Rroxscaffold_107G00442530

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000107
OG0000037
Physical Location & Seq
Forward (+)
55478 .. 58809
3332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_107G00442530.1

Sequence Viewer

Length: 1446 bp
ATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCTGAGGACGCTTCTCCAGACTACAATTCGGACGCCTTACGACGCCAGATTCTCAAGCTGGGCTATTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTAAAGCACTCGATCAACACGAGCGCACGACAGGAAACCGAGGTTTGACAACCACCGATTGTCGTGGCGTTGGTCGCCGAGGACTTGGTATTTATGCCAACCGCGTGACTGAGCACACGGGAGGCCATCATCCGTCCCATCCAACTCCCGAGGGGGTTGGGGGGGGGCAACGACGTGTGACGCCCAGGCAGACGTGCCCTCGGCCTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCCGGGACGGCGGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCTGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCAGCGTTGAAACATGTTCTCGGGTCGTTCTGCTAGGCAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCCTTTGACAACGCTGGCACCGCGTAGGGAGACCCTGCAACGAGCACAGCAGTCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAGGCATGCCAATGCAAGGGGCACAGGCACTACTACGATGTCCTTCCCCTAACCGAATGGCTCAGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

481

Amino Acids

52.1

Weight (kDa)

11.08

Isoelectric Point (pI)

53.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 57, 1252
AccB1I GGYRCC 3 cut(s) 406, 1177, 1427
AccI GTMKAC 2 cut(s) 48, 1418
AccII CGCG 4 cut(s) 45, 255, 642, 1183
AclWI GGATC 1 cut(s) 1152
AcoI YGGCCR 1 cut(s) 87
AcsI RAATTY 1 cut(s) 303
AcyI GRCGYC 6 cut(s) 54, 407, 473, 483, 719, 1249
AfaI GTAC 3 cut(s) 259, 983, 1217
AfiI CCNNNNNNNGG 8 cut(s) 85, 319, 417, 418, 419, 920, 1326, 1355
AflIII ACRYGT 3 cut(s) 712, 1094, 1218
AgsI TTSAA 7 cut(s) 208, 231, 771, 886, 949, 1091, 1241
AjiI CACGTC 2 cut(s) 713, 732
AjnI CCWGG 5 cut(s) 416, 722, 986, 1150, 1311
AleI CACNNNNGTG 1 cut(s) 972
AluBI AGCT 1 cut(s) 498
AluI AGCT 1 cut(s) 498
Alw21I GWGCWC 3 cut(s) 654, 1207, 1334
Alw26I GTCTC 6 cut(s) 11, 61, 280, 921, 1184, 1289
Alw44I GTGCAC 1 cut(s) 1330
AlwI GGATC 1 cut(s) 1152
Ama87I CYCGRG 4 cut(s) 78, 119, 686, 1101
AoxI GGCC 4 cut(s) 87, 177, 661, 740
ApaLI GTGCAC 1 cut(s) 1330
ApeKI GCWGC 2 cut(s) 29, 323
ApoI RAATTY 1 cut(s) 303
AspA2I CCTAGG 1 cut(s) 1043
AspLEI GCGC 9 cut(s) 25, 170, 357, 409, 564, 759, 962, 1007, 1059
AspS9I GGNCC 5 cut(s) 110, 134, 178, 374, 434
AsuC2I CCSGG 6 cut(s) 79, 80, 378, 432, 510, 921
AsuHPI GGTGA 2 cut(s) 387, 903
AvaI CYCGRG 4 cut(s) 78, 119, 686, 1101
AvaII GGWCC 4 cut(s) 110, 134, 374, 434
AvrII CCTAGG 1 cut(s) 1043
BaeGI GKGCMC 4 cut(s) 383, 737, 1334, 1363
BanI GGYRCC 3 cut(s) 406, 1177, 1427
BanII GRGCYC 1 cut(s) 393
BauI CACGAG 2 cut(s) 359, 557
BbsI GAAGAC 1 cut(s) 893
Bbv12I GWGCWC 3 cut(s) 654, 1207, 1334
BbvI GCAGC 2 cut(s) 16, 310
BccI CCATC 4 cut(s) 191, 672, 684, 774
BceAI ACGGC 3 cut(s) 36, 506, 941
BcgI CGANNNNNNTGC 2 cut(s) 1194, 1228
BciT130I CCWGG 5 cut(s) 418, 724, 988, 1152, 1313
BciVI GTATCC 1 cut(s) 1300
BcnI CCSGG 6 cut(s) 79, 80, 378, 432, 510, 921
BcoDI GTCTC 6 cut(s) 11, 61, 280, 921, 1184, 1289
BfaI CTAG 3 cut(s) 1044, 1115, 1224
BfoI RGCGCY 2 cut(s) 358, 410
BfuI GTATCC 1 cut(s) 1300
BglI GCCNNNNNGGC 1 cut(s) 20
BisI GCNGC 6 cut(s) 30, 90, 93, 96, 324, 1065
BlnI CCTAGG 1 cut(s) 1043
BlsI GCNGC 6 cut(s) 31, 91, 94, 97, 325, 1066
Bme18I GGWCC 4 cut(s) 110, 134, 374, 434
BmeT110I CYCGRG 4 cut(s) 78, 119, 686, 1101
BmgBI CACGTC 2 cut(s) 713, 732
BmgT120I GGNCC 5 cut(s) 110, 134, 178, 374, 434
BmiI GGNNCC 6 cut(s) 180, 375, 408, 1179, 1318, 1429
BmsI GCATC 2 cut(s) 179, 829
BpiI GAAGAC 1 cut(s) 893
BpmI CTGGAG 1 cut(s) 440
Bpu10I CCTNAGC 1 cut(s) 1401
BpuEI CTTGAG 1 cut(s) 478
BpuMI CCSGG 6 cut(s) 79, 80, 378, 432, 510, 921
Bsa29I ATCGAT 1 cut(s) 837
BsaHI GRCGYC 6 cut(s) 54, 407, 473, 483, 719, 1249
BsaI GGTCTC 2 cut(s) 280, 1184
BsaXI ACNNNNNCTCC 2 cut(s) 41, 71
Bsc4I CCNNNNNNNGG 8 cut(s) 85, 319, 417, 418, 419, 920, 1326, 1355
Bse118I RCCGGY 3 cut(s) 136, 175, 971
Bse1I ACTGG 1 cut(s) 1142
BseBI CCWGG 5 cut(s) 418, 724, 988, 1152, 1313
BseCI ATCGAT 1 cut(s) 837
BseGI GGATG 4 cut(s) 155, 183, 667, 676
BseLI CCNNNNNNNGG 8 cut(s) 85, 319, 417, 418, 419, 920, 1326, 1355
BseMII CTCAG 3 cut(s) 434, 639, 1415
BseNI ACTGG 1 cut(s) 1142
BseSI GKGCMC 4 cut(s) 383, 737, 1334, 1363
BseXI GCAGC 2 cut(s) 16, 310
BseYI CCCAGC 2 cut(s) 498, 1082
Bsh1236I CGCG 4 cut(s) 45, 255, 642, 1183
Bsh1285I CGRYCG 1 cut(s) 163
BshFI GGCC 4 cut(s) 89, 179, 663, 742
BshNI GGYRCC 3 cut(s) 406, 1177, 1427
BshVI ATCGAT 1 cut(s) 837
BsiEI CGRYCG 1 cut(s) 163
BsiHKAI GWGCWC 3 cut(s) 654, 1207, 1334
BsiHKCI CYCGRG 4 cut(s) 78, 119, 686, 1101
BsiSI CCGG 8 cut(s) 79, 137, 176, 377, 432, 510, 920, 972
BslFI GGGAC 3 cut(s) 435, 658, 936
BslI CCNNNNNNNGG 8 cut(s) 85, 319, 417, 418, 419, 920, 1326, 1355
BsmAI GTCTC 6 cut(s) 11, 61, 280, 921, 1184, 1289
BsmBI CGTCTC 3 cut(s) 11, 61, 921
BsmFI GGGAC 3 cut(s) 435, 658, 936
BsmI GAATGC 2 cut(s) 326, 1158
BsnI GGCC 4 cut(s) 89, 179, 663, 742
Bso31I GGTCTC 2 cut(s) 280, 1184
BsoBI CYCGRG 4 cut(s) 78, 119, 686, 1101
Bsp1286I GDGCHC 7 cut(s) 383, 393, 654, 737, 1207, 1334, 1363
Bsp143I GATC 5 cut(s) 40, 550, 908, 998, 1144
BspANI GGCC 4 cut(s) 89, 179, 663, 742
BspCNI CTCAG 3 cut(s) 435, 640, 1414
BspDI ATCGAT 1 cut(s) 837
BspFNI CGCG 4 cut(s) 45, 255, 642, 1183
BspLI GGNNCC 6 cut(s) 180, 375, 408, 1179, 1318, 1429
BspPI GGATC 1 cut(s) 1152
BspT107I GGYRCC 3 cut(s) 406, 1177, 1427
BspTNI GGTCTC 2 cut(s) 280, 1184
BsrFI RCCGGY 3 cut(s) 136, 175, 971
BsrI ACTGG 1 cut(s) 1142
BssAI RCCGGY 3 cut(s) 136, 175, 971
BssMI GATC 5 cut(s) 40, 550, 908, 998, 1144
BssNI GRCGYC 6 cut(s) 54, 407, 473, 483, 719, 1249
BssSI CACGAG 2 cut(s) 359, 557
BssT1I CCWWGG 3 cut(s) 294, 955, 1043
Bst2BI CACGAG 2 cut(s) 359, 557
Bst2UI CCWGG 5 cut(s) 418, 724, 988, 1152, 1313
Bst4CI ACNGT 4 cut(s) 110, 149, 915, 1321
BstACI GRCGYC 6 cut(s) 54, 407, 473, 483, 719, 1249
BstC8I GCNNGC 7 cut(s) 12, 27, 177, 519, 1009, 1176, 1346
BstDEI CTNAG 4 cut(s) 443, 528, 648, 1401
BstDSI CCRYGG 1 cut(s) 60
BstF5I GGATG 4 cut(s) 155, 183, 667, 676
BstFNI CGCG 4 cut(s) 45, 255, 642, 1183
BstH2I RGCGCY 2 cut(s) 358, 410
BstHHI GCGC 9 cut(s) 25, 170, 357, 409, 564, 759, 962, 1007, 1059
BstKTI GATC 5 cut(s) 43, 553, 911, 1001, 1147
BstMAI GTCTC 6 cut(s) 11, 61, 280, 921, 1184, 1289
BstMBI GATC 5 cut(s) 40, 550, 908, 998, 1144
BstMCI CGRYCG 1 cut(s) 163
BstNI CCWGG 5 cut(s) 418, 724, 988, 1152, 1313
BstNSI RCATGY 4 cut(s) 29, 1098, 1222, 1348
BstSLI GKGCMC 4 cut(s) 383, 737, 1334, 1363
BstUI CGCG 4 cut(s) 45, 255, 642, 1183
BstV1I GCAGC 2 cut(s) 16, 310
BstV2I GAAGAC 1 cut(s) 893
Bsu15I ATCGAT 1 cut(s) 837
BsuI GTATCC 1 cut(s) 1300
BsuRI GGCC 4 cut(s) 89, 179, 663, 742
BsuTUI ATCGAT 1 cut(s) 837
BtgI CCRYGG 1 cut(s) 60
BtgZI GCGATG 1 cut(s) 156
BtrI CACGTC 2 cut(s) 713, 732
BtsCI GGATG 4 cut(s) 155, 183, 667, 676
Cac8I GCNNGC 7 cut(s) 12, 27, 177, 519, 1009, 1176, 1346
CfoI GCGC 9 cut(s) 25, 170, 357, 409, 564, 759, 962, 1007, 1059
Cfr10I RCCGGY 3 cut(s) 136, 175, 971
Cfr13I GGNCC 5 cut(s) 110, 134, 178, 374, 434
Cfr9I CCCGGG 1 cut(s) 78
ClaI ATCGAT 1 cut(s) 837
CpoI CGGWCCG 2 cut(s) 134, 434
CseI GACGC 5 cut(s) 34, 457, 481, 491, 727
CsiI ACCWGGT 1 cut(s) 1150
Csp6I GTAC 3 cut(s) 258, 982, 1216
CspI CGGWCCG 2 cut(s) 134, 434
CviAII CATG 5 cut(s) 26, 38, 1095, 1219, 1345
CviQI GTAC 3 cut(s) 258, 982, 1216
DdeI CTNAG 4 cut(s) 443, 528, 648, 1401
DinI GGCGCC 1 cut(s) 408
DpnI GATC 5 cut(s) 42, 552, 910, 1000, 1146
DpnII GATC 5 cut(s) 40, 550, 908, 998, 1144
EaeI YGGCCR 1 cut(s) 87
EciI GGCGGA 3 cut(s) 147, 426, 1066
Eco130I CCWWGG 3 cut(s) 294, 955, 1043
Eco24I GRGCYC 1 cut(s) 393
Eco31I GGTCTC 2 cut(s) 280, 1184
Eco32I GATATC 1 cut(s) 855
Eco47I GGWCC 4 cut(s) 110, 134, 374, 434
Eco88I CYCGRG 4 cut(s) 78, 119, 686, 1101
EcoRII CCWGG 5 cut(s) 416, 722, 986, 1150, 1311
EcoRV GATATC 1 cut(s) 855
EcoT14I CCWWGG 3 cut(s) 294, 955, 1043
EcoT38I GRGCYC 1 cut(s) 393
EgeI GGCGCC 1 cut(s) 408
EheI GGCGCC 1 cut(s) 408
ErhI CCWWGG 3 cut(s) 294, 955, 1043
Esp3I CGTCTC 3 cut(s) 11, 61, 921
FaeI CATG 5 cut(s) 29, 41, 1098, 1222, 1348
FaqI GGGAC 3 cut(s) 435, 658, 936
FatI CATG 5 cut(s) 25, 37, 1094, 1218, 1344
FauI CCCGC 2 cut(s) 910, 921
FauNDI CATATG 1 cut(s) 1129
FblI GTMKAC 2 cut(s) 48, 1418
Fnu4HI GCNGC 6 cut(s) 30, 90, 93, 96, 324, 1065
FokI GGATG 4 cut(s) 142, 170, 654, 663
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 6 cut(s) 30, 90, 93, 96, 324, 1065
FspBI CTAG 3 cut(s) 1044, 1115, 1224
GlaI GCGC 9 cut(s) 24, 169, 356, 408, 563, 758, 961, 1006, 1058
GluI GCNGC 6 cut(s) 30, 90, 93, 96, 324, 1065
GsaI CCCAGC 2 cut(s) 502, 1086
GsuI CTGGAG 1 cut(s) 440
HaeII RGCGCY 2 cut(s) 358, 410
HaeIII GGCC 4 cut(s) 89, 179, 663, 742
HapII CCGG 8 cut(s) 79, 137, 176, 377, 432, 510, 920, 972
HgaI GACGC 5 cut(s) 34, 457, 481, 491, 727
HhaI GCGC 9 cut(s) 25, 170, 357, 409, 564, 759, 962, 1007, 1059
Hin1I GRCGYC 6 cut(s) 54, 407, 473, 483, 719, 1249
Hin1II CATG 5 cut(s) 29, 41, 1098, 1222, 1348
Hin6I GCGC 9 cut(s) 23, 168, 355, 407, 562, 757, 960, 1005, 1057
HinP1I GCGC 9 cut(s) 23, 168, 355, 407, 562, 757, 960, 1005, 1057
HincII GTYRAC 2 cut(s) 49, 1419
HindII GTYRAC 2 cut(s) 49, 1419
HinfI GANTC 8 cut(s) 122, 220, 343, 489, 534, 775, 792, 868
HpaII CCGG 8 cut(s) 79, 137, 176, 377, 432, 510, 920, 972
HphI GGTGA 2 cut(s) 387, 903
Hpy166II GTNNAC 5 cut(s) 49, 113, 786, 1332, 1419
Hpy188I TCNGA 4 cut(s) 160, 444, 471, 1294
Hpy188III TCNNGA 3 cut(s) 197, 457, 686
Hpy8I GTNNAC 5 cut(s) 49, 113, 786, 1332, 1419
Hpy99I CGWCG 7 cut(s) 50, 53, 56, 485, 714, 895, 1325
HpyAV CCTTC 3 cut(s) 423, 1392, 1401
HpyCH4III ACNGT 4 cut(s) 110, 149, 915, 1321
HpyCH4IV ACGT 5 cut(s) 54, 712, 731, 827, 1249
HpyCH4V TGCA 7 cut(s) 326, 798, 1021, 1198, 1260, 1332, 1354
HpyF3I CTNAG 4 cut(s) 443, 528, 648, 1401
HpySE526I ACGT 5 cut(s) 54, 712, 731, 827, 1249
Hsp92I GRCGYC 6 cut(s) 54, 407, 473, 483, 719, 1249
Hsp92II CATG 5 cut(s) 29, 41, 1098, 1222, 1348
HspAI GCGC 9 cut(s) 23, 168, 355, 407, 562, 757, 960, 1005, 1057
KasI GGCGCC 1 cut(s) 406
KroI GCCGGC 1 cut(s) 175
KroNI GCCGGC 1 cut(s) 177
Kzo9I GATC 5 cut(s) 40, 550, 908, 998, 1144
Lsp1109I GCAGC 2 cut(s) 16, 310
LweI GCATC 2 cut(s) 179, 829
MabI ACCWGGT 1 cut(s) 1150
MaeI CTAG 3 cut(s) 1044, 1115, 1224
MaeII ACGT 5 cut(s) 54, 712, 731, 827, 1249
MaeIII GTNAC 5 cut(s) 104, 143, 523, 643, 715
MalI GATC 5 cut(s) 42, 552, 910, 1000, 1146
MboI GATC 5 cut(s) 40, 550, 908, 998, 1144
MboII GAAGA 2 cut(s) 823, 898
MhlI GDGCHC 7 cut(s) 383, 393, 654, 737, 1207, 1334, 1363
MluCI AATT 6 cut(s) 202, 303, 465, 799, 963, 1242
Mly113I GGCGCC 1 cut(s) 407
MlyI GAGTC 5 cut(s) 131, 214, 337, 769, 877
MmeI TCCRAC 2 cut(s) 183, 704
MroNI GCCGGC 1 cut(s) 175
MseI TTAA 1 cut(s) 540
MslI CAYNNNNRTG 3 cut(s) 972, 1016, 1349
MspI CCGG 8 cut(s) 79, 137, 176, 377, 432, 510, 920, 972
Mva1269I GAATGC 2 cut(s) 326, 1158
MvaI CCWGG 5 cut(s) 418, 724, 988, 1152, 1313
MvnI CGCG 4 cut(s) 45, 255, 642, 1183
NaeI GCCGGC 1 cut(s) 177
NarI GGCGCC 1 cut(s) 407
NciI CCSGG 6 cut(s) 79, 80, 378, 432, 510, 921
NdeI CATATG 1 cut(s) 1129
NdeII GATC 5 cut(s) 40, 550, 908, 998, 1144
NgoMIV GCCGGC 1 cut(s) 175
NlaIII CATG 5 cut(s) 29, 41, 1098, 1222, 1348
NlaIV GGNNCC 6 cut(s) 180, 375, 408, 1179, 1318, 1429
NmeAIII GCCGAG 5 cut(s) 40, 641, 718, 874, 889
NmuCI GTSAC 3 cut(s) 143, 643, 715
NspI RCATGY 4 cut(s) 29, 1098, 1222, 1348
OliI CACNNNNGTG 1 cut(s) 972
PaeI GCATGC 2 cut(s) 29, 1348
PciI ACATGT 2 cut(s) 1094, 1218
PcsI WCGNNNNNNNCGW 1 cut(s) 555
PctI GAATGC 2 cut(s) 326, 1158
PdiI GCCGGC 1 cut(s) 177
PfeI GAWTC 3 cut(s) 489, 534, 792
PflFI GACNNNGTC 2 cut(s) 53, 372
PfoI TCCNGGA 1 cut(s) 919
PkrI GCNGC 6 cut(s) 31, 91, 94, 97, 325, 1066
PleI GAGTC 5 cut(s) 130, 214, 337, 769, 876
PluTI GGCGCC 1 cut(s) 410
PpsI GAGTC 5 cut(s) 130, 214, 337, 769, 876
PscI ACATGT 2 cut(s) 1094, 1218
Psp6I CCWGG 5 cut(s) 416, 722, 986, 1150, 1311
PspFI CCCAGC 2 cut(s) 498, 1082
PspGI CCWGG 5 cut(s) 416, 722, 986, 1150, 1311
PspN4I GGNNCC 6 cut(s) 180, 375, 408, 1179, 1318, 1429
PspPI GGNCC 5 cut(s) 110, 134, 178, 374, 434
PsyI GACNNNGTC 2 cut(s) 53, 372
RsaI GTAC 3 cut(s) 259, 983, 1217
RsaNI GTAC 3 cut(s) 258, 982, 1216
RseI CAYNNNNRTG 3 cut(s) 972, 1016, 1349
Rsr2I CGGWCCG 2 cut(s) 134, 434
RsrII CGGWCCG 2 cut(s) 134, 434
SalI GTCGAC 2 cut(s) 47, 1417
SaqAI TTAA 1 cut(s) 540
SatI GCNGC 6 cut(s) 30, 90, 93, 96, 324, 1065
Sau3AI GATC 5 cut(s) 40, 550, 908, 998, 1144
Sau96I GGNCC 5 cut(s) 110, 134, 178, 374, 434
SchI GAGTC 5 cut(s) 131, 214, 337, 769, 877
SduI GDGCHC 7 cut(s) 383, 393, 654, 737, 1207, 1334, 1363
SexAI ACCWGGT 1 cut(s) 1150
SfaNI GCATC 2 cut(s) 179, 829
SfoI GGCGCC 1 cut(s) 408
SgrAI CRCCGGYG 1 cut(s) 971
SgrDI CGTCGACG 1 cut(s) 47
SinI GGWCC 4 cut(s) 110, 134, 374, 434
SmaI CCCGGG 1 cut(s) 80
SmiMI CAYNNNNRTG 3 cut(s) 972, 1016, 1349
SmlI CTYRAG 1 cut(s) 493
SmoI CTYRAG 1 cut(s) 493
SphI GCATGC 2 cut(s) 29, 1348
SrfI GCCCGGGC 1 cut(s) 80
Sse9I AATT 6 cut(s) 202, 303, 465, 799, 963, 1242
SspDI GGCGCC 1 cut(s) 406
SspMI CTAG 3 cut(s) 1044, 1115, 1224
StyI CCWWGG 3 cut(s) 294, 955, 1043
TaaI ACNGT 4 cut(s) 110, 149, 915, 1321
TaiI ACGT 5 cut(s) 57, 715, 734, 830, 1252
TaqI TCGA 7 cut(s) 48, 125, 549, 778, 837, 997, 1418
TaqII GACCGA 2 cut(s) 177, 262
TasI AATT 6 cut(s) 202, 303, 465, 799, 963, 1242
TauI GCSGC 4 cut(s) 92, 95, 98, 1067
TfiI GAWTC 3 cut(s) 489, 534, 792
Tru1I TTAA 1 cut(s) 540
Tru9I TTAA 1 cut(s) 540
TseFI GTSAC 3 cut(s) 143, 643, 715
TseI GCWGC 2 cut(s) 29, 323
Tsp45I GTSAC 3 cut(s) 143, 643, 715
TspDTI ATGAA 3 cut(s) 231, 823, 933
TspGWI ACGGA 4 cut(s) 92, 315, 660, 847
TspMI CCCGGG 1 cut(s) 78
Tth111I GACNNNGTC 2 cut(s) 53, 372
VneI GTGCAC 1 cut(s) 1330
VpaK11BI GGWCC 4 cut(s) 110, 134, 374, 434
XapI RAATTY 1 cut(s) 303
XceI RCATGY 4 cut(s) 29, 1098, 1222, 1348
XmaI CCCGGG 1 cut(s) 78
XmaJI CCTAGG 1 cut(s) 1043
XmiI GTMKAC 2 cut(s) 48, 1418
XspI CTAG 3 cut(s) 1044, 1115, 1224
ZraI GACGTC 2 cut(s) 55, 1250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.