Rh3CG369500

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0003468
Physical Location & Seq
Forward (+)
46912607 .. 46922952
10346 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG369500.1

Sequence Viewer

Length: 681 bp
ATGTTGGATAGGAACCTTTCATTTAAGGAAACGTTGGGGACAGAAGATTGTAGAGGTAAAAATCTGTTGAAGCTTAAACCAATGCTGACTTTTGCTCTGTCTCAACTGGATTTTATGTTTTTGCCTAGACTGGTTAAGGAGCTTGATGATGCAGCAGTCAAAGTTCAGAAAGTTTTGTATATCAAACTTGAAGAAACCTTGCAGATCGTGCAGTGGTGGCTGAGGAGATGGAAACCTTTTAGATTCTGCAGCTCTCAAGCAGAGTTCTGTGCTGCGAAGATTGGAAAAGGTTTGTCTAAGGATGAGAAAGCACAAAAGTTAGCTCTTCAACATTGGCTTGAAGCTATTGATCCACGCCATCGGTATAGACACAATTTACACATGTACTACTACTATTTGTGGTTTGAAAGTCATACCAGCCAGCTTTCTTCTACTGGTAAGCTGAATGTTGGAGATGGCAAGGAAACAAATCTTGATCTATGCTTGAGGACAGCTCTACAGAGCCAATGCATCAAGTACCTTGGACCGGATGGTTTCTCATCTAATGTTGGGACCTTGAAATGGGCAAACCATGTCATTCTCTTATCTCAGAAAAGTGCAAAGCAAAACAGCAACAGTAAACAAAATTTCATTCACAATGAAACCTCTCAGAAAAGCCATAACAATGACCAGTACCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

226

Amino Acids

26.31

Weight (kDa)

9.35

Isoelectric Point (pI)

35.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 32
AclWI GGATC 1 cut(s) 344
AcsI RAATTY 1 cut(s) 625
AfaI GTAC 3 cut(s) 386, 518, 674
AfiI CCNNNNNNNGG 2 cut(s) 526, 561
AflIII ACRYGT 1 cut(s) 381
AgsI TTSAA 6 cut(s) 70, 191, 329, 341, 407, 559
AluBI AGCT 8 cut(s) 73, 142, 252, 323, 344, 424, 442, 494
AluI AGCT 8 cut(s) 73, 142, 252, 323, 344, 424, 442, 494
Alw26I GTCTC 1 cut(s) 105
AlwI GGATC 1 cut(s) 344
ApeKI GCWGC 3 cut(s) 152, 249, 272
ApoI RAATTY 1 cut(s) 625
AspS9I GGNCC 2 cut(s) 524, 552
AvaII GGWCC 2 cut(s) 524, 552
BbvCI CCTCAGC 1 cut(s) 221
BbvI GCAGC 3 cut(s) 164, 259, 261
BccI CCATC 4 cut(s) 222, 366, 449, 524
BcoDI GTCTC 1 cut(s) 105
BfaI CTAG 1 cut(s) 126
BfmI CTRYAG 2 cut(s) 247, 497
BisI GCNGC 3 cut(s) 153, 250, 273
BlsI GCNGC 3 cut(s) 154, 251, 274
Bme18I GGWCC 2 cut(s) 524, 552
BmgT120I GGNCC 2 cut(s) 524, 552
BmiI GGNNCC 2 cut(s) 14, 553
BmsI GCATC 2 cut(s) 139, 519
BplI GAGNNNNNCTC 2 cut(s) 478, 510
Bpu10I CCTNAGC 1 cut(s) 221
BpuEI CTTGAG 2 cut(s) 240, 505
BsaJI CCNNGG 1 cut(s) 520
BsaWI WCCGGW 1 cut(s) 526
Bsc4I CCNNNNNNNGG 2 cut(s) 526, 561
Bse1I ACTGG 4 cut(s) 111, 135, 439, 670
BseDI CCNNGG 1 cut(s) 520
BseGI GGATG 2 cut(s) 307, 535
BseLI CCNNNNNNNGG 2 cut(s) 526, 561
BseMII CTCAG 3 cut(s) 212, 602, 662
BseNI ACTGG 4 cut(s) 111, 135, 439, 670
BseRI GAGGAG 1 cut(s) 238
BseXI GCAGC 3 cut(s) 164, 259, 261
BsgI GTGCAG 1 cut(s) 230
BsiSI CCGG 1 cut(s) 527
BslFI GGGAC 2 cut(s) 52, 565
BslI CCNNNNNNNGG 2 cut(s) 526, 561
BsmAI GTCTC 1 cut(s) 105
BsmFI GGGAC 2 cut(s) 52, 565
Bsp143I GATC 3 cut(s) 204, 349, 475
BspCNI CTCAG 3 cut(s) 213, 601, 661
BspLI GGNNCC 2 cut(s) 14, 553
BspMAI CTGCAG 1 cut(s) 251
BspPI GGATC 1 cut(s) 344
BspQI GCTCTTC 1 cut(s) 330
BsrI ACTGG 4 cut(s) 111, 135, 439, 670
BssECI CCNNGG 1 cut(s) 520
BssMI GATC 3 cut(s) 204, 349, 475
BssT1I CCWWGG 1 cut(s) 520
Bst4CI ACNGT 1 cut(s) 617
Bst6I CTCTTC 1 cut(s) 330
BstAPI GCANNNNNTGC 1 cut(s) 208
BstC8I GCNNGC 1 cut(s) 422
BstDEI CTNAG 4 cut(s) 221, 297, 588, 648
BstF5I GGATG 2 cut(s) 307, 535
BstKTI GATC 3 cut(s) 207, 352, 478
BstMAI GTCTC 1 cut(s) 105
BstMBI GATC 3 cut(s) 204, 349, 475
BstMWI GCNNNNNNNGC 2 cut(s) 208, 217
BstNSI RCATGY 1 cut(s) 385
BstSFI CTRYAG 2 cut(s) 247, 497
BstV1I GCAGC 3 cut(s) 164, 259, 261
BtsCI GGATG 2 cut(s) 307, 535
BtsI GCAGTG 1 cut(s) 218
BtsIMutI CAGTG 1 cut(s) 218
Cac8I GCNNGC 1 cut(s) 422
Cfr13I GGNCC 2 cut(s) 524, 552
Csp6I GTAC 3 cut(s) 385, 517, 673
CviAII CATG 3 cut(s) 382, 572, 678
CviQI GTAC 3 cut(s) 385, 517, 673
DdeI CTNAG 4 cut(s) 221, 297, 588, 648
DpnI GATC 3 cut(s) 206, 351, 477
DpnII GATC 3 cut(s) 204, 349, 475
Eam1104I CTCTTC 1 cut(s) 330
EarI CTCTTC 1 cut(s) 330
Eco130I CCWWGG 1 cut(s) 520
Eco47I GGWCC 2 cut(s) 524, 552
EcoO109I RGGNCCY 1 cut(s) 552
EcoT14I CCWWGG 1 cut(s) 520
EcoT22I ATGCAT 1 cut(s) 512
ErhI CCWWGG 1 cut(s) 520
FaeI CATG 3 cut(s) 385, 575, 681
FaiI YATR 9 cut(s) 116, 180, 366, 383, 414, 481, 573, 660, 679
FaqI GGGAC 2 cut(s) 52, 565
FatI CATG 3 cut(s) 381, 571, 677
Fnu4HI GCNGC 3 cut(s) 153, 250, 273
FokI GGATG 2 cut(s) 314, 542
Fsp4HI GCNGC 3 cut(s) 153, 250, 273
FspBI CTAG 1 cut(s) 126
GluI GCNGC 3 cut(s) 153, 250, 273
HapII CCGG 1 cut(s) 527
Hin1II CATG 3 cut(s) 385, 575, 681
HindIII AAGCTT 1 cut(s) 71
HinfI GANTC 1 cut(s) 243
HpaII CCGG 1 cut(s) 527
Hpy166II GTNNAC 1 cut(s) 620
Hpy188I TCNGA 3 cut(s) 168, 591, 651
Hpy188III TCNNGA 1 cut(s) 473
Hpy8I GTNNAC 1 cut(s) 620
HpyCH4III ACNGT 1 cut(s) 617
HpyCH4IV ACGT 1 cut(s) 32
HpyCH4V TGCA 6 cut(s) 152, 202, 211, 249, 510, 599
HpyF10VI GCNNNNNNNGC 2 cut(s) 208, 217
HpyF3I CTNAG 4 cut(s) 221, 297, 588, 648
HpySE526I ACGT 1 cut(s) 32
Hsp92II CATG 3 cut(s) 385, 575, 681
Kzo9I GATC 3 cut(s) 204, 349, 475
LguI GCTCTTC 1 cut(s) 330
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 6 cut(s) 92, 116, 420, 430, 434, 540
Lsp1109I GCAGC 3 cut(s) 164, 259, 261
LweI GCATC 2 cut(s) 139, 519
MaeI CTAG 1 cut(s) 126
MaeII ACGT 1 cut(s) 32
MalI GATC 3 cut(s) 206, 351, 477
MboI GATC 3 cut(s) 204, 349, 475
MboII GAAGA 5 cut(s) 56, 203, 289, 317, 420
MluCI AATT 2 cut(s) 373, 625
MmeI TCCRAC 1 cut(s) 430
MnlI CCTC 4 cut(s) 47, 216, 480, 655
Mph1103I ATGCAT 1 cut(s) 512
MseI TTAA 3 cut(s) 24, 75, 135
MslI CAYNNNNRTG 1 cut(s) 663
MspI CCGG 1 cut(s) 527
MwoI GCNNNNNNNGC 2 cut(s) 208, 217
NdeII GATC 3 cut(s) 204, 349, 475
NlaIII CATG 3 cut(s) 385, 575, 681
NlaIV GGNNCC 2 cut(s) 14, 553
NsiI ATGCAT 1 cut(s) 512
NspI RCATGY 1 cut(s) 385
PciI ACATGT 1 cut(s) 381
PciSI GCTCTTC 1 cut(s) 330
PfeI GAWTC 1 cut(s) 243
PkrI GCNGC 3 cut(s) 154, 251, 274
PpuMI RGGWCCY 1 cut(s) 552
PscI ACATGT 1 cut(s) 381
Psp1406I AACGTT 1 cut(s) 32
Psp5II RGGWCCY 1 cut(s) 552
PspN4I GGNNCC 2 cut(s) 14, 553
PspPI GGNCC 2 cut(s) 524, 552
PspPPI RGGWCCY 1 cut(s) 552
PstI CTGCAG 1 cut(s) 251
RsaI GTAC 3 cut(s) 386, 518, 674
RsaNI GTAC 3 cut(s) 385, 517, 673
RseI CAYNNNNRTG 1 cut(s) 663
SapI GCTCTTC 1 cut(s) 330
SaqAI TTAA 3 cut(s) 24, 75, 135
SatI GCNGC 3 cut(s) 153, 250, 273
Sau3AI GATC 3 cut(s) 204, 349, 475
Sau96I GGNCC 2 cut(s) 524, 552
SfaNI GCATC 2 cut(s) 139, 519
SfcI CTRYAG 2 cut(s) 247, 497
SinI GGWCC 2 cut(s) 524, 552
SmiMI CAYNNNNRTG 1 cut(s) 663
SmlI CTYRAG 2 cut(s) 255, 484
SmoI CTYRAG 2 cut(s) 255, 484
Sse9I AATT 2 cut(s) 373, 625
SspMI CTAG 1 cut(s) 126
StyI CCWWGG 1 cut(s) 520
TaaI ACNGT 1 cut(s) 617
TaiI ACGT 1 cut(s) 35
TasI AATT 2 cut(s) 373, 625
TatI WGTACW 1 cut(s) 384
TfiI GAWTC 1 cut(s) 243
Tru1I TTAA 3 cut(s) 24, 75, 135
Tru9I TTAA 3 cut(s) 24, 75, 135
TscAI CASTG 1 cut(s) 218
TseI GCWGC 3 cut(s) 152, 249, 272
TspDTI ATGAA 3 cut(s) 9, 619, 654
TspRI CASTG 1 cut(s) 218
VpaK11BI GGWCC 2 cut(s) 524, 552
XapI RAATTY 1 cut(s) 625
XceI RCATGY 1 cut(s) 385
XspI CTAG 1 cut(s) 126
Zsp2I ATGCAT 1 cut(s) 512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.