Rroxscaffold_12G00450630

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000012
OG0000037
Physical Location & Seq
Reverse (-)
18697 .. 21729
3033 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_12G00450630.1

Sequence Viewer

Length: 1095 bp
ATGGCGCCCCCTTCCAGGGGACTTGTTCCCGGTCCGCCTCTGAGGACGCTTCTCCAGACTACAATTCGGACGCCTTACGACGCCAGATTCTCAAGCTGGGCTATTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTAAAGCACTCGATCAACACGAGCGCACGACAGGAAACCGAGGTTTGACAACCACCGATTGTCGTGGCGTTGGTCGCCGAGGACTTGGTATTTATGCCAACCGCGTGACTGAGCACACGGGAGGCCCATCATCCGTCCCATCCAACTCCCGAGGGGGTTGGGGGGGGGCAACGACGTGTGACGCCCCAGGCAGACGTGCCCTCGGCCTAATGGCTTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTTAGACATATTGAAGACGACGAAACCACCCGCACGATCACCGTCTCGGGACGGCGGGGGAACGCTCTTTCATTCAAGTTCCTTGGCGCAATTCACGCCGGTGTTCAGTACGCCTGGGAGGGTCGATCAAGCGCAAGCACCGAAATGCAACACGCAAGACACTTGCCTCCTAGGATAAGGGGGCGCAGAGCCGCAAGACCCTCCGCCCCCAGCGTTGAAACATGTTCTCGGGATCAACCAGGTAGCATTCCTTTGACAACGCTGGCACCGCGTAGGGAGACCCTGCAACGAGCACAGCAGTCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAAGGCATGCCAATGCAAGGGGCACAGGCACTACTACGATGTCCTTCCCTAACCGAATGGCTCAGGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAGGTAGCAAATACAGGAATCCATTCAAAGCACAAGAAATTCTTGATGCATCACTGACGTGGAGCATGCGCGGACGGTTCAATGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

364

Amino Acids

39.86

Weight (kDa)

10.78

Isoelectric Point (pI)

52.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000037)

Species Orthologous Gene IDs
pyrus_communis pycom12555g00040 pycom12555g00090 pycom2132g00020 pycom2247g00020 pycom2303g00010 pycom2303g00070 pycom2303g00140 pycom2575g00040 pycom520g01330 pycom553g00030 pycom961g00020
rosa_laevigata RLG00000005153 RLG00000005811 RLG00000030826 RLG00000030829
rosa_multiflora Rmu_sc0001696.1_g000004
rosa_roxburghii Rroxscaffold_100G00451140 Rroxscaffold_100G00451150 Rroxscaffold_100G00451160 Rroxscaffold_102G00450910 Rroxscaffold_102G00450930 Rroxscaffold_103G00450540 Rroxscaffold_103G00450580 Rroxscaffold_103G00450590 Rroxscaffold_104G00444650 Rroxscaffold_104G00444700 Rroxscaffold_104G00444730 Rroxscaffold_104G00444770 Rroxscaffold_104G00444780 Rroxscaffold_104G00444820 Rroxscaffold_104G00444850 Rroxscaffold_104G00444890 Rroxscaffold_105G00447110 Rroxscaffold_105G00447150 Rroxscaffold_105G00447200 Rroxscaffold_105G00447210 Rroxscaffold_105G00447240 Rroxscaffold_105G00447250 Rroxscaffold_106G00451440 Rroxscaffold_106G00451450 Rroxscaffold_107G00442420 Rroxscaffold_107G00442430 Rroxscaffold_107G00442460 Rroxscaffold_107G00442490 Rroxscaffold_107G00442500 Rroxscaffold_107G00442530 Rroxscaffold_107G00442580 Rroxscaffold_107G00442610 Rroxscaffold_107G00442670 Rroxscaffold_108G00451460 Rroxscaffold_108G00451470 Rroxscaffold_110G00451500 Rroxscaffold_110G00451520 Rroxscaffold_111G00451570 Rroxscaffold_112G00451600 Rroxscaffold_113G00451610 Rroxscaffold_113G00451640 Rroxscaffold_114G00451660 Rroxscaffold_114G00451670 Rroxscaffold_115G00451700 Rroxscaffold_116G00451720 Rroxscaffold_117G00451760 Rroxscaffold_118G00451790 Rroxscaffold_118G00451800 Rroxscaffold_120G00451830 Rroxscaffold_122G00451890 Rroxscaffold_122G00451900 Rroxscaffold_123G00451930 Rroxscaffold_125G00451980 Rroxscaffold_126G00452010 Rroxscaffold_127G00452020 Rroxscaffold_127G00452030 Rroxscaffold_128G00452070 Rroxscaffold_12G00450630 Rroxscaffold_138G00452200 Rroxscaffold_139G00452210 Rroxscaffold_13G00448640 Rroxscaffold_13G00448680 Rroxscaffold_13G00448690 Rroxscaffold_14G00441900 Rroxscaffold_14G00441910 Rroxscaffold_14G00441920 Rroxscaffold_14G00441940 Rroxscaffold_14G00441980 Rroxscaffold_14G00441990 Rroxscaffold_14G00442000 Rroxscaffold_14G00442020 Rroxscaffold_14G00442040 Rroxscaffold_15G00447480 Rroxscaffold_15G00447520 Rroxscaffold_15G00447530 Rroxscaffold_15G00447590 Rroxscaffold_15G00447600 Rroxscaffold_162G00450740 Rroxscaffold_162G00450760 Rroxscaffold_16G00446220 Rroxscaffold_16G00446260 Rroxscaffold_17G00435370 Rroxscaffold_17G00435380 Rroxscaffold_17G00435420 Rroxscaffold_17G00435520 Rroxscaffold_17G00435540 Rroxscaffold_17G00435580 Rroxscaffold_17G00435610 Rroxscaffold_17G00435690 Rroxscaffold_17G00435710 Rroxscaffold_17G00435720 Rroxscaffold_17G00435770 Rroxscaffold_17G00435790 Rroxscaffold_17G00435850 Rroxscaffold_17G00435880 Rroxscaffold_18G00446040 Rroxscaffold_18G00446050 Rroxscaffold_18G00446070 Rroxscaffold_18G00446100 Rroxscaffold_18G00446140 Rroxscaffold_18G00446150 Rroxscaffold_18G00446180 Rroxscaffold_18G00446190 Rroxscaffold_19G00448870 Rroxscaffold_19G00448880 Rroxscaffold_19G00448900 Rroxscaffold_19G00448910 Rroxscaffold_19G00448960 Rroxscaffold_19G00448980 Rroxscaffold_1G00000030 Rroxscaffold_1G00000040 Rroxscaffold_1G00000060 Rroxscaffold_1G00000080 Rroxscaffold_20G00445050 Rroxscaffold_20G00445090 Rroxscaffold_20G00445120 Rroxscaffold_21G00439420 Rroxscaffold_21G00439450 Rroxscaffold_21G00439480 Rroxscaffold_21G00439510 Rroxscaffold_21G00439550 Rroxscaffold_21G00439600 Rroxscaffold_21G00439650 Rroxscaffold_22G00439870 Rroxscaffold_22G00439890 Rroxscaffold_22G00439900 Rroxscaffold_22G00439930 Rroxscaffold_22G00439970 Rroxscaffold_22G00440020 Rroxscaffold_23G00451030 Rroxscaffold_23G00451060 Rroxscaffold_24G00444940 Rroxscaffold_24G00444980 Rroxscaffold_24G00445020 Rroxscaffold_25G00450150 Rroxscaffold_25G00450180 Rroxscaffold_25G00450190 Rroxscaffold_26G00447750 Rroxscaffold_26G00447800 Rroxscaffold_26G00447810 Rroxscaffold_26G00447820 Rroxscaffold_27G00446580 Rroxscaffold_28G00446880 Rroxscaffold_28G00446890 Rroxscaffold_28G00446900 Rroxscaffold_28G00446920 Rroxscaffold_29G00441580 Rroxscaffold_29G00441610 Rroxscaffold_29G00441620 Rroxscaffold_29G00441650 Rroxscaffold_29G00441660 Rroxscaffold_29G00441700 Rroxscaffold_29G00441720 Rroxscaffold_29G00441770 Rroxscaffold_29G00441790 Rroxscaffold_29G00441800 Rroxscaffold_29G00441840 Rroxscaffold_29G00441880 Rroxscaffold_30G00449470 Rroxscaffold_31G00438090 Rroxscaffold_31G00438100 Rroxscaffold_31G00438150 Rroxscaffold_31G00438160 Rroxscaffold_31G00438200 Rroxscaffold_31G00438240 Rroxscaffold_31G00438280 Rroxscaffold_32G00442770 Rroxscaffold_32G00442780 Rroxscaffold_32G00442820 Rroxscaffold_33G00439680 Rroxscaffold_33G00439750 Rroxscaffold_33G00439780 Rroxscaffold_33G00439790 Rroxscaffold_33G00439830 Rroxscaffold_34G00443130 Rroxscaffold_34G00443160 Rroxscaffold_34G00443190 Rroxscaffold_34G00443240 Rroxscaffold_34G00443260 Rroxscaffold_34G00443300 Rroxscaffold_34G00443320 Rroxscaffold_34G00443340 Rroxscaffold_34G00443350 Rroxscaffold_34G00443360 Rroxscaffold_34G00443380 Rroxscaffold_35G00441020 Rroxscaffold_35G00441030 Rroxscaffold_35G00441040 Rroxscaffold_35G00441070 Rroxscaffold_35G00441100 Rroxscaffold_35G00441130 Rroxscaffold_35G00441150 Rroxscaffold_35G00441200 Rroxscaffold_35G00441240 Rroxscaffold_35G00441250 Rroxscaffold_35G00441270 Rroxscaffold_36G00440060 Rroxscaffold_36G00440090 Rroxscaffold_36G00440130 Rroxscaffold_36G00440180 Rroxscaffold_36G00440210 Rroxscaffold_36G00440220 Rroxscaffold_36G00440230 Rroxscaffold_36G00440240 Rroxscaffold_36G00440250 Rroxscaffold_37G00445140 Rroxscaffold_37G00445200 Rroxscaffold_37G00445220 Rroxscaffold_38G00444460 Rroxscaffold_38G00444490 Rroxscaffold_38G00444510 Rroxscaffold_38G00444520 Rroxscaffold_38G00444540 Rroxscaffold_38G00444560 Rroxscaffold_38G00444580 Rroxscaffold_38G00444590 Rroxscaffold_38G00444630 Rroxscaffold_39G00448220 Rroxscaffold_40G00447660 Rroxscaffold_40G00447670 Rroxscaffold_41G00451100 Rroxscaffold_41G00451120 Rroxscaffold_42G00450440 Rroxscaffold_43G00449830 Rroxscaffold_43G00449880 Rroxscaffold_43G00449910 Rroxscaffold_43G00449950 Rroxscaffold_44G00440490 Rroxscaffold_44G00440530 Rroxscaffold_44G00440560 Rroxscaffold_44G00440570 Rroxscaffold_44G00440590 Rroxscaffold_44G00440630 Rroxscaffold_45G00438860 Rroxscaffold_45G00438910 Rroxscaffold_45G00438940 Rroxscaffold_45G00438990 Rroxscaffold_47G00443990 Rroxscaffold_47G00444010 Rroxscaffold_47G00444040 Rroxscaffold_47G00444050 Rroxscaffold_47G00444070 Rroxscaffold_47G00444080 Rroxscaffold_47G00444100 Rroxscaffold_48G00448440 Rroxscaffold_48G00448460 Rroxscaffold_48G00448480 Rroxscaffold_48G00448490 Rroxscaffold_48G00448530 Rroxscaffold_49G00438580 Rroxscaffold_49G00438610 Rroxscaffold_49G00438630 Rroxscaffold_49G00438640 Rroxscaffold_49G00438670 Rroxscaffold_49G00438690 Rroxscaffold_49G00438760 Rroxscaffold_49G00438770 Rroxscaffold_50G00444140 Rroxscaffold_50G00444150 Rroxscaffold_50G00444180 Rroxscaffold_50G00444220 Rroxscaffold_50G00444230 Rroxscaffold_50G00444270 Rroxscaffold_50G00444300 Rroxscaffold_50G00444310 Rroxscaffold_50G00444320 Rroxscaffold_50G00444340 Rroxscaffold_50G00444360 Rroxscaffold_51G00447830 Rroxscaffold_51G00447870 Rroxscaffold_51G00447890 Rroxscaffold_51G00447910 Rroxscaffold_52G00439320 Rroxscaffold_52G00439330 Rroxscaffold_52G00439340 Rroxscaffold_52G00439350 Rroxscaffold_52G00439370 Rroxscaffold_52G00439400 Rroxscaffold_53G00449660 Rroxscaffold_53G00449710 Rroxscaffold_53G00449720 Rroxscaffold_53G00449750 Rroxscaffold_53G00449760 Rroxscaffold_53G00449780 Rroxscaffold_54G00443480 Rroxscaffold_54G00443510 Rroxscaffold_54G00443520 Rroxscaffold_54G00443550 Rroxscaffold_54G00443570 Rroxscaffold_54G00443600 Rroxscaffold_54G00443640 Rroxscaffold_55G00450030 Rroxscaffold_55G00450040 Rroxscaffold_55G00450100 Rroxscaffold_57G00443080 Rroxscaffold_58G00449010 Rroxscaffold_58G00449060 Rroxscaffold_59G00442090 Rroxscaffold_59G00442140 Rroxscaffold_59G00442160 Rroxscaffold_59G00442190 Rroxscaffold_59G00442230 Rroxscaffold_60G00448300 Rroxscaffold_60G00448310 Rroxscaffold_60G00448350 Rroxscaffold_60G00448390 Rroxscaffold_61G00450000 Rroxscaffold_62G00437920 Rroxscaffold_62G00437970 Rroxscaffold_62G00437980 Rroxscaffold_62G00437990 Rroxscaffold_62G00438000 Rroxscaffold_62G00438010 Rroxscaffold_62G00438020 Rroxscaffold_64G00450660 Rroxscaffold_64G00450680 Rroxscaffold_64G00450720 Rroxscaffold_65G00445290 Rroxscaffold_65G00445310 Rroxscaffold_65G00445410 Rroxscaffold_66G00437580 Rroxscaffold_66G00437590 Rroxscaffold_66G00437810 Rroxscaffold_66G00437880 Rroxscaffold_67G00448120 Rroxscaffold_67G00448160 Rroxscaffold_68G00446970 Rroxscaffold_68G00447020 Rroxscaffold_68G00447050 Rroxscaffold_68G00447060 Rroxscaffold_69G00446660 Rroxscaffold_69G00446690 Rroxscaffold_69G00446700 Rroxscaffold_69G00446720 Rroxscaffold_69G00446750 Rroxscaffold_69G00446800 Rroxscaffold_6G00387780 Rroxscaffold_6G00387810 Rroxscaffold_70G00446280 Rroxscaffold_70G00446320 Rroxscaffold_70G00446360 Rroxscaffold_70G00446370 Rroxscaffold_70G00446400 Rroxscaffold_71G00445610 Rroxscaffold_71G00445620 Rroxscaffold_71G00445640 Rroxscaffold_71G00445660 Rroxscaffold_71G00445670 Rroxscaffold_71G00445700 Rroxscaffold_71G00445760 Rroxscaffold_71G00445780 Rroxscaffold_72G00449360 Rroxscaffold_72G00449390 Rroxscaffold_72G00449420 Rroxscaffold_72G00449440 Rroxscaffold_73G00439010 Rroxscaffold_73G00439020 Rroxscaffold_73G00439040 Rroxscaffold_73G00439050 Rroxscaffold_73G00439070 Rroxscaffold_73G00439080 Rroxscaffold_73G00439100 Rroxscaffold_73G00439130 Rroxscaffold_73G00439150 Rroxscaffold_73G00439170 Rroxscaffold_73G00439200 Rroxscaffold_73G00439220 Rroxscaffold_73G00439230 Rroxscaffold_73G00439240 Rroxscaffold_73G00439260 Rroxscaffold_73G00439280 Rroxscaffold_74G00442900 Rroxscaffold_74G00442910 Rroxscaffold_74G00442930 Rroxscaffold_75G00447270 Rroxscaffold_75G00447320 Rroxscaffold_75G00447360 Rroxscaffold_75G00447400 Rroxscaffold_76G00448550 Rroxscaffold_77G00449160 Rroxscaffold_78G00449590 Rroxscaffold_78G00449600 Rroxscaffold_78G00449620 Rroxscaffold_78G00449650 Rroxscaffold_79G00450220 Rroxscaffold_79G00450230 Rroxscaffold_79G00450240 Rroxscaffold_80G00450260 Rroxscaffold_80G00450270 Rroxscaffold_80G00450340 Rroxscaffold_81G00450500 Rroxscaffold_81G00450510 Rroxscaffold_83G00450970 Rroxscaffold_83G00450990 Rroxscaffold_85G00451220 Rroxscaffold_85G00451240 Rroxscaffold_86G00451280 Rroxscaffold_87G00451310 Rroxscaffold_88G00451400 Rroxscaffold_89G00451420 Rroxscaffold_90G00448780 Rroxscaffold_90G00448790 Rroxscaffold_90G00448840 Rroxscaffold_91G00442970 Rroxscaffold_91G00443010 Rroxscaffold_92G00446420 Rroxscaffold_92G00446450 Rroxscaffold_92G00446470 Rroxscaffold_92G00446480 Rroxscaffold_92G00446510 Rroxscaffold_93G00440840 Rroxscaffold_93G00440870 Rroxscaffold_93G00440900 Rroxscaffold_93G00440940 Rroxscaffold_93G00440960 Rroxscaffold_93G00440980 Rroxscaffold_93G00441000 Rroxscaffold_94G00445840 Rroxscaffold_94G00445860 Rroxscaffold_94G00445890 Rroxscaffold_94G00445930 Rroxscaffold_94G00445980 Rroxscaffold_94G00446010 Rroxscaffold_95G00449210 Rroxscaffold_95G00449250 Rroxscaffold_95G00449280 Rroxscaffold_96G00449100 Rroxscaffold_97G00442290 Rroxscaffold_97G00442300 Rroxscaffold_97G00442310 Rroxscaffold_97G00442320 Rroxscaffold_97G00442380 Rroxscaffold_97G00442410 Rroxscaffold_98G00451360 Rroxscaffold_98G00451370 Rroxscaffold_99G00451200
rosa_samantha Rh6CG279700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 814
AccB1I GGYRCC 3 cut(s) 4, 739, 990
AccI GTMKAC 1 cut(s) 981
AccII CGCG 3 cut(s) 240, 745, 1077
AciI CCGC 8 cut(s) 35, 238, 505, 529, 666, 678, 743, 1077
AclWI GGATC 1 cut(s) 714
AcsI RAATTY 1 cut(s) 1044
AcyI GRCGYC 5 cut(s) 5, 71, 81, 318, 811
AfaI GTAC 2 cut(s) 584, 779
AfiI CCNNNNNNNGG 5 cut(s) 15, 16, 17, 888, 918
AflIII ACRYGT 3 cut(s) 311, 695, 780
AgsI TTSAA 7 cut(s) 371, 488, 550, 692, 803, 1033, 1087
AjiI CACGTC 3 cut(s) 312, 332, 1065
AjnI CCWGG 5 cut(s) 14, 322, 587, 712, 873
AleI CACNNNNGTG 2 cut(s) 573, 1063
AluBI AGCT 1 cut(s) 96
AluI AGCT 1 cut(s) 96
Alw21I GWGCWC 3 cut(s) 252, 769, 896
Alw26I GTCTC 3 cut(s) 523, 746, 851
Alw44I GTGCAC 1 cut(s) 892
AlwI GGATC 1 cut(s) 714
Ama87I CYCGRG 3 cut(s) 285, 520, 702
AoxI GGCC 2 cut(s) 259, 340
ApaLI GTGCAC 1 cut(s) 892
ApoI RAATTY 1 cut(s) 1044
Asp700I GAANNNNTTC 1 cut(s) 1028
AspA2I CCTAGG 1 cut(s) 644
AspLEI GCGC 7 cut(s) 7, 162, 359, 563, 608, 660, 1077
AspS9I GGNCC 2 cut(s) 32, 260
AsuC2I CCSGG 2 cut(s) 30, 108
AsuHPI GGTGA 1 cut(s) 505
AvaI CYCGRG 3 cut(s) 285, 520, 702
AvaII GGWCC 1 cut(s) 32
AvrII CCTAGG 1 cut(s) 644
BaeGI GKGCMC 3 cut(s) 337, 896, 926
BanI GGYRCC 3 cut(s) 4, 739, 990
BauI CACGAG 1 cut(s) 155
BbsI GAAGAC 1 cut(s) 495
Bbv12I GWGCWC 3 cut(s) 252, 769, 896
BccI CCATC 3 cut(s) 271, 283, 374
BceAI ACGGC 2 cut(s) 104, 542
BcgI CGANNNNNNTGC 2 cut(s) 756, 790
BciT130I CCWGG 5 cut(s) 16, 324, 589, 714, 875
BciVI GTATCC 1 cut(s) 862
BcnI CCSGG 2 cut(s) 30, 108
BcoDI GTCTC 3 cut(s) 523, 746, 851
BfaI CTAG 2 cut(s) 645, 786
BfoI RGCGCY 1 cut(s) 8
BfuI GTATCC 1 cut(s) 862
BisI GCNGC 1 cut(s) 666
BlnI CCTAGG 1 cut(s) 644
BlsI GCNGC 1 cut(s) 667
Bme1390I CCNGG 7 cut(s) 16, 30, 108, 324, 589, 714, 875
Bme18I GGWCC 1 cut(s) 32
BmeT110I CYCGRG 3 cut(s) 285, 520, 702
BmgBI CACGTC 3 cut(s) 312, 332, 1065
BmgT120I GGNCC 2 cut(s) 32, 260
BmiI GGNNCC 4 cut(s) 6, 741, 880, 992
BmrFI CCNGG 7 cut(s) 16, 30, 108, 324, 589, 714, 875
BmsI GCATC 3 cut(s) 431, 1042, 1064
BpiI GAAGAC 1 cut(s) 495
BpmI CTGGAG 1 cut(s) 38
Bpu10I CCTNAGC 1 cut(s) 963
BpuEI CTTGAG 1 cut(s) 76
BpuMI CCSGG 2 cut(s) 30, 108
Bsa29I ATCGAT 1 cut(s) 439
BsaHI GRCGYC 5 cut(s) 5, 71, 81, 318, 811
BsaI GGTCTC 1 cut(s) 746
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 16, 17, 888, 918
Bse118I RCCGGY 1 cut(s) 572
BseBI CCWGG 5 cut(s) 16, 324, 589, 714, 875
BseCI ATCGAT 1 cut(s) 439
BseGI GGATG 2 cut(s) 266, 275
BseLI CCNNNNNNNGG 5 cut(s) 15, 16, 17, 888, 918
BseMII CTCAG 3 cut(s) 32, 237, 977
BseSI GKGCMC 3 cut(s) 337, 896, 926
BseYI CCCAGC 2 cut(s) 96, 683
Bsh1236I CGCG 3 cut(s) 240, 745, 1077
BshFI GGCC 2 cut(s) 261, 342
BshNI GGYRCC 3 cut(s) 4, 739, 990
BshVI ATCGAT 1 cut(s) 439
BsiHKAI GWGCWC 3 cut(s) 252, 769, 896
BsiHKCI CYCGRG 3 cut(s) 285, 520, 702
BsiSI CCGG 3 cut(s) 30, 108, 573
BslFI GGGAC 3 cut(s) 33, 257, 537
BslI CCNNNNNNNGG 5 cut(s) 15, 16, 17, 888, 918
BsmAI GTCTC 3 cut(s) 523, 746, 851
BsmBI CGTCTC 1 cut(s) 523
BsmFI GGGAC 3 cut(s) 33, 257, 537
BsmI GAATGC 1 cut(s) 720
BsnI GGCC 2 cut(s) 261, 342
Bso31I GGTCTC 1 cut(s) 746
BsoBI CYCGRG 3 cut(s) 285, 520, 702
Bsp1286I GDGCHC 5 cut(s) 252, 337, 769, 896, 926
Bsp143I GATC 4 cut(s) 148, 510, 599, 706
BspACI CCGC 8 cut(s) 35, 238, 505, 529, 666, 678, 743, 1077
BspANI GGCC 2 cut(s) 261, 342
BspCNI CTCAG 3 cut(s) 33, 238, 976
BspDI ATCGAT 1 cut(s) 439
BspFNI CGCG 3 cut(s) 240, 745, 1077
BspLI GGNNCC 4 cut(s) 6, 741, 880, 992
BspPI GGATC 1 cut(s) 714
BspT107I GGYRCC 3 cut(s) 4, 739, 990
BspTNI GGTCTC 1 cut(s) 746
BsrFI RCCGGY 1 cut(s) 572
BssAI RCCGGY 1 cut(s) 572
BssMI GATC 4 cut(s) 148, 510, 599, 706
BssNI GRCGYC 5 cut(s) 5, 71, 81, 318, 811
BssSI CACGAG 1 cut(s) 155
BssT1I CCWWGG 2 cut(s) 556, 644
Bst2BI CACGAG 1 cut(s) 155
Bst2UI CCWGG 5 cut(s) 16, 324, 589, 714, 875
Bst4CI ACNGT 3 cut(s) 517, 883, 1083
BstACI GRCGYC 5 cut(s) 5, 71, 81, 318, 811
BstC8I GCNNGC 5 cut(s) 117, 610, 738, 909, 1073
BstDEI CTNAG 4 cut(s) 41, 126, 246, 963
BstF5I GGATG 2 cut(s) 266, 275
BstFNI CGCG 3 cut(s) 240, 745, 1077
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 7 cut(s) 7, 162, 359, 563, 608, 660, 1077
BstKTI GATC 4 cut(s) 151, 513, 602, 709
BstMAI GTCTC 3 cut(s) 523, 746, 851
BstMBI GATC 4 cut(s) 148, 510, 599, 706
BstMWI GCNNNNNNNGC 5 cut(s) 210, 356, 363, 569, 742
BstNI CCWGG 5 cut(s) 16, 324, 589, 714, 875
BstNSI RCATGY 4 cut(s) 699, 784, 911, 1075
BstSCI CCNGG 7 cut(s) 14, 28, 106, 322, 587, 712, 873
BstSLI GKGCMC 3 cut(s) 337, 896, 926
BstUI CGCG 3 cut(s) 240, 745, 1077
BstV2I GAAGAC 1 cut(s) 495
Bsu15I ATCGAT 1 cut(s) 439
BsuI GTATCC 1 cut(s) 862
BsuRI GGCC 2 cut(s) 261, 342
BsuTUI ATCGAT 1 cut(s) 439
BtrI CACGTC 3 cut(s) 312, 332, 1065
BtsCI GGATG 2 cut(s) 266, 275
BtsIMutI CAGTG 1 cut(s) 1058
Cac8I GCNNGC 5 cut(s) 117, 610, 738, 909, 1073
CfoI GCGC 7 cut(s) 7, 162, 359, 563, 608, 660, 1077
Cfr10I RCCGGY 1 cut(s) 572
Cfr13I GGNCC 2 cut(s) 32, 260
ClaI ATCGAT 1 cut(s) 439
CpoI CGGWCCG 1 cut(s) 32
CseI GACGC 4 cut(s) 55, 79, 89, 326
CsiI ACCWGGT 1 cut(s) 712
Csp6I GTAC 2 cut(s) 583, 778
CspI CGGWCCG 1 cut(s) 32
CviAII CATG 4 cut(s) 696, 781, 908, 1072
CviJI RGCY 9 cut(s) 96, 101, 261, 342, 350, 450, 665, 835, 962
CviKI_1 RGCY 9 cut(s) 96, 101, 261, 342, 350, 450, 665, 835, 962
CviQI GTAC 2 cut(s) 583, 778
DdeI CTNAG 4 cut(s) 41, 126, 246, 963
DinI GGCGCC 1 cut(s) 6
DpnI GATC 4 cut(s) 150, 512, 601, 708
DpnII GATC 4 cut(s) 148, 510, 599, 706
EciI GGCGGA 2 cut(s) 24, 667
Eco130I CCWWGG 2 cut(s) 556, 644
Eco31I GGTCTC 1 cut(s) 746
Eco32I GATATC 1 cut(s) 457
Eco47I GGWCC 1 cut(s) 32
Eco88I CYCGRG 3 cut(s) 285, 520, 702
EcoRII CCWGG 5 cut(s) 14, 322, 587, 712, 873
EcoRV GATATC 1 cut(s) 457
EcoT14I CCWWGG 2 cut(s) 556, 644
EcoT22I ATGCAT 1 cut(s) 1057
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 556, 644
Esp3I CGTCTC 1 cut(s) 523
FaeI CATG 4 cut(s) 699, 784, 911, 1075
FaiI YATR 6 cut(s) 231, 483, 697, 782, 909, 1073
FalI AAGNNNNNCTT 2 cut(s) 1032, 1064
FaqI GGGAC 3 cut(s) 33, 257, 537
FatI CATG 4 cut(s) 695, 780, 907, 1071
FauI CCCGC 2 cut(s) 512, 522
FblI GTMKAC 1 cut(s) 981
Fnu4HI GCNGC 1 cut(s) 666
FokI GGATG 2 cut(s) 253, 262
Fsp4HI GCNGC 1 cut(s) 666
FspBI CTAG 2 cut(s) 645, 786
GlaI GCGC 7 cut(s) 6, 161, 358, 562, 607, 659, 1076
GluI GCNGC 1 cut(s) 666
GsaI CCCAGC 2 cut(s) 100, 687
GsuI CTGGAG 1 cut(s) 38
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 2 cut(s) 261, 342
HapII CCGG 3 cut(s) 30, 108, 573
HgaI GACGC 4 cut(s) 55, 79, 89, 326
HhaI GCGC 7 cut(s) 7, 162, 359, 563, 608, 660, 1077
Hin1I GRCGYC 5 cut(s) 5, 71, 81, 318, 811
Hin1II CATG 4 cut(s) 699, 784, 911, 1075
Hin6I GCGC 7 cut(s) 5, 160, 357, 561, 606, 658, 1075
HinP1I GCGC 7 cut(s) 5, 160, 357, 561, 606, 658, 1075
HincII GTYRAC 1 cut(s) 982
HindII GTYRAC 1 cut(s) 982
HinfI GANTC 6 cut(s) 87, 132, 375, 392, 470, 1024
HpaII CCGG 3 cut(s) 30, 108, 573
HphI GGTGA 1 cut(s) 505
Hpy166II GTNNAC 3 cut(s) 386, 894, 982
Hpy188I TCNGA 3 cut(s) 42, 69, 856
Hpy188III TCNNGA 5 cut(s) 55, 285, 522, 704, 1049
Hpy8I GTNNAC 3 cut(s) 386, 894, 982
Hpy99I CGWCG 4 cut(s) 83, 313, 497, 887
HpyAV CCTTC 3 cut(s) 21, 955, 964
HpyCH4III ACNGT 3 cut(s) 517, 883, 1083
HpyCH4IV ACGT 5 cut(s) 311, 331, 429, 811, 1064
HpyCH4V TGCA 7 cut(s) 400, 622, 760, 822, 894, 917, 1055
HpyF10VI GCNNNNNNNGC 5 cut(s) 210, 356, 363, 569, 742
HpyF3I CTNAG 4 cut(s) 41, 126, 246, 963
HpySE526I ACGT 5 cut(s) 311, 331, 429, 811, 1064
Hsp92I GRCGYC 5 cut(s) 5, 71, 81, 318, 811
Hsp92II CATG 4 cut(s) 699, 784, 911, 1075
HspAI GCGC 7 cut(s) 5, 160, 357, 561, 606, 658, 1075
KasI GGCGCC 1 cut(s) 4
Kzo9I GATC 4 cut(s) 148, 510, 599, 706
LmnI GCTCC 1 cut(s) 1068
LweI GCATC 3 cut(s) 431, 1042, 1064
MabI ACCWGGT 1 cut(s) 712
MaeI CTAG 2 cut(s) 645, 786
MaeII ACGT 5 cut(s) 311, 331, 429, 811, 1064
MaeIII GTNAC 3 cut(s) 121, 241, 314
MalI GATC 4 cut(s) 150, 512, 601, 708
MboI GATC 4 cut(s) 148, 510, 599, 706
MboII GAAGA 2 cut(s) 425, 500
MhlI GDGCHC 5 cut(s) 252, 337, 769, 896, 926
MluCI AATT 5 cut(s) 63, 401, 564, 804, 1044
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 2 cut(s) 369, 479
MmeI TCCRAC 1 cut(s) 303
Mph1103I ATGCAT 1 cut(s) 1057
MroXI GAANNNNTTC 1 cut(s) 1028
MseI TTAA 1 cut(s) 138
MslI CAYNNNNRTG 4 cut(s) 573, 617, 912, 1063
MspI CCGG 3 cut(s) 30, 108, 573
MspR9I CCNGG 7 cut(s) 16, 30, 108, 324, 589, 714, 875
Mva1269I GAATGC 1 cut(s) 720
MvaI CCWGG 5 cut(s) 16, 324, 589, 714, 875
MvnI CGCG 3 cut(s) 240, 745, 1077
MwoI GCNNNNNNNGC 5 cut(s) 210, 356, 363, 569, 742
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 2 cut(s) 30, 108
NdeII GATC 4 cut(s) 148, 510, 599, 706
NlaIII CATG 4 cut(s) 699, 784, 911, 1075
NlaIV GGNNCC 4 cut(s) 6, 741, 880, 992
NmeAIII GCCGAG 4 cut(s) 239, 318, 476, 491
NmuCI GTSAC 2 cut(s) 241, 314
NsiI ATGCAT 1 cut(s) 1057
NspI RCATGY 4 cut(s) 699, 784, 911, 1075
OliI CACNNNNGTG 2 cut(s) 573, 1063
PaeI GCATGC 2 cut(s) 911, 1075
PciI ACATGT 2 cut(s) 695, 780
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PctI GAATGC 1 cut(s) 720
PdmI GAANNNNTTC 1 cut(s) 1028
PfeI GAWTC 4 cut(s) 87, 132, 392, 1024
PkrI GCNGC 1 cut(s) 667
PleI GAGTC 2 cut(s) 369, 478
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 2 cut(s) 369, 478
PscI ACATGT 2 cut(s) 695, 780
Psp6I CCWGG 5 cut(s) 14, 322, 587, 712, 873
PspFI CCCAGC 2 cut(s) 96, 683
PspGI CCWGG 5 cut(s) 14, 322, 587, 712, 873
PspN4I GGNNCC 4 cut(s) 6, 741, 880, 992
PspPI GGNCC 2 cut(s) 32, 260
RsaI GTAC 2 cut(s) 584, 779
RsaNI GTAC 2 cut(s) 583, 778
RseI CAYNNNNRTG 4 cut(s) 573, 617, 912, 1063
Rsr2I CGGWCCG 1 cut(s) 32
RsrII CGGWCCG 1 cut(s) 32
SalI GTCGAC 1 cut(s) 980
SaqAI TTAA 1 cut(s) 138
SatI GCNGC 1 cut(s) 666
Sau3AI GATC 4 cut(s) 148, 510, 599, 706
Sau96I GGNCC 2 cut(s) 32, 260
SchI GAGTC 2 cut(s) 369, 479
ScrFI CCNGG 7 cut(s) 16, 30, 108, 324, 589, 714, 875
SduI GDGCHC 5 cut(s) 252, 337, 769, 896, 926
SexAI ACCWGGT 1 cut(s) 712
SfaNI GCATC 3 cut(s) 431, 1042, 1064
SfoI GGCGCC 1 cut(s) 6
SgrAI CRCCGGYG 1 cut(s) 572
SinI GGWCC 1 cut(s) 32
SmiMI CAYNNNNRTG 4 cut(s) 573, 617, 912, 1063
SmlI CTYRAG 1 cut(s) 91
SmoI CTYRAG 1 cut(s) 91
SphI GCATGC 2 cut(s) 911, 1075
Sse9I AATT 5 cut(s) 63, 401, 564, 804, 1044
SsiI CCGC 8 cut(s) 35, 238, 505, 529, 666, 678, 743, 1077
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 2 cut(s) 645, 786
StyD4I CCNGG 7 cut(s) 14, 28, 106, 322, 587, 712, 873
StyI CCWWGG 2 cut(s) 556, 644
TaaI ACNGT 3 cut(s) 517, 883, 1083
TaiI ACGT 5 cut(s) 314, 334, 432, 814, 1067
TaqI TCGA 5 cut(s) 147, 378, 439, 598, 981
TasI AATT 5 cut(s) 63, 401, 564, 804, 1044
TauI GCSGC 1 cut(s) 668
TfiI GAWTC 4 cut(s) 87, 132, 392, 1024
Tru1I TTAA 1 cut(s) 138
Tru9I TTAA 1 cut(s) 138
TscAI CASTG 1 cut(s) 1065
TseFI GTSAC 2 cut(s) 241, 314
Tsp45I GTSAC 2 cut(s) 241, 314
TspDTI ATGAA 2 cut(s) 425, 534
TspGWI ACGGA 2 cut(s) 259, 449
TspRI CASTG 1 cut(s) 1065
VneI GTGCAC 1 cut(s) 892
VpaK11BI GGWCC 1 cut(s) 32
XapI RAATTY 1 cut(s) 1044
XceI RCATGY 4 cut(s) 699, 784, 911, 1075
XmaJI CCTAGG 1 cut(s) 644
XmiI GTMKAC 1 cut(s) 981
XmnI GAANNNNTTC 1 cut(s) 1028
XspI CTAG 2 cut(s) 645, 786
ZraI GACGTC 1 cut(s) 812
Zsp2I ATGCAT 1 cut(s) 1057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.