Polynucleotide 5'-hydroxyl-kinase NOL9-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1221000.v1.1 |
| prunus_persica | Prupe.1G119300_v2.0.a1 Prupe.1G119300_v2.0.a1 |
| pyrus_communis | pycom06g16260 |
| rosa_chinensis | RchiOBHm_Chr2g0109271 RchiOBHm_Chr3g0449971 RchiOBHm_Chr5g0055151 RchiOBHm_Chr7g0225831 |
| rosa_laevigata | RLG00000013375 RLG00000014560 RLG00000019363 RLG00000034972 RLG00000036177 |
| rosa_multiflora | Rmu_sc0000820.1_g000009 Rmu_sc0010632.1_g000015 Rmu_sc0021708.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00326060 |
| rosa_rugosa | Rorug04G0011200 Rorug05G0291600 Rorug06G0106800 Rorug06G0229800 |
| rosa_samantha | Rh1AG168800 Rh1BG015000 Rh1CG156200 Rh2BG108000 Rh2BG192200 Rh2CG109800 Rh2DG571800 Rh3AG023500 Rh3CG317800 Rh3DG024000 Rh4AG069700 Rh4AG336500 Rh4CG032300 Rh4DG120200 Rh4DG339000 Rh5CG394600 Rh5DG417000 Rh5DG465600 Rh6BG052200 Rh6CG121900 Rh6DG342900 Rh6DG343000 Rh7AG365200 Rh7CG384100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 333 |
| AciI | CCGC | 1 cut(s) | 382 |
| AcuI | CTGAAG | 1 cut(s) | 150 |
| AfaI | GTAC | 1 cut(s) | 62 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 78 |
| AgsI | TTSAA | 3 cut(s) | 154, 170, 176 |
| AluBI | AGCT | 2 cut(s) | 157, 180 |
| AluI | AGCT | 2 cut(s) | 157, 180 |
| Alw26I | GTCTC | 1 cut(s) | 306 |
| Ama87I | CYCGRG | 1 cut(s) | 337 |
| AspA2I | CCTAGG | 1 cut(s) | 101 |
| AsuHPI | GGTGA | 1 cut(s) | 273 |
| AvaI | CYCGRG | 1 cut(s) | 337 |
| AvrII | CCTAGG | 1 cut(s) | 101 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 60, 93 |
| BbsI | GAAGAC | 1 cut(s) | 279 |
| BccI | CCATC | 1 cut(s) | 233 |
| BceAI | ACGGC | 1 cut(s) | 255 |
| BciVI | GTATCC | 1 cut(s) | 61 |
| BcoDI | GTCTC | 1 cut(s) | 306 |
| BfaI | CTAG | 2 cut(s) | 102, 356 |
| BfuI | GTATCC | 1 cut(s) | 61 |
| BlnI | CCTAGG | 1 cut(s) | 101 |
| BmeT110I | CYCGRG | 1 cut(s) | 337 |
| BmiI | GGNNCC | 2 cut(s) | 207, 269 |
| BmsI | GCATC | 1 cut(s) | 315 |
| BpiI | GAAGAC | 1 cut(s) | 279 |
| BpmI | CTGGAG | 1 cut(s) | 123 |
| BsaJI | CCNNGG | 1 cut(s) | 101 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 259, 289 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 78 |
| BseDI | CCNNGG | 1 cut(s) | 101 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 78 |
| BseMII | CTCAG | 1 cut(s) | 78 |
| BseRI | GAGGAG | 1 cut(s) | 245 |
| BsiHKCI | CYCGRG | 1 cut(s) | 337 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 78 |
| BsmAI | GTCTC | 1 cut(s) | 306 |
| BsoBI | CYCGRG | 1 cut(s) | 337 |
| Bsp143I | GATC | 1 cut(s) | 262 |
| BspACI | CCGC | 1 cut(s) | 382 |
| BspCNI | CTCAG | 1 cut(s) | 79 |
| BspLI | GGNNCC | 2 cut(s) | 207, 269 |
| BssECI | CCNNGG | 1 cut(s) | 101 |
| BssMI | GATC | 1 cut(s) | 262 |
| BssNAI | GTATAC | 1 cut(s) | 334 |
| BssT1I | CCWWGG | 1 cut(s) | 101 |
| Bst1107I | GTATAC | 1 cut(s) | 334 |
| Bst4CI | ACNGT | 1 cut(s) | 285 |
| BstDEI | CTNAG | 1 cut(s) | 87 |
| BstKTI | GATC | 1 cut(s) | 265 |
| BstMAI | GTCTC | 1 cut(s) | 306 |
| BstMBI | GATC | 1 cut(s) | 262 |
| BstV2I | GAAGAC | 1 cut(s) | 279 |
| BstZ17I | GTATAC | 1 cut(s) | 334 |
| BsuI | GTATCC | 1 cut(s) | 61 |
| Csp6I | GTAC | 1 cut(s) | 61 |
| CviAII | CATG | 1 cut(s) | 186 |
| CviJI | RGCY | 4 cut(s) | 157, 180, 270, 390 |
| CviKI_1 | RGCY | 4 cut(s) | 157, 180, 270, 390 |
| CviQI | GTAC | 1 cut(s) | 61 |
| DdeI | CTNAG | 1 cut(s) | 87 |
| DpnI | GATC | 1 cut(s) | 264 |
| DpnII | GATC | 1 cut(s) | 262 |
| Eco130I | CCWWGG | 1 cut(s) | 101 |
| Eco57I | CTGAAG | 1 cut(s) | 150 |
| Eco88I | CYCGRG | 1 cut(s) | 337 |
| EcoT14I | CCWWGG | 1 cut(s) | 101 |
| ErhI | CCWWGG | 1 cut(s) | 101 |
| FaeI | CATG | 1 cut(s) | 189 |
| FaiI | YATR | 5 cut(s) | 40, 48, 187, 334, 346 |
| FatI | CATG | 1 cut(s) | 185 |
| FblI | GTMKAC | 1 cut(s) | 333 |
| FspBI | CTAG | 2 cut(s) | 102, 356 |
| GsuI | CTGGAG | 1 cut(s) | 123 |
| Hin1II | CATG | 1 cut(s) | 189 |
| HindIII | AAGCTT | 2 cut(s) | 155, 178 |
| HphI | GGTGA | 1 cut(s) | 273 |
| Hpy166II | GTNNAC | 1 cut(s) | 334 |
| Hpy188I | TCNGA | 1 cut(s) | 267 |
| Hpy188III | TCNNGA | 2 cut(s) | 140, 209 |
| Hpy8I | GTNNAC | 1 cut(s) | 334 |
| Hpy99I | CGWCG | 1 cut(s) | 276 |
| HpyAV | CCTTC | 3 cut(s) | 157, 288, 323 |
| HpyCH4III | ACNGT | 1 cut(s) | 285 |
| HpyF3I | CTNAG | 1 cut(s) | 87 |
| Hsp92II | CATG | 1 cut(s) | 189 |
| Kzo9I | GATC | 1 cut(s) | 262 |
| LmnI | GCTCC | 2 cut(s) | 196, 267 |
| LpnPI | CCDG | 5 cut(s) | 99, 141, 153, 222, 314 |
| LweI | GCATC | 1 cut(s) | 315 |
| MaeI | CTAG | 2 cut(s) | 102, 356 |
| MaeIII | GTNAC | 1 cut(s) | 133 |
| MalI | GATC | 1 cut(s) | 264 |
| MboI | GATC | 1 cut(s) | 262 |
| MboII | GAAGA | 1 cut(s) | 279 |
| MnlI | CCTC | 5 cut(s) | 108, 223, 304, 318, 372 |
| NdeII | GATC | 1 cut(s) | 262 |
| NlaIII | CATG | 1 cut(s) | 189 |
| NlaIV | GGNNCC | 2 cut(s) | 207, 269 |
| NmuCI | GTSAC | 1 cut(s) | 133 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 271 |
| PspN4I | GGNNCC | 2 cut(s) | 207, 269 |
| RsaI | GTAC | 1 cut(s) | 62 |
| RsaNI | GTAC | 1 cut(s) | 61 |
| Sau3AI | GATC | 1 cut(s) | 262 |
| SetI | ASST | 8 cut(s) | 12, 88, 107, 130, 159, 168, 182, 310 |
| SfaNI | GCATC | 1 cut(s) | 315 |
| SsiI | CCGC | 1 cut(s) | 382 |
| SspMI | CTAG | 2 cut(s) | 102, 356 |
| StyI | CCWWGG | 1 cut(s) | 101 |
| TaaI | ACNGT | 1 cut(s) | 285 |
| TaqI | TCGA | 2 cut(s) | 225, 296 |
| TseFI | GTSAC | 1 cut(s) | 133 |
| Tsp45I | GTSAC | 1 cut(s) | 133 |
| XmaJI | CCTAGG | 1 cut(s) | 101 |
| XmiI | GTMKAC | 1 cut(s) | 333 |
| XspI | CTAG | 2 cut(s) | 102, 356 |