RLG00000033861

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0003468
Physical Location & Seq
Reverse (-)
33410282 .. 33411464
1183 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033861

Sequence Viewer

Length: 318 bp
ATGTTTTTGCCTAGACCGGTTAAGGAGCTTGATGATGCAGCAGTCAAAGTTCAGAAAGTTTTGTATATCAAACTCGAAGAAACCTTGCAGATTGTGCAGTGGTGGCTGAGGAGGTATGTTAATGGAAAACTTTTAGATTCTGCAGCTCTCAAGCAGAGTTTTGTGTCATTCTTCGATGTTGAGAAGCCGGAAACCGCCTCTTTGTGGCTGGATGTTGGAGATGCAAAGAAACAAATCTTGAGATATGCTCGAGGGCAGTTCTACAGAGCCAATGCATCAAGTACCTTGGACCGAAAGAAAGAAAAGCCTATGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

106

Amino Acids

12.29

Weight (kDa)

9.73

Isoelectric Point (pI)

40.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 195
AfaI GTAC 1 cut(s) 283
AfiI CCNNNNNNNGG 1 cut(s) 204
AgeI ACCGGT 1 cut(s) 16
AluBI AGCT 2 cut(s) 28, 146
AluI AGCT 2 cut(s) 28, 146
Ama87I CYCGRG 1 cut(s) 249
ApeKI GCWGC 2 cut(s) 38, 143
AsiGI ACCGGT 1 cut(s) 16
AspS9I GGNCC 1 cut(s) 289
AvaI CYCGRG 1 cut(s) 249
AvaII GGWCC 1 cut(s) 289
BbvCI CCTCAGC 1 cut(s) 107
BbvI GCAGC 2 cut(s) 50, 155
BfaI CTAG 1 cut(s) 12
BfmI CTRYAG 2 cut(s) 141, 262
BisI GCNGC 2 cut(s) 39, 144
BlsI GCNGC 2 cut(s) 40, 145
Bme18I GGWCC 1 cut(s) 289
BmeT110I CYCGRG 1 cut(s) 249
BmgT120I GGNCC 1 cut(s) 289
BmsI GCATC 3 cut(s) 25, 211, 284
BplI GAGNNNNNCTC 2 cut(s) 232, 264
Bpu10I CCTNAGC 1 cut(s) 107
BpuEI CTTGAG 2 cut(s) 134, 259
BsaJI CCNNGG 1 cut(s) 285
BsaWI WCCGGW 1 cut(s) 16
Bsc4I CCNNNNNNNGG 1 cut(s) 204
Bse118I RCCGGY 1 cut(s) 16
BseDI CCNNGG 1 cut(s) 285
BseGI GGATG 1 cut(s) 217
BseLI CCNNNNNNNGG 1 cut(s) 204
BseMII CTCAG 1 cut(s) 98
BseRI GAGGAG 1 cut(s) 124
BseXI GCAGC 2 cut(s) 50, 155
BsgI GTGCAG 1 cut(s) 116
BshTI ACCGGT 1 cut(s) 16
BsiHKCI CYCGRG 1 cut(s) 249
BsiSI CCGG 2 cut(s) 17, 188
BslI CCNNNNNNNGG 1 cut(s) 204
BsoBI CYCGRG 1 cut(s) 249
BspACI CCGC 1 cut(s) 195
BspCNI CTCAG 1 cut(s) 99
BspMAI CTGCAG 1 cut(s) 145
BsrFI RCCGGY 1 cut(s) 16
BssAI RCCGGY 1 cut(s) 16
BssECI CCNNGG 1 cut(s) 285
BssT1I CCWWGG 1 cut(s) 285
BstAPI GCANNNNNTGC 1 cut(s) 94
BstDEI CTNAG 1 cut(s) 107
BstF5I GGATG 1 cut(s) 217
BstMWI GCNNNNNNNGC 2 cut(s) 94, 103
BstSFI CTRYAG 2 cut(s) 141, 262
BstV1I GCAGC 2 cut(s) 50, 155
BtsCI GGATG 1 cut(s) 217
BtsI GCAGTG 1 cut(s) 104
BtsIMutI CAGTG 1 cut(s) 104
Cfr10I RCCGGY 1 cut(s) 16
Cfr13I GGNCC 1 cut(s) 289
Csp6I GTAC 1 cut(s) 282
CspAI ACCGGT 1 cut(s) 16
CviJI RGCY 7 cut(s) 28, 106, 146, 187, 208, 269, 307
CviKI_1 RGCY 7 cut(s) 28, 106, 146, 187, 208, 269, 307
CviQI GTAC 1 cut(s) 282
DdeI CTNAG 1 cut(s) 107
Eco130I CCWWGG 1 cut(s) 285
Eco47I GGWCC 1 cut(s) 289
Eco88I CYCGRG 1 cut(s) 249
EcoT14I CCWWGG 1 cut(s) 285
EcoT22I ATGCAT 1 cut(s) 277
ErhI CCWWGG 1 cut(s) 285
FaiI YATR 4 cut(s) 66, 117, 246, 311
Fnu4HI GCNGC 2 cut(s) 39, 144
FokI GGATG 1 cut(s) 224
Fsp4HI GCNGC 2 cut(s) 39, 144
FspBI CTAG 1 cut(s) 12
GluI GCNGC 2 cut(s) 39, 144
HapII CCGG 2 cut(s) 17, 188
HinfI GANTC 1 cut(s) 137
HpaII CCGG 2 cut(s) 17, 188
Hpy188I TCNGA 1 cut(s) 54
Hpy188III TCNNGA 1 cut(s) 238
HpyCH4V TGCA 6 cut(s) 38, 88, 97, 143, 224, 275
HpyF10VI GCNNNNNNNGC 2 cut(s) 94, 103
HpyF3I CTNAG 1 cut(s) 107
LmnI GCTCC 1 cut(s) 25
LpnPI CCDG 3 cut(s) 30, 194, 201
Lsp1109I GCAGC 2 cut(s) 50, 155
LweI GCATC 3 cut(s) 25, 211, 284
MaeI CTAG 1 cut(s) 12
MboII GAAGA 2 cut(s) 89, 163
MmeI TCCRAC 1 cut(s) 196
MnlI CCTC 4 cut(s) 102, 105, 208, 245
Mph1103I ATGCAT 1 cut(s) 277
MseI TTAA 2 cut(s) 21, 120
MspI CCGG 2 cut(s) 17, 188
MwoI GCNNNNNNNGC 2 cut(s) 94, 103
NsiI ATGCAT 1 cut(s) 277
PaeR7I CTCGAG 1 cut(s) 249
PfeI GAWTC 1 cut(s) 137
PinAI ACCGGT 1 cut(s) 16
PkrI GCNGC 2 cut(s) 40, 145
PspPI GGNCC 1 cut(s) 289
PspXI VCTCGAGB 1 cut(s) 249
PstI CTGCAG 1 cut(s) 145
RsaI GTAC 1 cut(s) 283
RsaNI GTAC 1 cut(s) 282
SaqAI TTAA 2 cut(s) 21, 120
SatI GCNGC 2 cut(s) 39, 144
Sau96I GGNCC 1 cut(s) 289
SetI ASST 5 cut(s) 30, 86, 116, 148, 287
SfaNI GCATC 3 cut(s) 25, 211, 284
SfcI CTRYAG 2 cut(s) 141, 262
Sfr274I CTCGAG 1 cut(s) 249
SinI GGWCC 1 cut(s) 289
SlaI CTCGAG 1 cut(s) 249
SmlI CTYRAG 3 cut(s) 149, 238, 249
SmoI CTYRAG 3 cut(s) 149, 238, 249
SsiI CCGC 1 cut(s) 195
SspMI CTAG 1 cut(s) 12
StyI CCWWGG 1 cut(s) 285
TaqI TCGA 3 cut(s) 75, 174, 250
TaqII GACCGA 1 cut(s) 306
TfiI GAWTC 1 cut(s) 137
Tru1I TTAA 2 cut(s) 21, 120
Tru9I TTAA 2 cut(s) 21, 120
TscAI CASTG 1 cut(s) 104
TseI GCWGC 2 cut(s) 38, 143
TspRI CASTG 1 cut(s) 104
VpaK11BI GGWCC 1 cut(s) 289
XhoI CTCGAG 1 cut(s) 249
XspI CTAG 1 cut(s) 12
Zsp2I ATGCAT 1 cut(s) 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.