Rroxscaffold_62G00437990

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000062
OG0000037
Physical Location & Seq
Reverse (-)
161514 .. 180760
19247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_62G00437990.1

Sequence Viewer

Length: 756 bp
ATGCTCACACTCGAACCCTTCTCGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAATGGGGAGCCCGCAGGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGGCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCTCGAGGACGCTTCTCCAGACTACAATTCGGACGCCTTACGACGCCGATTCTCAAGCTGGGCTATTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

251

Amino Acids

27.73

Weight (kDa)

11.47

Isoelectric Point (pI)

65.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
AatII GACGTC 1 cut(s) 248
AccB1I GGYRCC 1 cut(s) 596
AccI GTMKAC 2 cut(s) 123, 239
AccII CGCG 2 cut(s) 236, 445
AclWI GGATC 2 cut(s) 55, 68
AcoI YGGCCR 1 cut(s) 278
AcsI RAATTY 1 cut(s) 493
AcyI GRCGYC 4 cut(s) 245, 597, 663, 673
AfaI GTAC 1 cut(s) 449
AfiI CCNNNNNNNGG 7 cut(s) 57, 179, 276, 509, 606, 607, 608
AflIII ACRYGT 1 cut(s) 118
AgsI TTSAA 3 cut(s) 144, 398, 421
AjnI CCWGG 2 cut(s) 178, 605
AluBI AGCT 2 cut(s) 75, 687
AluI AGCT 2 cut(s) 75, 687
Alw21I GWGCWC 2 cut(s) 50, 187
Alw26I GTCTC 3 cut(s) 202, 252, 470
Alw44I GTGCAC 1 cut(s) 46
AlwI GGATC 2 cut(s) 55, 68
Ama87I CYCGRG 3 cut(s) 269, 310, 632
AoxI GGCC 4 cut(s) 150, 170, 278, 368
ApaLI GTGCAC 1 cut(s) 46
ApeKI GCWGC 2 cut(s) 220, 513
ApoI RAATTY 1 cut(s) 493
AspLEI GCGC 5 cut(s) 85, 216, 361, 547, 599
AspS9I GGNCC 7 cut(s) 133, 150, 301, 325, 369, 564, 623
AsuC2I CCSGG 5 cut(s) 270, 271, 568, 621, 699
AsuHPI GGTGA 2 cut(s) 92, 577
AvaI CYCGRG 3 cut(s) 269, 310, 632
AvaII GGWCC 5 cut(s) 133, 301, 325, 564, 623
BaeGI GKGCMC 2 cut(s) 50, 573
BamHI GGATCC 1 cut(s) 60
BanI GGYRCC 1 cut(s) 596
BanII GRGCYC 2 cut(s) 166, 583
BauI CACGAG 1 cut(s) 549
Bbv12I GWGCWC 2 cut(s) 50, 187
BbvI GCAGC 2 cut(s) 207, 500
BccI CCATC 1 cut(s) 381
BceAI ACGGC 3 cut(s) 157, 227, 695
BcgI CGANNNNNNTGC 2 cut(s) 103, 137
BciT130I CCWGG 2 cut(s) 180, 607
BcnI CCSGG 5 cut(s) 270, 271, 568, 621, 699
BcoDI GTCTC 3 cut(s) 202, 252, 470
BfoI RGCGCY 2 cut(s) 548, 600
BglI GCCNNNNNGGC 1 cut(s) 211
BisI GCNGC 5 cut(s) 221, 281, 284, 287, 514
BlsI GCNGC 5 cut(s) 222, 282, 285, 288, 515
Bme1390I CCNGG 7 cut(s) 180, 270, 271, 568, 607, 621, 699
Bme18I GGWCC 5 cut(s) 133, 301, 325, 564, 623
BmeT110I CYCGRG 3 cut(s) 269, 310, 632
BmgT120I GGNCC 7 cut(s) 133, 150, 301, 325, 369, 564, 623
BmiI GGNNCC 5 cut(s) 62, 163, 371, 565, 598
BmrFI CCNGG 7 cut(s) 180, 270, 271, 568, 607, 621, 699
BmsI GCATC 2 cut(s) 182, 370
BpmI CTGGAG 1 cut(s) 630
BpuEI CTTGAG 1 cut(s) 667
BpuMI CCSGG 5 cut(s) 270, 271, 568, 621, 699
BsaHI GRCGYC 4 cut(s) 245, 597, 663, 673
BsaI GGTCTC 1 cut(s) 470
BsaJI CCNNGG 6 cut(s) 129, 251, 269, 354, 484, 606
BsaXI ACNNNNNCTCC 2 cut(s) 232, 262
Bsc4I CCNNNNNNNGG 7 cut(s) 57, 179, 276, 509, 606, 607, 608
Bse118I RCCGGY 2 cut(s) 327, 366
BseBI CCWGG 2 cut(s) 180, 607
BseDI CCNNGG 6 cut(s) 129, 251, 269, 354, 484, 606
BseGI GGATG 2 cut(s) 346, 373
BseLI CCNNNNNNNGG 7 cut(s) 57, 179, 276, 509, 606, 607, 608
BseSI GKGCMC 2 cut(s) 50, 573
BseXI GCAGC 2 cut(s) 207, 500
BseYI CCCAGC 1 cut(s) 687
Bsh1236I CGCG 2 cut(s) 236, 445
Bsh1285I CGRYCG 2 cut(s) 40, 354
BshFI GGCC 4 cut(s) 152, 172, 280, 370
BshNI GGYRCC 1 cut(s) 596
BsiEI CGRYCG 2 cut(s) 40, 354
BsiHKAI GWGCWC 2 cut(s) 50, 187
BsiHKCI CYCGRG 3 cut(s) 269, 310, 632
BsiSI CCGG 6 cut(s) 270, 328, 367, 567, 621, 699
BslFI GGGAC 1 cut(s) 624
BslI CCNNNNNNNGG 7 cut(s) 57, 179, 276, 509, 606, 607, 608
BsmAI GTCTC 3 cut(s) 202, 252, 470
BsmBI CGTCTC 2 cut(s) 202, 252
BsmFI GGGAC 1 cut(s) 624
BsmI GAATGC 1 cut(s) 516
BsnI GGCC 4 cut(s) 152, 172, 280, 370
Bso31I GGTCTC 1 cut(s) 470
BsoBI CYCGRG 3 cut(s) 269, 310, 632
Bsp1286I GDGCHC 5 cut(s) 50, 166, 187, 573, 583
Bsp143I GATC 3 cut(s) 27, 60, 231
BspANI GGCC 4 cut(s) 152, 172, 280, 370
BspFNI CGCG 2 cut(s) 236, 445
BspLI GGNNCC 5 cut(s) 62, 163, 371, 565, 598
BspPI GGATC 2 cut(s) 55, 68
BspT107I GGYRCC 1 cut(s) 596
BspTNI GGTCTC 1 cut(s) 470
BsrFI RCCGGY 2 cut(s) 327, 366
BssAI RCCGGY 2 cut(s) 327, 366
BssECI CCNNGG 6 cut(s) 129, 251, 269, 354, 484, 606
BssMI GATC 3 cut(s) 27, 60, 231
BssNI GRCGYC 4 cut(s) 245, 597, 663, 673
BssSI CACGAG 1 cut(s) 549
BssT1I CCWWGG 2 cut(s) 129, 484
Bst2BI CACGAG 1 cut(s) 549
Bst2UI CCWGG 2 cut(s) 180, 607
Bst4CI ACNGT 2 cut(s) 301, 340
BstACI GRCGYC 4 cut(s) 245, 597, 663, 673
BstC8I GCNNGC 7 cut(s) 166, 170, 187, 203, 218, 368, 708
BstDEI CTNAG 1 cut(s) 717
BstDSI CCRYGG 1 cut(s) 251
BstF5I GGATG 2 cut(s) 346, 373
BstFNI CGCG 2 cut(s) 236, 445
BstH2I RGCGCY 2 cut(s) 548, 600
BstHHI GCGC 5 cut(s) 85, 216, 361, 547, 599
BstKTI GATC 3 cut(s) 30, 63, 234
BstMAI GTCTC 3 cut(s) 202, 252, 470
BstMBI GATC 3 cut(s) 27, 60, 231
BstMCI CGRYCG 2 cut(s) 40, 354
BstMWI GCNNNNNNNGC 7 cut(s) 211, 220, 280, 286, 367, 376, 544
BstNI CCWGG 2 cut(s) 180, 607
BstNSI RCATGY 2 cut(s) 122, 220
BstSCI CCNGG 7 cut(s) 178, 268, 269, 566, 605, 619, 697
BstSLI GKGCMC 2 cut(s) 50, 573
BstUI CGCG 2 cut(s) 236, 445
BstV1I GCAGC 2 cut(s) 207, 500
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
BsuRI GGCC 4 cut(s) 152, 172, 280, 370
BtgI CCRYGG 1 cut(s) 251
BtgZI GCGATG 1 cut(s) 347
BtsCI GGATG 2 cut(s) 346, 373
Cac8I GCNNGC 7 cut(s) 166, 170, 187, 203, 218, 368, 708
CfoI GCGC 5 cut(s) 85, 216, 361, 547, 599
Cfr10I RCCGGY 2 cut(s) 327, 366
Cfr13I GGNCC 7 cut(s) 133, 150, 301, 325, 369, 564, 623
Cfr9I CCCGGG 1 cut(s) 269
CpoI CGGWCCG 2 cut(s) 325, 623
CseI GACGC 4 cut(s) 225, 647, 671, 681
Csp6I GTAC 1 cut(s) 448
CspI CGGWCCG 2 cut(s) 325, 623
CviAII CATG 3 cut(s) 119, 217, 229
CviQI GTAC 1 cut(s) 448
DdeI CTNAG 1 cut(s) 717
DinI GGCGCC 1 cut(s) 598
DpnI GATC 3 cut(s) 29, 62, 233
DpnII GATC 3 cut(s) 27, 60, 231
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 1 cut(s) 278
EciI GGCGGA 2 cut(s) 338, 615
Eco130I CCWWGG 2 cut(s) 129, 484
Eco24I GRGCYC 2 cut(s) 166, 583
Eco31I GGTCTC 1 cut(s) 470
Eco47I GGWCC 5 cut(s) 133, 301, 325, 564, 623
Eco88I CYCGRG 3 cut(s) 269, 310, 632
EcoRII CCWGG 2 cut(s) 178, 605
EcoT14I CCWWGG 2 cut(s) 129, 484
EcoT38I GRGCYC 2 cut(s) 166, 583
EgeI GGCGCC 1 cut(s) 598
EheI GGCGCC 1 cut(s) 598
ErhI CCWWGG 2 cut(s) 129, 484
Esp3I CGTCTC 2 cut(s) 202, 252
FaeI CATG 3 cut(s) 122, 220, 232
FaiI YATR 5 cut(s) 120, 218, 230, 259, 594
FaqI GGGAC 1 cut(s) 624
FatI CATG 3 cut(s) 118, 216, 228
FauI CCCGC 3 cut(s) 59, 72, 173
FblI GTMKAC 2 cut(s) 123, 239
Fnu4HI GCNGC 5 cut(s) 221, 281, 284, 287, 514
FokI GGATG 2 cut(s) 333, 360
FriOI GRGCYC 2 cut(s) 166, 583
Fsp4HI GCNGC 5 cut(s) 221, 281, 284, 287, 514
GlaI GCGC 5 cut(s) 84, 215, 360, 546, 598
GluI GCNGC 5 cut(s) 221, 281, 284, 287, 514
GsaI CCCAGC 1 cut(s) 691
GsuI CTGGAG 1 cut(s) 630
HaeII RGCGCY 2 cut(s) 548, 600
HaeIII GGCC 4 cut(s) 152, 172, 280, 370
HapII CCGG 6 cut(s) 270, 328, 367, 567, 621, 699
HgaI GACGC 4 cut(s) 225, 647, 671, 681
HhaI GCGC 5 cut(s) 85, 216, 361, 547, 599
Hin1I GRCGYC 4 cut(s) 245, 597, 663, 673
Hin1II CATG 3 cut(s) 122, 220, 232
Hin6I GCGC 5 cut(s) 83, 214, 359, 545, 597
HinP1I GCGC 5 cut(s) 83, 214, 359, 545, 597
HincII GTYRAC 3 cut(s) 108, 124, 240
HindII GTYRAC 3 cut(s) 108, 124, 240
HinfI GANTC 7 cut(s) 109, 125, 313, 410, 533, 678, 723
HpaII CCGG 6 cut(s) 270, 328, 367, 567, 621, 699
HphI GGTGA 2 cut(s) 92, 577
Hpy166II GTNNAC 5 cut(s) 48, 108, 124, 240, 304
Hpy188I TCNGA 2 cut(s) 351, 661
Hpy188III TCNNGA 5 cut(s) 22, 144, 387, 632, 647
Hpy8I GTNNAC 5 cut(s) 48, 108, 124, 240, 304
Hpy99I CGWCG 4 cut(s) 241, 244, 247, 675
HpyAV CCTTC 2 cut(s) 28, 612
HpyCH4III ACNGT 2 cut(s) 301, 340
HpyCH4IV ACGT 1 cut(s) 245
HpyCH4V TGCA 2 cut(s) 48, 516
HpyF10VI GCNNNNNNNGC 7 cut(s) 211, 220, 280, 286, 367, 376, 544
HpyF3I CTNAG 1 cut(s) 717
HpySE526I ACGT 1 cut(s) 245
Hsp92I GRCGYC 4 cut(s) 245, 597, 663, 673
Hsp92II CATG 3 cut(s) 122, 220, 232
HspAI GCGC 5 cut(s) 83, 214, 359, 545, 597
KasI GGCGCC 1 cut(s) 596
KroI GCCGGC 1 cut(s) 366
KroNI GCCGGC 1 cut(s) 368
Kzo9I GATC 3 cut(s) 27, 60, 231
LmnI GCTCC 2 cut(s) 161, 182
Lsp1109I GCAGC 2 cut(s) 207, 500
LweI GCATC 2 cut(s) 182, 370
MaeII ACGT 1 cut(s) 245
MaeIII GTNAC 4 cut(s) 174, 295, 334, 712
MalI GATC 3 cut(s) 29, 62, 233
MboI GATC 3 cut(s) 27, 60, 231
MboII GAAGA 1 cut(s) 37
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 5 cut(s) 50, 166, 187, 573, 583
MluCI AATT 3 cut(s) 392, 493, 655
Mly113I GGCGCC 1 cut(s) 597
MlyI GAGTC 5 cut(s) 103, 119, 322, 404, 527
MmeI TCCRAC 1 cut(s) 374
MnlI CCTC 8 cut(s) 349, 394, 451, 558, 599, 628, 639, 754
MroNI GCCGGC 1 cut(s) 366
MseI TTAA 1 cut(s) 96
MslI CAYNNNNRTG 1 cut(s) 190
MspI CCGG 6 cut(s) 270, 328, 367, 567, 621, 699
MspR9I CCNGG 7 cut(s) 180, 270, 271, 568, 607, 621, 699
Mva1269I GAATGC 1 cut(s) 516
MvaI CCWGG 2 cut(s) 180, 607
MvnI CGCG 2 cut(s) 236, 445
MwoI GCNNNNNNNGC 7 cut(s) 211, 220, 280, 286, 367, 376, 544
NaeI GCCGGC 1 cut(s) 368
NarI GGCGCC 1 cut(s) 597
NciI CCSGG 5 cut(s) 270, 271, 568, 621, 699
NdeII GATC 3 cut(s) 27, 60, 231
NgoMIV GCCGGC 1 cut(s) 366
NlaIII CATG 3 cut(s) 122, 220, 232
NlaIV GGNNCC 5 cut(s) 62, 163, 371, 565, 598
NmeAIII GCCGAG 1 cut(s) 231
NmuCI GTSAC 1 cut(s) 334
NspI RCATGY 2 cut(s) 122, 220
PaeI GCATGC 1 cut(s) 220
PaeR7I CTCGAG 1 cut(s) 632
PciI ACATGT 1 cut(s) 118
PcsI WCGNNNNNNNCGW 1 cut(s) 193
PctI GAATGC 1 cut(s) 516
PdiI GCCGGC 1 cut(s) 368
PfeI GAWTC 2 cut(s) 678, 723
PflFI GACNNNGTC 2 cut(s) 244, 562
PkrI GCNGC 5 cut(s) 222, 282, 285, 288, 515
PleI GAGTC 5 cut(s) 103, 119, 321, 404, 527
PluTI GGCGCC 1 cut(s) 600
PpsI GAGTC 5 cut(s) 103, 119, 321, 404, 527
PscI ACATGT 1 cut(s) 118
Psp6I CCWGG 2 cut(s) 178, 605
PspFI CCCAGC 1 cut(s) 687
PspGI CCWGG 2 cut(s) 178, 605
PspN4I GGNNCC 5 cut(s) 62, 163, 371, 565, 598
PspPI GGNCC 7 cut(s) 133, 150, 301, 325, 369, 564, 623
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 2 cut(s) 244, 562
RsaI GTAC 1 cut(s) 449
RsaNI GTAC 1 cut(s) 448
RseI CAYNNNNRTG 1 cut(s) 190
Rsr2I CGGWCCG 2 cut(s) 325, 623
RsrII CGGWCCG 2 cut(s) 325, 623
SalI GTCGAC 2 cut(s) 122, 238
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 5 cut(s) 221, 281, 284, 287, 514
Sau3AI GATC 3 cut(s) 27, 60, 231
Sau96I GGNCC 7 cut(s) 133, 150, 301, 325, 369, 564, 623
SchI GAGTC 5 cut(s) 103, 119, 322, 404, 527
ScrFI CCNGG 7 cut(s) 180, 270, 271, 568, 607, 621, 699
SduI GDGCHC 5 cut(s) 50, 166, 187, 573, 583
SetI ASST 4 cut(s) 36, 77, 248, 689
SfaNI GCATC 2 cut(s) 182, 370
SfoI GGCGCC 1 cut(s) 598
Sfr274I CTCGAG 1 cut(s) 632
SgrDI CGTCGACG 1 cut(s) 238
SinI GGWCC 5 cut(s) 133, 301, 325, 564, 623
SlaI CTCGAG 1 cut(s) 632
SmaI CCCGGG 1 cut(s) 271
SmiMI CAYNNNNRTG 1 cut(s) 190
SmlI CTYRAG 2 cut(s) 632, 682
SmoI CTYRAG 2 cut(s) 632, 682
SphI GCATGC 1 cut(s) 220
SrfI GCCCGGGC 1 cut(s) 271
Sse9I AATT 3 cut(s) 392, 493, 655
SspDI GGCGCC 1 cut(s) 596
StyD4I CCNGG 7 cut(s) 178, 268, 269, 566, 605, 619, 697
StyI CCWWGG 2 cut(s) 129, 484
TaaI ACNGT 2 cut(s) 301, 340
TaiI ACGT 1 cut(s) 248
TaqI TCGA 6 cut(s) 12, 23, 123, 239, 316, 633
TaqII GACCGA 3 cut(s) 26, 368, 452
TasI AATT 3 cut(s) 392, 493, 655
TauI GCSGC 3 cut(s) 283, 286, 289
TfiI GAWTC 2 cut(s) 678, 723
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TseFI GTSAC 1 cut(s) 334
TseI GCWGC 2 cut(s) 220, 513
Tsp45I GTSAC 1 cut(s) 334
TspDTI ATGAA 1 cut(s) 421
TspGWI ACGGA 3 cut(s) 125, 283, 505
TspMI CCCGGG 1 cut(s) 269
Tth111I GACNNNGTC 2 cut(s) 244, 562
VneI GTGCAC 1 cut(s) 46
VpaK11BI GGWCC 5 cut(s) 133, 301, 325, 564, 623
XapI RAATTY 1 cut(s) 493
XceI RCATGY 2 cut(s) 122, 220
XhoI CTCGAG 1 cut(s) 632
XmaI CCCGGG 1 cut(s) 269
XmiI GTMKAC 2 cut(s) 123, 239
ZraI GACGTC 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.