Rroxscaffold_49G00438690

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000049
OG0000037
Physical Location & Seq
Reverse (-)
83881 .. 87247
3367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_49G00438690.1

Sequence Viewer

Length: 849 bp
ATGGGGAGCCCGCAGGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCGGGCTTTGGCCGCCGCCGCATCCCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCGAGGACGCTTCTCCGGACTACAATTCGGACGCCTTACGACGCCAGATTCTCAAGCTGGGCTATTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGCAGGTTTCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCAGACGAGCGAACCGCCCACGTCGCCGCGATCCGAAAACTTCACCGGACCATTCAATCGGATCAACCAGGTAGCATTCCTTTGACAACGCTGGCACCGCGTAGGGAGACCCTGCAACGAGCACAGCAGTCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAGGCATGCCAATGCAAGGGGCACAGGCACTACTACGATGTCCTTCCCCTAACCGAATGGCTCGGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

282

Amino Acids

30.23

Weight (kDa)

9.93

Isoelectric Point (pI)

49.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 93, 486, 655
AbsI CCTCGAGG 1 cut(s) 286
Acc36I ACCTGC 2 cut(s) 377, 401
AccB1I GGYRCC 3 cut(s) 251, 580, 830
AccI GTMKAC 2 cut(s) 84, 821
AccII CGCG 4 cut(s) 81, 480, 515, 586
AccIII TCCGGA 1 cut(s) 300
AclWI GGATC 3 cut(s) 395, 511, 555
AcoI YGGCCR 1 cut(s) 122
AcsI RAATTY 1 cut(s) 148
AcyI GRCGYC 6 cut(s) 90, 252, 317, 327, 483, 652
AfaI GTAC 1 cut(s) 620
AflIII ACRYGT 1 cut(s) 621
AgsI TTSAA 2 cut(s) 542, 644
AjiI CACGTC 1 cut(s) 508
AjnI CCWGG 4 cut(s) 23, 261, 553, 714
AluBI AGCT 1 cut(s) 342
AluI AGCT 1 cut(s) 342
Alw21I GWGCWC 3 cut(s) 32, 610, 737
Alw26I GTCTC 4 cut(s) 47, 97, 587, 692
Alw44I GTGCAC 1 cut(s) 733
AlwI GGATC 3 cut(s) 395, 511, 555
Ama87I CYCGRG 2 cut(s) 286, 804
Aor13HI TCCGGA 1 cut(s) 300
AoxI GGCC 2 cut(s) 15, 122
ApaLI GTGCAC 1 cut(s) 733
ApeKI GCWGC 2 cut(s) 65, 168
ApoI RAATTY 1 cut(s) 148
AspLEI GCGC 3 cut(s) 61, 202, 254
AspS9I GGNCC 3 cut(s) 219, 279, 534
AsuC2I CCSGG 4 cut(s) 115, 223, 277, 354
AsuHPI GGTGA 3 cut(s) 232, 408, 521
AvaI CYCGRG 2 cut(s) 286, 804
AvaII GGWCC 3 cut(s) 219, 279, 534
BaeGI GKGCMC 3 cut(s) 228, 737, 766
BanI GGYRCC 3 cut(s) 251, 580, 830
BanII GRGCYC 2 cut(s) 11, 238
BauI CACGAG 1 cut(s) 204
Bbv12I GWGCWC 3 cut(s) 32, 610, 737
BbvI GCAGC 2 cut(s) 52, 155
BceAI ACGGC 3 cut(s) 2, 72, 350
BcgI CGANNNNNNTGC 2 cut(s) 597, 631
BciT130I CCWGG 4 cut(s) 25, 263, 555, 716
BciVI GTATCC 1 cut(s) 703
BcnI CCSGG 4 cut(s) 115, 223, 277, 354
BcoDI GTCTC 4 cut(s) 47, 97, 587, 692
BfaI CTAG 1 cut(s) 627
BfoI RGCGCY 2 cut(s) 203, 255
BfuAI ACCTGC 2 cut(s) 377, 401
BfuI GTATCC 1 cut(s) 703
BglI GCCNNNNNGGC 1 cut(s) 56
BisI GCNGC 6 cut(s) 66, 125, 128, 131, 169, 513
BlsI GCNGC 6 cut(s) 67, 126, 129, 132, 170, 514
Bme1390I CCNGG 8 cut(s) 25, 115, 223, 263, 277, 354, 555, 716
Bme18I GGWCC 3 cut(s) 219, 279, 534
BmeT110I CYCGRG 2 cut(s) 286, 804
BmgBI CACGTC 1 cut(s) 508
BmgT120I GGNCC 3 cut(s) 219, 279, 534
BmiI GGNNCC 6 cut(s) 8, 220, 253, 582, 721, 832
BmrFI CCNGG 8 cut(s) 25, 115, 223, 263, 277, 354, 555, 716
BmsI GCATC 2 cut(s) 27, 142
BpuEI CTTGAG 1 cut(s) 322
BpuMI CCSGG 4 cut(s) 115, 223, 277, 354
BsaHI GRCGYC 6 cut(s) 90, 252, 317, 327, 483, 652
BsaI GGTCTC 1 cut(s) 587
BsaJI CCNNGG 4 cut(s) 96, 139, 262, 715
BsaWI WCCGGW 2 cut(s) 300, 531
BsaXI ACNNNNNCTCC 4 cut(s) 77, 107, 426, 456
BseAI TCCGGA 1 cut(s) 300
BseBI CCWGG 4 cut(s) 25, 263, 555, 716
BseDI CCNNGG 4 cut(s) 96, 139, 262, 715
BseGI GGATG 1 cut(s) 133
BseSI GKGCMC 3 cut(s) 228, 737, 766
BseXI GCAGC 2 cut(s) 52, 155
BseYI CCCAGC 1 cut(s) 342
Bsh1236I CGCG 4 cut(s) 81, 480, 515, 586
BshFI GGCC 2 cut(s) 17, 124
BshNI GGYRCC 3 cut(s) 251, 580, 830
BsiHKAI GWGCWC 3 cut(s) 32, 610, 737
BsiHKCI CYCGRG 2 cut(s) 286, 804
BsiSI CCGG 6 cut(s) 114, 222, 277, 301, 354, 532
BslFI GGGAC 1 cut(s) 280
BsmAI GTCTC 4 cut(s) 47, 97, 587, 692
BsmBI CGTCTC 2 cut(s) 47, 97
BsmFI GGGAC 1 cut(s) 280
BsmI GAATGC 2 cut(s) 171, 561
BsnI GGCC 2 cut(s) 17, 124
Bso31I GGTCTC 1 cut(s) 587
BsoBI CYCGRG 2 cut(s) 286, 804
Bsp1286I GDGCHC 7 cut(s) 11, 32, 228, 238, 610, 737, 766
Bsp13I TCCGGA 1 cut(s) 300
Bsp143I GATC 4 cut(s) 76, 400, 516, 547
Bsp68I TCGCGA 1 cut(s) 480
BspANI GGCC 2 cut(s) 17, 124
BspEI TCCGGA 1 cut(s) 300
BspFNI CGCG 4 cut(s) 81, 480, 515, 586
BspLI GGNNCC 6 cut(s) 8, 220, 253, 582, 721, 832
BspMI ACCTGC 2 cut(s) 377, 401
BspPI GGATC 3 cut(s) 395, 511, 555
BspT107I GGYRCC 3 cut(s) 251, 580, 830
BspTNI GGTCTC 1 cut(s) 587
BssECI CCNNGG 4 cut(s) 96, 139, 262, 715
BssMI GATC 4 cut(s) 76, 400, 516, 547
BssNI GRCGYC 6 cut(s) 90, 252, 317, 327, 483, 652
BssSI CACGAG 1 cut(s) 204
BssT1I CCWWGG 1 cut(s) 139
Bst2BI CACGAG 1 cut(s) 204
Bst2UI CCWGG 4 cut(s) 25, 263, 555, 716
Bst4CI ACNGT 1 cut(s) 724
BstACI GRCGYC 6 cut(s) 90, 252, 317, 327, 483, 652
BstC8I GCNNGC 8 cut(s) 11, 15, 32, 48, 63, 363, 579, 749
BstDEI CTNAG 1 cut(s) 372
BstDSI CCRYGG 1 cut(s) 96
BstENI CCTNNNNNAGG 1 cut(s) 408
BstF5I GGATG 1 cut(s) 133
BstFNI CGCG 4 cut(s) 81, 480, 515, 586
BstH2I RGCGCY 2 cut(s) 203, 255
BstHHI GCGC 3 cut(s) 61, 202, 254
BstKTI GATC 4 cut(s) 79, 403, 519, 550
BstMAI GTCTC 4 cut(s) 47, 97, 587, 692
BstMBI GATC 4 cut(s) 76, 400, 516, 547
BstMWI GCNNNNNNNGC 7 cut(s) 56, 65, 124, 130, 199, 509, 583
BstNI CCWGG 4 cut(s) 25, 263, 555, 716
BstNSI RCATGY 3 cut(s) 65, 625, 751
BstSCI CCNGG 8 cut(s) 23, 113, 221, 261, 275, 352, 553, 714
BstSLI GKGCMC 3 cut(s) 228, 737, 766
BstUI CGCG 4 cut(s) 81, 480, 515, 586
BstV1I GCAGC 2 cut(s) 52, 155
BsuI GTATCC 1 cut(s) 703
BsuRI GGCC 2 cut(s) 17, 124
BtgI CCRYGG 1 cut(s) 96
BtrI CACGTC 1 cut(s) 508
BtsCI GGATG 1 cut(s) 133
BtsIMutI CAGTG 1 cut(s) 473
BtuMI TCGCGA 1 cut(s) 480
BveI ACCTGC 2 cut(s) 377, 401
Cac8I GCNNGC 8 cut(s) 11, 15, 32, 48, 63, 363, 579, 749
CfoI GCGC 3 cut(s) 61, 202, 254
Cfr13I GGNCC 3 cut(s) 219, 279, 534
CpoI CGGWCCG 1 cut(s) 279
CseI GACGC 4 cut(s) 70, 301, 325, 335
CsiI ACCWGGT 1 cut(s) 553
Csp6I GTAC 1 cut(s) 619
CspI CGGWCCG 1 cut(s) 279
CviAII CATG 4 cut(s) 62, 74, 622, 748
CviQI GTAC 1 cut(s) 619
DdeI CTNAG 1 cut(s) 372
DinI GGCGCC 1 cut(s) 253
DpnI GATC 4 cut(s) 78, 402, 518, 549
DpnII GATC 4 cut(s) 76, 400, 516, 547
EaeI YGGCCR 1 cut(s) 122
EciI GGCGGA 1 cut(s) 271
Eco130I CCWWGG 1 cut(s) 139
Eco24I GRGCYC 2 cut(s) 11, 238
Eco31I GGTCTC 1 cut(s) 587
Eco47I GGWCC 3 cut(s) 219, 279, 534
Eco88I CYCGRG 2 cut(s) 286, 804
EcoNI CCTNNNNNAGG 1 cut(s) 408
EcoRII CCWGG 4 cut(s) 23, 261, 553, 714
EcoT14I CCWWGG 1 cut(s) 139
EcoT38I GRGCYC 2 cut(s) 11, 238
EgeI GGCGCC 1 cut(s) 253
EheI GGCGCC 1 cut(s) 253
ErhI CCWWGG 1 cut(s) 139
Esp3I CGTCTC 2 cut(s) 47, 97
FaeI CATG 4 cut(s) 65, 77, 625, 751
FaiI YATR 6 cut(s) 63, 75, 104, 249, 623, 749
FaqI GGGAC 1 cut(s) 280
FatI CATG 4 cut(s) 61, 73, 621, 747
FauI CCCGC 1 cut(s) 18
FblI GTMKAC 2 cut(s) 84, 821
Fnu4HI GCNGC 6 cut(s) 66, 125, 128, 131, 169, 513
FokI GGATG 1 cut(s) 120
FriOI GRGCYC 2 cut(s) 11, 238
Fsp4HI GCNGC 6 cut(s) 66, 125, 128, 131, 169, 513
FspBI CTAG 1 cut(s) 627
GlaI GCGC 3 cut(s) 60, 201, 253
GluI GCNGC 6 cut(s) 66, 125, 128, 131, 169, 513
GsaI CCCAGC 1 cut(s) 346
HaeII RGCGCY 2 cut(s) 203, 255
HaeIII GGCC 2 cut(s) 17, 124
HapII CCGG 6 cut(s) 114, 222, 277, 301, 354, 532
HgaI GACGC 4 cut(s) 70, 301, 325, 335
HhaI GCGC 3 cut(s) 61, 202, 254
Hin1I GRCGYC 6 cut(s) 90, 252, 317, 327, 483, 652
Hin1II CATG 4 cut(s) 65, 77, 625, 751
Hin6I GCGC 3 cut(s) 59, 200, 252
HinP1I GCGC 3 cut(s) 59, 200, 252
HincII GTYRAC 2 cut(s) 85, 822
HindII GTYRAC 2 cut(s) 85, 822
HinfI GANTC 3 cut(s) 188, 333, 378
HpaII CCGG 6 cut(s) 114, 222, 277, 301, 354, 532
HphI GGTGA 3 cut(s) 232, 408, 521
Hpy166II GTNNAC 5 cut(s) 85, 416, 471, 735, 822
Hpy188I TCNGA 4 cut(s) 315, 521, 547, 697
Hpy188III TCNNGA 2 cut(s) 301, 479
Hpy8I GTNNAC 5 cut(s) 85, 416, 471, 735, 822
Hpy99I CGWCG 8 cut(s) 86, 89, 92, 329, 485, 488, 512, 728
HpyAV CCTTC 5 cut(s) 268, 414, 455, 795, 804
HpyCH4III ACNGT 1 cut(s) 724
HpyCH4IV ACGT 4 cut(s) 90, 483, 507, 652
HpyCH4V TGCA 6 cut(s) 171, 386, 601, 663, 735, 757
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 65, 124, 130, 199, 509, 583
HpyF3I CTNAG 1 cut(s) 372
HpySE526I ACGT 4 cut(s) 90, 483, 507, 652
Hsp92I GRCGYC 6 cut(s) 90, 252, 317, 327, 483, 652
Hsp92II CATG 4 cut(s) 65, 77, 625, 751
HspAI GCGC 3 cut(s) 59, 200, 252
KasI GGCGCC 1 cut(s) 251
Kpn2I TCCGGA 1 cut(s) 300
Kzo9I GATC 4 cut(s) 76, 400, 516, 547
LmnI GCTCC 2 cut(s) 6, 27
Lsp1109I GCAGC 2 cut(s) 52, 155
LweI GCATC 2 cut(s) 27, 142
MabI ACCWGGT 1 cut(s) 553
MaeI CTAG 1 cut(s) 627
MaeII ACGT 4 cut(s) 90, 483, 507, 652
MaeIII GTNAC 3 cut(s) 19, 367, 432
MalI GATC 4 cut(s) 78, 402, 518, 549
MboI GATC 4 cut(s) 76, 400, 516, 547
MhlI GDGCHC 7 cut(s) 11, 32, 228, 238, 610, 737, 766
MluCI AATT 3 cut(s) 148, 309, 645
Mly113I GGCGCC 1 cut(s) 252
MlyI GAGTC 1 cut(s) 182
MnlI CCTC 6 cut(s) 213, 254, 282, 295, 459, 821
MroI TCCGGA 1 cut(s) 300
MslI CAYNNNNRTG 2 cut(s) 35, 752
MspI CCGG 6 cut(s) 114, 222, 277, 301, 354, 532
MspR9I CCNGG 8 cut(s) 25, 115, 223, 263, 277, 354, 555, 716
Mva1269I GAATGC 2 cut(s) 171, 561
MvaI CCWGG 4 cut(s) 25, 263, 555, 716
MvnI CGCG 4 cut(s) 81, 480, 515, 586
MwoI GCNNNNNNNGC 7 cut(s) 56, 65, 124, 130, 199, 509, 583
NarI GGCGCC 1 cut(s) 252
NciI CCSGG 4 cut(s) 115, 223, 277, 354
NdeII GATC 4 cut(s) 76, 400, 516, 547
NlaIII CATG 4 cut(s) 65, 77, 625, 751
NlaIV GGNNCC 6 cut(s) 8, 220, 253, 582, 721, 832
NmeAIII GCCGAG 1 cut(s) 76
NruI TCGCGA 1 cut(s) 480
NspI RCATGY 3 cut(s) 65, 625, 751
PaeI GCATGC 2 cut(s) 65, 751
PaeR7I CTCGAG 1 cut(s) 286
PciI ACATGT 1 cut(s) 621
PcsI WCGNNNNNNNCGW 2 cut(s) 38, 489
PctI GAATGC 2 cut(s) 171, 561
PfeI GAWTC 2 cut(s) 333, 378
PflFI GACNNNGTC 2 cut(s) 89, 217
PkrI GCNGC 6 cut(s) 67, 126, 129, 132, 170, 514
PleI GAGTC 1 cut(s) 182
PluTI GGCGCC 1 cut(s) 255
PpsI GAGTC 1 cut(s) 182
PscI ACATGT 1 cut(s) 621
Psp6I CCWGG 4 cut(s) 23, 261, 553, 714
PspFI CCCAGC 1 cut(s) 342
PspGI CCWGG 4 cut(s) 23, 261, 553, 714
PspN4I GGNNCC 6 cut(s) 8, 220, 253, 582, 721, 832
PspPI GGNCC 3 cut(s) 219, 279, 534
PspXI VCTCGAGB 1 cut(s) 286
PsyI GACNNNGTC 2 cut(s) 89, 217
RruI TCGCGA 1 cut(s) 480
RsaI GTAC 1 cut(s) 620
RsaNI GTAC 1 cut(s) 619
RseI CAYNNNNRTG 2 cut(s) 35, 752
Rsr2I CGGWCCG 1 cut(s) 279
RsrII CGGWCCG 1 cut(s) 279
SalI GTCGAC 2 cut(s) 83, 820
SatI GCNGC 6 cut(s) 66, 125, 128, 131, 169, 513
Sau3AI GATC 4 cut(s) 76, 400, 516, 547
Sau96I GGNCC 3 cut(s) 219, 279, 534
SchI GAGTC 1 cut(s) 182
ScrFI CCNGG 8 cut(s) 25, 115, 223, 263, 277, 354, 555, 716
SduI GDGCHC 7 cut(s) 11, 32, 228, 238, 610, 737, 766
SexAI ACCWGGT 1 cut(s) 553
SfaNI GCATC 2 cut(s) 27, 142
SfoI GGCGCC 1 cut(s) 253
Sfr274I CTCGAG 1 cut(s) 286
SgrDI CGTCGACG 1 cut(s) 83
SinI GGWCC 3 cut(s) 219, 279, 534
SlaI CTCGAG 1 cut(s) 286
SmiMI CAYNNNNRTG 2 cut(s) 35, 752
SmlI CTYRAG 2 cut(s) 286, 337
SmoI CTYRAG 2 cut(s) 286, 337
SphI GCATGC 2 cut(s) 65, 751
Sse9I AATT 3 cut(s) 148, 309, 645
SspDI GGCGCC 1 cut(s) 251
SspMI CTAG 1 cut(s) 627
StyD4I CCNGG 8 cut(s) 23, 113, 221, 261, 275, 352, 553, 714
StyI CCWWGG 1 cut(s) 139
TaaI ACNGT 1 cut(s) 724
TaiI ACGT 4 cut(s) 93, 486, 510, 655
TaqI TCGA 4 cut(s) 84, 287, 393, 821
TasI AATT 3 cut(s) 148, 309, 645
TauI GCSGC 4 cut(s) 127, 130, 133, 515
TfiI GAWTC 2 cut(s) 333, 378
TscAI CASTG 1 cut(s) 473
TseI GCWGC 2 cut(s) 65, 168
TspGWI ACGGA 2 cut(s) 160, 437
TspRI CASTG 1 cut(s) 473
Tth111I GACNNNGTC 2 cut(s) 89, 217
VneI GTGCAC 1 cut(s) 733
VpaK11BI GGWCC 3 cut(s) 219, 279, 534
XagI CCTNNNNNAGG 1 cut(s) 408
XapI RAATTY 1 cut(s) 148
XceI RCATGY 3 cut(s) 65, 625, 751
XhoI CTCGAG 1 cut(s) 286
XmiI GTMKAC 2 cut(s) 84, 821
XspI CTAG 1 cut(s) 627
ZraI GACGTC 3 cut(s) 91, 484, 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.