Rroxscaffold_72G00449390

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000072
OG0000037
Physical Location & Seq
Reverse (-)
13255 .. 16184
2930 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_72G00449390.1

Sequence Viewer

Length: 993 bp
ATGGCGCCCCCTTCCAGGGGGACTTGTTCCCGGTCCGCCTCTGAGGACGCTTCTCCAGACTACAATTCGGACGCCTTACGACGCCAGATTCTCAAGCTGGGCTATTCCCGGTTCGCTCGCCGAAACCGAGGTTTGACAACCACCGATTGTCGTGGCGTTGGTCGCCGAGGACTTGGTATTTATGCCAACCGCGTGACTGAGCACACGGGAGGCCATCATCCGTCCCATCCAACTCCCGAGGGGGTTGGGGGGCAACGACGTGTGACGCCCAGGCAGACGTGCCCTCGGCCTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGGACGGCGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCTGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCAGCGTTGAAACATGTTCTCGGGTCGTTCTGCTAGGCAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCCTTTGACAACGCTGGCACCGCGTAGGGAGACCCTGCAACGAGCACAGCAGTCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAGGCATGCCAATGCAAGGGGCACAGGCACTACTACGATGTCCTTCCCCTAACCGAATGGCTCAGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

330

Amino Acids

36.48

Weight (kDa)

10.77

Isoelectric Point (pI)

60.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 799
AccB1I GGYRCC 3 cut(s) 4, 724, 974
AccI GTMKAC 1 cut(s) 965
AccII CGCG 2 cut(s) 192, 730
AciI CCGC 7 cut(s) 36, 190, 451, 476, 612, 624, 728
AclWI GGATC 1 cut(s) 699
AcyI GRCGYC 5 cut(s) 5, 72, 82, 266, 796
AfaI GTAC 2 cut(s) 530, 764
AfiI CCNNNNNNNGG 6 cut(s) 15, 16, 17, 468, 873, 902
AflIII ACRYGT 3 cut(s) 259, 641, 765
AgsI TTSAA 5 cut(s) 318, 434, 496, 638, 788
AjiI CACGTC 2 cut(s) 260, 279
AjnI CCWGG 5 cut(s) 14, 269, 533, 697, 858
AleI CACNNNNGTG 1 cut(s) 519
AluBI AGCT 1 cut(s) 97
AluI AGCT 1 cut(s) 97
Alw21I GWGCWC 3 cut(s) 204, 754, 881
Alw26I GTCTC 3 cut(s) 469, 731, 836
Alw44I GTGCAC 1 cut(s) 877
AlwI GGATC 1 cut(s) 699
Ama87I CYCGRG 3 cut(s) 236, 396, 648
AoxI GGCC 2 cut(s) 211, 287
ApaLI GTGCAC 1 cut(s) 877
AspA2I CCTAGG 1 cut(s) 590
AspLEI GCGC 5 cut(s) 7, 306, 509, 554, 606
AspS9I GGNCC 1 cut(s) 33
AsuC2I CCSGG 3 cut(s) 31, 109, 469
AsuHPI GGTGA 1 cut(s) 451
AvaI CYCGRG 3 cut(s) 236, 396, 648
AvaII GGWCC 1 cut(s) 33
AvrII CCTAGG 1 cut(s) 590
BaeGI GKGCMC 3 cut(s) 284, 881, 910
BanI GGYRCC 3 cut(s) 4, 724, 974
BanII GRGCYC 1 cut(s) 397
BbsI GAAGAC 1 cut(s) 441
Bbv12I GWGCWC 3 cut(s) 204, 754, 881
BccI CCATC 3 cut(s) 222, 234, 321
BceAI ACGGC 1 cut(s) 489
BcgI CGANNNNNNTGC 2 cut(s) 741, 775
BciT130I CCWGG 5 cut(s) 16, 271, 535, 699, 860
BciVI GTATCC 1 cut(s) 847
BcnI CCSGG 3 cut(s) 31, 109, 469
BcoDI GTCTC 3 cut(s) 469, 731, 836
BfaI CTAG 3 cut(s) 591, 662, 771
BfoI RGCGCY 1 cut(s) 8
BfuI GTATCC 1 cut(s) 847
BisI GCNGC 1 cut(s) 612
BlnI CCTAGG 1 cut(s) 590
BlsI GCNGC 1 cut(s) 613
Bme1390I CCNGG 8 cut(s) 16, 31, 109, 271, 469, 535, 699, 860
Bme18I GGWCC 1 cut(s) 33
BmeT110I CYCGRG 3 cut(s) 236, 396, 648
BmgBI CACGTC 2 cut(s) 260, 279
BmgT120I GGNCC 1 cut(s) 33
BmiI GGNNCC 4 cut(s) 6, 726, 865, 976
BmrFI CCNGG 8 cut(s) 16, 31, 109, 271, 469, 535, 699, 860
BmsI GCATC 1 cut(s) 376
BpiI GAAGAC 1 cut(s) 441
BpmI CTGGAG 1 cut(s) 39
Bpu10I CCTNAGC 1 cut(s) 948
BpuEI CTTGAG 1 cut(s) 77
BpuMI CCSGG 3 cut(s) 31, 109, 469
Bsa29I ATCGAT 1 cut(s) 384
BsaHI GRCGYC 5 cut(s) 5, 72, 82, 266, 796
BsaI GGTCTC 1 cut(s) 731
Bsc4I CCNNNNNNNGG 6 cut(s) 15, 16, 17, 468, 873, 902
Bse118I RCCGGY 1 cut(s) 518
Bse1I ACTGG 1 cut(s) 689
BseBI CCWGG 5 cut(s) 16, 271, 535, 699, 860
BseCI ATCGAT 1 cut(s) 384
BseGI GGATG 2 cut(s) 217, 226
BseLI CCNNNNNNNGG 6 cut(s) 15, 16, 17, 468, 873, 902
BseMII CTCAG 3 cut(s) 33, 189, 962
BseNI ACTGG 1 cut(s) 689
BseSI GKGCMC 3 cut(s) 284, 881, 910
BseYI CCCAGC 2 cut(s) 97, 629
Bsh1236I CGCG 2 cut(s) 192, 730
BshFI GGCC 2 cut(s) 213, 289
BshNI GGYRCC 3 cut(s) 4, 724, 974
BshVI ATCGAT 1 cut(s) 384
BsiHKAI GWGCWC 3 cut(s) 204, 754, 881
BsiHKCI CYCGRG 3 cut(s) 236, 396, 648
BsiSI CCGG 4 cut(s) 31, 109, 468, 519
BslFI GGGAC 3 cut(s) 34, 208, 484
BslI CCNNNNNNNGG 6 cut(s) 15, 16, 17, 468, 873, 902
BsmAI GTCTC 3 cut(s) 469, 731, 836
BsmBI CGTCTC 1 cut(s) 469
BsmFI GGGAC 3 cut(s) 34, 208, 484
BsmI GAATGC 1 cut(s) 705
BsnI GGCC 2 cut(s) 213, 289
Bso31I GGTCTC 1 cut(s) 731
BsoBI CYCGRG 3 cut(s) 236, 396, 648
Bsp1286I GDGCHC 6 cut(s) 204, 284, 397, 754, 881, 910
Bsp143I GATC 3 cut(s) 456, 545, 691
BspACI CCGC 7 cut(s) 36, 190, 451, 476, 612, 624, 728
BspANI GGCC 2 cut(s) 213, 289
BspCNI CTCAG 3 cut(s) 34, 190, 961
BspDI ATCGAT 1 cut(s) 384
BspFNI CGCG 2 cut(s) 192, 730
BspLI GGNNCC 4 cut(s) 6, 726, 865, 976
BspPI GGATC 1 cut(s) 699
BspT107I GGYRCC 3 cut(s) 4, 724, 974
BspTNI GGTCTC 1 cut(s) 731
BsrFI RCCGGY 1 cut(s) 518
BsrI ACTGG 1 cut(s) 689
BssAI RCCGGY 1 cut(s) 518
BssMI GATC 3 cut(s) 456, 545, 691
BssNI GRCGYC 5 cut(s) 5, 72, 82, 266, 796
BssT1I CCWWGG 2 cut(s) 502, 590
Bst2UI CCWGG 5 cut(s) 16, 271, 535, 699, 860
Bst4CI ACNGT 2 cut(s) 463, 868
BstACI GRCGYC 5 cut(s) 5, 72, 82, 266, 796
BstC8I GCNNGC 4 cut(s) 118, 556, 723, 893
BstDEI CTNAG 3 cut(s) 42, 198, 948
BstF5I GGATG 2 cut(s) 217, 226
BstFNI CGCG 2 cut(s) 192, 730
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 5 cut(s) 7, 306, 509, 554, 606
BstKTI GATC 3 cut(s) 459, 548, 694
BstMAI GTCTC 3 cut(s) 469, 731, 836
BstMBI GATC 3 cut(s) 456, 545, 691
BstMWI GCNNNNNNNGC 6 cut(s) 162, 303, 310, 482, 515, 727
BstNI CCWGG 5 cut(s) 16, 271, 535, 699, 860
BstNSI RCATGY 3 cut(s) 645, 769, 895
BstSCI CCNGG 8 cut(s) 14, 29, 107, 269, 467, 533, 697, 858
BstSLI GKGCMC 3 cut(s) 284, 881, 910
BstUI CGCG 2 cut(s) 192, 730
BstV2I GAAGAC 1 cut(s) 441
Bsu15I ATCGAT 1 cut(s) 384
BsuI GTATCC 1 cut(s) 847
BsuRI GGCC 2 cut(s) 213, 289
BsuTUI ATCGAT 1 cut(s) 384
BtrI CACGTC 2 cut(s) 260, 279
BtsCI GGATG 2 cut(s) 217, 226
Cac8I GCNNGC 4 cut(s) 118, 556, 723, 893
CfoI GCGC 5 cut(s) 7, 306, 509, 554, 606
Cfr10I RCCGGY 1 cut(s) 518
Cfr13I GGNCC 1 cut(s) 33
ClaI ATCGAT 1 cut(s) 384
CpoI CGGWCCG 1 cut(s) 33
CseI GACGC 4 cut(s) 56, 80, 90, 274
CsiI ACCWGGT 1 cut(s) 697
Csp6I GTAC 2 cut(s) 529, 763
CspI CGGWCCG 1 cut(s) 33
CviAII CATG 3 cut(s) 642, 766, 892
CviJI RGCY 9 cut(s) 97, 102, 213, 289, 297, 395, 611, 820, 947
CviKI_1 RGCY 9 cut(s) 97, 102, 213, 289, 297, 395, 611, 820, 947
CviQI GTAC 2 cut(s) 529, 763
DdeI CTNAG 3 cut(s) 42, 198, 948
DinI GGCGCC 1 cut(s) 6
DpnI GATC 3 cut(s) 458, 547, 693
DpnII GATC 3 cut(s) 456, 545, 691
EciI GGCGGA 2 cut(s) 25, 613
Eco130I CCWWGG 2 cut(s) 502, 590
Eco24I GRGCYC 1 cut(s) 397
Eco31I GGTCTC 1 cut(s) 731
Eco32I GATATC 1 cut(s) 403
Eco47I GGWCC 1 cut(s) 33
Eco88I CYCGRG 3 cut(s) 236, 396, 648
EcoRII CCWGG 5 cut(s) 14, 269, 533, 697, 858
EcoRV GATATC 1 cut(s) 403
EcoT14I CCWWGG 2 cut(s) 502, 590
EcoT38I GRGCYC 1 cut(s) 397
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 502, 590
Esp3I CGTCTC 1 cut(s) 469
FaeI CATG 3 cut(s) 645, 769, 895
FaiI YATR 7 cut(s) 183, 429, 643, 676, 678, 767, 893
FaqI GGGAC 3 cut(s) 34, 208, 484
FatI CATG 3 cut(s) 641, 765, 891
FauI CCCGC 2 cut(s) 458, 469
FauNDI CATATG 1 cut(s) 676
FblI GTMKAC 1 cut(s) 965
Fnu4HI GCNGC 1 cut(s) 612
FokI GGATG 2 cut(s) 204, 213
FriOI GRGCYC 1 cut(s) 397
Fsp4HI GCNGC 1 cut(s) 612
FspBI CTAG 3 cut(s) 591, 662, 771
GlaI GCGC 5 cut(s) 6, 305, 508, 553, 605
GluI GCNGC 1 cut(s) 612
GsaI CCCAGC 2 cut(s) 101, 633
GsuI CTGGAG 1 cut(s) 39
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 2 cut(s) 213, 289
HapII CCGG 4 cut(s) 31, 109, 468, 519
HgaI GACGC 4 cut(s) 56, 80, 90, 274
HhaI GCGC 5 cut(s) 7, 306, 509, 554, 606
Hin1I GRCGYC 5 cut(s) 5, 72, 82, 266, 796
Hin1II CATG 3 cut(s) 645, 769, 895
Hin6I GCGC 5 cut(s) 5, 304, 507, 552, 604
HinP1I GCGC 5 cut(s) 5, 304, 507, 552, 604
HincII GTYRAC 1 cut(s) 966
HindII GTYRAC 1 cut(s) 966
HinfI GANTC 4 cut(s) 88, 322, 339, 416
HpaII CCGG 4 cut(s) 31, 109, 468, 519
HphI GGTGA 1 cut(s) 451
Hpy166II GTNNAC 3 cut(s) 333, 879, 966
Hpy188I TCNGA 3 cut(s) 43, 70, 841
Hpy188III TCNNGA 2 cut(s) 56, 236
Hpy8I GTNNAC 3 cut(s) 333, 879, 966
Hpy99I CGWCG 4 cut(s) 84, 261, 443, 872
HpyAV CCTTC 3 cut(s) 21, 939, 948
HpyCH4III ACNGT 2 cut(s) 463, 868
HpyCH4IV ACGT 4 cut(s) 259, 278, 374, 796
HpyCH4V TGCA 6 cut(s) 345, 568, 745, 807, 879, 901
HpyF10VI GCNNNNNNNGC 6 cut(s) 162, 303, 310, 482, 515, 727
HpyF3I CTNAG 3 cut(s) 42, 198, 948
HpySE526I ACGT 4 cut(s) 259, 278, 374, 796
Hsp92I GRCGYC 5 cut(s) 5, 72, 82, 266, 796
Hsp92II CATG 3 cut(s) 645, 769, 895
HspAI GCGC 5 cut(s) 5, 304, 507, 552, 604
KasI GGCGCC 1 cut(s) 4
Kzo9I GATC 3 cut(s) 456, 545, 691
LweI GCATC 1 cut(s) 376
MabI ACCWGGT 1 cut(s) 697
MaeI CTAG 3 cut(s) 591, 662, 771
MaeII ACGT 4 cut(s) 259, 278, 374, 796
MaeIII GTNAC 2 cut(s) 193, 262
MalI GATC 3 cut(s) 458, 547, 693
MboI GATC 3 cut(s) 456, 545, 691
MboII GAAGA 2 cut(s) 370, 446
MhlI GDGCHC 6 cut(s) 204, 284, 397, 754, 881, 910
MluCI AATT 4 cut(s) 64, 346, 510, 789
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 2 cut(s) 316, 425
MmeI TCCRAC 1 cut(s) 254
MslI CAYNNNNRTG 3 cut(s) 519, 563, 896
MspI CCGG 4 cut(s) 31, 109, 468, 519
MspR9I CCNGG 8 cut(s) 16, 31, 109, 271, 469, 535, 699, 860
Mva1269I GAATGC 1 cut(s) 705
MvaI CCWGG 5 cut(s) 16, 271, 535, 699, 860
MvnI CGCG 2 cut(s) 192, 730
MwoI GCNNNNNNNGC 6 cut(s) 162, 303, 310, 482, 515, 727
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 3 cut(s) 31, 109, 469
NdeI CATATG 1 cut(s) 676
NdeII GATC 3 cut(s) 456, 545, 691
NlaIII CATG 3 cut(s) 645, 769, 895
NlaIV GGNNCC 4 cut(s) 6, 726, 865, 976
NmeAIII GCCGAG 3 cut(s) 191, 265, 437
NmuCI GTSAC 2 cut(s) 193, 262
NspI RCATGY 3 cut(s) 645, 769, 895
OliI CACNNNNGTG 1 cut(s) 519
PaeI GCATGC 1 cut(s) 895
PciI ACATGT 2 cut(s) 641, 765
PcsI WCGNNNNNNNCGW 1 cut(s) 124
PctI GAATGC 1 cut(s) 705
PfeI GAWTC 2 cut(s) 88, 339
PfoI TCCNGGA 1 cut(s) 467
PkrI GCNGC 1 cut(s) 613
PleI GAGTC 2 cut(s) 316, 424
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 2 cut(s) 316, 424
PscI ACATGT 2 cut(s) 641, 765
Psp6I CCWGG 5 cut(s) 14, 269, 533, 697, 858
PspFI CCCAGC 2 cut(s) 97, 629
PspGI CCWGG 5 cut(s) 14, 269, 533, 697, 858
PspN4I GGNNCC 4 cut(s) 6, 726, 865, 976
PspPI GGNCC 1 cut(s) 33
RsaI GTAC 2 cut(s) 530, 764
RsaNI GTAC 2 cut(s) 529, 763
RseI CAYNNNNRTG 3 cut(s) 519, 563, 896
Rsr2I CGGWCCG 1 cut(s) 33
RsrII CGGWCCG 1 cut(s) 33
SalI GTCGAC 1 cut(s) 964
SatI GCNGC 1 cut(s) 612
Sau3AI GATC 3 cut(s) 456, 545, 691
Sau96I GGNCC 1 cut(s) 33
SchI GAGTC 2 cut(s) 316, 425
ScrFI CCNGG 8 cut(s) 16, 31, 109, 271, 469, 535, 699, 860
SduI GDGCHC 6 cut(s) 204, 284, 397, 754, 881, 910
SetI ASST 9 cut(s) 99, 133, 262, 281, 377, 703, 799, 861, 878
SexAI ACCWGGT 1 cut(s) 697
SfaNI GCATC 1 cut(s) 376
SfoI GGCGCC 1 cut(s) 6
SgrAI CRCCGGYG 1 cut(s) 518
SinI GGWCC 1 cut(s) 33
SmiMI CAYNNNNRTG 3 cut(s) 519, 563, 896
SmlI CTYRAG 1 cut(s) 92
SmoI CTYRAG 1 cut(s) 92
SphI GCATGC 1 cut(s) 895
Sse9I AATT 4 cut(s) 64, 346, 510, 789
SsiI CCGC 7 cut(s) 36, 190, 451, 476, 612, 624, 728
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 3 cut(s) 591, 662, 771
StyD4I CCNGG 8 cut(s) 14, 29, 107, 269, 467, 533, 697, 858
StyI CCWWGG 2 cut(s) 502, 590
TaaI ACNGT 2 cut(s) 463, 868
TaiI ACGT 4 cut(s) 262, 281, 377, 799
TaqI TCGA 4 cut(s) 325, 384, 544, 965
TasI AATT 4 cut(s) 64, 346, 510, 789
TauI GCSGC 1 cut(s) 614
TfiI GAWTC 2 cut(s) 88, 339
TseFI GTSAC 2 cut(s) 193, 262
Tsp45I GTSAC 2 cut(s) 193, 262
TspDTI ATGAA 2 cut(s) 370, 480
TspGWI ACGGA 2 cut(s) 210, 395
VneI GTGCAC 1 cut(s) 877
VpaK11BI GGWCC 1 cut(s) 33
XceI RCATGY 3 cut(s) 645, 769, 895
XmaJI CCTAGG 1 cut(s) 590
XmiI GTMKAC 1 cut(s) 965
XspI CTAG 3 cut(s) 591, 662, 771
ZraI GACGTC 1 cut(s) 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.