Rroxscaffold_93G00440960

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000093
OG0000037
Physical Location & Seq
Forward (+)
105338 .. 108851
3514 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_93G00440960.1

Sequence Viewer

Length: 1143 bp
ATGCTCACACTCGAACCCTTCTCGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAACGGGGAGCCCGCAGCCGTTACCAGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATCGGGGCTGCATTCCCAAACAACCCGACTCGCCGACGCCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCTCGAGGACGCTTCTCCGTACTACAATTCGGACGCCTTACGACGCCAGCATTCTCAAGCCGGGCTATTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGGCAGATATTTGAATGATGCGTCGCCAGCACAAAGGCTGTGCGATCCGTCGAGTTATCATGAATCATCAATACAACGGGCAGAGCCCGCACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCCTTTGACAACGCTGGCACCGCGTAGGGAGACCCCGCAACGAGCACAGCAGTCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAGGCATGCCAATGCAAGGGGCACAGGCACTACTACGATGTCCTTCCCCTAACCGAATGGCTCAGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

380

Amino Acids

41.67

Weight (kDa)

10.45

Isoelectric Point (pI)

57.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
AatII GACGTC 2 cut(s) 246, 949
AccB1I GGYRCC 3 cut(s) 593, 874, 1124
AccI GTMKAC 3 cut(s) 123, 237, 1115
AccII CGCG 3 cut(s) 234, 442, 880
AclWI GGATC 4 cut(s) 55, 68, 767, 849
AcoI YGGCCR 1 cut(s) 275
AcsI RAATTY 1 cut(s) 490
AcyI GRCGYC 6 cut(s) 243, 539, 594, 661, 671, 946
AfaI GTAC 3 cut(s) 446, 648, 914
AfiI CCNNNNNNNGG 9 cut(s) 57, 273, 506, 548, 604, 605, 606, 1023, 1052
AflIII ACRYGT 2 cut(s) 118, 915
AgsI TTSAA 5 cut(s) 144, 395, 418, 742, 938
AjnI CCWGG 3 cut(s) 603, 847, 1008
AluBI AGCT 1 cut(s) 75
AluI AGCT 1 cut(s) 75
Alw21I GWGCWC 4 cut(s) 50, 185, 904, 1031
Alw26I GTCTC 5 cut(s) 200, 250, 467, 881, 986
Alw44I GTGCAC 2 cut(s) 46, 1027
AlwI GGATC 4 cut(s) 55, 68, 767, 849
Ama87I CYCGRG 2 cut(s) 307, 630
AoxI GGCC 2 cut(s) 150, 275
ApaLI GTGCAC 2 cut(s) 46, 1027
ApeKI GCWGC 3 cut(s) 168, 218, 510
ApoI RAATTY 1 cut(s) 490
AspLEI GCGC 4 cut(s) 85, 214, 358, 596
AspS9I GGNCC 6 cut(s) 133, 150, 298, 322, 561, 621
AsuC2I CCSGG 5 cut(s) 268, 565, 619, 689, 699
AsuHPI GGTGA 2 cut(s) 92, 574
AvaI CYCGRG 2 cut(s) 307, 630
AvaII GGWCC 5 cut(s) 133, 298, 322, 561, 621
BaeGI GKGCMC 4 cut(s) 50, 570, 1031, 1060
BamHI GGATCC 1 cut(s) 60
BanI GGYRCC 3 cut(s) 593, 874, 1124
BanII GRGCYC 3 cut(s) 166, 580, 816
BauI CACGAG 1 cut(s) 546
Bbv12I GWGCWC 4 cut(s) 50, 185, 904, 1031
BbvI GCAGC 3 cut(s) 180, 205, 497
BccI CCATC 1 cut(s) 378
BceAI ACGGC 3 cut(s) 156, 225, 695
BcgI CGANNNNNNTGC 4 cut(s) 103, 137, 891, 925
BciT130I CCWGG 3 cut(s) 605, 849, 1010
BciVI GTATCC 1 cut(s) 997
BcnI CCSGG 5 cut(s) 268, 565, 619, 689, 699
BcoDI GTCTC 5 cut(s) 200, 250, 467, 881, 986
BfaI CTAG 1 cut(s) 921
BfoI RGCGCY 1 cut(s) 597
BfuI GTATCC 1 cut(s) 997
BglI GCCNNNNNGGC 1 cut(s) 209
BisI GCNGC 8 cut(s) 169, 219, 278, 281, 284, 364, 511, 542
BlsI GCNGC 8 cut(s) 170, 220, 279, 282, 285, 365, 512, 543
Bme1390I CCNGG 8 cut(s) 268, 565, 605, 619, 689, 699, 849, 1010
Bme18I GGWCC 5 cut(s) 133, 298, 322, 561, 621
BmeT110I CYCGRG 2 cut(s) 307, 630
BmgT120I GGNCC 6 cut(s) 133, 150, 298, 322, 561, 621
BmiI GGNNCC 7 cut(s) 62, 163, 562, 595, 876, 1015, 1126
BmrFI CCNGG 8 cut(s) 268, 565, 605, 619, 689, 699, 849, 1010
BmsI GCATC 3 cut(s) 180, 367, 736
Bpu10I CCTNAGC 1 cut(s) 1098
BpuEI CTTGAG 1 cut(s) 667
BpuMI CCSGG 5 cut(s) 268, 565, 619, 689, 699
BsaHI GRCGYC 6 cut(s) 243, 539, 594, 661, 671, 946
BsaI GGTCTC 2 cut(s) 467, 881
BsaJI CCNNGG 7 cut(s) 129, 249, 351, 481, 604, 727, 1009
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 9 cut(s) 57, 273, 506, 548, 604, 605, 606, 1023, 1052
Bse118I RCCGGY 1 cut(s) 324
Bse1I ACTGG 1 cut(s) 839
BseBI CCWGG 3 cut(s) 605, 849, 1010
BseDI CCNNGG 7 cut(s) 129, 249, 351, 481, 604, 727, 1009
BseGI GGATG 2 cut(s) 343, 370
BseLI CCNNNNNNNGG 9 cut(s) 57, 273, 506, 548, 604, 605, 606, 1023, 1052
BseMII CTCAG 1 cut(s) 1112
BseNI ACTGG 1 cut(s) 839
BseSI GKGCMC 4 cut(s) 50, 570, 1031, 1060
BseXI GCAGC 3 cut(s) 180, 205, 497
Bsh1236I CGCG 3 cut(s) 234, 442, 880
Bsh1285I CGRYCG 3 cut(s) 40, 351, 505
BshFI GGCC 2 cut(s) 152, 277
BshNI GGYRCC 3 cut(s) 593, 874, 1124
BsiEI CGRYCG 3 cut(s) 40, 351, 505
BsiHKAI GWGCWC 4 cut(s) 50, 185, 904, 1031
BsiHKCI CYCGRG 2 cut(s) 307, 630
BsiSI CCGG 6 cut(s) 268, 325, 564, 619, 688, 699
BslFI GGGAC 1 cut(s) 622
BslI CCNNNNNNNGG 9 cut(s) 57, 273, 506, 548, 604, 605, 606, 1023, 1052
BsmAI GTCTC 5 cut(s) 200, 250, 467, 881, 986
BsmBI CGTCTC 2 cut(s) 200, 250
BsmFI GGGAC 1 cut(s) 622
BsmI GAATGC 3 cut(s) 513, 677, 855
BsnI GGCC 2 cut(s) 152, 277
Bso31I GGTCTC 2 cut(s) 467, 881
BsoBI CYCGRG 2 cut(s) 307, 630
Bsp1286I GDGCHC 9 cut(s) 50, 166, 185, 570, 580, 816, 904, 1031, 1060
Bsp143I GATC 6 cut(s) 27, 60, 229, 502, 772, 841
BspANI GGCC 2 cut(s) 152, 277
BspCNI CTCAG 1 cut(s) 1111
BspFNI CGCG 3 cut(s) 234, 442, 880
BspHI TCATGA 1 cut(s) 787
BspLI GGNNCC 7 cut(s) 62, 163, 562, 595, 876, 1015, 1126
BspPI GGATC 4 cut(s) 55, 68, 767, 849
BspT107I GGYRCC 3 cut(s) 593, 874, 1124
BspTNI GGTCTC 2 cut(s) 467, 881
BsrFI RCCGGY 1 cut(s) 324
BsrI ACTGG 1 cut(s) 839
BssAI RCCGGY 1 cut(s) 324
BssECI CCNNGG 7 cut(s) 129, 249, 351, 481, 604, 727, 1009
BssMI GATC 6 cut(s) 27, 60, 229, 502, 772, 841
BssNI GRCGYC 6 cut(s) 243, 539, 594, 661, 671, 946
BssSI CACGAG 1 cut(s) 546
BssT1I CCWWGG 3 cut(s) 129, 481, 727
Bst2BI CACGAG 1 cut(s) 546
Bst2UI CCWGG 3 cut(s) 605, 849, 1010
Bst4CI ACNGT 3 cut(s) 298, 337, 1018
BstACI GRCGYC 6 cut(s) 243, 539, 594, 661, 671, 946
BstDEI CTNAG 2 cut(s) 717, 1098
BstDSI CCRYGG 1 cut(s) 249
BstF5I GGATG 2 cut(s) 343, 370
BstFNI CGCG 3 cut(s) 234, 442, 880
BstH2I RGCGCY 1 cut(s) 597
BstHHI GCGC 4 cut(s) 85, 214, 358, 596
BstKTI GATC 6 cut(s) 30, 63, 232, 505, 775, 844
BstMAI GTCTC 5 cut(s) 200, 250, 467, 881, 986
BstMBI GATC 6 cut(s) 27, 60, 229, 502, 772, 841
BstMCI CGRYCG 3 cut(s) 40, 351, 505
BstMWI GCNNNNNNNGC 8 cut(s) 209, 218, 277, 283, 541, 755, 815, 877
BstNI CCWGG 3 cut(s) 605, 849, 1010
BstNSI RCATGY 4 cut(s) 122, 218, 919, 1045
BstSCI CCNGG 8 cut(s) 266, 563, 603, 617, 687, 697, 847, 1008
BstSLI GKGCMC 4 cut(s) 50, 570, 1031, 1060
BstUI CGCG 3 cut(s) 234, 442, 880
BstV1I GCAGC 3 cut(s) 180, 205, 497
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
BsuI GTATCC 1 cut(s) 997
BsuRI GGCC 2 cut(s) 152, 277
BtgI CCRYGG 1 cut(s) 249
BtgZI GCGATG 1 cut(s) 344
BtsCI GGATG 2 cut(s) 343, 370
CciI TCATGA 1 cut(s) 787
CfoI GCGC 4 cut(s) 85, 214, 358, 596
Cfr10I RCCGGY 1 cut(s) 324
Cfr13I GGNCC 6 cut(s) 133, 150, 298, 322, 561, 621
CpoI CGGWCCG 2 cut(s) 322, 621
CseI GACGC 6 cut(s) 223, 547, 645, 669, 679, 738
CsiI ACCWGGT 1 cut(s) 847
Csp6I GTAC 3 cut(s) 445, 647, 913
CspI CGGWCCG 2 cut(s) 322, 621
CviAII CATG 6 cut(s) 119, 215, 227, 788, 916, 1042
CviQI GTAC 3 cut(s) 445, 647, 913
DdeI CTNAG 2 cut(s) 717, 1098
DinI GGCGCC 1 cut(s) 595
DpnI GATC 6 cut(s) 29, 62, 231, 504, 774, 843
DpnII GATC 6 cut(s) 27, 60, 229, 502, 772, 841
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 1 cut(s) 275
EciI GGCGGA 2 cut(s) 335, 613
Eco130I CCWWGG 3 cut(s) 129, 481, 727
Eco24I GRGCYC 3 cut(s) 166, 580, 816
Eco31I GGTCTC 2 cut(s) 467, 881
Eco47I GGWCC 5 cut(s) 133, 298, 322, 561, 621
Eco88I CYCGRG 2 cut(s) 307, 630
EcoRII CCWGG 3 cut(s) 603, 847, 1008
EcoT14I CCWWGG 3 cut(s) 129, 481, 727
EcoT38I GRGCYC 3 cut(s) 166, 580, 816
EgeI GGCGCC 1 cut(s) 595
EheI GGCGCC 1 cut(s) 595
ErhI CCWWGG 3 cut(s) 129, 481, 727
Esp3I CGTCTC 2 cut(s) 200, 250
FaeI CATG 6 cut(s) 122, 218, 230, 791, 919, 1045
FaqI GGGAC 1 cut(s) 622
FatI CATG 6 cut(s) 118, 214, 226, 787, 915, 1041
FauI CCCGC 5 cut(s) 59, 72, 173, 823, 900
FauNDI CATATG 1 cut(s) 826
FblI GTMKAC 3 cut(s) 123, 237, 1115
Fnu4HI GCNGC 8 cut(s) 169, 219, 278, 281, 284, 364, 511, 542
FokI GGATG 2 cut(s) 330, 357
FriOI GRGCYC 3 cut(s) 166, 580, 816
Fsp4HI GCNGC 8 cut(s) 169, 219, 278, 281, 284, 364, 511, 542
FspBI CTAG 1 cut(s) 921
GlaI GCGC 4 cut(s) 84, 213, 357, 595
GluI GCNGC 8 cut(s) 169, 219, 278, 281, 284, 364, 511, 542
HaeII RGCGCY 1 cut(s) 597
HaeIII GGCC 2 cut(s) 152, 277
HapII CCGG 6 cut(s) 268, 325, 564, 619, 688, 699
HgaI GACGC 6 cut(s) 223, 547, 645, 669, 679, 738
HhaI GCGC 4 cut(s) 85, 214, 358, 596
Hin1I GRCGYC 6 cut(s) 243, 539, 594, 661, 671, 946
Hin1II CATG 6 cut(s) 122, 218, 230, 791, 919, 1045
Hin6I GCGC 4 cut(s) 83, 212, 356, 594
HinP1I GCGC 4 cut(s) 83, 212, 356, 594
HincII GTYRAC 4 cut(s) 108, 124, 238, 1116
HindII GTYRAC 4 cut(s) 108, 124, 238, 1116
HinfI GANTC 7 cut(s) 109, 125, 310, 407, 530, 723, 791
HpaII CCGG 6 cut(s) 268, 325, 564, 619, 688, 699
HphI GGTGA 2 cut(s) 92, 574
Hpy166II GTNNAC 7 cut(s) 48, 108, 124, 238, 301, 1029, 1116
Hpy188I TCNGA 3 cut(s) 348, 659, 991
Hpy188III TCNNGA 5 cut(s) 22, 144, 384, 630, 788
Hpy8I GTNNAC 7 cut(s) 48, 108, 124, 238, 301, 1029, 1116
Hpy99I CGWCG 8 cut(s) 239, 242, 245, 541, 673, 754, 781, 1022
HpyAV CCTTC 4 cut(s) 28, 610, 1089, 1098
HpyCH4III ACNGT 3 cut(s) 298, 337, 1018
HpyCH4IV ACGT 2 cut(s) 243, 946
HpyCH4V TGCA 5 cut(s) 48, 513, 957, 1029, 1051
HpyF10VI GCNNNNNNNGC 8 cut(s) 209, 218, 277, 283, 541, 755, 815, 877
HpyF3I CTNAG 2 cut(s) 717, 1098
HpySE526I ACGT 2 cut(s) 243, 946
Hsp92I GRCGYC 6 cut(s) 243, 539, 594, 661, 671, 946
Hsp92II CATG 6 cut(s) 122, 218, 230, 791, 919, 1045
HspAI GCGC 4 cut(s) 83, 212, 356, 594
KasI GGCGCC 1 cut(s) 593
Kzo9I GATC 6 cut(s) 27, 60, 229, 502, 772, 841
LmnI GCTCC 1 cut(s) 161
Lsp1109I GCAGC 3 cut(s) 180, 205, 497
LweI GCATC 3 cut(s) 180, 367, 736
MabI ACCWGGT 1 cut(s) 847
MaeI CTAG 1 cut(s) 921
MaeII ACGT 2 cut(s) 243, 946
MaeIII GTNAC 4 cut(s) 173, 292, 331, 712
MalI GATC 6 cut(s) 29, 62, 231, 504, 774, 843
MboI GATC 6 cut(s) 27, 60, 229, 502, 772, 841
MboII GAAGA 1 cut(s) 37
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 9 cut(s) 50, 166, 185, 570, 580, 816, 904, 1031, 1060
MluCI AATT 4 cut(s) 389, 490, 653, 939
Mly113I GGCGCC 1 cut(s) 594
MlyI GAGTC 5 cut(s) 103, 119, 319, 401, 524
MmeI TCCRAC 1 cut(s) 371
MnlI CCTC 8 cut(s) 346, 391, 448, 555, 596, 626, 637, 1115
MseI TTAA 1 cut(s) 96
MslI CAYNNNNRTG 2 cut(s) 188, 1046
MspI CCGG 6 cut(s) 268, 325, 564, 619, 688, 699
MspR9I CCNGG 8 cut(s) 268, 565, 605, 619, 689, 699, 849, 1010
Mva1269I GAATGC 3 cut(s) 513, 677, 855
MvaI CCWGG 3 cut(s) 605, 849, 1010
MvnI CGCG 3 cut(s) 234, 442, 880
MwoI GCNNNNNNNGC 8 cut(s) 209, 218, 277, 283, 541, 755, 815, 877
NarI GGCGCC 1 cut(s) 594
NciI CCSGG 5 cut(s) 268, 565, 619, 689, 699
NdeI CATATG 1 cut(s) 826
NdeII GATC 6 cut(s) 27, 60, 229, 502, 772, 841
NlaIII CATG 6 cut(s) 122, 218, 230, 791, 919, 1045
NlaIV GGNNCC 7 cut(s) 62, 163, 562, 595, 876, 1015, 1126
NmeAIII GCCGAG 1 cut(s) 229
NmuCI GTSAC 1 cut(s) 331
NspI RCATGY 4 cut(s) 122, 218, 919, 1045
PaeI GCATGC 2 cut(s) 218, 1045
PaeR7I CTCGAG 1 cut(s) 630
PagI TCATGA 1 cut(s) 787
PciI ACATGT 2 cut(s) 118, 915
PcsI WCGNNNNNNNCGW 1 cut(s) 191
PctI GAATGC 3 cut(s) 513, 677, 855
PfeI GAWTC 2 cut(s) 723, 791
PflFI GACNNNGTC 2 cut(s) 242, 559
PkrI GCNGC 8 cut(s) 170, 220, 279, 282, 285, 365, 512, 543
Ple19I CGATCG 1 cut(s) 505
PleI GAGTC 5 cut(s) 103, 119, 318, 401, 524
PluTI GGCGCC 1 cut(s) 597
PpsI GAGTC 5 cut(s) 103, 119, 318, 401, 524
PscI ACATGT 2 cut(s) 118, 915
Psp6I CCWGG 3 cut(s) 603, 847, 1008
PspGI CCWGG 3 cut(s) 603, 847, 1008
PspN4I GGNNCC 7 cut(s) 62, 163, 562, 595, 876, 1015, 1126
PspPI GGNCC 6 cut(s) 133, 150, 298, 322, 561, 621
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 2 cut(s) 242, 559
PvuI CGATCG 1 cut(s) 505
RsaI GTAC 3 cut(s) 446, 648, 914
RsaNI GTAC 3 cut(s) 445, 647, 913
RseI CAYNNNNRTG 2 cut(s) 188, 1046
Rsr2I CGGWCCG 2 cut(s) 322, 621
RsrII CGGWCCG 2 cut(s) 322, 621
SalI GTCGAC 3 cut(s) 122, 236, 1114
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 8 cut(s) 169, 219, 278, 281, 284, 364, 511, 542
Sau3AI GATC 6 cut(s) 27, 60, 229, 502, 772, 841
Sau96I GGNCC 6 cut(s) 133, 150, 298, 322, 561, 621
SchI GAGTC 5 cut(s) 103, 119, 319, 401, 524
ScrFI CCNGG 8 cut(s) 268, 565, 605, 619, 689, 699, 849, 1010
SduI GDGCHC 9 cut(s) 50, 166, 185, 570, 580, 816, 904, 1031, 1060
SetI ASST 7 cut(s) 36, 77, 246, 853, 949, 1011, 1028
SexAI ACCWGGT 1 cut(s) 847
SfaNI GCATC 3 cut(s) 180, 367, 736
SfoI GGCGCC 1 cut(s) 595
Sfr274I CTCGAG 1 cut(s) 630
SgrDI CGTCGACG 1 cut(s) 236
SinI GGWCC 5 cut(s) 133, 298, 322, 561, 621
SlaI CTCGAG 1 cut(s) 630
SmiMI CAYNNNNRTG 2 cut(s) 188, 1046
SmlI CTYRAG 2 cut(s) 630, 682
SmoI CTYRAG 2 cut(s) 630, 682
SphI GCATGC 2 cut(s) 218, 1045
Sse9I AATT 4 cut(s) 389, 490, 653, 939
SspDI GGCGCC 1 cut(s) 593
SspMI CTAG 1 cut(s) 921
StyD4I CCNGG 8 cut(s) 266, 563, 603, 617, 687, 697, 847, 1008
StyI CCWWGG 3 cut(s) 129, 481, 727
TaaI ACNGT 3 cut(s) 298, 337, 1018
TaiI ACGT 2 cut(s) 246, 949
TaqI TCGA 8 cut(s) 12, 23, 123, 237, 313, 631, 779, 1115
TaqII GACCGA 3 cut(s) 26, 365, 449
TasI AATT 4 cut(s) 389, 490, 653, 939
TauI GCSGC 5 cut(s) 280, 283, 286, 366, 544
TfiI GAWTC 2 cut(s) 723, 791
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TseFI GTSAC 1 cut(s) 331
TseI GCWGC 3 cut(s) 168, 218, 510
Tsp45I GTSAC 1 cut(s) 331
TspDTI ATGAA 2 cut(s) 418, 804
TspGWI ACGGA 5 cut(s) 125, 280, 502, 634, 765
Tth111I GACNNNGTC 2 cut(s) 242, 559
VneI GTGCAC 2 cut(s) 46, 1027
VpaK11BI GGWCC 5 cut(s) 133, 298, 322, 561, 621
XapI RAATTY 1 cut(s) 490
XceI RCATGY 4 cut(s) 122, 218, 919, 1045
XhoI CTCGAG 1 cut(s) 630
XmiI GTMKAC 3 cut(s) 123, 237, 1115
XspI CTAG 1 cut(s) 921
ZraI GACGTC 2 cut(s) 244, 947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.