No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1221000.v1.1 |
| prunus_persica | Prupe.1G119300_v2.0.a1 Prupe.1G119300_v2.0.a1 |
| pyrus_communis | pycom06g16260 |
| rosa_chinensis | RchiOBHm_Chr2g0109271 RchiOBHm_Chr3g0449971 RchiOBHm_Chr5g0055151 RchiOBHm_Chr7g0225831 |
| rosa_laevigata | RLG00000013375 RLG00000014560 RLG00000019363 RLG00000034972 RLG00000036177 |
| rosa_multiflora | Rmu_sc0000820.1_g000009 Rmu_sc0010632.1_g000015 Rmu_sc0021708.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00326060 |
| rosa_rugosa | Rorug04G0011200 Rorug05G0291600 Rorug06G0106800 Rorug06G0229800 |
| rosa_samantha | Rh1AG168800 Rh1BG015000 Rh1CG156200 Rh2BG108000 Rh2BG192200 Rh2CG109800 Rh2DG571800 Rh3AG023500 Rh3CG317800 Rh3DG024000 Rh4AG069700 Rh4AG336500 Rh4CG032300 Rh4DG120200 Rh4DG339000 Rh5CG394600 Rh5DG417000 Rh5DG465600 Rh6BG052200 Rh6CG121900 Rh6DG342900 Rh6DG343000 Rh7AG365200 Rh7CG384100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 295, 298 |
| AgsI | TTSAA | 2 cut(s) | 121, 137 |
| AleI | CACNNNNGTG | 1 cut(s) | 59 |
| AluBI | AGCT | 3 cut(s) | 12, 124, 147 |
| AluI | AGCT | 3 cut(s) | 12, 124, 147 |
| Alw26I | GTCTC | 2 cut(s) | 40, 296 |
| AoxI | GGCC | 1 cut(s) | 18 |
| AsuHPI | GGTGA | 1 cut(s) | 261 |
| AsuII | TTCGAA | 2 cut(s) | 142, 286 |
| BccI | CCATC | 1 cut(s) | 280 |
| BceAI | ACGGC | 1 cut(s) | 243 |
| BcoDI | GTCTC | 2 cut(s) | 40, 296 |
| BfaI | CTAG | 1 cut(s) | 310 |
| BisI | GCNGC | 1 cut(s) | 298 |
| BlsI | GCNGC | 1 cut(s) | 299 |
| BmiI | GGNNCC | 2 cut(s) | 174, 257 |
| Bpu14I | TTCGAA | 2 cut(s) | 142, 286 |
| BsaWI | WCCGGW | 1 cut(s) | 83 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 99, 129, 247, 277 |
| BseRI | GAGGAG | 1 cut(s) | 233 |
| BshFI | GGCC | 1 cut(s) | 20 |
| BsiSI | CCGG | 1 cut(s) | 84 |
| BsmAI | GTCTC | 2 cut(s) | 40, 296 |
| BsnI | GGCC | 1 cut(s) | 20 |
| Bsp119I | TTCGAA | 2 cut(s) | 142, 286 |
| Bsp143I | GATC | 2 cut(s) | 66, 250 |
| BspACI | CCGC | 2 cut(s) | 295, 298 |
| BspANI | GGCC | 1 cut(s) | 20 |
| BspLI | GGNNCC | 2 cut(s) | 174, 257 |
| BspT104I | TTCGAA | 2 cut(s) | 142, 286 |
| BssMI | GATC | 2 cut(s) | 66, 250 |
| BstBI | TTCGAA | 2 cut(s) | 142, 286 |
| BstKTI | GATC | 2 cut(s) | 69, 253 |
| BstMAI | GTCTC | 2 cut(s) | 40, 296 |
| BstMBI | GATC | 2 cut(s) | 66, 250 |
| BsuRI | GGCC | 1 cut(s) | 20 |
| CviAII | CATG | 2 cut(s) | 16, 153 |
| CviJI | RGCY | 5 cut(s) | 12, 20, 124, 147, 258 |
| CviKI_1 | RGCY | 5 cut(s) | 12, 20, 124, 147, 258 |
| DpnI | GATC | 2 cut(s) | 68, 252 |
| DpnII | GATC | 2 cut(s) | 66, 250 |
| EciI | GGCGGA | 1 cut(s) | 284 |
| FaeI | CATG | 2 cut(s) | 19, 156 |
| FaiI | YATR | 2 cut(s) | 17, 154 |
| FatI | CATG | 2 cut(s) | 15, 152 |
| Fnu4HI | GCNGC | 1 cut(s) | 298 |
| Fsp4HI | GCNGC | 1 cut(s) | 298 |
| FspBI | CTAG | 1 cut(s) | 310 |
| GluI | GCNGC | 1 cut(s) | 298 |
| HaeIII | GGCC | 1 cut(s) | 20 |
| HapII | CCGG | 1 cut(s) | 84 |
| Hin1II | CATG | 2 cut(s) | 19, 156 |
| HindIII | AAGCTT | 2 cut(s) | 122, 145 |
| HinfI | GANTC | 1 cut(s) | 33 |
| HpaII | CCGG | 1 cut(s) | 84 |
| HphI | GGTGA | 1 cut(s) | 261 |
| Hpy166II | GTNNAC | 1 cut(s) | 27 |
| Hpy188I | TCNGA | 2 cut(s) | 107, 255 |
| Hpy188III | TCNNGA | 1 cut(s) | 176 |
| Hpy8I | GTNNAC | 1 cut(s) | 27 |
| Hpy99I | CGWCG | 1 cut(s) | 101 |
| HpyAV | CCTTC | 2 cut(s) | 124, 276 |
| HpyCH4V | TGCA | 2 cut(s) | 44, 89 |
| Hsp92II | CATG | 2 cut(s) | 19, 156 |
| Kzo9I | GATC | 2 cut(s) | 66, 250 |
| LmnI | GCTCC | 2 cut(s) | 163, 255 |
| LpnPI | CCDG | 3 cut(s) | 43, 97, 189 |
| MaeI | CTAG | 1 cut(s) | 310 |
| MaeIII | GTNAC | 1 cut(s) | 193 |
| MalI | GATC | 2 cut(s) | 68, 252 |
| MboI | GATC | 2 cut(s) | 66, 250 |
| MboII | GAAGA | 1 cut(s) | 267 |
| MlyI | GAGTC | 1 cut(s) | 42 |
| MmeI | TCCRAC | 1 cut(s) | 85 |
| MnlI | CCTC | 2 cut(s) | 104, 211 |
| MslI | CAYNNNNRTG | 1 cut(s) | 59 |
| MspI | CCGG | 1 cut(s) | 84 |
| NdeII | GATC | 2 cut(s) | 66, 250 |
| NlaIII | CATG | 2 cut(s) | 19, 156 |
| NlaIV | GGNNCC | 2 cut(s) | 174, 257 |
| NmuCI | GTSAC | 1 cut(s) | 193 |
| NspV | TTCGAA | 2 cut(s) | 142, 286 |
| OliI | CACNNNNGTG | 1 cut(s) | 59 |
| PkrI | GCNGC | 1 cut(s) | 299 |
| PleI | GAGTC | 1 cut(s) | 41 |
| PpsI | GAGTC | 1 cut(s) | 41 |
| PspN4I | GGNNCC | 2 cut(s) | 174, 257 |
| RseI | CAYNNNNRTG | 1 cut(s) | 59 |
| SatI | GCNGC | 1 cut(s) | 298 |
| Sau3AI | GATC | 2 cut(s) | 66, 250 |
| SchI | GAGTC | 1 cut(s) | 42 |
| SetI | ASST | 5 cut(s) | 14, 96, 126, 135, 149 |
| SfuI | TTCGAA | 2 cut(s) | 142, 286 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 59 |
| SsiI | CCGC | 2 cut(s) | 295, 298 |
| SspMI | CTAG | 1 cut(s) | 310 |
| TaqI | TCGA | 4 cut(s) | 99, 142, 213, 286 |
| TauI | GCSGC | 1 cut(s) | 300 |
| TseFI | GTSAC | 1 cut(s) | 193 |
| Tsp45I | GTSAC | 1 cut(s) | 193 |
| TspDTI | ATGAA | 2 cut(s) | 4, 267 |
| TspGWI | ACGGA | 1 cut(s) | 28 |
| XspI | CTAG | 1 cut(s) | 310 |