Rroxscaffold_78G00449590

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000078
OG0000037
Physical Location & Seq
Forward (+)
2388 .. 3706
1319 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_78G00449590.1

Sequence Viewer

Length: 825 bp
ATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCGCCCGCTGGACCCTACCTCCGCCGAGCCGTTTCCGTGGTGGGCAGGTGTTAAACGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCGGAATTTTAACCCGATTCCCTTTCGGGTTCGCGCGAGACGCGCTATCGACGGGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGTTCACGGCTCCGCCTATCCCGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCGACGAACGATTTGCACGTCGCATCGCTGCGGGCCTCCACCGAGTTCCTCGGCTTCGCCCCCGCTCGGCATAGTTCACCATCTTTCGGGTCCCGACAGCATGCTCACACTCGAACCCTTCTCGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCGACTCCTTGGTCCGTGTTTCAAGACGGCCGAATGGGGAGCCCGCAGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

274

Amino Acids

29.61

Weight (kDa)

11.16

Isoelectric Point (pI)

58.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 127
AasI GACNNNNNNGTC 1 cut(s) 662
AatII GACGTC 2 cut(s) 183, 776
Acc36I ACCTGC 1 cut(s) 127
AccBSI CCGCTC 1 cut(s) 496
AccI GTMKAC 3 cut(s) 433, 654, 767
AccII CGCG 5 cut(s) 75, 257, 259, 266, 764
AccIII TCCGGA 1 cut(s) 35
AclI AACGTT 1 cut(s) 197
AclWI GGATC 2 cut(s) 586, 599
AcoI YGGCCR 2 cut(s) 680, 805
AcsI RAATTY 1 cut(s) 228
AcyI GRCGYC 2 cut(s) 180, 773
AfaI GTAC 1 cut(s) 7
AfiI CCNNNNNNNGG 7 cut(s) 99, 219, 497, 517, 588, 708, 803
AflIII ACRYGT 1 cut(s) 649
AgsI TTSAA 2 cut(s) 45, 675
AjiI CACGTC 3 cut(s) 79, 216, 450
AjnI CCWGG 1 cut(s) 707
AluBI AGCT 2 cut(s) 391, 606
AluI AGCT 2 cut(s) 391, 606
Alw21I GWGCWC 3 cut(s) 89, 581, 716
Alw26I GTCTC 4 cut(s) 187, 255, 731, 780
Alw44I GTGCAC 1 cut(s) 577
AlwI GGATC 2 cut(s) 586, 599
Ama87I CYCGRG 2 cut(s) 164, 365
Aor13HI TCCGGA 1 cut(s) 35
AoxI GGCC 5 cut(s) 48, 168, 464, 680, 805
ApaLI GTGCAC 1 cut(s) 577
ApeKI GCWGC 2 cut(s) 459, 698
ApoI RAATTY 1 cut(s) 228
ArsI GACNNNNNNTTYG 2 cut(s) 426, 458
Asp700I GAANNNNTTC 1 cut(s) 345
AspLEI GCGC 7 cut(s) 61, 259, 268, 305, 616, 745, 751
AspS9I GGNCC 7 cut(s) 30, 48, 102, 169, 464, 521, 664
AsuC2I CCSGG 3 cut(s) 55, 220, 798
AsuHPI GGTGA 2 cut(s) 500, 623
AvaI CYCGRG 2 cut(s) 164, 365
AvaII GGWCC 4 cut(s) 30, 102, 521, 664
BaeGI GKGCMC 1 cut(s) 581
BamHI GGATCC 1 cut(s) 591
BanII GRGCYC 1 cut(s) 696
Bbv12I GWGCWC 3 cut(s) 89, 581, 716
BbvI GCAGC 2 cut(s) 446, 710
BccI CCATC 1 cut(s) 519
BceAI ACGGC 6 cut(s) 105, 187, 367, 686, 695, 756
BcgI CGANNNNNNTGC 6 cut(s) 282, 316, 426, 460, 634, 668
BciT130I CCWGG 1 cut(s) 709
BcnI CCSGG 3 cut(s) 55, 220, 798
BcoDI GTCTC 4 cut(s) 187, 255, 731, 780
BfaI CTAG 1 cut(s) 395
BfuAI ACCTGC 1 cut(s) 127
BglI GCCNNNNNGGC 2 cut(s) 56, 740
BisI GCNGC 6 cut(s) 51, 460, 699, 808, 811, 814
BlsI GCNGC 6 cut(s) 52, 461, 700, 809, 812, 815
Bme1390I CCNGG 4 cut(s) 55, 220, 709, 798
Bme18I GGWCC 4 cut(s) 30, 102, 521, 664
BmeT110I CYCGRG 2 cut(s) 164, 365
BmgBI CACGTC 3 cut(s) 79, 216, 450
BmgT120I GGNCC 7 cut(s) 30, 48, 102, 169, 464, 521, 664
BmiI GGNNCC 8 cut(s) 104, 171, 355, 386, 522, 523, 593, 693
BmrFI CCNGG 4 cut(s) 55, 220, 709, 798
BmsI GCATC 3 cut(s) 301, 463, 711
BpuMI CCSGG 3 cut(s) 55, 220, 798
BsaHI GRCGYC 2 cut(s) 180, 773
BsaJI CCNNGG 7 cut(s) 54, 127, 165, 366, 480, 660, 779
BsaWI WCCGGW 2 cut(s) 35, 63
BsaXI ACNNNNNCTCC 4 cut(s) 94, 124, 760, 790
Bsc4I CCNNNNNNNGG 7 cut(s) 99, 219, 497, 517, 588, 708, 803
Bse118I RCCGGY 1 cut(s) 11
BseAI TCCGGA 1 cut(s) 35
BseBI CCWGG 1 cut(s) 709
BseDI CCNNGG 7 cut(s) 54, 127, 165, 366, 480, 660, 779
BseLI CCNNNNNNNGG 7 cut(s) 99, 219, 497, 517, 588, 708, 803
BseSI GKGCMC 1 cut(s) 581
BseX3I CGGCCG 1 cut(s) 680
BseXI GCAGC 2 cut(s) 446, 710
Bsh1236I CGCG 5 cut(s) 75, 257, 259, 266, 764
Bsh1285I CGRYCG 3 cut(s) 12, 571, 683
BshFI GGCC 5 cut(s) 50, 170, 466, 682, 807
BsiEI CGRYCG 3 cut(s) 12, 571, 683
BsiHKAI GWGCWC 3 cut(s) 89, 581, 716
BsiHKCI CYCGRG 2 cut(s) 164, 365
BsiSI CCGG 6 cut(s) 12, 36, 54, 64, 220, 798
BslFI GGGAC 2 cut(s) 202, 507
BslI CCNNNNNNNGG 7 cut(s) 99, 219, 497, 517, 588, 708, 803
BsmAI GTCTC 4 cut(s) 187, 255, 731, 780
BsmBI CGTCTC 4 cut(s) 187, 255, 731, 780
BsmFI GGGAC 2 cut(s) 202, 507
BsnI GGCC 5 cut(s) 50, 170, 466, 682, 807
BsoBI CYCGRG 2 cut(s) 164, 365
Bsp1286I GDGCHC 4 cut(s) 89, 581, 696, 716
Bsp13I TCCGGA 1 cut(s) 35
Bsp143I GATC 3 cut(s) 558, 591, 759
BspANI GGCC 5 cut(s) 50, 170, 466, 682, 807
BspEI TCCGGA 1 cut(s) 35
BspFNI CGCG 5 cut(s) 75, 257, 259, 266, 764
BspLI GGNNCC 8 cut(s) 104, 171, 355, 386, 522, 523, 593, 693
BspMI ACCTGC 1 cut(s) 127
BspPI GGATC 2 cut(s) 586, 599
BspQI GCTCTTC 1 cut(s) 94
BsrBI CCGCTC 1 cut(s) 496
BsrFI RCCGGY 1 cut(s) 11
BssAI RCCGGY 1 cut(s) 11
BssECI CCNNGG 7 cut(s) 54, 127, 165, 366, 480, 660, 779
BssMI GATC 3 cut(s) 558, 591, 759
BssNI GRCGYC 2 cut(s) 180, 773
BssT1I CCWWGG 1 cut(s) 660
Bst2UI CCWGG 1 cut(s) 709
Bst4CI ACNGT 1 cut(s) 401
Bst6I CTCTTC 2 cut(s) 94, 165
BstACI GRCGYC 2 cut(s) 180, 773
BstC8I GCNNGC 7 cut(s) 97, 464, 533, 696, 716, 732, 747
BstDSI CCRYGG 2 cut(s) 127, 779
BstFNI CGCG 5 cut(s) 75, 257, 259, 266, 764
BstHHI GCGC 7 cut(s) 61, 259, 268, 305, 616, 745, 751
BstKTI GATC 3 cut(s) 561, 594, 762
BstMAI GTCTC 4 cut(s) 187, 255, 731, 780
BstMBI GATC 3 cut(s) 558, 591, 759
BstMCI CGRYCG 3 cut(s) 12, 571, 683
BstMWI GCNNNNNNNGC 8 cut(s) 21, 56, 263, 265, 311, 740, 807, 813
BstNI CCWGG 1 cut(s) 709
BstNSI RCATGY 3 cut(s) 535, 653, 749
BstSCI CCNGG 4 cut(s) 53, 218, 707, 796
BstSLI GKGCMC 1 cut(s) 581
BstUI CGCG 5 cut(s) 75, 257, 259, 266, 764
BstV1I GCAGC 2 cut(s) 446, 710
BstX2I RGATCY 1 cut(s) 591
BstYI RGATCY 1 cut(s) 591
BstZI CGGCCG 1 cut(s) 680
BsuRI GGCC 5 cut(s) 50, 170, 466, 682, 807
BtgI CCRYGG 2 cut(s) 127, 779
BtgZI GCGATG 1 cut(s) 440
BtrI CACGTC 3 cut(s) 79, 216, 450
BveI ACCTGC 1 cut(s) 127
Cac8I GCNNGC 7 cut(s) 97, 464, 533, 696, 716, 732, 747
CfoI GCGC 7 cut(s) 61, 259, 268, 305, 616, 745, 751
Cfr10I RCCGGY 1 cut(s) 11
Cfr13I GGNCC 7 cut(s) 30, 48, 102, 169, 464, 521, 664
CseI GACGC 2 cut(s) 272, 753
Csp6I GTAC 1 cut(s) 6
CviAII CATG 4 cut(s) 532, 650, 746, 757
CviQI GTAC 1 cut(s) 6
DpnI GATC 3 cut(s) 560, 593, 761
DpnII GATC 3 cut(s) 558, 591, 759
DrdI GACNNNNNNGTC 1 cut(s) 662
DseDI GACNNNNNNGTC 1 cut(s) 662
EaeI YGGCCR 2 cut(s) 680, 805
EagI CGGCCG 1 cut(s) 680
Eam1104I CTCTTC 2 cut(s) 94, 165
EarI CTCTTC 2 cut(s) 94, 165
EciI GGCGGA 3 cut(s) 82, 102, 346
EclXI CGGCCG 1 cut(s) 680
Eco130I CCWWGG 1 cut(s) 660
Eco24I GRGCYC 1 cut(s) 696
Eco47I GGWCC 4 cut(s) 30, 102, 521, 664
Eco52I CGGCCG 1 cut(s) 680
Eco88I CYCGRG 2 cut(s) 164, 365
EcoO109I RGGNCCY 2 cut(s) 169, 521
EcoRII CCWGG 1 cut(s) 707
EcoT14I CCWWGG 1 cut(s) 660
EcoT38I GRGCYC 1 cut(s) 696
ErhI CCWWGG 1 cut(s) 660
Esp3I CGTCTC 4 cut(s) 187, 255, 731, 780
FaeI CATG 4 cut(s) 535, 653, 749, 760
FaiI YATR 7 cut(s) 424, 503, 533, 651, 747, 758, 787
FaqI GGGAC 2 cut(s) 202, 507
FatI CATG 4 cut(s) 531, 649, 745, 756
FauI CCCGC 7 cut(s) 104, 181, 455, 501, 590, 603, 703
FblI GTMKAC 3 cut(s) 433, 654, 767
Fnu4HI GCNGC 6 cut(s) 51, 460, 699, 808, 811, 814
FriOI GRGCYC 1 cut(s) 696
Fsp4HI GCNGC 6 cut(s) 51, 460, 699, 808, 811, 814
FspBI CTAG 1 cut(s) 395
GlaI GCGC 7 cut(s) 60, 258, 267, 304, 615, 744, 750
GluI GCNGC 6 cut(s) 51, 460, 699, 808, 811, 814
HaeIII GGCC 5 cut(s) 50, 170, 466, 682, 807
HapII CCGG 6 cut(s) 12, 36, 54, 64, 220, 798
HgaI GACGC 2 cut(s) 272, 753
HhaI GCGC 7 cut(s) 61, 259, 268, 305, 616, 745, 751
Hin1I GRCGYC 2 cut(s) 180, 773
Hin1II CATG 4 cut(s) 535, 653, 749, 760
Hin6I GCGC 7 cut(s) 59, 257, 266, 303, 614, 743, 749
HinP1I GCGC 7 cut(s) 59, 257, 266, 303, 614, 743, 749
HincII GTYRAC 5 cut(s) 207, 434, 639, 655, 768
HindII GTYRAC 5 cut(s) 207, 434, 639, 655, 768
HinfI GANTC 4 cut(s) 188, 240, 640, 656
HpaII CCGG 6 cut(s) 12, 36, 54, 64, 220, 798
HphI GGTGA 2 cut(s) 500, 623
Hpy166II GTNNAC 8 cut(s) 207, 349, 434, 508, 579, 639, 655, 768
Hpy188I TCNGA 3 cut(s) 187, 227, 380
Hpy188III TCNNGA 6 cut(s) 36, 164, 365, 524, 553, 675
Hpy8I GTNNAC 8 cut(s) 207, 349, 434, 508, 579, 639, 655, 768
Hpy99I CGWCG 8 cut(s) 80, 182, 277, 438, 454, 769, 772, 775
HpyAV CCTTC 1 cut(s) 559
HpyCH4III ACNGT 1 cut(s) 401
HpyCH4IV ACGT 6 cut(s) 78, 180, 197, 215, 449, 773
HpyCH4V TGCA 2 cut(s) 447, 579
HpyF10VI GCNNNNNNNGC 8 cut(s) 21, 56, 263, 265, 311, 740, 807, 813
HpySE526I ACGT 6 cut(s) 78, 180, 197, 215, 449, 773
Hsp92I GRCGYC 2 cut(s) 180, 773
Hsp92II CATG 4 cut(s) 535, 653, 749, 760
HspAI GCGC 7 cut(s) 59, 257, 266, 303, 614, 743, 749
KflI GGGWCCC 1 cut(s) 521
Kpn2I TCCGGA 1 cut(s) 35
Kzo9I GATC 3 cut(s) 558, 591, 759
LguI GCTCTTC 1 cut(s) 94
LmnI GCTCC 3 cut(s) 359, 691, 711
Lsp1109I GCAGC 2 cut(s) 446, 710
LweI GCATC 3 cut(s) 301, 463, 711
MaeI CTAG 1 cut(s) 395
MaeII ACGT 6 cut(s) 78, 180, 197, 215, 449, 773
MaeIII GTNAC 1 cut(s) 703
MalI GATC 3 cut(s) 560, 593, 761
MbiI CCGCTC 1 cut(s) 496
MboI GATC 3 cut(s) 558, 591, 759
MboII GAAGA 3 cut(s) 81, 152, 568
MflI RGATCY 1 cut(s) 591
MhlI GDGCHC 4 cut(s) 89, 581, 696, 716
MluCI AATT 1 cut(s) 228
MlyI GAGTC 3 cut(s) 182, 634, 650
MmeI TCCRAC 1 cut(s) 210
MnlI CCTC 9 cut(s) 43, 120, 160, 287, 325, 361, 374, 477, 490
MroI TCCGGA 1 cut(s) 35
MroXI GAANNNNTTC 1 cut(s) 345
MseI TTAA 3 cut(s) 143, 233, 627
MslI CAYNNNNRTG 1 cut(s) 719
MspA1I CMGCKG 1 cut(s) 99
MspI CCGG 6 cut(s) 12, 36, 54, 64, 220, 798
MspR9I CCNGG 4 cut(s) 55, 220, 709, 798
MvaI CCWGG 1 cut(s) 709
MvnI CGCG 5 cut(s) 75, 257, 259, 266, 764
MwoI GCNNNNNNNGC 8 cut(s) 21, 56, 263, 265, 311, 740, 807, 813
NciI CCSGG 3 cut(s) 55, 220, 798
NdeII GATC 3 cut(s) 558, 591, 759
NlaIII CATG 4 cut(s) 535, 653, 749, 760
NlaIV GGNNCC 8 cut(s) 104, 171, 355, 386, 522, 523, 593, 693
NmeAIII GCCGAG 4 cut(s) 141, 461, 477, 760
NspI RCATGY 3 cut(s) 535, 653, 749
PaeI GCATGC 2 cut(s) 535, 749
PaqCI CACCTGC 1 cut(s) 127
PciI ACATGT 1 cut(s) 649
PciSI GCTCTTC 1 cut(s) 94
PcsI WCGNNNNNNNCGW 2 cut(s) 446, 722
PdmI GAANNNNTTC 1 cut(s) 345
PfeI GAWTC 1 cut(s) 240
PflFI GACNNNGTC 1 cut(s) 772
PkrI GCNGC 6 cut(s) 52, 461, 700, 809, 812, 815
PleI GAGTC 3 cut(s) 182, 634, 650
PpsI GAGTC 3 cut(s) 182, 634, 650
PpuMI RGGWCCY 1 cut(s) 521
PscI ACATGT 1 cut(s) 649
Psp1406I AACGTT 1 cut(s) 197
Psp5II RGGWCCY 1 cut(s) 521
Psp6I CCWGG 1 cut(s) 707
PspGI CCWGG 1 cut(s) 707
PspN4I GGNNCC 8 cut(s) 104, 171, 355, 386, 522, 523, 593, 693
PspPI GGNCC 7 cut(s) 30, 48, 102, 169, 464, 521, 664
PspPPI RGGWCCY 1 cut(s) 521
PsuI RGATCY 1 cut(s) 591
PsyI GACNNNGTC 1 cut(s) 772
RsaI GTAC 1 cut(s) 7
RsaNI GTAC 1 cut(s) 6
RseI CAYNNNNRTG 1 cut(s) 719
SalI GTCGAC 3 cut(s) 432, 653, 766
SapI GCTCTTC 1 cut(s) 94
SaqAI TTAA 3 cut(s) 143, 233, 627
SatI GCNGC 6 cut(s) 51, 460, 699, 808, 811, 814
Sau3AI GATC 3 cut(s) 558, 591, 759
Sau96I GGNCC 7 cut(s) 30, 48, 102, 169, 464, 521, 664
SchI GAGTC 3 cut(s) 182, 634, 650
ScrFI CCNGG 4 cut(s) 55, 220, 709, 798
SduI GDGCHC 4 cut(s) 89, 581, 696, 716
SfaNI GCATC 3 cut(s) 301, 463, 711
SgrDI CGTCGACG 1 cut(s) 766
SinI GGWCC 4 cut(s) 30, 102, 521, 664
SmiMI CAYNNNNRTG 1 cut(s) 719
SphI GCATGC 2 cut(s) 535, 749
Sse9I AATT 1 cut(s) 228
SspMI CTAG 1 cut(s) 395
StyD4I CCNGG 4 cut(s) 53, 218, 707, 796
StyI CCWWGG 1 cut(s) 660
TaaI ACNGT 1 cut(s) 401
TaiI ACGT 6 cut(s) 81, 183, 200, 218, 452, 776
TaqI TCGA 8 cut(s) 272, 292, 404, 433, 543, 554, 654, 767
TaqII GACCGA 2 cut(s) 18, 557
TasI AATT 1 cut(s) 228
TauI GCSGC 4 cut(s) 53, 810, 813, 816
TfiI GAWTC 1 cut(s) 240
Tru1I TTAA 3 cut(s) 143, 233, 627
Tru9I TTAA 3 cut(s) 143, 233, 627
TseI GCWGC 2 cut(s) 459, 698
TspGWI ACGGA 3 cut(s) 116, 656, 810
Tth111I GACNNNGTC 1 cut(s) 772
VneI GTGCAC 1 cut(s) 577
VpaK11BI GGWCC 4 cut(s) 30, 102, 521, 664
XapI RAATTY 1 cut(s) 228
XceI RCATGY 3 cut(s) 535, 653, 749
XmiI GTMKAC 3 cut(s) 433, 654, 767
XmnI GAANNNNTTC 1 cut(s) 345
XspI CTAG 1 cut(s) 395
ZraI GACGTC 2 cut(s) 181, 774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.