Rroxscaffold_26G00447820

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000026
OG0000037
Physical Location & Seq
Reverse (-)
67698 .. 69159
1462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_26G00447820.1

Sequence Viewer

Length: 918 bp
ATGTGCAAGTGCCGTTCACATGGAACCTTTCCCTCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACAAGATGCTGCACGACGGCCGCTCCGCCCGGGCTCACGCCCCAGGTTTTGCAGCGACCGCGCGCCCTCCCTACTCATCGGGGCACGGCACTTGCCCCCCGACGGCCGGGCATGCTCACACTCGAACCCTTCTCGGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCGTTGACTCGCACACATGTCGGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAATGGGAGCCGCGCAGGCCGTTACCGGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCGTGCGCCTACCATGATCGCGTCGACGACGTCTCTCCACGGGCATATCAACAGCCGGGCTTTGGCCGCCGCCGCGATCCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCCACATCCGAGGAGGCGCATCGCCGGCCCCATCCGCTTCCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACGGCGCCTCGTGGTGCGACGGGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCCTTCCGGGGGACTTGTTCCCGGTCCGCCTGCGAGGACGCTTCTCCGGACTACAATTCGGACGCCTTACGACGCCGGATTCTCGGCTGGGCTATTCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

305

Amino Acids

34.2

Weight (kDa)

11.09

Isoelectric Point (pI)

69.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 319
AatII GACGTC 1 cut(s) 435
AccB1I GGYRCC 2 cut(s) 729, 782
AccBSI CCGCTC 1 cut(s) 100
AccI GTMKAC 1 cut(s) 426
AccII CGCG 7 cut(s) 138, 140, 354, 404, 423, 477, 631
AccIII TCCGGA 1 cut(s) 832
AclWI GGATC 3 cut(s) 243, 256, 473
AcoI YGGCCR 3 cut(s) 95, 181, 466
AcsI RAATTY 1 cut(s) 678
AcyI GRCGYC 5 cut(s) 432, 730, 783, 849, 859
AfaI GTAC 1 cut(s) 635
AflIII ACRYGT 1 cut(s) 305
AgsI TTSAA 5 cut(s) 48, 62, 332, 584, 607
AjnI CCWGG 1 cut(s) 119
AluBI AGCT 1 cut(s) 263
AluI AGCT 1 cut(s) 263
Alw21I GWGCWC 2 cut(s) 239, 375
Alw26I GTCTC 3 cut(s) 390, 439, 656
Alw44I GTGCAC 1 cut(s) 235
AlwI GGATC 3 cut(s) 243, 256, 473
Ama87I CYCGRG 2 cut(s) 106, 499
Aor13HI TCCGGA 1 cut(s) 832
AoxI GGCC 7 cut(s) 41, 95, 181, 338, 358, 466, 557
ApaLI GTGCAC 1 cut(s) 235
ApeKI GCWGC 3 cut(s) 86, 129, 698
ApoI RAATTY 1 cut(s) 678
AspLEI GCGC 9 cut(s) 140, 142, 273, 356, 404, 410, 550, 732, 785
AspS9I GGNCC 7 cut(s) 321, 338, 490, 514, 558, 750, 810
AsuC2I CCSGG 8 cut(s) 107, 108, 185, 368, 459, 754, 794, 808
AsuHPI GGTGA 2 cut(s) 280, 763
AvaI CYCGRG 2 cut(s) 106, 499
AvaII GGWCC 5 cut(s) 321, 490, 514, 750, 810
BaeGI GKGCMC 3 cut(s) 163, 239, 759
BamHI GGATCC 1 cut(s) 248
BanI GGYRCC 2 cut(s) 729, 782
BanII GRGCYC 2 cut(s) 113, 769
BauI CACGAG 1 cut(s) 734
Bbv12I GWGCWC 2 cut(s) 239, 375
BbvI GCAGC 3 cut(s) 73, 141, 685
BccI CCATC 1 cut(s) 570
BceAI ACGGC 8 cut(s) 110, 179, 196, 345, 415, 643, 743, 880
BcgI CGANNNNNNTGC 2 cut(s) 290, 324
BciT130I CCWGG 1 cut(s) 121
BcnI CCSGG 8 cut(s) 107, 108, 185, 368, 459, 754, 794, 808
BcoDI GTCTC 3 cut(s) 390, 439, 656
BfoI RGCGCY 2 cut(s) 733, 786
BglI GCCNNNNNGGC 2 cut(s) 357, 399
BisI GCNGC 8 cut(s) 87, 98, 130, 352, 469, 472, 475, 699
BlsI GCNGC 8 cut(s) 88, 99, 131, 353, 470, 473, 476, 700
Bme1390I CCNGG 9 cut(s) 107, 108, 121, 185, 368, 459, 754, 794, 808
Bme18I GGWCC 5 cut(s) 321, 490, 514, 750, 810
BmeT110I CYCGRG 2 cut(s) 106, 499
BmgT120I GGNCC 7 cut(s) 321, 338, 490, 514, 558, 750, 810
BmiI GGNNCC 7 cut(s) 25, 250, 350, 560, 731, 751, 784
BmrFI CCNGG 9 cut(s) 107, 108, 121, 185, 368, 459, 754, 794, 808
BmsI GCATC 3 cut(s) 73, 370, 559
BoxI GACNNNNGTC 1 cut(s) 748
BpuMI CCSGG 8 cut(s) 107, 108, 185, 368, 459, 754, 794, 808
BsaHI GRCGYC 5 cut(s) 432, 730, 783, 849, 859
BsaI GGTCTC 1 cut(s) 656
BsaJI CCNNGG 7 cut(s) 106, 119, 317, 440, 540, 669, 793
BsaWI WCCGGW 2 cut(s) 832, 883
BsaXI ACNNNNNCTCC 2 cut(s) 84, 114
Bse118I RCCGGY 2 cut(s) 516, 555
BseAI TCCGGA 1 cut(s) 832
BseBI CCWGG 1 cut(s) 121
BseDI CCNNGG 7 cut(s) 106, 119, 317, 440, 540, 669, 793
BseGI GGATG 2 cut(s) 536, 562
BsePI GCGCGC 1 cut(s) 138
BseRI GAGGAG 1 cut(s) 557
BseSI GKGCMC 3 cut(s) 163, 239, 759
BseX3I CGGCCG 2 cut(s) 95, 181
BseXI GCAGC 3 cut(s) 73, 141, 685
BseYI CCCAGC 1 cut(s) 873
BsgI GTGCAG 1 cut(s) 72
Bsh1236I CGCG 7 cut(s) 138, 140, 354, 404, 423, 477, 631
Bsh1285I CGRYCG 4 cut(s) 98, 136, 184, 229
BshFI GGCC 7 cut(s) 43, 97, 183, 340, 360, 468, 559
BshNI GGYRCC 2 cut(s) 729, 782
BsiEI CGRYCG 4 cut(s) 98, 136, 184, 229
BsiHKAI GWGCWC 2 cut(s) 239, 375
BsiHKCI CYCGRG 2 cut(s) 106, 499
BslFI GGGAC 1 cut(s) 811
BsmAI GTCTC 3 cut(s) 390, 439, 656
BsmBI CGTCTC 2 cut(s) 390, 439
BsmFI GGGAC 1 cut(s) 811
BsmI GAATGC 1 cut(s) 701
BsnI GGCC 7 cut(s) 43, 97, 183, 340, 360, 468, 559
Bso31I GGTCTC 1 cut(s) 656
BsoBI CYCGRG 2 cut(s) 106, 499
Bsp1286I GDGCHC 6 cut(s) 113, 163, 239, 375, 759, 769
Bsp13I TCCGGA 1 cut(s) 832
Bsp143I GATC 4 cut(s) 216, 248, 418, 478
BspANI GGCC 7 cut(s) 43, 97, 183, 340, 360, 468, 559
BspEI TCCGGA 1 cut(s) 832
BspFNI CGCG 7 cut(s) 138, 140, 354, 404, 423, 477, 631
BspLI GGNNCC 7 cut(s) 25, 250, 350, 560, 731, 751, 784
BspPI GGATC 3 cut(s) 243, 256, 473
BspT107I GGYRCC 2 cut(s) 729, 782
BspTNI GGTCTC 1 cut(s) 656
BsrBI CCGCTC 1 cut(s) 100
BsrFI RCCGGY 2 cut(s) 516, 555
BssAI RCCGGY 2 cut(s) 516, 555
BssECI CCNNGG 7 cut(s) 106, 119, 317, 440, 540, 669, 793
BssHII GCGCGC 1 cut(s) 138
BssMI GATC 4 cut(s) 216, 248, 418, 478
BssNI GRCGYC 5 cut(s) 432, 730, 783, 849, 859
BssSI CACGAG 1 cut(s) 734
BssT1I CCWWGG 2 cut(s) 317, 669
Bst2BI CACGAG 1 cut(s) 734
Bst2UI CCWGG 1 cut(s) 121
Bst4CI ACNGT 3 cut(s) 292, 490, 529
Bst6I CTCTTC 1 cut(s) 42
BstACI GRCGYC 5 cut(s) 432, 730, 783, 849, 859
BstC8I GCNNGC 9 cut(s) 140, 190, 358, 375, 391, 406, 557, 817, 893
BstDEI CTNAG 1 cut(s) 902
BstDSI CCRYGG 1 cut(s) 440
BstF5I GGATG 2 cut(s) 536, 562
BstFNI CGCG 7 cut(s) 138, 140, 354, 404, 423, 477, 631
BstH2I RGCGCY 2 cut(s) 733, 786
BstHHI GCGC 9 cut(s) 140, 142, 273, 356, 404, 410, 550, 732, 785
BstKTI GATC 4 cut(s) 219, 251, 421, 481
BstMAI GTCTC 3 cut(s) 390, 439, 656
BstMBI GATC 4 cut(s) 216, 248, 418, 478
BstMCI CGRYCG 4 cut(s) 98, 136, 184, 229
BstMWI GCNNNNNNNGC 9 cut(s) 135, 189, 357, 399, 468, 474, 556, 565, 729
BstNI CCWGG 1 cut(s) 121
BstNSI RCATGY 2 cut(s) 192, 309
BstPAI GACNNNNGTC 1 cut(s) 748
BstSCI CCNGG 9 cut(s) 105, 106, 119, 183, 366, 457, 752, 792, 806
BstSLI GKGCMC 3 cut(s) 163, 239, 759
BstUI CGCG 7 cut(s) 138, 140, 354, 404, 423, 477, 631
BstV1I GCAGC 3 cut(s) 73, 141, 685
BstX2I RGATCY 1 cut(s) 248
BstYI RGATCY 1 cut(s) 248
BstZI CGGCCG 2 cut(s) 95, 181
BsuRI GGCC 7 cut(s) 43, 97, 183, 340, 360, 468, 559
BtgI CCRYGG 1 cut(s) 440
BtgZI GCGATG 1 cut(s) 536
BtsCI GGATG 2 cut(s) 536, 562
Cac8I GCNNGC 9 cut(s) 140, 190, 358, 375, 391, 406, 557, 817, 893
CfoI GCGC 9 cut(s) 140, 142, 273, 356, 404, 410, 550, 732, 785
Cfr10I RCCGGY 2 cut(s) 516, 555
Cfr13I GGNCC 7 cut(s) 321, 338, 490, 514, 558, 750, 810
Cfr9I CCCGGG 1 cut(s) 106
CpoI CGGWCCG 2 cut(s) 514, 810
CseI GACGC 4 cut(s) 412, 833, 857, 867
Csp6I GTAC 1 cut(s) 634
CspI CGGWCCG 2 cut(s) 514, 810
CviAII CATG 4 cut(s) 20, 189, 306, 416
CviQI GTAC 1 cut(s) 634
DdeI CTNAG 1 cut(s) 902
DinI GGCGCC 2 cut(s) 731, 784
DpnI GATC 4 cut(s) 218, 250, 420, 480
DpnII GATC 4 cut(s) 216, 248, 418, 478
DrdI GACNNNNNNGTC 1 cut(s) 319
DseDI GACNNNNNNGTC 1 cut(s) 319
EaeI YGGCCR 3 cut(s) 95, 181, 466
EagI CGGCCG 2 cut(s) 95, 181
Eam1104I CTCTTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 42
EciI GGCGGA 3 cut(s) 92, 527, 802
EclXI CGGCCG 2 cut(s) 95, 181
Eco130I CCWWGG 2 cut(s) 317, 669
Eco24I GRGCYC 2 cut(s) 113, 769
Eco31I GGTCTC 1 cut(s) 656
Eco47I GGWCC 5 cut(s) 321, 490, 514, 750, 810
Eco52I CGGCCG 2 cut(s) 95, 181
Eco88I CYCGRG 2 cut(s) 106, 499
EcoRII CCWGG 1 cut(s) 119
EcoT14I CCWWGG 2 cut(s) 317, 669
EcoT38I GRGCYC 2 cut(s) 113, 769
EgeI GGCGCC 2 cut(s) 731, 784
EheI GGCGCC 2 cut(s) 731, 784
ErhI CCWWGG 2 cut(s) 317, 669
Esp3I CGTCTC 2 cut(s) 390, 439
FaeI CATG 4 cut(s) 23, 192, 309, 419
FaiI YATR 6 cut(s) 21, 190, 307, 417, 448, 780
FaqI GGGAC 1 cut(s) 811
FatI CATG 4 cut(s) 19, 188, 305, 415
FauI CCCGC 2 cut(s) 248, 260
FblI GTMKAC 1 cut(s) 426
Fnu4HI GCNGC 8 cut(s) 87, 98, 130, 352, 469, 472, 475, 699
FokI GGATG 2 cut(s) 523, 549
FriOI GRGCYC 2 cut(s) 113, 769
Fsp4HI GCNGC 8 cut(s) 87, 98, 130, 352, 469, 472, 475, 699
GlaI GCGC 9 cut(s) 139, 141, 272, 355, 403, 409, 549, 731, 784
GluI GCNGC 8 cut(s) 87, 98, 130, 352, 469, 472, 475, 699
GsaI CCCAGC 1 cut(s) 877
HaeII RGCGCY 2 cut(s) 733, 786
HaeIII GGCC 7 cut(s) 43, 97, 183, 340, 360, 468, 559
HgaI GACGC 4 cut(s) 412, 833, 857, 867
HhaI GCGC 9 cut(s) 140, 142, 273, 356, 404, 410, 550, 732, 785
Hin1I GRCGYC 5 cut(s) 432, 730, 783, 849, 859
Hin1II CATG 4 cut(s) 23, 192, 309, 419
Hin6I GCGC 9 cut(s) 138, 140, 271, 354, 402, 408, 548, 730, 783
HinP1I GCGC 9 cut(s) 138, 140, 271, 354, 402, 408, 548, 730, 783
HincII GTYRAC 2 cut(s) 295, 427
HindII GTYRAC 2 cut(s) 295, 427
HinfI GANTC 7 cut(s) 296, 313, 502, 596, 718, 865, 908
HphI GGTGA 2 cut(s) 280, 763
Hpy166II GTNNAC 5 cut(s) 17, 237, 295, 427, 493
Hpy188I TCNGA 4 cut(s) 213, 312, 541, 847
Hpy188III TCNNGA 2 cut(s) 332, 833
Hpy8I GTNNAC 5 cut(s) 17, 237, 295, 427, 493
Hpy99I CGWCG 8 cut(s) 96, 182, 428, 431, 434, 729, 747, 861
HpyAV CCTTC 3 cut(s) 54, 216, 799
HpyCH4III ACNGT 3 cut(s) 292, 490, 529
HpyCH4IV ACGT 1 cut(s) 432
HpyCH4V TGCA 5 cut(s) 6, 89, 129, 237, 701
HpyF10VI GCNNNNNNNGC 9 cut(s) 135, 189, 357, 399, 468, 474, 556, 565, 729
HpyF3I CTNAG 1 cut(s) 902
HpySE526I ACGT 1 cut(s) 432
Hsp92I GRCGYC 5 cut(s) 432, 730, 783, 849, 859
Hsp92II CATG 4 cut(s) 23, 192, 309, 419
HspAI GCGC 9 cut(s) 138, 140, 271, 354, 402, 408, 548, 730, 783
KasI GGCGCC 2 cut(s) 729, 782
Kpn2I TCCGGA 1 cut(s) 832
KroI GCCGGC 1 cut(s) 555
KroNI GCCGGC 1 cut(s) 557
Kzo9I GATC 4 cut(s) 216, 248, 418, 478
LmnI GCTCC 3 cut(s) 105, 348, 370
Lsp1109I GCAGC 3 cut(s) 73, 141, 685
LweI GCATC 3 cut(s) 73, 370, 559
MaeII ACGT 1 cut(s) 432
MaeIII GTNAC 4 cut(s) 362, 484, 523, 897
MalI GATC 4 cut(s) 218, 250, 420, 480
MbiI CCGCTC 1 cut(s) 100
MboI GATC 4 cut(s) 216, 248, 418, 478
MboII GAAGA 2 cut(s) 29, 226
MflI RGATCY 1 cut(s) 248
MhlI GDGCHC 6 cut(s) 113, 163, 239, 375, 759, 769
MluCI AATT 3 cut(s) 578, 678, 841
Mly113I GGCGCC 2 cut(s) 730, 783
MlyI GAGTC 5 cut(s) 290, 307, 511, 590, 712
MmeI TCCRAC 1 cut(s) 290
MnlI CCTC 8 cut(s) 43, 154, 535, 538, 637, 743, 785, 814
MroI TCCGGA 1 cut(s) 832
MroNI GCCGGC 1 cut(s) 555
MseI TTAA 1 cut(s) 284
MslI CAYNNNNRTG 1 cut(s) 378
MspR9I CCNGG 9 cut(s) 107, 108, 121, 185, 368, 459, 754, 794, 808
Mva1269I GAATGC 1 cut(s) 701
MvaI CCWGG 1 cut(s) 121
MvnI CGCG 7 cut(s) 138, 140, 354, 404, 423, 477, 631
MwoI GCNNNNNNNGC 9 cut(s) 135, 189, 357, 399, 468, 474, 556, 565, 729
NaeI GCCGGC 1 cut(s) 557
NarI GGCGCC 2 cut(s) 730, 783
NciI CCSGG 8 cut(s) 107, 108, 185, 368, 459, 754, 794, 808
NdeII GATC 4 cut(s) 216, 248, 418, 478
NgoMIV GCCGGC 1 cut(s) 555
NlaIII CATG 4 cut(s) 23, 192, 309, 419
NlaIV GGNNCC 7 cut(s) 25, 250, 350, 560, 731, 751, 784
NmeAIII GCCGAG 2 cut(s) 419, 849
NmuCI GTSAC 1 cut(s) 523
NspI RCATGY 2 cut(s) 192, 309
PaeI GCATGC 1 cut(s) 192
PauI GCGCGC 1 cut(s) 138
PciI ACATGT 1 cut(s) 305
PcsI WCGNNNNNNNCGW 1 cut(s) 381
PctI GAATGC 1 cut(s) 701
PdiI GCCGGC 1 cut(s) 557
PfeI GAWTC 2 cut(s) 865, 908
PflFI GACNNNGTC 1 cut(s) 431
PkrI GCNGC 8 cut(s) 88, 99, 131, 353, 470, 473, 476, 700
PleI GAGTC 5 cut(s) 290, 307, 510, 590, 712
PluTI GGCGCC 2 cut(s) 733, 786
PpsI GAGTC 5 cut(s) 290, 307, 510, 590, 712
PscI ACATGT 1 cut(s) 305
PshAI GACNNNNGTC 1 cut(s) 748
Psp6I CCWGG 1 cut(s) 119
PspFI CCCAGC 1 cut(s) 873
PspGI CCWGG 1 cut(s) 119
PspN4I GGNNCC 7 cut(s) 25, 250, 350, 560, 731, 751, 784
PspPI GGNCC 7 cut(s) 321, 338, 490, 514, 558, 750, 810
PsuI RGATCY 1 cut(s) 248
PsyI GACNNNGTC 1 cut(s) 431
PteI GCGCGC 1 cut(s) 138
RsaI GTAC 1 cut(s) 635
RsaNI GTAC 1 cut(s) 634
RseI CAYNNNNRTG 1 cut(s) 378
Rsr2I CGGWCCG 2 cut(s) 514, 810
RsrII CGGWCCG 2 cut(s) 514, 810
SalI GTCGAC 1 cut(s) 425
SaqAI TTAA 1 cut(s) 284
SatI GCNGC 8 cut(s) 87, 98, 130, 352, 469, 472, 475, 699
Sau3AI GATC 4 cut(s) 216, 248, 418, 478
Sau96I GGNCC 7 cut(s) 321, 338, 490, 514, 558, 750, 810
SchI GAGTC 5 cut(s) 290, 307, 511, 590, 712
ScrFI CCNGG 9 cut(s) 107, 108, 121, 185, 368, 459, 754, 794, 808
SduI GDGCHC 6 cut(s) 113, 163, 239, 375, 759, 769
SetI ASST 5 cut(s) 29, 125, 225, 265, 435
SfaNI GCATC 3 cut(s) 73, 370, 559
SfoI GGCGCC 2 cut(s) 731, 784
SgrDI CGTCGACG 1 cut(s) 425
SinI GGWCC 5 cut(s) 321, 490, 514, 750, 810
SmaI CCCGGG 1 cut(s) 108
SmiMI CAYNNNNRTG 1 cut(s) 378
SphI GCATGC 1 cut(s) 192
SrfI GCCCGGGC 1 cut(s) 108
Sse9I AATT 3 cut(s) 578, 678, 841
SspDI GGCGCC 2 cut(s) 729, 782
SspI AATATT 1 cut(s) 65
StyD4I CCNGG 9 cut(s) 105, 106, 119, 183, 366, 457, 752, 792, 806
StyI CCWWGG 2 cut(s) 317, 669
TaaI ACNGT 3 cut(s) 292, 490, 529
TaiI ACGT 1 cut(s) 435
TaqI TCGA 3 cut(s) 200, 426, 505
TaqII GACCGA 2 cut(s) 215, 638
TasI AATT 3 cut(s) 578, 678, 841
TauI GCSGC 5 cut(s) 100, 354, 471, 474, 477
TfiI GAWTC 2 cut(s) 865, 908
Tru1I TTAA 1 cut(s) 284
Tru9I TTAA 1 cut(s) 284
TseFI GTSAC 1 cut(s) 523
TseI GCWGC 3 cut(s) 86, 129, 698
Tsp45I GTSAC 1 cut(s) 523
TspDTI ATGAA 1 cut(s) 607
TspGWI ACGGA 2 cut(s) 313, 690
TspMI CCCGGG 1 cut(s) 106
Tth111I GACNNNGTC 1 cut(s) 431
VneI GTGCAC 1 cut(s) 235
VpaK11BI GGWCC 5 cut(s) 321, 490, 514, 750, 810
XapI RAATTY 1 cut(s) 678
XceI RCATGY 2 cut(s) 192, 309
XmaI CCCGGG 1 cut(s) 106
XmiI GTMKAC 1 cut(s) 426
ZraI GACGTC 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.