Rroxscaffold_61G00450000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000061
OG0000037
Physical Location & Seq
Forward (+)
39810 .. 43327
3518 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_61G00450000.1

Sequence Viewer

Length: 1332 bp
ATGCTCACACTCGAACCCTTCTCGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAATGGGGAGCCCGCAGGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATCGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCTCGAGGACGCTTCTCCAGTACTACAATTCGGACGCCTTACGACGCCGCATTCTCAAGCCGGGCTATTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGACGGCGGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCTGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCAGCGTTGAAACATGTTCTCGGGTCGTTCTGCTAGGCAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCCTTTGACAACGCTGGCACCGCGTAGGGAGACCCTGCAACGAGCACAGCAGTCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAGGCATGCCAATGCAAGGGGCACAGGCACTACTACGATGTCCTTCCCCTAACCGAATGGCTCAGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

443

Amino Acids

48.89

Weight (kDa)

11.34

Isoelectric Point (pI)

63.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
AatII GACGTC 2 cut(s) 248, 1138
AccB1I GGYRCC 3 cut(s) 596, 1063, 1313
AccI GTMKAC 3 cut(s) 123, 239, 1304
AccII CGCG 3 cut(s) 236, 445, 1069
AccIII TCCGGA 1 cut(s) 806
AclWI GGATC 3 cut(s) 55, 68, 1038
AcoI YGGCCR 1 cut(s) 278
AcsI RAATTY 1 cut(s) 493
AcyI GRCGYC 5 cut(s) 245, 597, 665, 675, 1135
AfaI GTAC 4 cut(s) 449, 652, 869, 1103
AflIII ACRYGT 3 cut(s) 118, 980, 1104
AgsI TTSAA 7 cut(s) 144, 398, 421, 773, 835, 977, 1127
AjnI CCWGG 5 cut(s) 178, 606, 872, 1036, 1197
AleI CACNNNNGTG 1 cut(s) 858
AluBI AGCT 1 cut(s) 75
AluI AGCT 1 cut(s) 75
Alw21I GWGCWC 4 cut(s) 50, 187, 1093, 1220
Alw26I GTCTC 6 cut(s) 202, 252, 470, 808, 1070, 1175
Alw44I GTGCAC 2 cut(s) 46, 1216
AlwI GGATC 3 cut(s) 55, 68, 1038
Ama87I CYCGRG 4 cut(s) 269, 310, 633, 987
Aor13HI TCCGGA 1 cut(s) 806
AoxI GGCC 3 cut(s) 150, 170, 278
ApaLI GTGCAC 2 cut(s) 46, 1216
ApeKI GCWGC 2 cut(s) 220, 513
ApoI RAATTY 1 cut(s) 493
AspA2I CCTAGG 1 cut(s) 929
AspLEI GCGC 8 cut(s) 85, 216, 361, 547, 599, 848, 893, 945
AspS9I GGNCC 6 cut(s) 133, 150, 301, 325, 564, 624
AsuC2I CCSGG 6 cut(s) 270, 271, 568, 622, 692, 702
AsuHPI GGTGA 3 cut(s) 92, 577, 790
AvaI CYCGRG 4 cut(s) 269, 310, 633, 987
AvaII GGWCC 5 cut(s) 133, 301, 325, 564, 624
AvrII CCTAGG 1 cut(s) 929
BaeGI GKGCMC 4 cut(s) 50, 573, 1220, 1249
BamHI GGATCC 1 cut(s) 60
BanI GGYRCC 3 cut(s) 596, 1063, 1313
BanII GRGCYC 2 cut(s) 166, 583
BauI CACGAG 1 cut(s) 549
BbsI GAAGAC 1 cut(s) 780
Bbv12I GWGCWC 4 cut(s) 50, 187, 1093, 1220
BbvI GCAGC 2 cut(s) 207, 500
BccI CCATC 1 cut(s) 381
BceAI ACGGC 4 cut(s) 157, 227, 698, 827
BcgI CGANNNNNNTGC 4 cut(s) 103, 137, 1080, 1114
BciT130I CCWGG 5 cut(s) 180, 608, 874, 1038, 1199
BciVI GTATCC 1 cut(s) 1186
BcnI CCSGG 6 cut(s) 270, 271, 568, 622, 692, 702
BcoDI GTCTC 6 cut(s) 202, 252, 470, 808, 1070, 1175
BfaI CTAG 3 cut(s) 930, 1001, 1110
BfoI RGCGCY 2 cut(s) 548, 600
BfuI GTATCC 1 cut(s) 1186
BglI GCCNNNNNGGC 1 cut(s) 211
BisI GCNGC 8 cut(s) 221, 281, 284, 287, 367, 514, 678, 951
BlnI CCTAGG 1 cut(s) 929
BlsI GCNGC 8 cut(s) 222, 282, 285, 288, 368, 515, 679, 952
BmcAI AGTACT 1 cut(s) 652
Bme18I GGWCC 5 cut(s) 133, 301, 325, 564, 624
BmeT110I CYCGRG 4 cut(s) 269, 310, 633, 987
BmgT120I GGNCC 6 cut(s) 133, 150, 301, 325, 564, 624
BmiI GGNNCC 7 cut(s) 62, 163, 565, 598, 1065, 1204, 1315
BmsI GCATC 2 cut(s) 182, 370
BpiI GAAGAC 1 cut(s) 780
BpmI CTGGAG 1 cut(s) 631
Bpu10I CCTNAGC 2 cut(s) 731, 1287
BpuEI CTTGAG 1 cut(s) 670
BpuMI CCSGG 6 cut(s) 270, 271, 568, 622, 692, 702
BsaHI GRCGYC 5 cut(s) 245, 597, 665, 675, 1135
BsaI GGTCTC 2 cut(s) 470, 1070
BsaWI WCCGGW 1 cut(s) 806
BsaXI ACNNNNNCTCC 2 cut(s) 232, 262
Bse118I RCCGGY 2 cut(s) 327, 857
Bse1I ACTGG 2 cut(s) 648, 1028
BseAI TCCGGA 1 cut(s) 806
BseBI CCWGG 5 cut(s) 180, 608, 874, 1038, 1199
BseGI GGATG 2 cut(s) 346, 373
BseMII CTCAG 1 cut(s) 1301
BseNI ACTGG 2 cut(s) 648, 1028
BseSI GKGCMC 4 cut(s) 50, 573, 1220, 1249
BseXI GCAGC 2 cut(s) 207, 500
BseYI CCCAGC 1 cut(s) 968
Bsh1236I CGCG 3 cut(s) 236, 445, 1069
Bsh1285I CGRYCG 3 cut(s) 40, 354, 508
BshFI GGCC 3 cut(s) 152, 172, 280
BshNI GGYRCC 3 cut(s) 596, 1063, 1313
BsiEI CGRYCG 3 cut(s) 40, 354, 508
BsiHKAI GWGCWC 4 cut(s) 50, 187, 1093, 1220
BsiHKCI CYCGRG 4 cut(s) 269, 310, 633, 987
BsiSI CCGG 8 cut(s) 270, 328, 567, 622, 691, 702, 807, 858
BslFI GGGAC 1 cut(s) 625
BsmAI GTCTC 6 cut(s) 202, 252, 470, 808, 1070, 1175
BsmBI CGTCTC 3 cut(s) 202, 252, 808
BsmFI GGGAC 1 cut(s) 625
BsmI GAATGC 3 cut(s) 516, 680, 1044
BsnI GGCC 3 cut(s) 152, 172, 280
Bso31I GGTCTC 2 cut(s) 470, 1070
BsoBI CYCGRG 4 cut(s) 269, 310, 633, 987
Bsp1286I GDGCHC 8 cut(s) 50, 166, 187, 573, 583, 1093, 1220, 1249
Bsp13I TCCGGA 1 cut(s) 806
Bsp143I GATC 7 cut(s) 27, 60, 231, 505, 795, 884, 1030
BspANI GGCC 3 cut(s) 152, 172, 280
BspCNI CTCAG 1 cut(s) 1300
BspEI TCCGGA 1 cut(s) 806
BspFNI CGCG 3 cut(s) 236, 445, 1069
BspLI GGNNCC 7 cut(s) 62, 163, 565, 598, 1065, 1204, 1315
BspPI GGATC 3 cut(s) 55, 68, 1038
BspT107I GGYRCC 3 cut(s) 596, 1063, 1313
BspTNI GGTCTC 2 cut(s) 470, 1070
BsrFI RCCGGY 2 cut(s) 327, 857
BsrI ACTGG 2 cut(s) 648, 1028
BssAI RCCGGY 2 cut(s) 327, 857
BssMI GATC 7 cut(s) 27, 60, 231, 505, 795, 884, 1030
BssNI GRCGYC 5 cut(s) 245, 597, 665, 675, 1135
BssSI CACGAG 1 cut(s) 549
BssT1I CCWWGG 4 cut(s) 129, 484, 841, 929
Bst2BI CACGAG 1 cut(s) 549
Bst2UI CCWGG 5 cut(s) 180, 608, 874, 1038, 1199
Bst4CI ACNGT 4 cut(s) 301, 340, 802, 1207
BstACI GRCGYC 5 cut(s) 245, 597, 665, 675, 1135
BstC8I GCNNGC 9 cut(s) 166, 170, 187, 203, 218, 711, 895, 1062, 1232
BstDEI CTNAG 3 cut(s) 720, 731, 1287
BstDSI CCRYGG 1 cut(s) 251
BstF5I GGATG 2 cut(s) 346, 373
BstFNI CGCG 3 cut(s) 236, 445, 1069
BstH2I RGCGCY 2 cut(s) 548, 600
BstHHI GCGC 8 cut(s) 85, 216, 361, 547, 599, 848, 893, 945
BstKTI GATC 7 cut(s) 30, 63, 234, 508, 798, 887, 1033
BstMAI GTCTC 6 cut(s) 202, 252, 470, 808, 1070, 1175
BstMBI GATC 7 cut(s) 27, 60, 231, 505, 795, 884, 1030
BstMCI CGRYCG 3 cut(s) 40, 354, 508
BstMWI GCNNNNNNNGC 7 cut(s) 211, 220, 280, 286, 544, 854, 1066
BstNI CCWGG 5 cut(s) 180, 608, 874, 1038, 1199
BstNSI RCATGY 5 cut(s) 122, 220, 984, 1108, 1234
BstSLI GKGCMC 4 cut(s) 50, 573, 1220, 1249
BstUI CGCG 3 cut(s) 236, 445, 1069
BstV1I GCAGC 2 cut(s) 207, 500
BstV2I GAAGAC 1 cut(s) 780
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
BsuI GTATCC 1 cut(s) 1186
BsuRI GGCC 3 cut(s) 152, 172, 280
BtgI CCRYGG 1 cut(s) 251
BtgZI GCGATG 1 cut(s) 347
BtsCI GGATG 2 cut(s) 346, 373
Cac8I GCNNGC 9 cut(s) 166, 170, 187, 203, 218, 711, 895, 1062, 1232
CfoI GCGC 8 cut(s) 85, 216, 361, 547, 599, 848, 893, 945
Cfr10I RCCGGY 2 cut(s) 327, 857
Cfr13I GGNCC 6 cut(s) 133, 150, 301, 325, 564, 624
Cfr9I CCCGGG 1 cut(s) 269
CpoI CGGWCCG 2 cut(s) 325, 624
CseI GACGC 4 cut(s) 225, 648, 673, 683
CsiI ACCWGGT 1 cut(s) 1036
Csp6I GTAC 4 cut(s) 448, 651, 868, 1102
CspI CGGWCCG 2 cut(s) 325, 624
CviAII CATG 6 cut(s) 119, 217, 229, 981, 1105, 1231
CviQI GTAC 4 cut(s) 448, 651, 868, 1102
DdeI CTNAG 3 cut(s) 720, 731, 1287
DinI GGCGCC 1 cut(s) 598
DpnI GATC 7 cut(s) 29, 62, 233, 507, 797, 886, 1032
DpnII GATC 7 cut(s) 27, 60, 231, 505, 795, 884, 1030
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 1 cut(s) 278
EciI GGCGGA 3 cut(s) 338, 616, 952
Eco130I CCWWGG 4 cut(s) 129, 484, 841, 929
Eco24I GRGCYC 2 cut(s) 166, 583
Eco31I GGTCTC 2 cut(s) 470, 1070
Eco32I GATATC 1 cut(s) 742
Eco47I GGWCC 5 cut(s) 133, 301, 325, 564, 624
Eco88I CYCGRG 4 cut(s) 269, 310, 633, 987
EcoRII CCWGG 5 cut(s) 178, 606, 872, 1036, 1197
EcoRV GATATC 1 cut(s) 742
EcoT14I CCWWGG 4 cut(s) 129, 484, 841, 929
EcoT38I GRGCYC 2 cut(s) 166, 583
EgeI GGCGCC 1 cut(s) 598
EheI GGCGCC 1 cut(s) 598
ErhI CCWWGG 4 cut(s) 129, 484, 841, 929
Esp3I CGTCTC 3 cut(s) 202, 252, 808
FaeI CATG 6 cut(s) 122, 220, 232, 984, 1108, 1234
FaqI GGGAC 1 cut(s) 625
FatI CATG 6 cut(s) 118, 216, 228, 980, 1104, 1230
FauI CCCGC 5 cut(s) 59, 72, 173, 797, 807
FauNDI CATATG 1 cut(s) 1015
FblI GTMKAC 3 cut(s) 123, 239, 1304
Fnu4HI GCNGC 8 cut(s) 221, 281, 284, 287, 367, 514, 678, 951
FokI GGATG 2 cut(s) 333, 360
FriOI GRGCYC 2 cut(s) 166, 583
Fsp4HI GCNGC 8 cut(s) 221, 281, 284, 287, 367, 514, 678, 951
FspBI CTAG 3 cut(s) 930, 1001, 1110
GlaI GCGC 8 cut(s) 84, 215, 360, 546, 598, 847, 892, 944
GluI GCNGC 8 cut(s) 221, 281, 284, 287, 367, 514, 678, 951
GsaI CCCAGC 1 cut(s) 972
GsuI CTGGAG 1 cut(s) 631
HaeII RGCGCY 2 cut(s) 548, 600
HaeIII GGCC 3 cut(s) 152, 172, 280
HapII CCGG 8 cut(s) 270, 328, 567, 622, 691, 702, 807, 858
HgaI GACGC 4 cut(s) 225, 648, 673, 683
HhaI GCGC 8 cut(s) 85, 216, 361, 547, 599, 848, 893, 945
Hin1I GRCGYC 5 cut(s) 245, 597, 665, 675, 1135
Hin1II CATG 6 cut(s) 122, 220, 232, 984, 1108, 1234
Hin6I GCGC 8 cut(s) 83, 214, 359, 545, 597, 846, 891, 943
HinP1I GCGC 8 cut(s) 83, 214, 359, 545, 597, 846, 891, 943
HincII GTYRAC 4 cut(s) 108, 124, 240, 1305
HindII GTYRAC 4 cut(s) 108, 124, 240, 1305
HinfI GANTC 7 cut(s) 109, 125, 313, 410, 533, 726, 755
HpaII CCGG 8 cut(s) 270, 328, 567, 622, 691, 702, 807, 858
HphI GGTGA 3 cut(s) 92, 577, 790
Hpy166II GTNNAC 7 cut(s) 48, 108, 124, 240, 304, 1218, 1305
Hpy188I TCNGA 3 cut(s) 351, 663, 1180
Hpy188III TCNNGA 5 cut(s) 22, 144, 387, 633, 807
Hpy8I GTNNAC 7 cut(s) 48, 108, 124, 240, 304, 1218, 1305
Hpy99I CGWCG 6 cut(s) 241, 244, 247, 677, 782, 1211
HpyAV CCTTC 4 cut(s) 28, 613, 1278, 1287
HpyCH4III ACNGT 4 cut(s) 301, 340, 802, 1207
HpyCH4IV ACGT 2 cut(s) 245, 1135
HpyCH4V TGCA 7 cut(s) 48, 516, 907, 1084, 1146, 1218, 1240
HpyF10VI GCNNNNNNNGC 7 cut(s) 211, 220, 280, 286, 544, 854, 1066
HpyF3I CTNAG 3 cut(s) 720, 731, 1287
HpySE526I ACGT 2 cut(s) 245, 1135
Hsp92I GRCGYC 5 cut(s) 245, 597, 665, 675, 1135
Hsp92II CATG 6 cut(s) 122, 220, 232, 984, 1108, 1234
HspAI GCGC 8 cut(s) 83, 214, 359, 545, 597, 846, 891, 943
KasI GGCGCC 1 cut(s) 596
Kpn2I TCCGGA 1 cut(s) 806
Kzo9I GATC 7 cut(s) 27, 60, 231, 505, 795, 884, 1030
LmnI GCTCC 2 cut(s) 161, 182
Lsp1109I GCAGC 2 cut(s) 207, 500
LweI GCATC 2 cut(s) 182, 370
MabI ACCWGGT 1 cut(s) 1036
MaeI CTAG 3 cut(s) 930, 1001, 1110
MaeII ACGT 2 cut(s) 245, 1135
MaeIII GTNAC 4 cut(s) 174, 295, 334, 715
MalI GATC 7 cut(s) 29, 62, 233, 507, 797, 886, 1032
MboI GATC 7 cut(s) 27, 60, 231, 505, 795, 884, 1030
MboII GAAGA 2 cut(s) 37, 785
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 8 cut(s) 50, 166, 187, 573, 583, 1093, 1220, 1249
MluCI AATT 5 cut(s) 392, 493, 657, 849, 1128
Mly113I GGCGCC 1 cut(s) 597
MlyI GAGTC 6 cut(s) 103, 119, 322, 404, 527, 764
MmeI TCCRAC 1 cut(s) 374
MroI TCCGGA 1 cut(s) 806
MseI TTAA 1 cut(s) 96
MslI CAYNNNNRTG 4 cut(s) 190, 858, 902, 1235
MspI CCGG 8 cut(s) 270, 328, 567, 622, 691, 702, 807, 858
Mva1269I GAATGC 3 cut(s) 516, 680, 1044
MvaI CCWGG 5 cut(s) 180, 608, 874, 1038, 1199
MvnI CGCG 3 cut(s) 236, 445, 1069
MwoI GCNNNNNNNGC 7 cut(s) 211, 220, 280, 286, 544, 854, 1066
NarI GGCGCC 1 cut(s) 597
NciI CCSGG 6 cut(s) 270, 271, 568, 622, 692, 702
NdeI CATATG 1 cut(s) 1015
NdeII GATC 7 cut(s) 27, 60, 231, 505, 795, 884, 1030
NlaIII CATG 6 cut(s) 122, 220, 232, 984, 1108, 1234
NlaIV GGNNCC 7 cut(s) 62, 163, 565, 598, 1065, 1204, 1315
NmeAIII GCCGAG 3 cut(s) 231, 761, 776
NmuCI GTSAC 1 cut(s) 334
NspI RCATGY 5 cut(s) 122, 220, 984, 1108, 1234
OliI CACNNNNGTG 1 cut(s) 858
PaeI GCATGC 2 cut(s) 220, 1234
PaeR7I CTCGAG 1 cut(s) 633
PciI ACATGT 3 cut(s) 118, 980, 1104
PcsI WCGNNNNNNNCGW 1 cut(s) 193
PctI GAATGC 3 cut(s) 516, 680, 1044
PfeI GAWTC 1 cut(s) 726
PflFI GACNNNGTC 2 cut(s) 244, 562
PkrI GCNGC 8 cut(s) 222, 282, 285, 288, 368, 515, 679, 952
Ple19I CGATCG 1 cut(s) 508
PleI GAGTC 6 cut(s) 103, 119, 321, 404, 527, 763
PluTI GGCGCC 1 cut(s) 600
PpsI GAGTC 6 cut(s) 103, 119, 321, 404, 527, 763
PscI ACATGT 3 cut(s) 118, 980, 1104
Psp6I CCWGG 5 cut(s) 178, 606, 872, 1036, 1197
PspFI CCCAGC 1 cut(s) 968
PspGI CCWGG 5 cut(s) 178, 606, 872, 1036, 1197
PspN4I GGNNCC 7 cut(s) 62, 163, 565, 598, 1065, 1204, 1315
PspPI GGNCC 6 cut(s) 133, 150, 301, 325, 564, 624
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 2 cut(s) 244, 562
PvuI CGATCG 1 cut(s) 508
RsaI GTAC 4 cut(s) 449, 652, 869, 1103
RsaNI GTAC 4 cut(s) 448, 651, 868, 1102
RseI CAYNNNNRTG 4 cut(s) 190, 858, 902, 1235
Rsr2I CGGWCCG 2 cut(s) 325, 624
RsrII CGGWCCG 2 cut(s) 325, 624
SalI GTCGAC 3 cut(s) 122, 238, 1303
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 8 cut(s) 221, 281, 284, 287, 367, 514, 678, 951
Sau3AI GATC 7 cut(s) 27, 60, 231, 505, 795, 884, 1030
Sau96I GGNCC 6 cut(s) 133, 150, 301, 325, 564, 624
ScaI AGTACT 1 cut(s) 652
SchI GAGTC 6 cut(s) 103, 119, 322, 404, 527, 764
SduI GDGCHC 8 cut(s) 50, 166, 187, 573, 583, 1093, 1220, 1249
SetI ASST 7 cut(s) 36, 77, 248, 1042, 1138, 1200, 1217
SexAI ACCWGGT 1 cut(s) 1036
SfaNI GCATC 2 cut(s) 182, 370
SfoI GGCGCC 1 cut(s) 598
Sfr274I CTCGAG 1 cut(s) 633
SgrAI CRCCGGYG 1 cut(s) 857
SgrDI CGTCGACG 1 cut(s) 238
SinI GGWCC 5 cut(s) 133, 301, 325, 564, 624
SlaI CTCGAG 1 cut(s) 633
SmaI CCCGGG 1 cut(s) 271
SmiMI CAYNNNNRTG 4 cut(s) 190, 858, 902, 1235
SmlI CTYRAG 2 cut(s) 633, 685
SmoI CTYRAG 2 cut(s) 633, 685
SphI GCATGC 2 cut(s) 220, 1234
SrfI GCCCGGGC 1 cut(s) 271
Sse9I AATT 5 cut(s) 392, 493, 657, 849, 1128
SspDI GGCGCC 1 cut(s) 596
SspMI CTAG 3 cut(s) 930, 1001, 1110
StyI CCWWGG 4 cut(s) 129, 484, 841, 929
TaaI ACNGT 4 cut(s) 301, 340, 802, 1207
TaiI ACGT 2 cut(s) 248, 1138
TaqI TCGA 8 cut(s) 12, 23, 123, 239, 316, 634, 883, 1304
TaqII GACCGA 3 cut(s) 26, 368, 452
TasI AATT 5 cut(s) 392, 493, 657, 849, 1128
TatI WGTACW 1 cut(s) 650
TauI GCSGC 6 cut(s) 283, 286, 289, 369, 680, 953
TfiI GAWTC 1 cut(s) 726
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TseFI GTSAC 1 cut(s) 334
TseI GCWGC 2 cut(s) 220, 513
Tsp45I GTSAC 1 cut(s) 334
TspDTI ATGAA 2 cut(s) 421, 819
TspGWI ACGGA 4 cut(s) 125, 283, 505, 734
TspMI CCCGGG 1 cut(s) 269
Tth111I GACNNNGTC 2 cut(s) 244, 562
VneI GTGCAC 2 cut(s) 46, 1216
VpaK11BI GGWCC 5 cut(s) 133, 301, 325, 564, 624
XapI RAATTY 1 cut(s) 493
XceI RCATGY 5 cut(s) 122, 220, 984, 1108, 1234
XhoI CTCGAG 1 cut(s) 633
XmaI CCCGGG 1 cut(s) 269
XmaJI CCTAGG 1 cut(s) 929
XmiI GTMKAC 3 cut(s) 123, 239, 1304
XspI CTAG 3 cut(s) 930, 1001, 1110
ZraI GACGTC 2 cut(s) 246, 1136
ZrmI AGTACT 1 cut(s) 652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.