI GACGTC 1 cut(s) 577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.