Rh5CG572800

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
81039290 .. 81039601
312 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG572800.1

Sequence Viewer

Length: 312 bp
ATGAACCTTTCGTTTAAGCCTGAAAATGTAATGTTGGATAGGAACCTTTCATTTAAGGAAACGTTGGGGACAGAAGATTGTAGAGGTAAAAATCTGTTGAAGCTTAAACCAATGCTGACTTTTGCTCTGTCTCAACCGGATTTTATGTTTTTGCCTAGACTGGTTAAGGAGCTTGATGATGCAGCAGTCAAAGTTCAGAAAGTTTTGTATATCAAACTCAAAGAAACCTTACAGATCGTGCAGTGGTGCCTGAGGAGGTATGGTAATTATTTTGTTACATGCTTGGTATGCTTCAATTTCAGTTTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

103

Amino Acids

12.12

Weight (kDa)

9.16

Isoelectric Point (pI)

14.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 246
AclI AACGTT 1 cut(s) 62
AgsI TTSAA 2 cut(s) 100, 295
AluBI AGCT 2 cut(s) 103, 172
AluI AGCT 2 cut(s) 103, 172
Alw26I GTCTC 1 cut(s) 135
ApeKI GCWGC 1 cut(s) 182
AxyI CCTNAGG 1 cut(s) 251
BanI GGYRCC 1 cut(s) 246
BbvI GCAGC 1 cut(s) 194
BcoDI GTCTC 1 cut(s) 135
BfaI CTAG 1 cut(s) 156
BisI GCNGC 1 cut(s) 183
BlsI GCNGC 1 cut(s) 184
BmiI GGNNCC 2 cut(s) 44, 248
BmsI GCATC 1 cut(s) 169
BsaWI WCCGGW 1 cut(s) 136
BsaXI ACNNNNNCTCC 2 cut(s) 247, 277
Bse1I ACTGG 1 cut(s) 165
Bse21I CCTNAGG 1 cut(s) 251
BseMII CTCAG 1 cut(s) 242
BseNI ACTGG 1 cut(s) 165
BseRI GAGGAG 1 cut(s) 268
BseXI GCAGC 1 cut(s) 194
BsgI GTGCAG 1 cut(s) 260
BshNI GGYRCC 1 cut(s) 246
BsiSI CCGG 1 cut(s) 137
BslFI GGGAC 1 cut(s) 82
BsmAI GTCTC 1 cut(s) 135
BsmFI GGGAC 1 cut(s) 82
Bsp143I GATC 1 cut(s) 234
BspCNI CTCAG 1 cut(s) 243
BspLI GGNNCC 2 cut(s) 44, 248
BspT107I GGYRCC 1 cut(s) 246
BsrI ACTGG 1 cut(s) 165
BssMI GATC 1 cut(s) 234
BstDEI CTNAG 1 cut(s) 251
BstKTI GATC 1 cut(s) 237
BstMAI GTCTC 1 cut(s) 135
BstMBI GATC 1 cut(s) 234
BstMWI GCNNNNNNNGC 1 cut(s) 288
BstNSI RCATGY 1 cut(s) 282
BstV1I GCAGC 1 cut(s) 194
Bsu36I CCTNAGG 1 cut(s) 251
BtsI GCAGTG 1 cut(s) 248
BtsIMutI CAGTG 1 cut(s) 248
CviAII CATG 1 cut(s) 279
CviJI RGCY 3 cut(s) 19, 103, 172
CviKI_1 RGCY 3 cut(s) 19, 103, 172
DdeI CTNAG 1 cut(s) 251
DpnI GATC 1 cut(s) 236
DpnII GATC 1 cut(s) 234
Eco81I CCTNAGG 1 cut(s) 251
FaeI CATG 1 cut(s) 282
FaiI YATR 5 cut(s) 146, 210, 261, 280, 289
FaqI GGGAC 1 cut(s) 82
FatI CATG 1 cut(s) 278
Fnu4HI GCNGC 1 cut(s) 183
Fsp4HI GCNGC 1 cut(s) 183
FspBI CTAG 1 cut(s) 156
GluI GCNGC 1 cut(s) 183
HapII CCGG 1 cut(s) 137
Hin1II CATG 1 cut(s) 282
HindIII AAGCTT 1 cut(s) 101
HpaII CCGG 1 cut(s) 137
Hpy188I TCNGA 1 cut(s) 198
HpyCH4IV ACGT 1 cut(s) 62
HpyCH4V TGCA 2 cut(s) 182, 241
HpyF10VI GCNNNNNNNGC 1 cut(s) 288
HpyF3I CTNAG 1 cut(s) 251
HpySE526I ACGT 1 cut(s) 62
Hsp92II CATG 1 cut(s) 282
Kzo9I GATC 1 cut(s) 234
LmnI GCTCC 1 cut(s) 169
LpnPI CCDG 4 cut(s) 33, 146, 150, 263
Lsp1109I GCAGC 1 cut(s) 194
LweI GCATC 1 cut(s) 169
MaeI CTAG 1 cut(s) 156
MaeII ACGT 1 cut(s) 62
MaeIII GTNAC 1 cut(s) 274
MalI GATC 1 cut(s) 236
MboI GATC 1 cut(s) 234
MboII GAAGA 1 cut(s) 86
MluCI AATT 2 cut(s) 265, 295
MmeI TCCRAC 1 cut(s) 15
MnlI CCTC 3 cut(s) 77, 246, 249
MseI TTAA 4 cut(s) 15, 54, 105, 165
MspI CCGG 1 cut(s) 137
MwoI GCNNNNNNNGC 1 cut(s) 288
NdeII GATC 1 cut(s) 234
NlaIII CATG 1 cut(s) 282
NlaIV GGNNCC 2 cut(s) 44, 248
NspI RCATGY 1 cut(s) 282
PkrI GCNGC 1 cut(s) 184
Psp1406I AACGTT 1 cut(s) 62
PspN4I GGNNCC 2 cut(s) 44, 248
SaqAI TTAA 4 cut(s) 15, 54, 105, 165
SatI GCNGC 1 cut(s) 183
Sau3AI GATC 1 cut(s) 234
SetI ASST 8 cut(s) 9, 48, 65, 88, 105, 174, 230, 260
SfaNI GCATC 1 cut(s) 169
SgeI CNNG 9 cut(s) 32, 149, 168, 173, 185, 250, 262, 291, 295
Sse9I AATT 2 cut(s) 265, 295
SspMI CTAG 1 cut(s) 156
TaiI ACGT 1 cut(s) 65
TasI AATT 2 cut(s) 265, 295
Tru1I TTAA 4 cut(s) 15, 54, 105, 165
Tru9I TTAA 4 cut(s) 15, 54, 105, 165
TscAI CASTG 1 cut(s) 248
TseI GCWGC 1 cut(s) 182
TspDTI ATGAA 2 cut(s) 17, 39
TspRI CASTG 1 cut(s) 248
XceI RCATGY 1 cut(s) 282
XspI CTAG 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.