Rh3CG317800

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0002048
Physical Location & Seq
Reverse (-)
34000767 .. 34002113
1347 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG317800.1

Sequence Viewer

Length: 426 bp
ATGGTTCCGATGGTCTATGCATTATATATCTTTACGGGCGCACTTCGTCCAGAGATGGTACCACAATTTGCAGGTATGAACAGAAAATGGCAATGTGTCATACGGATACTGCAAATTTCATGGCACCCTTGCAGTGATACTCATCTGGGAATTCTTTCTTCTGATTCAGTTTTCAGCGGGTTAATTGTTGCAACCTTCATATCTCCAACATTGCAGCTTCATGAGAAATTGGTGGATAATCACCTGTTGGAACTGCATGAAACTCAAATCAAAATCATGTCTAGAGTGAGATCACTTAACCGCCCCACCATTGGAATGGTCTGCAATGACTCGCACCAGCTTGCTACTTTCAAGCTTGAAGCCGAACTTCAAAATTGGCATGCTTGCTTTGTATCATACTTTTCTTCCCAGAAAAGCGTACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632

Protein Analysis

141

Amino Acids

16.12

Weight (kDa)

7.76

Isoelectric Point (pI)

43.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF632 PF04782 81 - 139 2.9e-12 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 62
Acc65I GGTACC 1 cut(s) 58
AccB1I GGYRCC 2 cut(s) 58, 123
AciI CCGC 2 cut(s) 177, 301
AcsI RAATTY 2 cut(s) 114, 150
AfaI GTAC 2 cut(s) 60, 420
AfiI CCNNNNNNNGG 1 cut(s) 311
AgsI TTSAA 3 cut(s) 352, 359, 371
AluBI AGCT 3 cut(s) 217, 340, 355
AluI AGCT 3 cut(s) 217, 340, 355
ApeKI GCWGC 1 cut(s) 214
ApoI RAATTY 2 cut(s) 114, 150
Asp700I GAANNNNTTC 1 cut(s) 154
Asp718I GGTACC 1 cut(s) 58
AspLEI GCGC 1 cut(s) 41
AsuHPI GGTGA 1 cut(s) 233
BanI GGYRCC 2 cut(s) 58, 123
BbvI GCAGC 1 cut(s) 226
BccI CCATC 2 cut(s) 4, 49
BciVI GTATCC 1 cut(s) 99
BfaI CTAG 1 cut(s) 282
BfuAI ACCTGC 1 cut(s) 62
BfuI GTATCC 1 cut(s) 99
BisI GCNGC 1 cut(s) 215
BlsI GCNGC 1 cut(s) 216
BmiI GGNNCC 3 cut(s) 6, 60, 125
BsaBI GATNNNNATC 1 cut(s) 141
Bsc4I CCNNNNNNNGG 1 cut(s) 311
Bse3DI GCAATG 3 cut(s) 98, 209, 331
Bse8I GATNNNNATC 1 cut(s) 141
BseJI GATNNNNATC 1 cut(s) 141
BseLI CCNNNNNNNGG 1 cut(s) 311
BseMI GCAATG 3 cut(s) 98, 209, 331
BseXI GCAGC 1 cut(s) 226
BshNI GGYRCC 2 cut(s) 58, 123
BslI CCNNNNNNNGG 1 cut(s) 311
Bsp143I GATC 1 cut(s) 290
BspACI CCGC 2 cut(s) 177, 301
BspHI TCATGA 1 cut(s) 220
BspLI GGNNCC 3 cut(s) 6, 60, 125
BspMI ACCTGC 1 cut(s) 62
BspT107I GGYRCC 2 cut(s) 58, 123
BsrDI GCAATG 3 cut(s) 98, 209, 331
BssMI GATC 1 cut(s) 290
Bst4CI ACNGT 1 cut(s) 423
BstC8I GCNNGC 3 cut(s) 342, 381, 385
BstHHI GCGC 1 cut(s) 41
BstKTI GATC 1 cut(s) 293
BstMBI GATC 1 cut(s) 290
BstNSI RCATGY 1 cut(s) 383
BstV1I GCAGC 1 cut(s) 226
BstXI CCANNNNNNTGG 1 cut(s) 316
BsuI GTATCC 1 cut(s) 99
BtsI GCAGTG 1 cut(s) 139
BtsIMutI CAGTG 1 cut(s) 139
BveI ACCTGC 1 cut(s) 62
Cac8I GCNNGC 3 cut(s) 342, 381, 385
CciI TCATGA 1 cut(s) 220
CfoI GCGC 1 cut(s) 41
Csp6I GTAC 2 cut(s) 59, 419
CviAII CATG 5 cut(s) 120, 221, 257, 277, 380
CviJI RGCY 4 cut(s) 217, 340, 355, 362
CviKI_1 RGCY 4 cut(s) 217, 340, 355, 362
CviQI GTAC 2 cut(s) 59, 419
DpnI GATC 1 cut(s) 292
DpnII GATC 1 cut(s) 290
EcoRI GAATTC 1 cut(s) 150
EcoT22I ATGCAT 1 cut(s) 22
FaeI CATG 5 cut(s) 123, 224, 260, 280, 383
FalI AAGNNNNNCTT 2 cut(s) 351, 383
FatI CATG 5 cut(s) 119, 220, 256, 276, 379
FauI CCCGC 1 cut(s) 170
Fnu4HI GCNGC 1 cut(s) 215
Fsp4HI GCNGC 1 cut(s) 215
FspBI CTAG 1 cut(s) 282
GlaI GCGC 1 cut(s) 40
GluI GCNGC 1 cut(s) 215
HhaI GCGC 1 cut(s) 41
Hin1II CATG 5 cut(s) 123, 224, 260, 280, 383
Hin6I GCGC 1 cut(s) 39
HinP1I GCGC 1 cut(s) 39
HindIII AAGCTT 1 cut(s) 353
HinfI GANTC 2 cut(s) 164, 329
HphI GGTGA 1 cut(s) 233
Hpy188I TCNGA 2 cut(s) 9, 163
Hpy188III TCNNGA 3 cut(s) 50, 221, 282
HpyAV CCTTC 1 cut(s) 205
HpyCH4III ACNGT 1 cut(s) 423
HpyCH4V TGCA 8 cut(s) 20, 71, 112, 132, 191, 214, 256, 324
Hsp92II CATG 5 cut(s) 123, 224, 260, 280, 383
HspAI GCGC 1 cut(s) 39
KpnI GGTACC 1 cut(s) 62
Kzo9I GATC 1 cut(s) 290
LpnPI CCDG 6 cut(s) 57, 63, 131, 257, 350, 422
Lsp1109I GCAGC 1 cut(s) 226
MaeI CTAG 1 cut(s) 282
MalI GATC 1 cut(s) 292
MboI GATC 1 cut(s) 290
MboII GAAGA 2 cut(s) 150, 396
MluCI AATT 6 cut(s) 65, 114, 150, 183, 227, 373
MlyI GAGTC 1 cut(s) 323
MmeI TCCRAC 2 cut(s) 228, 230
Mph1103I ATGCAT 1 cut(s) 22
MroXI GAANNNNTTC 1 cut(s) 154
MseI TTAA 2 cut(s) 182, 297
MslI CAYNNNNRTG 1 cut(s) 314
MspA1I CMGCKG 1 cut(s) 177
NdeII GATC 1 cut(s) 290
NlaIII CATG 5 cut(s) 123, 224, 260, 280, 383
NlaIV GGNNCC 3 cut(s) 6, 60, 125
NsiI ATGCAT 1 cut(s) 22
NspI RCATGY 1 cut(s) 383
PaeI GCATGC 1 cut(s) 383
PagI TCATGA 1 cut(s) 220
PdmI GAANNNNTTC 1 cut(s) 154
PfeI GAWTC 1 cut(s) 164
PkrI GCNGC 1 cut(s) 216
PleI GAGTC 1 cut(s) 323
PpsI GAGTC 1 cut(s) 323
PspN4I GGNNCC 3 cut(s) 6, 60, 125
RsaI GTAC 2 cut(s) 60, 420
RsaNI GTAC 2 cut(s) 59, 419
RseI CAYNNNNRTG 1 cut(s) 314
SaqAI TTAA 2 cut(s) 182, 297
SatI GCNGC 1 cut(s) 215
Sau3AI GATC 1 cut(s) 290
SchI GAGTC 1 cut(s) 323
SetI ASST 6 cut(s) 76, 197, 219, 246, 342, 357
SmiMI CAYNNNNRTG 1 cut(s) 314
SphI GCATGC 1 cut(s) 383
Sse9I AATT 6 cut(s) 65, 114, 150, 183, 227, 373
SsiI CCGC 2 cut(s) 177, 301
SspMI CTAG 1 cut(s) 282
TaaI ACNGT 1 cut(s) 423
TasI AATT 6 cut(s) 65, 114, 150, 183, 227, 373
TfiI GAWTC 1 cut(s) 164
Tru1I TTAA 2 cut(s) 182, 297
Tru9I TTAA 2 cut(s) 182, 297
TscAI CASTG 1 cut(s) 139
TseI GCWGC 1 cut(s) 214
TspDTI ATGAA 5 cut(s) 92, 108, 187, 209, 273
TspGWI ACGGA 1 cut(s) 118
TspRI CASTG 1 cut(s) 139
XapI RAATTY 2 cut(s) 114, 150
XbaI TCTAGA 1 cut(s) 281
XceI RCATGY 1 cut(s) 383
XcmI CCANNNNNNNNNTGG 1 cut(s) 313
XmnI GAANNNNTTC 1 cut(s) 154
XspI CTAG 1 cut(s) 282
Zsp2I ATGCAT 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.