RLG00000007952

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
23347569 .. 23351656
4088 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007952

Sequence Viewer

Length: 453 bp
ATGGACAATGAGTCGTCGGAGAAGGTCGCCAACCTCAAGTCATTGAACTCTCTGCTCCTGAAGGAGACCCACAATCGGAGGCAGCAGGTGGAGGCTTTGGTCAAGGCCAAGAAGGGTTTGGAATCTGAGCTGAGAGAAGATGGTGGAGGCCGCGTCGGAGAAGTTCGTGGTGGTCGCCGACGAGACGAAACTGGTGACGAGGCTGGGAGGAAGCGGGCTGGCAATGGGTTGTTCTTGAATATGGCGACCACGGTGATTGGCTTTTTTTGTGATTTTGGTGGTGGTGATGGTGGTGTGGAGGTGAGTGTTGGAACCTCTGATTTGTACTTGTTATGTGTTGTGAAAAATGTTTATTGGTGTATTGTTAGAATGGTAAAATGGATAATTGAAAGAGGTTTGGAGGTTGGAGAGAGTGGAATCGGAGATGGGAGGTGGGTGCAGATGGAGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

151

Amino Acids

16.49

Weight (kDa)

5.62

Isoelectric Point (pI)

40.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 76
Acc36I ACCTGC 1 cut(s) 76
AccII CGCG 1 cut(s) 153
AciI CCGC 2 cut(s) 151, 214
AcuI CTGAAG 1 cut(s) 80
AfaI GTAC 1 cut(s) 326
AfiI CCNNNNNNNGG 1 cut(s) 75
AgsI TTSAA 3 cut(s) 46, 238, 389
AhdI GACNNNNNGTC 1 cut(s) 10
AluBI AGCT 1 cut(s) 130
AluI AGCT 1 cut(s) 130
Alw26I GTCTC 2 cut(s) 59, 177
AoxI GGCC 2 cut(s) 105, 148
ApeKI GCWGC 1 cut(s) 82
AsuHPI GGTGA 4 cut(s) 206, 265, 296, 313
BbvI GCAGC 1 cut(s) 94
BccI CCATC 4 cut(s) 134, 281, 419, 436
BcoDI GTCTC 2 cut(s) 59, 177
BfuAI ACCTGC 1 cut(s) 76
BisI GCNGC 2 cut(s) 83, 151
BlsI GCNGC 2 cut(s) 84, 152
BmeRI GACNNNNNGTC 1 cut(s) 10
BmiI GGNNCC 1 cut(s) 313
BpuEI CTTGAG 1 cut(s) 20
BsaI GGTCTC 1 cut(s) 59
BsaJI CCNNGG 1 cut(s) 249
BsaXI ACNNNNNCTCC 2 cut(s) 138, 168
Bsc4I CCNNNNNNNGG 1 cut(s) 75
Bse1I ACTGG 1 cut(s) 196
Bse3DI GCAATG 1 cut(s) 229
BseDI CCNNGG 1 cut(s) 249
BseLI CCNNNNNNNGG 1 cut(s) 75
BseMI GCAATG 1 cut(s) 229
BseMII CTCAG 2 cut(s) 117, 122
BseNI ACTGG 1 cut(s) 196
BseXI GCAGC 1 cut(s) 94
BseYI CCCAGC 1 cut(s) 203
Bsh1236I CGCG 1 cut(s) 153
BshFI GGCC 2 cut(s) 107, 150
BslI CCNNNNNNNGG 1 cut(s) 75
BsmAI GTCTC 2 cut(s) 59, 177
BsmBI CGTCTC 1 cut(s) 177
BsnI GGCC 2 cut(s) 107, 150
Bso31I GGTCTC 1 cut(s) 59
BspACI CCGC 2 cut(s) 151, 214
BspANI GGCC 2 cut(s) 107, 150
BspCNI CTCAG 2 cut(s) 118, 123
BspFNI CGCG 1 cut(s) 153
BspLI GGNNCC 1 cut(s) 313
BspMI ACCTGC 1 cut(s) 76
BspTNI GGTCTC 1 cut(s) 59
BsrDI GCAATG 1 cut(s) 229
BsrI ACTGG 1 cut(s) 196
BssECI CCNNGG 1 cut(s) 249
Bst4CI ACNGT 1 cut(s) 253
BstC8I GCNNGC 2 cut(s) 216, 220
BstDEI CTNAG 2 cut(s) 126, 131
BstDSI CCRYGG 1 cut(s) 249
BstFNI CGCG 1 cut(s) 153
BstMAI GTCTC 2 cut(s) 59, 177
BstUI CGCG 1 cut(s) 153
BstV1I GCAGC 1 cut(s) 94
BsuRI GGCC 2 cut(s) 107, 150
BtgI CCRYGG 1 cut(s) 249
BveI ACCTGC 1 cut(s) 76
Cac8I GCNNGC 2 cut(s) 216, 220
CseI GACGC 1 cut(s) 142
Csp6I GTAC 1 cut(s) 325
CspCI CAANNNNNGTGG 2 cut(s) 238, 273
CviJI RGCY 7 cut(s) 95, 107, 130, 150, 203, 218, 261
CviKI_1 RGCY 7 cut(s) 95, 107, 130, 150, 203, 218, 261
CviQI GTAC 1 cut(s) 325
DdeI CTNAG 2 cut(s) 126, 131
DriI GACNNNNNGTC 1 cut(s) 10
Eam1105I GACNNNNNGTC 1 cut(s) 10
Eco31I GGTCTC 1 cut(s) 59
Eco57I CTGAAG 1 cut(s) 80
Esp3I CGTCTC 1 cut(s) 177
FaiI YATR 2 cut(s) 242, 334
FauI CCCGC 1 cut(s) 207
Fnu4HI GCNGC 2 cut(s) 83, 151
Fsp4HI GCNGC 2 cut(s) 83, 151
GluI GCNGC 2 cut(s) 83, 151
GsaI CCCAGC 1 cut(s) 207
HaeIII GGCC 2 cut(s) 107, 150
HgaI GACGC 1 cut(s) 142
HinfI GANTC 3 cut(s) 11, 122, 417
HphI GGTGA 4 cut(s) 206, 265, 296, 313
Hpy188I TCNGA 6 cut(s) 19, 78, 127, 158, 319, 422
Hpy188III TCNNGA 2 cut(s) 58, 235
Hpy99I CGWCG 3 cut(s) 19, 158, 183
HpyAV CCTTC 3 cut(s) 16, 55, 106
HpyCH4III ACNGT 1 cut(s) 253
HpyCH4V TGCA 1 cut(s) 439
HpyF3I CTNAG 2 cut(s) 126, 131
LmnI GCTCC 1 cut(s) 60
LpnPI CCDG 5 cut(s) 71, 71, 177, 189, 204
Lsp1109I GCAGC 1 cut(s) 94
MaeIII GTNAC 1 cut(s) 194
MboII GAAGA 1 cut(s) 149
MluCI AATT 1 cut(s) 384
MlyI GAGTC 1 cut(s) 20
MmeI TCCRAC 3 cut(s) 136, 289, 385
MvnI CGCG 1 cut(s) 153
NlaIV GGNNCC 1 cut(s) 313
NmuCI GTSAC 1 cut(s) 194
PaqCI CACCTGC 1 cut(s) 76
PfeI GAWTC 2 cut(s) 122, 417
PkrI GCNGC 2 cut(s) 84, 152
PleI GAGTC 1 cut(s) 19
PpsI GAGTC 1 cut(s) 19
PspFI CCCAGC 1 cut(s) 203
PspN4I GGNNCC 1 cut(s) 313
RsaI GTAC 1 cut(s) 326
RsaNI GTAC 1 cut(s) 325
SatI GCNGC 2 cut(s) 83, 151
SchI GAGTC 1 cut(s) 20
SetI ASST 9 cut(s) 27, 36, 90, 132, 303, 317, 397, 405, 434
SmlI CTYRAG 1 cut(s) 35
SmoI CTYRAG 1 cut(s) 35
Sse9I AATT 1 cut(s) 384
SsiI CCGC 2 cut(s) 151, 214
TaaI ACNGT 1 cut(s) 253
TasI AATT 1 cut(s) 384
TatI WGTACW 1 cut(s) 324
TauI GCSGC 1 cut(s) 153
TfiI GAWTC 2 cut(s) 122, 417
TseFI GTSAC 1 cut(s) 194
TseI GCWGC 1 cut(s) 82
Tsp45I GTSAC 1 cut(s) 194
XcmI CCANNNNNNNNNTGG 1 cut(s) 115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.