Rroxscaffold_93G00440980

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000093
OG0000037
Physical Location & Seq
Forward (+)
119554 .. 122858
3305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_93G00440980.1

Sequence Viewer

Length: 819 bp
ATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATCGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACAACGGGGCTCTCACCCTCTATGGCGCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCTCGAGGACGCTTCTCCGACTACAATTCGGACGCCTTACGACGCCAGATTCTCAAGCCGGGCTATTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGATCAACCAGGTAGCATTCCTTTGACAACGCTGGCACCGCGTAGGGAGACCCTGCAACGAGCACAGCAGTCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAGGCATGCCAATGCAAGGGGCACAGCACTACTACGATGTCCTTCCCCTAACCGAATGGCTCAGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

272

Amino Acids

29.63

Weight (kDa)

9.82

Isoelectric Point (pI)

64.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 32, 622
AccB1I GGYRCC 3 cut(s) 380, 547, 796
AccI GTMKAC 2 cut(s) 23, 787
AccII CGCG 3 cut(s) 20, 229, 553
AcoI YGGCCR 1 cut(s) 62
AcsI RAATTY 1 cut(s) 277
AcyI GRCGYC 5 cut(s) 29, 381, 446, 456, 619
AfaI GTAC 2 cut(s) 233, 587
AfiI CCNNNNNNNGG 7 cut(s) 60, 293, 390, 391, 392, 696, 725
AflIII ACRYGT 1 cut(s) 588
AgsI TTSAA 3 cut(s) 182, 205, 611
AjnI CCWGG 3 cut(s) 389, 520, 681
Alw21I GWGCWC 2 cut(s) 577, 704
Alw26I GTCTC 4 cut(s) 36, 254, 554, 659
Alw44I GTGCAC 1 cut(s) 700
Ama87I CYCGRG 3 cut(s) 53, 94, 416
AoxI GGCC 1 cut(s) 62
ApaLI GTGCAC 1 cut(s) 700
ApeKI GCWGC 2 cut(s) 4, 297
ApoI RAATTY 1 cut(s) 277
AspLEI GCGC 3 cut(s) 145, 331, 383
AspS9I GGNCC 4 cut(s) 85, 109, 348, 407
AsuC2I CCSGG 6 cut(s) 54, 55, 352, 405, 473, 483
AsuHPI GGTGA 1 cut(s) 361
AvaI CYCGRG 3 cut(s) 53, 94, 416
AvaII GGWCC 4 cut(s) 85, 109, 348, 407
BaeGI GKGCMC 3 cut(s) 357, 704, 733
BanI GGYRCC 3 cut(s) 380, 547, 796
BanII GRGCYC 1 cut(s) 367
BauI CACGAG 1 cut(s) 333
Bbv12I GWGCWC 2 cut(s) 577, 704
BbvI GCAGC 1 cut(s) 284
BccI CCATC 1 cut(s) 165
BceAI ACGGC 1 cut(s) 479
BcgI CGANNNNNNTGC 2 cut(s) 564, 598
BciT130I CCWGG 3 cut(s) 391, 522, 683
BciVI GTATCC 1 cut(s) 670
BclI TGATCA 1 cut(s) 514
BcnI CCSGG 6 cut(s) 54, 55, 352, 405, 473, 483
BcoDI GTCTC 4 cut(s) 36, 254, 554, 659
BfaI CTAG 1 cut(s) 594
BfoI RGCGCY 2 cut(s) 332, 384
BfuI GTATCC 1 cut(s) 670
BisI GCNGC 6 cut(s) 5, 65, 68, 71, 151, 298
BlsI GCNGC 6 cut(s) 6, 66, 69, 72, 152, 299
Bme1390I CCNGG 9 cut(s) 54, 55, 352, 391, 405, 473, 483, 522, 683
Bme18I GGWCC 4 cut(s) 85, 109, 348, 407
BmeT110I CYCGRG 3 cut(s) 53, 94, 416
BmgT120I GGNCC 4 cut(s) 85, 109, 348, 407
BmiI GGNNCC 5 cut(s) 349, 382, 549, 688, 798
BmrFI CCNGG 9 cut(s) 54, 55, 352, 391, 405, 473, 483, 522, 683
BmsI GCATC 1 cut(s) 154
Bpu10I CCTNAGC 1 cut(s) 770
BpuEI CTTGAG 1 cut(s) 451
BpuMI CCSGG 6 cut(s) 54, 55, 352, 405, 473, 483
BsaHI GRCGYC 5 cut(s) 29, 381, 446, 456, 619
BsaI GGTCTC 2 cut(s) 254, 554
BsaJI CCNNGG 6 cut(s) 35, 53, 138, 268, 390, 682
BsaXI ACNNNNNCTCC 2 cut(s) 16, 46
Bsc4I CCNNNNNNNGG 7 cut(s) 60, 293, 390, 391, 392, 696, 725
Bse118I RCCGGY 1 cut(s) 111
BseBI CCWGG 3 cut(s) 391, 522, 683
BseDI CCNNGG 6 cut(s) 35, 53, 138, 268, 390, 682
BseGI GGATG 2 cut(s) 130, 157
BseLI CCNNNNNNNGG 7 cut(s) 60, 293, 390, 391, 392, 696, 725
BseMII CTCAG 1 cut(s) 784
BseSI GKGCMC 3 cut(s) 357, 704, 733
BseXI GCAGC 1 cut(s) 284
Bsh1236I CGCG 3 cut(s) 20, 229, 553
Bsh1285I CGRYCG 2 cut(s) 138, 292
BshFI GGCC 1 cut(s) 64
BshNI GGYRCC 3 cut(s) 380, 547, 796
BsiEI CGRYCG 2 cut(s) 138, 292
BsiHKAI GWGCWC 2 cut(s) 577, 704
BsiHKCI CYCGRG 3 cut(s) 53, 94, 416
BsiSI CCGG 6 cut(s) 54, 112, 351, 405, 472, 483
BslFI GGGAC 1 cut(s) 408
BslI CCNNNNNNNGG 7 cut(s) 60, 293, 390, 391, 392, 696, 725
BsmAI GTCTC 4 cut(s) 36, 254, 554, 659
BsmBI CGTCTC 1 cut(s) 36
BsmFI GGGAC 1 cut(s) 408
BsmI GAATGC 2 cut(s) 300, 528
BsnI GGCC 1 cut(s) 64
Bso31I GGTCTC 2 cut(s) 254, 554
BsoBI CYCGRG 3 cut(s) 53, 94, 416
Bsp1286I GDGCHC 5 cut(s) 357, 367, 577, 704, 733
Bsp143I GATC 3 cut(s) 15, 289, 514
BspANI GGCC 1 cut(s) 64
BspCNI CTCAG 1 cut(s) 783
BspFNI CGCG 3 cut(s) 20, 229, 553
BspLI GGNNCC 5 cut(s) 349, 382, 549, 688, 798
BspT107I GGYRCC 3 cut(s) 380, 547, 796
BspTNI GGTCTC 2 cut(s) 254, 554
BsrFI RCCGGY 1 cut(s) 111
BssAI RCCGGY 1 cut(s) 111
BssECI CCNNGG 6 cut(s) 35, 53, 138, 268, 390, 682
BssMI GATC 3 cut(s) 15, 289, 514
BssNI GRCGYC 5 cut(s) 29, 381, 446, 456, 619
BssSI CACGAG 1 cut(s) 333
BssT1I CCWWGG 1 cut(s) 268
Bst2BI CACGAG 1 cut(s) 333
Bst2UI CCWGG 3 cut(s) 391, 522, 683
Bst4CI ACNGT 3 cut(s) 85, 124, 691
BstACI GRCGYC 5 cut(s) 29, 381, 446, 456, 619
BstC8I GCNNGC 3 cut(s) 492, 546, 716
BstDEI CTNAG 2 cut(s) 501, 770
BstDSI CCRYGG 1 cut(s) 35
BstF5I GGATG 2 cut(s) 130, 157
BstFNI CGCG 3 cut(s) 20, 229, 553
BstH2I RGCGCY 2 cut(s) 332, 384
BstHHI GCGC 3 cut(s) 145, 331, 383
BstKTI GATC 3 cut(s) 18, 292, 517
BstMAI GTCTC 4 cut(s) 36, 254, 554, 659
BstMBI GATC 3 cut(s) 15, 289, 514
BstMCI CGRYCG 2 cut(s) 138, 292
BstMWI GCNNNNNNNGC 4 cut(s) 64, 70, 328, 550
BstNI CCWGG 3 cut(s) 391, 522, 683
BstNSI RCATGY 2 cut(s) 592, 718
BstSCI CCNGG 9 cut(s) 52, 53, 350, 389, 403, 471, 481, 520, 681
BstSLI GKGCMC 3 cut(s) 357, 704, 733
BstUI CGCG 3 cut(s) 20, 229, 553
BstV1I GCAGC 1 cut(s) 284
BsuI GTATCC 1 cut(s) 670
BsuRI GGCC 1 cut(s) 64
BtgI CCRYGG 1 cut(s) 35
BtgZI GCGATG 1 cut(s) 131
BtsCI GGATG 2 cut(s) 130, 157
Cac8I GCNNGC 3 cut(s) 492, 546, 716
CfoI GCGC 3 cut(s) 145, 331, 383
Cfr10I RCCGGY 1 cut(s) 111
Cfr13I GGNCC 4 cut(s) 85, 109, 348, 407
Cfr9I CCCGGG 1 cut(s) 53
CpoI CGGWCCG 2 cut(s) 109, 407
CseI GACGC 4 cut(s) 9, 431, 454, 464
CsiI ACCWGGT 1 cut(s) 520
Csp6I GTAC 2 cut(s) 232, 586
CspI CGGWCCG 2 cut(s) 109, 407
CviAII CATG 3 cut(s) 13, 589, 715
CviQI GTAC 2 cut(s) 232, 586
DdeI CTNAG 2 cut(s) 501, 770
DinI GGCGCC 1 cut(s) 382
DpnI GATC 3 cut(s) 17, 291, 516
DpnII GATC 3 cut(s) 15, 289, 514
EaeI YGGCCR 1 cut(s) 62
EciI GGCGGA 2 cut(s) 122, 399
Eco130I CCWWGG 1 cut(s) 268
Eco24I GRGCYC 1 cut(s) 367
Eco31I GGTCTC 2 cut(s) 254, 554
Eco47I GGWCC 4 cut(s) 85, 109, 348, 407
Eco88I CYCGRG 3 cut(s) 53, 94, 416
EcoRII CCWGG 3 cut(s) 389, 520, 681
EcoT14I CCWWGG 1 cut(s) 268
EcoT38I GRGCYC 1 cut(s) 367
EgeI GGCGCC 1 cut(s) 382
EheI GGCGCC 1 cut(s) 382
ErhI CCWWGG 1 cut(s) 268
Esp3I CGTCTC 1 cut(s) 36
FaeI CATG 3 cut(s) 16, 592, 718
FaiI YATR 5 cut(s) 14, 43, 378, 590, 716
FaqI GGGAC 1 cut(s) 408
FatI CATG 3 cut(s) 12, 588, 714
FbaI TGATCA 1 cut(s) 514
FblI GTMKAC 2 cut(s) 23, 787
Fnu4HI GCNGC 6 cut(s) 5, 65, 68, 71, 151, 298
FokI GGATG 2 cut(s) 117, 144
FriOI GRGCYC 1 cut(s) 367
Fsp4HI GCNGC 6 cut(s) 5, 65, 68, 71, 151, 298
FspBI CTAG 1 cut(s) 594
GlaI GCGC 3 cut(s) 144, 330, 382
GluI GCNGC 6 cut(s) 5, 65, 68, 71, 151, 298
HaeII RGCGCY 2 cut(s) 332, 384
HaeIII GGCC 1 cut(s) 64
HapII CCGG 6 cut(s) 54, 112, 351, 405, 472, 483
HgaI GACGC 4 cut(s) 9, 431, 454, 464
HhaI GCGC 3 cut(s) 145, 331, 383
Hin1I GRCGYC 5 cut(s) 29, 381, 446, 456, 619
Hin1II CATG 3 cut(s) 16, 592, 718
Hin6I GCGC 3 cut(s) 143, 329, 381
HinP1I GCGC 3 cut(s) 143, 329, 381
HincII GTYRAC 2 cut(s) 24, 788
HindII GTYRAC 2 cut(s) 24, 788
HinfI GANTC 5 cut(s) 97, 194, 317, 462, 507
HpaII CCGG 6 cut(s) 54, 112, 351, 405, 472, 483
HphI GGTGA 1 cut(s) 361
Hpy166II GTNNAC 4 cut(s) 24, 88, 702, 788
Hpy188I TCNGA 4 cut(s) 135, 432, 444, 664
Hpy188III TCNNGA 2 cut(s) 171, 416
Hpy8I GTNNAC 4 cut(s) 24, 88, 702, 788
Hpy99I CGWCG 5 cut(s) 25, 28, 31, 458, 695
HpyAV CCTTC 3 cut(s) 396, 761, 770
HpyCH4III ACNGT 3 cut(s) 85, 124, 691
HpyCH4IV ACGT 2 cut(s) 29, 619
HpyCH4V TGCA 5 cut(s) 300, 568, 630, 702, 724
HpyF10VI GCNNNNNNNGC 4 cut(s) 64, 70, 328, 550
HpyF3I CTNAG 2 cut(s) 501, 770
HpySE526I ACGT 2 cut(s) 29, 619
Hsp92I GRCGYC 5 cut(s) 29, 381, 446, 456, 619
Hsp92II CATG 3 cut(s) 16, 592, 718
HspAI GCGC 3 cut(s) 143, 329, 381
KasI GGCGCC 1 cut(s) 380
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 3 cut(s) 15, 289, 514
Lsp1109I GCAGC 1 cut(s) 284
LweI GCATC 1 cut(s) 154
MabI ACCWGGT 1 cut(s) 520
MaeI CTAG 1 cut(s) 594
MaeII ACGT 2 cut(s) 29, 619
MaeIII GTNAC 3 cut(s) 79, 118, 496
MalI GATC 3 cut(s) 17, 291, 516
MboI GATC 3 cut(s) 15, 289, 514
MhlI GDGCHC 5 cut(s) 357, 367, 577, 704, 733
MluCI AATT 4 cut(s) 176, 277, 438, 612
Mly113I GGCGCC 1 cut(s) 381
MlyI GAGTC 3 cut(s) 106, 188, 311
MmeI TCCRAC 2 cut(s) 158, 455
MnlI CCTC 8 cut(s) 133, 178, 235, 342, 383, 412, 423, 787
MslI CAYNNNNRTG 1 cut(s) 719
MspI CCGG 6 cut(s) 54, 112, 351, 405, 472, 483
MspR9I CCNGG 9 cut(s) 54, 55, 352, 391, 405, 473, 483, 522, 683
Mva1269I GAATGC 2 cut(s) 300, 528
MvaI CCWGG 3 cut(s) 391, 522, 683
MvnI CGCG 3 cut(s) 20, 229, 553
MwoI GCNNNNNNNGC 4 cut(s) 64, 70, 328, 550
NarI GGCGCC 1 cut(s) 381
NciI CCSGG 6 cut(s) 54, 55, 352, 405, 473, 483
NdeII GATC 3 cut(s) 15, 289, 514
NlaIII CATG 3 cut(s) 16, 592, 718
NlaIV GGNNCC 5 cut(s) 349, 382, 549, 688, 798
NmuCI GTSAC 1 cut(s) 118
NspI RCATGY 2 cut(s) 592, 718
PaeI GCATGC 1 cut(s) 718
PaeR7I CTCGAG 1 cut(s) 416
PciI ACATGT 1 cut(s) 588
PctI GAATGC 2 cut(s) 300, 528
PfeI GAWTC 2 cut(s) 462, 507
PflFI GACNNNGTC 2 cut(s) 28, 346
PkrI GCNGC 6 cut(s) 6, 66, 69, 72, 152, 299
Ple19I CGATCG 1 cut(s) 292
PleI GAGTC 3 cut(s) 105, 188, 311
PluTI GGCGCC 1 cut(s) 384
PpsI GAGTC 3 cut(s) 105, 188, 311
PscI ACATGT 1 cut(s) 588
Psp6I CCWGG 3 cut(s) 389, 520, 681
PspGI CCWGG 3 cut(s) 389, 520, 681
PspN4I GGNNCC 5 cut(s) 349, 382, 549, 688, 798
PspPI GGNCC 4 cut(s) 85, 109, 348, 407
PsyI GACNNNGTC 2 cut(s) 28, 346
PvuI CGATCG 1 cut(s) 292
RsaI GTAC 2 cut(s) 233, 587
RsaNI GTAC 2 cut(s) 232, 586
RseI CAYNNNNRTG 1 cut(s) 719
Rsr2I CGGWCCG 2 cut(s) 109, 407
RsrII CGGWCCG 2 cut(s) 109, 407
SalI GTCGAC 2 cut(s) 22, 786
SatI GCNGC 6 cut(s) 5, 65, 68, 71, 151, 298
Sau3AI GATC 3 cut(s) 15, 289, 514
Sau96I GGNCC 4 cut(s) 85, 109, 348, 407
SchI GAGTC 3 cut(s) 106, 188, 311
ScrFI CCNGG 9 cut(s) 54, 55, 352, 391, 405, 473, 483, 522, 683
SduI GDGCHC 5 cut(s) 357, 367, 577, 704, 733
SetI ASST 6 cut(s) 32, 526, 622, 684, 701, 818
SexAI ACCWGGT 1 cut(s) 520
SfaNI GCATC 1 cut(s) 154
SfoI GGCGCC 1 cut(s) 382
Sfr274I CTCGAG 1 cut(s) 416
SgrDI CGTCGACG 1 cut(s) 22
SinI GGWCC 4 cut(s) 85, 109, 348, 407
SlaI CTCGAG 1 cut(s) 416
SmaI CCCGGG 1 cut(s) 55
SmiMI CAYNNNNRTG 1 cut(s) 719
SmlI CTYRAG 2 cut(s) 416, 466
SmoI CTYRAG 2 cut(s) 416, 466
SphI GCATGC 1 cut(s) 718
SrfI GCCCGGGC 1 cut(s) 55
Sse9I AATT 4 cut(s) 176, 277, 438, 612
SspDI GGCGCC 1 cut(s) 380
SspMI CTAG 1 cut(s) 594
StyD4I CCNGG 9 cut(s) 52, 53, 350, 389, 403, 471, 481, 520, 681
StyI CCWWGG 1 cut(s) 268
TaaI ACNGT 3 cut(s) 85, 124, 691
TaiI ACGT 2 cut(s) 32, 622
TaqI TCGA 4 cut(s) 23, 100, 417, 787
TaqII GACCGA 2 cut(s) 152, 236
TasI AATT 4 cut(s) 176, 277, 438, 612
TauI GCSGC 4 cut(s) 67, 70, 73, 153
TfiI GAWTC 2 cut(s) 462, 507
TseFI GTSAC 1 cut(s) 118
TseI GCWGC 2 cut(s) 4, 297
Tsp45I GTSAC 1 cut(s) 118
TspDTI ATGAA 1 cut(s) 205
TspGWI ACGGA 2 cut(s) 67, 289
TspMI CCCGGG 1 cut(s) 53
Tth111I GACNNNGTC 2 cut(s) 28, 346
VneI GTGCAC 1 cut(s) 700
VpaK11BI GGWCC 4 cut(s) 85, 109, 348, 407
XapI RAATTY 1 cut(s) 277
XceI RCATGY 2 cut(s) 592, 718
XhoI CTCGAG 1 cut(s) 416
XmaI CCCGGG 1 cut(s) 53
XmiI GTMKAC 2 cut(s) 23, 787
XspI CTAG 1 cut(s) 594
ZraI GACGTC 2 cut(s) 30, 620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.