RLG00000019363

Protein of unknown function (DUF632)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
50871566 .. 50875063
3498 bp
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UTR
Exon/CDS
Intron
RLM00000019363

Sequence Viewer

Length: 504 bp
ATGATGAACAAGCTCCAGAATTTGGTCACGTACCCCAAAATCAGCGAAGATTTCTACAACCGTACCCTCTCCGGCAGCGTCATCACTTTCGCCTCCTCCATCGTTATGCTCCTACTCTTCTCCGAGGTCAGTGGTGGTATCCCTACTTTGGCAGAGATATATCAATTGTTATCTGGGAAGGTGTTCTTAGAAGCTGCCAACTACCAACTGAAAAAAGATTTTGTTAGAGAGGCTATTGAGAGAGGGACAAAAGGCACAAGTGCTGAATCAATATCACAAATGATTGGAAAACTGAGAGATGAAGAGCTGCGGCCACAACTTATAGAGCTGCTAAAGGGAGTGAGATCACTTAACCGCCCCACCATTGGAATGGTCTGCAATGACTCGCACCAGCTTGCTACTTTCAAGCTTGAAGCCGAACTTCAAAATTGGCATGCTTGCTTTGCATCATACTTTTCTTCCCAGAAAGCGTACAGTGATAGGGCAGTGAACTTGTATGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

168

Amino Acids

18.76

Weight (kDa)

7.74

Isoelectric Point (pI)

38.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF632 PF04782 87 - 115 3.7e-06 Protein of unknown function (DUF632)
DUF632 PF04782 114 - 158 6.4e-08 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 22
AciI CCGC 2 cut(s) 310, 355
AcoI YGGCCR 1 cut(s) 311
AcsI RAATTY 1 cut(s) 19
AfaI GTAC 3 cut(s) 32, 64, 473
AfiI CCNNNNNNNGG 3 cut(s) 22, 148, 365
AgsI TTSAA 3 cut(s) 406, 413, 425
AluBI AGCT 6 cut(s) 13, 194, 307, 328, 394, 409
AluI AGCT 6 cut(s) 13, 194, 307, 328, 394, 409
AoxI GGCC 1 cut(s) 311
ApeKI GCWGC 4 cut(s) 75, 194, 307, 328
ApoI RAATTY 1 cut(s) 19
Asp700I GAANNNNTTC 1 cut(s) 182
BaeI ACNNNNGTAYC 2 cut(s) 46, 79
BbvI GCAGC 4 cut(s) 87, 181, 294, 315
BccI CCATC 1 cut(s) 107
BciVI GTATCC 1 cut(s) 149
BfuI GTATCC 1 cut(s) 149
BisI GCNGC 5 cut(s) 76, 195, 308, 311, 329
BlsI GCNGC 5 cut(s) 77, 196, 309, 312, 330
BmsI GCATC 1 cut(s) 455
BsaAI YACGTR 1 cut(s) 30
BsaJI CCNNGG 1 cut(s) 123
Bsc4I CCNNNNNNNGG 3 cut(s) 22, 148, 365
Bse3DI GCAATG 1 cut(s) 385
BseDI CCNNGG 1 cut(s) 123
BseLI CCNNNNNNNGG 3 cut(s) 22, 148, 365
BseMI GCAATG 1 cut(s) 385
BseMII CTCAG 1 cut(s) 284
BseRI GAGGAG 1 cut(s) 85
BseXI GCAGC 4 cut(s) 87, 181, 294, 315
BshFI GGCC 1 cut(s) 313
BsiSI CCGG 1 cut(s) 72
BslFI GGGAC 1 cut(s) 259
BslI CCNNNNNNNGG 3 cut(s) 22, 148, 365
BsmFI GGGAC 1 cut(s) 259
BsnI GGCC 1 cut(s) 313
Bsp143I GATC 1 cut(s) 344
BspACI CCGC 2 cut(s) 310, 355
BspANI GGCC 1 cut(s) 313
BspCNI CTCAG 1 cut(s) 285
BspQI GCTCTTC 1 cut(s) 297
BsrDI GCAATG 1 cut(s) 385
BssECI CCNNGG 1 cut(s) 123
BssMI GATC 1 cut(s) 344
Bst4CI ACNGT 2 cut(s) 62, 476
Bst6I CTCTTC 2 cut(s) 122, 297
BstBAI YACGTR 1 cut(s) 30
BstC8I GCNNGC 3 cut(s) 396, 435, 439
BstDEI CTNAG 2 cut(s) 187, 293
BstKTI GATC 1 cut(s) 347
BstMBI GATC 1 cut(s) 344
BstMWI GCNNNNNNNGC 1 cut(s) 443
BstNSI RCATGY 1 cut(s) 437
BstV1I GCAGC 4 cut(s) 87, 181, 294, 315
BstXI CCANNNNNNTGG 1 cut(s) 370
BsuI GTATCC 1 cut(s) 149
BsuRI GGCC 1 cut(s) 313
BtsI GCAGTG 1 cut(s) 492
BtsIMutI CAGTG 3 cut(s) 136, 481, 492
Cac8I GCNNGC 3 cut(s) 396, 435, 439
CseI GACGC 1 cut(s) 67
Csp6I GTAC 3 cut(s) 31, 63, 472
CviAII CATG 1 cut(s) 434
CviJI RGCY 9 cut(s) 13, 194, 233, 307, 313, 328, 394, 409, 416
CviKI_1 RGCY 9 cut(s) 13, 194, 233, 307, 313, 328, 394, 409, 416
CviQI GTAC 3 cut(s) 31, 63, 472
DdeI CTNAG 2 cut(s) 187, 293
DpnI GATC 1 cut(s) 346
DpnII GATC 1 cut(s) 344
EaeI YGGCCR 1 cut(s) 311
Eam1104I CTCTTC 2 cut(s) 122, 297
EarI CTCTTC 2 cut(s) 122, 297
FaeI CATG 1 cut(s) 437
FaiI YATR 6 cut(s) 107, 160, 323, 435, 451, 498
FalI AAGNNNNNCTT 4 cut(s) 170, 202, 405, 437
FaqI GGGAC 1 cut(s) 259
FatI CATG 1 cut(s) 433
Fnu4HI GCNGC 5 cut(s) 76, 195, 308, 311, 329
Fsp4HI GCNGC 5 cut(s) 76, 195, 308, 311, 329
GluI GCNGC 5 cut(s) 76, 195, 308, 311, 329
HaeIII GGCC 1 cut(s) 313
HapII CCGG 1 cut(s) 72
HgaI GACGC 1 cut(s) 67
Hin1II CATG 1 cut(s) 437
HindIII AAGCTT 1 cut(s) 407
HinfI GANTC 2 cut(s) 266, 383
HpaII CCGG 1 cut(s) 72
Hpy166II GTNNAC 1 cut(s) 490
Hpy188I TCNGA 1 cut(s) 124
Hpy188III TCNNGA 1 cut(s) 16
Hpy8I GTNNAC 1 cut(s) 490
HpyAV CCTTC 1 cut(s) 172
HpyCH4III ACNGT 2 cut(s) 62, 476
HpyCH4IV ACGT 1 cut(s) 29
HpyCH4V TGCA 2 cut(s) 378, 446
HpyF10VI GCNNNNNNNGC 1 cut(s) 443
HpyF3I CTNAG 2 cut(s) 187, 293
HpySE526I ACGT 1 cut(s) 29
Hsp92II CATG 1 cut(s) 437
Kzo9I GATC 1 cut(s) 344
LguI GCTCTTC 1 cut(s) 297
LmnI GCTCC 2 cut(s) 18, 114
LpnPI CCDG 5 cut(s) 29, 85, 159, 404, 476
Lsp1109I GCAGC 4 cut(s) 87, 181, 294, 315
LweI GCATC 1 cut(s) 455
MaeII ACGT 1 cut(s) 29
MaeIII GTNAC 1 cut(s) 25
MalI GATC 1 cut(s) 346
MboI GATC 1 cut(s) 344
MboII GAAGA 4 cut(s) 59, 109, 314, 450
MfeI CAATTG 1 cut(s) 164
MluCI AATT 3 cut(s) 19, 164, 427
MlyI GAGTC 1 cut(s) 377
MnlI CCTC 6 cut(s) 77, 103, 106, 118, 223, 236
MroXI GAANNNNTTC 1 cut(s) 182
MseI TTAA 1 cut(s) 351
MslI CAYNNNNRTG 2 cut(s) 104, 368
MspI CCGG 1 cut(s) 72
MunI CAATTG 1 cut(s) 164
MwoI GCNNNNNNNGC 1 cut(s) 443
NdeII GATC 1 cut(s) 344
NlaIII CATG 1 cut(s) 437
NmuCI GTSAC 1 cut(s) 25
NspI RCATGY 1 cut(s) 437
PaeI GCATGC 1 cut(s) 437
PciSI GCTCTTC 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 182
PfeI GAWTC 1 cut(s) 266
PflMI CCANNNNNTGG 1 cut(s) 22
PkrI GCNGC 5 cut(s) 77, 196, 309, 312, 330
PleI GAGTC 1 cut(s) 377
PpsI GAGTC 1 cut(s) 377
Ppu21I YACGTR 1 cut(s) 30
RsaI GTAC 3 cut(s) 32, 64, 473
RsaNI GTAC 3 cut(s) 31, 63, 472
RseI CAYNNNNRTG 2 cut(s) 104, 368
SapI GCTCTTC 1 cut(s) 297
SaqAI TTAA 1 cut(s) 351
SatI GCNGC 5 cut(s) 76, 195, 308, 311, 329
Sau3AI GATC 1 cut(s) 344
SchI GAGTC 1 cut(s) 377
SetI ASST 9 cut(s) 15, 32, 129, 183, 196, 309, 330, 396, 411
SfaNI GCATC 1 cut(s) 455
SmiMI CAYNNNNRTG 2 cut(s) 104, 368
SphI GCATGC 1 cut(s) 437
Sse9I AATT 3 cut(s) 19, 164, 427
SsiI CCGC 2 cut(s) 310, 355
TaaI ACNGT 2 cut(s) 62, 476
TaiI ACGT 1 cut(s) 32
TasI AATT 3 cut(s) 19, 164, 427
TauI GCSGC 1 cut(s) 313
TfiI GAWTC 1 cut(s) 266
Tru1I TTAA 1 cut(s) 351
Tru9I TTAA 1 cut(s) 351
TscAI CASTG 3 cut(s) 136, 481, 492
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 4 cut(s) 75, 194, 307, 328
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 2 cut(s) 20, 315
TspRI CASTG 3 cut(s) 136, 481, 492
Van91I CCANNNNNTGG 1 cut(s) 22
XapI RAATTY 1 cut(s) 19
XceI RCATGY 1 cut(s) 437
XcmI CCANNNNNNNNNTGG 1 cut(s) 367
XmnI GAANNNNTTC 1 cut(s) 182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.