RLG00000014120

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
47628919 .. 47631567
2649 bp
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UTR
Exon/CDS
Intron
RLM00000014120

Sequence Viewer

Length: 759 bp
ATGTTGGATAGGAACCTTTCATTTAAGGAAACGTTGGGGACAGAAGATTATAGAGGTACAAATCTGTTGAAGCTTAAACCAATGCTGACTTTTGCTCTGTCTCAACCGGATTTTATGTTTTTGCCTAGACTGGTTAAGGAGCTTGATGATGCAGCAGTCAAAGTTCAGAAAGTTTTGTATATCAAACTCGAAGAAACCTTGCAGATCGTGCAGTGGTGGCTGAGGAGGTATGATGGAAACCTTTTAGATTCTGCAGCTCTCAAGCAGAGTTCTGTGTCATTCTTCGATGTTGAGAAGCCGGAAACCGCCTCTTTGTGTAATAACACTTGCTTTGTTATTTCAGATTGGAAAAGATTGATCCACGCCATCGGTATAGACATAATTTACACGTACTACGATTTGTGGTTTGAAAGTCAGAGCAGCCAGCCTTTCTTCTACTGGCTGAATGTTGGAGATGGCAAGGAAACAAATCTTGAGCTATGCTCGAGGACAGTTCTACAGAGCAAATGCATCAAGTACCTTGGACCGGATGGTTTCTCATCTAATGTTGGGACCTTGAAATGGGTAAACCATGTCATTCTCTTATCTCAGTTAAATGTTTACAAAGGTGCTGGTGGCATTCAAGCTCTCATGAAAAGCAATGAAAGAAAATTAGCCGAAGAAGATGGGTCAATACTGATGGCCTTTGAAATCCCTTACACCATCATCAGGGCTGCCATTAGAGAACTAACCGAATATATGTGGATCAATTATGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

253

Amino Acids

29.05

Weight (kDa)

5.56

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 306
AclI AACGTT 1 cut(s) 32
AclWI GGATC 2 cut(s) 352, 752
AfaI GTAC 3 cut(s) 58, 392, 518
AfiI CCNNNNNNNGG 3 cut(s) 526, 561, 708
AflIII ACRYGT 1 cut(s) 387
AgsI TTSAA 5 cut(s) 70, 410, 559, 623, 689
AluBI AGCT 5 cut(s) 73, 142, 257, 478, 626
AluI AGCT 5 cut(s) 73, 142, 257, 478, 626
Alw26I GTCTC 1 cut(s) 105
AlwI GGATC 2 cut(s) 352, 752
Ama87I CYCGRG 1 cut(s) 484
AoxI GGCC 1 cut(s) 681
ApeKI GCWGC 4 cut(s) 152, 254, 420, 713
AspS9I GGNCC 2 cut(s) 524, 552
AvaI CYCGRG 1 cut(s) 484
AvaII GGWCC 2 cut(s) 524, 552
BbvCI CCTCAGC 1 cut(s) 221
BbvI GCAGC 4 cut(s) 164, 266, 432, 700
BccI CCATC 7 cut(s) 227, 374, 449, 524, 659, 673, 710
BcoDI GTCTC 1 cut(s) 105
BfaI CTAG 1 cut(s) 126
BfmI CTRYAG 2 cut(s) 252, 497
BisI GCNGC 4 cut(s) 153, 255, 421, 714
BlsI GCNGC 4 cut(s) 154, 256, 422, 715
Bme18I GGWCC 2 cut(s) 524, 552
BmeT110I CYCGRG 1 cut(s) 484
BmgT120I GGNCC 2 cut(s) 524, 552
BmiI GGNNCC 2 cut(s) 14, 553
BmsI GCATC 2 cut(s) 139, 519
BplI GAGNNNNNCTC 2 cut(s) 467, 499
Bpu10I CCTNAGC 1 cut(s) 221
BpuEI CTTGAG 2 cut(s) 245, 494
BsaAI YACGTR 1 cut(s) 390
BsaJI CCNNGG 1 cut(s) 520
BsaWI WCCGGW 2 cut(s) 106, 526
Bsc4I CCNNNNNNNGG 3 cut(s) 526, 561, 708
Bse1I ACTGG 2 cut(s) 135, 443
Bse3DI GCAATG 1 cut(s) 646
BseDI CCNNGG 1 cut(s) 520
BseGI GGATG 1 cut(s) 535
BseLI CCNNNNNNNGG 3 cut(s) 526, 561, 708
BseMI GCAATG 1 cut(s) 646
BseMII CTCAG 2 cut(s) 212, 602
BseNI ACTGG 2 cut(s) 135, 443
BseRI GAGGAG 1 cut(s) 238
BseXI GCAGC 4 cut(s) 164, 266, 432, 700
BsgI GTGCAG 1 cut(s) 230
BshFI GGCC 1 cut(s) 683
BsiHKCI CYCGRG 1 cut(s) 484
BsiSI CCGG 3 cut(s) 107, 299, 527
BslFI GGGAC 2 cut(s) 52, 565
BslI CCNNNNNNNGG 3 cut(s) 526, 561, 708
BsmAI GTCTC 1 cut(s) 105
BsmFI GGGAC 2 cut(s) 52, 565
BsmI GAATGC 1 cut(s) 618
BsnI GGCC 1 cut(s) 683
BsoBI CYCGRG 1 cut(s) 484
Bsp143I GATC 3 cut(s) 204, 357, 744
BspACI CCGC 1 cut(s) 306
BspANI GGCC 1 cut(s) 683
BspCNI CTCAG 2 cut(s) 213, 601
BspHI TCATGA 1 cut(s) 630
BspLI GGNNCC 2 cut(s) 14, 553
BspMAI CTGCAG 1 cut(s) 256
BspPI GGATC 2 cut(s) 352, 752
BsrDI GCAATG 1 cut(s) 646
BsrI ACTGG 2 cut(s) 135, 443
BssECI CCNNGG 1 cut(s) 520
BssMI GATC 3 cut(s) 204, 357, 744
BssT1I CCWWGG 1 cut(s) 520
Bst4CI ACNGT 1 cut(s) 493
BstAPI GCANNNNNTGC 1 cut(s) 208
BstBAI YACGTR 1 cut(s) 390
BstC8I GCNNGC 1 cut(s) 425
BstDEI CTNAG 2 cut(s) 221, 588
BstF5I GGATG 1 cut(s) 535
BstKTI GATC 3 cut(s) 207, 360, 747
BstMAI GTCTC 1 cut(s) 105
BstMBI GATC 3 cut(s) 204, 357, 744
BstMWI GCNNNNNNNGC 2 cut(s) 208, 217
BstSFI CTRYAG 2 cut(s) 252, 497
BstV1I GCAGC 4 cut(s) 164, 266, 432, 700
BsuRI GGCC 1 cut(s) 683
BtsCI GGATG 1 cut(s) 535
BtsI GCAGTG 1 cut(s) 218
BtsIMutI CAGTG 1 cut(s) 218
Cac8I GCNNGC 1 cut(s) 425
CciI TCATGA 1 cut(s) 630
Cfr13I GGNCC 2 cut(s) 524, 552
Csp6I GTAC 3 cut(s) 57, 391, 517
CviAII CATG 2 cut(s) 572, 631
CviQI GTAC 3 cut(s) 57, 391, 517
DdeI CTNAG 2 cut(s) 221, 588
DpnI GATC 3 cut(s) 206, 359, 746
DpnII GATC 3 cut(s) 204, 357, 744
Eco130I CCWWGG 1 cut(s) 520
Eco47I GGWCC 2 cut(s) 524, 552
Eco88I CYCGRG 1 cut(s) 484
EcoO109I RGGNCCY 1 cut(s) 552
EcoT14I CCWWGG 1 cut(s) 520
EcoT22I ATGCAT 2 cut(s) 512, 757
ErhI CCWWGG 1 cut(s) 520
FaeI CATG 2 cut(s) 575, 634
FaqI GGGAC 2 cut(s) 52, 565
FatI CATG 2 cut(s) 571, 630
Fnu4HI GCNGC 4 cut(s) 153, 255, 421, 714
FokI GGATG 1 cut(s) 542
Fsp4HI GCNGC 4 cut(s) 153, 255, 421, 714
FspBI CTAG 1 cut(s) 126
GluI GCNGC 4 cut(s) 153, 255, 421, 714
HaeIII GGCC 1 cut(s) 683
HapII CCGG 3 cut(s) 107, 299, 527
Hin1II CATG 2 cut(s) 575, 634
HindIII AAGCTT 1 cut(s) 71
HinfI GANTC 1 cut(s) 248
HpaII CCGG 3 cut(s) 107, 299, 527
Hpy166II GTNNAC 2 cut(s) 568, 601
Hpy188I TCNGA 3 cut(s) 168, 343, 417
Hpy188III TCNNGA 2 cut(s) 473, 631
Hpy8I GTNNAC 2 cut(s) 568, 601
HpyCH4III ACNGT 1 cut(s) 493
HpyCH4IV ACGT 2 cut(s) 32, 389
HpyCH4V TGCA 6 cut(s) 152, 202, 211, 254, 510, 755
HpyF10VI GCNNNNNNNGC 2 cut(s) 208, 217
HpyF3I CTNAG 2 cut(s) 221, 588
HpySE526I ACGT 2 cut(s) 32, 389
Hsp92II CATG 2 cut(s) 575, 634
Kzo9I GATC 3 cut(s) 204, 357, 744
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 8 cut(s) 116, 120, 312, 424, 437, 540, 597, 694
Lsp1109I GCAGC 4 cut(s) 164, 266, 432, 700
LweI GCATC 2 cut(s) 139, 519
MaeI CTAG 1 cut(s) 126
MaeII ACGT 2 cut(s) 32, 389
MalI GATC 3 cut(s) 206, 359, 746
MboI GATC 3 cut(s) 204, 357, 744
MboII GAAGA 6 cut(s) 56, 203, 274, 424, 671, 674
MluCI AATT 3 cut(s) 381, 650, 748
MmeI TCCRAC 1 cut(s) 430
MnlI CCTC 5 cut(s) 47, 216, 219, 319, 480
Mph1103I ATGCAT 2 cut(s) 512, 757
MseI TTAA 4 cut(s) 24, 75, 135, 593
MspI CCGG 3 cut(s) 107, 299, 527
Mva1269I GAATGC 1 cut(s) 618
MwoI GCNNNNNNNGC 2 cut(s) 208, 217
NdeII GATC 3 cut(s) 204, 357, 744
NlaIII CATG 2 cut(s) 575, 634
NlaIV GGNNCC 2 cut(s) 14, 553
NsiI ATGCAT 2 cut(s) 512, 757
PaeR7I CTCGAG 1 cut(s) 484
PagI TCATGA 1 cut(s) 630
PctI GAATGC 1 cut(s) 618
PfeI GAWTC 1 cut(s) 248
PkrI GCNGC 4 cut(s) 154, 256, 422, 715
Ppu21I YACGTR 1 cut(s) 390
PpuMI RGGWCCY 1 cut(s) 552
Psp1406I AACGTT 1 cut(s) 32
Psp5II RGGWCCY 1 cut(s) 552
PspN4I GGNNCC 2 cut(s) 14, 553
PspPI GGNCC 2 cut(s) 524, 552
PspPPI RGGWCCY 1 cut(s) 552
PspXI VCTCGAGB 1 cut(s) 484
PstI CTGCAG 1 cut(s) 256
RsaI GTAC 3 cut(s) 58, 392, 518
RsaNI GTAC 3 cut(s) 57, 391, 517
SaqAI TTAA 4 cut(s) 24, 75, 135, 593
SatI GCNGC 4 cut(s) 153, 255, 421, 714
Sau3AI GATC 3 cut(s) 204, 357, 744
Sau96I GGNCC 2 cut(s) 524, 552
SfaNI GCATC 2 cut(s) 139, 519
SfcI CTRYAG 2 cut(s) 252, 497
Sfr274I CTCGAG 1 cut(s) 484
SinI GGWCC 2 cut(s) 524, 552
SlaI CTCGAG 1 cut(s) 484
SmlI CTYRAG 3 cut(s) 260, 473, 484
SmoI CTYRAG 3 cut(s) 260, 473, 484
Sse9I AATT 3 cut(s) 381, 650, 748
SsiI CCGC 1 cut(s) 306
SspMI CTAG 1 cut(s) 126
StyI CCWWGG 1 cut(s) 520
TaaI ACNGT 1 cut(s) 493
TaiI ACGT 2 cut(s) 35, 392
TaqI TCGA 3 cut(s) 189, 285, 485
TasI AATT 3 cut(s) 381, 650, 748
TfiI GAWTC 1 cut(s) 248
Tru1I TTAA 4 cut(s) 24, 75, 135, 593
Tru9I TTAA 4 cut(s) 24, 75, 135, 593
TscAI CASTG 1 cut(s) 218
TseI GCWGC 4 cut(s) 152, 254, 420, 713
TspDTI ATGAA 3 cut(s) 9, 647, 657
TspRI CASTG 1 cut(s) 218
VpaK11BI GGWCC 2 cut(s) 524, 552
XhoI CTCGAG 1 cut(s) 484
XspI CTAG 1 cut(s) 126
Zsp2I ATGCAT 2 cut(s) 512, 757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.