Rh4CG032300

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0002048
Physical Location & Seq
Reverse (-)
6444127 .. 6444941
815 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG032300.1

Sequence Viewer

Length: 312 bp
ATGAGTGAACATGGTTGGCGAAATATGATTTTTTTTGTTACAGGTGTTTGCAACTTGTGTAATGGAGGTGTAAAGTTCGTGCGTGATAATGATCGAAATAGGGACAAAGTTGGAGTTGAAGTAAAGGATTTGTATGCCAGAATTTTGTTTGCCATATGCAGTGGTGAATCAATACCACAAAGGATCGGAAAACTGAGAGATGAAGAGCTGCAGCCACAACTTATCAAGCTGCTAAAGGGCTTCATGAGAAATTGGTGGATAATCACCTGTTGGAACTGCATGAAACTCAAATCAAAATCATGTCTAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632

Protein Analysis

103

Amino Acids

12.04

Weight (kDa)

9.19

Isoelectric Point (pI)

35.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF632 PF04782 31 - 87 2.4e-13 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 191
AcsI RAATTY 1 cut(s) 141
AgsI TTSAA 1 cut(s) 119
AluBI AGCT 2 cut(s) 208, 229
AluI AGCT 2 cut(s) 208, 229
AlwI GGATC 1 cut(s) 191
ApeKI GCWGC 3 cut(s) 208, 211, 229
ApoI RAATTY 1 cut(s) 141
AsuHPI GGTGA 2 cut(s) 176, 256
BbvI GCAGC 3 cut(s) 195, 216, 223
BfaI CTAG 1 cut(s) 305
BfmI CTRYAG 1 cut(s) 209
BisI GCNGC 3 cut(s) 209, 212, 230
BlsI GCNGC 3 cut(s) 210, 213, 231
BsaBI GATNNNNATC 1 cut(s) 90
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bse8I GATNNNNATC 1 cut(s) 90
BseJI GATNNNNATC 1 cut(s) 90
BseMII CTCAG 1 cut(s) 185
BseXI GCAGC 3 cut(s) 195, 216, 223
BslFI GGGAC 1 cut(s) 116
BsmFI GGGAC 1 cut(s) 116
Bsp143I GATC 2 cut(s) 91, 183
BspCNI CTCAG 1 cut(s) 186
BspHI TCATGA 1 cut(s) 243
BspMAI CTGCAG 1 cut(s) 213
BspPI GGATC 1 cut(s) 191
BspQI GCTCTTC 1 cut(s) 198
BssMI GATC 2 cut(s) 91, 183
Bst6I CTCTTC 1 cut(s) 198
BstDEI CTNAG 1 cut(s) 194
BstKTI GATC 2 cut(s) 94, 186
BstMBI GATC 2 cut(s) 91, 183
BstSFI CTRYAG 1 cut(s) 209
BstV1I GCAGC 3 cut(s) 195, 216, 223
BtsI GCAGTG 1 cut(s) 166
BtsIMutI CAGTG 1 cut(s) 166
CciI TCATGA 1 cut(s) 243
CviAII CATG 4 cut(s) 11, 244, 280, 300
CviJI RGCY 4 cut(s) 208, 214, 229, 240
CviKI_1 RGCY 4 cut(s) 208, 214, 229, 240
DdeI CTNAG 1 cut(s) 194
DpnI GATC 2 cut(s) 93, 185
DpnII GATC 2 cut(s) 91, 183
Eam1104I CTCTTC 1 cut(s) 198
EarI CTCTTC 1 cut(s) 198
FaeI CATG 4 cut(s) 14, 247, 283, 303
FaiI YATR 8 cut(s) 12, 26, 135, 155, 157, 245, 281, 301
FaqI GGGAC 1 cut(s) 116
FatI CATG 4 cut(s) 10, 243, 279, 299
FauNDI CATATG 1 cut(s) 155
Fnu4HI GCNGC 3 cut(s) 209, 212, 230
Fsp4HI GCNGC 3 cut(s) 209, 212, 230
FspBI CTAG 1 cut(s) 305
GluI GCNGC 3 cut(s) 209, 212, 230
Hin1II CATG 4 cut(s) 14, 247, 283, 303
HinfI GANTC 1 cut(s) 167
HphI GGTGA 2 cut(s) 176, 256
Hpy166II GTNNAC 1 cut(s) 8
Hpy188I TCNGA 1 cut(s) 188
Hpy188III TCNNGA 2 cut(s) 244, 305
Hpy8I GTNNAC 1 cut(s) 8
HpyCH4V TGCA 4 cut(s) 51, 159, 211, 279
HpyF3I CTNAG 1 cut(s) 194
Hsp92II CATG 4 cut(s) 14, 247, 283, 303
Kzo9I GATC 2 cut(s) 91, 183
LguI GCTCTTC 1 cut(s) 198
LpnPI CCDG 3 cut(s) 27, 151, 280
Lsp1109I GCAGC 3 cut(s) 195, 216, 223
MaeI CTAG 1 cut(s) 305
MaeIII GTNAC 1 cut(s) 37
MalI GATC 2 cut(s) 93, 185
MboI GATC 2 cut(s) 91, 183
MboII GAAGA 1 cut(s) 215
MluCI AATT 2 cut(s) 141, 250
MmeI TCCRAC 2 cut(s) 91, 251
MnlI CCTC 1 cut(s) 59
NdeI CATATG 1 cut(s) 155
NdeII GATC 2 cut(s) 91, 183
NlaIII CATG 4 cut(s) 14, 247, 283, 303
PagI TCATGA 1 cut(s) 243
PciSI GCTCTTC 1 cut(s) 198
PfeI GAWTC 1 cut(s) 167
PkrI GCNGC 3 cut(s) 210, 213, 231
PstI CTGCAG 1 cut(s) 213
SapI GCTCTTC 1 cut(s) 198
SatI GCNGC 3 cut(s) 209, 212, 230
Sau3AI GATC 2 cut(s) 91, 183
SetI ASST 5 cut(s) 46, 70, 210, 231, 269
SfcI CTRYAG 1 cut(s) 209
Sse9I AATT 2 cut(s) 141, 250
SspMI CTAG 1 cut(s) 305
TaqI TCGA 1 cut(s) 94
TasI AATT 2 cut(s) 141, 250
TfiI GAWTC 1 cut(s) 167
TscAI CASTG 1 cut(s) 166
TseI GCWGC 3 cut(s) 208, 211, 229
TspDTI ATGAA 3 cut(s) 216, 232, 296
TspRI CASTG 1 cut(s) 166
XapI RAATTY 1 cut(s) 141
XbaI TCTAGA 1 cut(s) 304
XspI CTAG 1 cut(s) 305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.