RLG00000036177

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0002048
Physical Location & Seq
Forward (+)
76991915 .. 76996948
5034 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036177

Sequence Viewer

Length: 384 bp
ATGTTGCTGGAGAAGTTGCTTTTTCGAAAACTCAACCCATGTAGAAGCTGCAACTGGCTGATCTCAATAGTGGGTTCAATTCGGTACAAGAACCCTTGGAGTATCAGTAAGATAGACCAAGCCGTGTCAGATCCAAAAGCACTTGCTGCATTCCAGGCTGTGTTGGAGGCTAATCTGCTCTGTCCTCTATTCTCTGTCATCTATCTTTCACTCGTCATAGAGTTTTATTCTAGTGCAGAATCAATATCACAAAGGATCGGAAAACTGAGAGATGAAGAGCTGCAGCCACTACTTATCGAGCTGCTAAAAGGCTTCATGAGAAATTGGTGGATAATCACCTGTTGGAATTGCATGAAACTCAAAACAAAATCATGTCTACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632

Protein Analysis

128

Amino Acids

14.7

Weight (kDa)

9.13

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF632 PF04782 77 - 111 5.5e-09 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 376
AclWI GGATC 2 cut(s) 125, 263
AfaI GTAC 1 cut(s) 86
AgsI TTSAA 1 cut(s) 78
AjnI CCWGG 1 cut(s) 153
AluBI AGCT 3 cut(s) 48, 280, 301
AluI AGCT 3 cut(s) 48, 280, 301
AlwI GGATC 2 cut(s) 125, 263
ApeKI GCWGC 5 cut(s) 48, 146, 280, 283, 301
AsuHPI GGTGA 1 cut(s) 328
AsuII TTCGAA 1 cut(s) 25
BbvI GCAGC 5 cut(s) 35, 133, 267, 288, 295
BceAI ACGGC 1 cut(s) 107
BciT130I CCWGG 1 cut(s) 155
BfaI CTAG 1 cut(s) 231
BfmI CTRYAG 2 cut(s) 281, 377
BisI GCNGC 5 cut(s) 49, 147, 281, 284, 302
BlsI GCNGC 5 cut(s) 50, 148, 282, 285, 303
Bme1390I CCNGG 1 cut(s) 155
BmrFI CCNGG 1 cut(s) 155
BpmI CTGGAG 1 cut(s) 29
Bpu14I TTCGAA 1 cut(s) 25
BsaJI CCNNGG 1 cut(s) 95
BsaXI ACNNNNNCTCC 2 cut(s) 91, 121
Bse1I ACTGG 1 cut(s) 59
BseBI CCWGG 1 cut(s) 155
BseDI CCNNGG 1 cut(s) 95
BseMII CTCAG 1 cut(s) 257
BseNI ACTGG 1 cut(s) 59
BseXI GCAGC 5 cut(s) 35, 133, 267, 288, 295
BsgI GTGCAG 1 cut(s) 255
BsmI GAATGC 1 cut(s) 149
Bsp119I TTCGAA 1 cut(s) 25
Bsp143I GATC 3 cut(s) 60, 130, 255
BspCNI CTCAG 1 cut(s) 258
BspHI TCATGA 1 cut(s) 315
BspMAI CTGCAG 1 cut(s) 285
BspPI GGATC 2 cut(s) 125, 263
BspQI GCTCTTC 1 cut(s) 270
BspT104I TTCGAA 1 cut(s) 25
BsrI ACTGG 1 cut(s) 59
BssECI CCNNGG 1 cut(s) 95
BssMI GATC 3 cut(s) 60, 130, 255
BssT1I CCWWGG 1 cut(s) 95
Bst2UI CCWGG 1 cut(s) 155
Bst4CI ACNGT 1 cut(s) 381
Bst6I CTCTTC 1 cut(s) 270
BstAPI GCANNNNNTGC 1 cut(s) 146
BstBI TTCGAA 1 cut(s) 25
BstDEI CTNAG 1 cut(s) 266
BstKTI GATC 3 cut(s) 63, 133, 258
BstMBI GATC 3 cut(s) 60, 130, 255
BstMWI GCNNNNNNNGC 2 cut(s) 146, 155
BstNI CCWGG 1 cut(s) 155
BstSCI CCNGG 1 cut(s) 153
BstSFI CTRYAG 2 cut(s) 281, 377
BstV1I GCAGC 5 cut(s) 35, 133, 267, 288, 295
BstX2I RGATCY 1 cut(s) 130
BstYI RGATCY 1 cut(s) 130
CciI TCATGA 1 cut(s) 315
Csp6I GTAC 1 cut(s) 85
CviAII CATG 4 cut(s) 39, 316, 352, 372
CviJI RGCY 9 cut(s) 48, 58, 122, 158, 170, 280, 286, 301, 312
CviKI_1 RGCY 9 cut(s) 48, 58, 122, 158, 170, 280, 286, 301, 312
CviQI GTAC 1 cut(s) 85
DdeI CTNAG 1 cut(s) 266
DpnI GATC 3 cut(s) 62, 132, 257
DpnII GATC 3 cut(s) 60, 130, 255
Eam1104I CTCTTC 1 cut(s) 270
EarI CTCTTC 1 cut(s) 270
Eco130I CCWWGG 1 cut(s) 95
EcoRII CCWGG 1 cut(s) 153
EcoT14I CCWWGG 1 cut(s) 95
ErhI CCWWGG 1 cut(s) 95
FaeI CATG 4 cut(s) 42, 319, 355, 375
FaiI YATR 5 cut(s) 40, 218, 317, 353, 373
FatI CATG 4 cut(s) 38, 315, 351, 371
FblI GTMKAC 1 cut(s) 376
Fnu4HI GCNGC 5 cut(s) 49, 147, 281, 284, 302
Fsp4HI GCNGC 5 cut(s) 49, 147, 281, 284, 302
FspBI CTAG 1 cut(s) 231
GluI GCNGC 5 cut(s) 49, 147, 281, 284, 302
GsuI CTGGAG 1 cut(s) 29
Hin1II CATG 4 cut(s) 42, 319, 355, 375
HinfI GANTC 1 cut(s) 239
HphI GGTGA 1 cut(s) 328
Hpy166II GTNNAC 1 cut(s) 377
Hpy188I TCNGA 2 cut(s) 130, 260
Hpy188III TCNNGA 1 cut(s) 316
Hpy8I GTNNAC 1 cut(s) 377
HpyCH4III ACNGT 1 cut(s) 381
HpyCH4V TGCA 5 cut(s) 51, 149, 236, 283, 351
HpyF10VI GCNNNNNNNGC 2 cut(s) 146, 155
HpyF3I CTNAG 1 cut(s) 266
Hsp92II CATG 4 cut(s) 42, 319, 355, 375
Kzo9I GATC 3 cut(s) 60, 130, 255
LguI GCTCTTC 1 cut(s) 270
LpnPI CCDG 4 cut(s) 40, 140, 167, 352
Lsp1109I GCAGC 5 cut(s) 35, 133, 267, 288, 295
MaeI CTAG 1 cut(s) 231
MalI GATC 3 cut(s) 62, 132, 257
MboI GATC 3 cut(s) 60, 130, 255
MboII GAAGA 1 cut(s) 287
MflI RGATCY 1 cut(s) 130
MluCI AATT 3 cut(s) 78, 322, 346
MmeI TCCRAC 2 cut(s) 144, 323
MnlI CCTC 2 cut(s) 160, 195
MspR9I CCNGG 1 cut(s) 155
Mva1269I GAATGC 1 cut(s) 149
MvaI CCWGG 1 cut(s) 155
MwoI GCNNNNNNNGC 2 cut(s) 146, 155
NdeII GATC 3 cut(s) 60, 130, 255
NlaIII CATG 4 cut(s) 42, 319, 355, 375
NspV TTCGAA 1 cut(s) 25
PagI TCATGA 1 cut(s) 315
PciSI GCTCTTC 1 cut(s) 270
PctI GAATGC 1 cut(s) 149
PfeI GAWTC 1 cut(s) 239
PkrI GCNGC 5 cut(s) 50, 148, 282, 285, 303
Psp6I CCWGG 1 cut(s) 153
PspGI CCWGG 1 cut(s) 153
PstI CTGCAG 1 cut(s) 285
PsuI RGATCY 1 cut(s) 130
RsaI GTAC 1 cut(s) 86
RsaNI GTAC 1 cut(s) 85
SapI GCTCTTC 1 cut(s) 270
SatI GCNGC 5 cut(s) 49, 147, 281, 284, 302
Sau3AI GATC 3 cut(s) 60, 130, 255
ScrFI CCNGG 1 cut(s) 155
SetI ASST 4 cut(s) 50, 282, 303, 341
SfcI CTRYAG 2 cut(s) 281, 377
SfuI TTCGAA 1 cut(s) 25
Sse9I AATT 3 cut(s) 78, 322, 346
SspMI CTAG 1 cut(s) 231
StyD4I CCNGG 1 cut(s) 153
StyI CCWWGG 1 cut(s) 95
TaaI ACNGT 1 cut(s) 381
TaqI TCGA 2 cut(s) 25, 297
TasI AATT 3 cut(s) 78, 322, 346
TfiI GAWTC 1 cut(s) 239
TseI GCWGC 5 cut(s) 48, 146, 280, 283, 301
TspDTI ATGAA 3 cut(s) 288, 304, 368
XmiI GTMKAC 1 cut(s) 376
XspI CTAG 1 cut(s) 231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.