RLG00000015912

Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0002341
Physical Location & Seq
Reverse (-)
2389774 .. 2391900
2127 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015912

Sequence Viewer

Length: 1380 bp
ATGGAAGCGGCGGACGTCGCCAACGGATTTCGGCCTCGTGATGTACCCGAGAGACTGATTCCTTTTATTGCAATGTACGGGAAAGATGACTGCCTTAGCTTATTGAAAGATCCTGAACAACCTGAAGAAGAAAAATCTAAAGACGTACTCATACATGATAAGGCTCCACAGCTTTTTGAATCAATTATCAAGTCACTCCAAGCTGCAGAGTCAGAGAGGGAGGTTGAGGATATCAACAGCAAGTTTAACTTGCATTTCCCTGCAACTGAGGGTCGGGCTACTATTGTTATCAGTAGTGATCCAGGTGTCAGTAGAGCTAAAAACTCGTTACTTACGGAATATGGAAGGGCTTTGTTCAATAAAGTCTCTGTGGCACCGCCATATCAACGGAATGAAACTGCACCACCCAGGGTCATGGCTTGCTGTTGGGGCCCTGGGGACCCTGCAGCAACTTTAGTGATGTTAGATTCACGTGGGGAGATTCTAGATGTACTTTGCACCGGGCCTCTCAGCTGGGAGTCTCTTACCTGGACCATACCCTTCTCTGATGAAGCTACTCAACTGCGTATGAATTGTGATCAAGAACGTATTTTGAAGTTTGTGACTGATCACCAACCTGATGTCGCTATCATAGGAGGGGCTAATATGTCTTGTCCTCTCCTGAGAGAACAACTGCTTTGGGTGAGACTTTACTGTATTGAGAAGTCATTGGTAAAATCTGGTAAAGTATCTACTCGAAAAGAGTTTGCAACATTACATGGGATGGGTGCATGGGTGTATGTTAATGCAGTTGGTTTCTTGCGTGTGCGGCTGAGTGGGATGCTTACTGCTAGCAGCATCAGCAGCCAATTTTTTGCTCTGTCGGATGATACAAGAATACATCCAGATTTATACTGTTTTGCAGAACAAATGGCCCAAGATGTTTGTGGTGACATGGTTGTTCTGGTGCAGAGCATTAGGGATCTACCTAGTTACCTCAAGAAGCTTGACATTGAAGCATATACTAGAAGCAAAGGATTGCATTATATGATGCAAACATTGTGCTGTATAAGGGAAGAGTTAATACAAGGGTTCCAAGAGTGGCGTAAAAAATATGAAGAACTAAGTGATGATGACATGTTCTATATGATGACCGGTGAAACTCGCGACACCCTCTCGGAAGGAAGCATTGTGCAGGCCACAATTCGCAGGGTGCTTTCCAAAACAGCAATTTGTACTGTGGGAGCTGTGTTGATTTGTTTGCTCTGGAGAGACGACTTTAAAGTTGATGGGAGGGAAATTTCAGACTTATCACAAGTAATGAAGGTGGGTGACACTATCACTTGCAAGATCAAATCTCTTCGAAAGAAGCAATGGGATGTGAAACTCAGTAGTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000018 GO:0000785 GO:0000988 GO:0000990 GO:0000991 GO:0002637 GO:0002682 GO:0002694 GO:0002697 GO:0002700 GO:0002703 GO:0002706 GO:0002712 GO:0002819 GO:0002822 GO:0002889 GO:0003006 GO:0003674 GO:0003682 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006325 GO:0006338 GO:0006342 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009299 GO:0009506 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010154 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010639 GO:0010793 GO:0016043 GO:0016070 GO:0016071 GO:0016458 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0030054 GO:0031056 GO:0031057 GO:0031060 GO:0031061 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031491 GO:0031974 GO:0031981 GO:0032239 GO:0032268 GO:0032269 GO:0032386 GO:0032501 GO:0032502 GO:0032774 GO:0032784 GO:0032786 GO:0032879 GO:0032880 GO:0032968 GO:0032991 GO:0033043 GO:0033044 GO:0033157 GO:0034243 GO:0034641 GO:0034645 GO:0034654 GO:0034728 GO:0035327 GO:0040029 GO:0042393 GO:0042789 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0043954 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045191 GO:0045595 GO:0045814 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0046822 GO:0046825 GO:0046831 GO:0048316 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050684 GO:0050776 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0051049 GO:0051052 GO:0051128 GO:0051129 GO:0051147 GO:0051171 GO:0051172 GO:0051173 GO:0051223 GO:0051239 GO:0051246 GO:0051248 GO:0051249 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0055044 GO:0060255 GO:0060341 GO:0061085 GO:0061086 GO:0061458 GO:0065007 GO:0070013 GO:0070201 GO:0070827 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090087 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902275 GO:1902679 GO:1902680 GO:1903311 GO:1903506 GO:1903507 GO:1903508 GO:1903827 GO:1905268 GO:2000026 GO:2000112 GO:2000113 GO:2000197 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DLD HHH_7 HTH_44 SH2_2 SPT6_acidic YqgF

Protein Analysis

460

Amino Acids

51.78

Weight (kDa)

5.42

Isoelectric Point (pI)

41.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Spt6_S1 PF21710 373 - 457 1.1e-10 Spt6, S1/OB domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 18
AccB1I GGYRCC 1 cut(s) 373
AccII CGCG 1 cut(s) 1146
AciI CCGC 4 cut(s) 8, 11, 377, 808
AclWI GGATC 3 cut(s) 104, 293, 969
AcsI RAATTY 1 cut(s) 1278
AcuI CTGAAG 1 cut(s) 144
AcvI CACGTG 1 cut(s) 473
AcyI GRCGYC 1 cut(s) 15
AfaI GTAC 5 cut(s) 45, 77, 147, 492, 1216
AflIII ACRYGT 1 cut(s) 1116
AgeI ACCGGT 1 cut(s) 1133
AgsI TTSAA 5 cut(s) 106, 179, 358, 595, 995
AjnI CCWGG 4 cut(s) 301, 407, 433, 527
AluBI AGCT 8 cut(s) 99, 172, 203, 317, 513, 554, 985, 1226
AluI AGCT 8 cut(s) 99, 172, 203, 317, 513, 554, 985, 1226
Alw26I GTCTC 5 cut(s) 46, 370, 525, 679, 1245
AlwI GGATC 3 cut(s) 104, 293, 969
Ama87I CYCGRG 1 cut(s) 47
AoxI GGCC 5 cut(s) 32, 430, 503, 912, 1176
ApaI GGGCCC 1 cut(s) 434
ApeKI GCWGC 4 cut(s) 203, 446, 834, 843
ApoI RAATTY 1 cut(s) 1278
AsiGI ACCGGT 1 cut(s) 1133
AspS9I GGNCC 6 cut(s) 430, 431, 439, 503, 531, 913
AsuC2I CCSGG 1 cut(s) 502
AsuHPI GGTGA 5 cut(s) 602, 694, 941, 1148, 1322
AsuII TTCGAA 1 cut(s) 1342
AsuNHI GCTAGC 1 cut(s) 830
AvaI CYCGRG 1 cut(s) 47
AvaII GGWCC 2 cut(s) 439, 531
BaeGI GKGCMC 1 cut(s) 434
BanI GGYRCC 1 cut(s) 373
BanII GRGCYC 1 cut(s) 434
BarI GAAGNNNNNNTAC 2 cut(s) 1047, 1079
BauI CACGAG 1 cut(s) 36
BbrPI CACGTG 1 cut(s) 473
BbvI GCAGC 4 cut(s) 190, 458, 846, 855
BccI CCATC 2 cut(s) 757, 1262
BciT130I CCWGG 4 cut(s) 303, 409, 435, 529
BclI TGATCA 2 cut(s) 577, 607
BcnI CCSGG 1 cut(s) 502
BcoDI GTCTC 5 cut(s) 46, 370, 525, 679, 1245
BfaI CTAG 5 cut(s) 485, 831, 969, 1005, 1378
BfmI CTRYAG 2 cut(s) 204, 444
BisI GCNGC 6 cut(s) 9, 204, 447, 809, 835, 844
BlsI GCNGC 6 cut(s) 10, 205, 448, 810, 836, 845
Bme1390I CCNGG 5 cut(s) 303, 409, 435, 502, 529
Bme18I GGWCC 2 cut(s) 439, 531
BmeT110I CYCGRG 1 cut(s) 47
BmgT120I GGNCC 6 cut(s) 430, 431, 439, 503, 531, 913
BmiI GGNNCC 7 cut(s) 165, 375, 431, 432, 440, 441, 1073
BmrFI CCNGG 5 cut(s) 303, 409, 435, 502, 529
BmsI GCATC 3 cut(s) 810, 846, 1020
BmtI GCTAGC 1 cut(s) 834
BpmI CTGGAG 1 cut(s) 1267
Bpu10I CCTNAGC 1 cut(s) 95
Bpu14I TTCGAA 1 cut(s) 1342
BpuEI CTTGAG 1 cut(s) 962
BpuMI CCSGG 1 cut(s) 502
BsaAI YACGTR 1 cut(s) 473
BsaHI GRCGYC 1 cut(s) 15
BsaJI CCNNGG 4 cut(s) 407, 408, 433, 434
BsaWI WCCGGW 1 cut(s) 1133
Bse118I RCCGGY 1 cut(s) 1133
Bse3DI GCAATG 2 cut(s) 78, 1358
BseBI CCWGG 4 cut(s) 303, 409, 435, 529
BseDI CCNNGG 4 cut(s) 407, 408, 433, 434
BseGI GGATG 5 cut(s) 768, 825, 871, 880, 1363
BseMI GCAATG 2 cut(s) 78, 1358
BseMII CTCAG 4 cut(s) 258, 523, 653, 803
BseSI GKGCMC 1 cut(s) 434
BseXI GCAGC 4 cut(s) 190, 458, 846, 855
BseYI CCCAGC 1 cut(s) 513
BsgI GTGCAG 3 cut(s) 384, 968, 1193
Bsh1236I CGCG 1 cut(s) 1146
BshFI GGCC 5 cut(s) 34, 432, 505, 914, 1178
BshNI GGYRCC 1 cut(s) 373
BshTI ACCGGT 1 cut(s) 1133
BsiHKCI CYCGRG 1 cut(s) 47
BsiSI CCGG 2 cut(s) 501, 1134
BslFI GGGAC 1 cut(s) 452
BsmAI GTCTC 5 cut(s) 46, 370, 525, 679, 1245
BsmBI CGTCTC 1 cut(s) 1245
BsmFI GGGAC 1 cut(s) 452
BsnI GGCC 5 cut(s) 34, 432, 505, 914, 1178
BsoBI CYCGRG 1 cut(s) 47
Bsp119I TTCGAA 1 cut(s) 1342
Bsp120I GGGCCC 1 cut(s) 430
Bsp1286I GDGCHC 1 cut(s) 434
Bsp143I GATC 6 cut(s) 109, 298, 577, 607, 961, 1329
Bsp68I TCGCGA 1 cut(s) 1146
BspACI CCGC 4 cut(s) 8, 11, 377, 808
BspANI GGCC 5 cut(s) 34, 432, 505, 914, 1178
BspCNI CTCAG 5 cut(s) 259, 522, 654, 804, 1380
BspFNI CGCG 1 cut(s) 1146
BspLI GGNNCC 7 cut(s) 165, 375, 431, 432, 440, 441, 1073
BspMAI CTGCAG 2 cut(s) 208, 448
BspOI GCTAGC 1 cut(s) 834
BspPI GGATC 3 cut(s) 104, 293, 969
BspT104I TTCGAA 1 cut(s) 1342
BspT107I GGYRCC 1 cut(s) 373
BsrDI GCAATG 2 cut(s) 78, 1358
BsrFI RCCGGY 1 cut(s) 1133
BssAI RCCGGY 1 cut(s) 1133
BssECI CCNNGG 4 cut(s) 407, 408, 433, 434
BssMI GATC 6 cut(s) 109, 298, 577, 607, 961, 1329
BssNI GRCGYC 1 cut(s) 15
BssSI CACGAG 1 cut(s) 36
Bst2BI CACGAG 1 cut(s) 36
Bst2UI CCWGG 4 cut(s) 303, 409, 435, 529
Bst4CI ACNGT 3 cut(s) 695, 896, 1219
Bst6I CTCTTC 2 cut(s) 1050, 1344
BstACI GRCGYC 1 cut(s) 15
BstBAI YACGTR 1 cut(s) 473
BstBI TTCGAA 1 cut(s) 1342
BstC8I GCNNGC 3 cut(s) 421, 832, 1176
BstDEI CTNAG 7 cut(s) 95, 267, 509, 662, 812, 1103, 1367
BstF5I GGATG 5 cut(s) 768, 825, 871, 880, 1363
BstFNI CGCG 1 cut(s) 1146
BstKTI GATC 6 cut(s) 112, 301, 580, 610, 964, 1332
BstMAI GTCTC 5 cut(s) 46, 370, 525, 679, 1245
BstMBI GATC 6 cut(s) 109, 298, 577, 607, 961, 1329
BstMWI GCNNNNNNNGC 5 cut(s) 17, 429, 808, 840, 843
BstNI CCWGG 4 cut(s) 303, 409, 435, 529
BstNSI RCATGY 1 cut(s) 1120
BstSCI CCNGG 5 cut(s) 301, 407, 433, 500, 527
BstSFI CTRYAG 2 cut(s) 204, 444
BstSLI GKGCMC 1 cut(s) 434
BstUI CGCG 1 cut(s) 1146
BstV1I GCAGC 4 cut(s) 190, 458, 846, 855
BstX2I RGATCY 2 cut(s) 109, 961
BstXI CCANNNNNNTGG 1 cut(s) 415
BstYI RGATCY 2 cut(s) 109, 961
BsuRI GGCC 5 cut(s) 34, 432, 505, 914, 1178
BtsCI GGATG 5 cut(s) 768, 825, 871, 880, 1363
BtuMI TCGCGA 1 cut(s) 1146
Cac8I GCNNGC 3 cut(s) 421, 832, 1176
Cfr10I RCCGGY 1 cut(s) 1133
Cfr13I GGNCC 6 cut(s) 430, 431, 439, 503, 531, 913
Csp6I GTAC 5 cut(s) 44, 76, 146, 491, 1215
CspAI ACCGGT 1 cut(s) 1133
CviAII CATG 6 cut(s) 155, 415, 758, 771, 934, 1117
CviQI GTAC 5 cut(s) 44, 76, 146, 491, 1215
DdeI CTNAG 7 cut(s) 95, 267, 509, 662, 812, 1103, 1367
DpnI GATC 6 cut(s) 111, 300, 579, 609, 963, 1331
DpnII GATC 6 cut(s) 109, 298, 577, 607, 961, 1329
DraI TTTAAA 1 cut(s) 1261
Eam1104I CTCTTC 2 cut(s) 1050, 1344
EarI CTCTTC 2 cut(s) 1050, 1344
EciI GGCGGA 1 cut(s) 26
Eco24I GRGCYC 1 cut(s) 434
Eco32I GATATC 1 cut(s) 232
Eco47I GGWCC 2 cut(s) 439, 531
Eco57I CTGAAG 1 cut(s) 144
Eco72I CACGTG 1 cut(s) 473
Eco88I CYCGRG 1 cut(s) 47
EcoO109I RGGNCCY 3 cut(s) 430, 431, 439
EcoRII CCWGG 4 cut(s) 301, 407, 433, 527
EcoRV GATATC 1 cut(s) 232
EcoT38I GRGCYC 1 cut(s) 434
Esp3I CGTCTC 1 cut(s) 1245
FaeI CATG 6 cut(s) 158, 418, 761, 774, 937, 1120
FalI AAGNNNNNCTT 2 cut(s) 233, 265
FaqI GGGAC 1 cut(s) 452
FatI CATG 6 cut(s) 154, 414, 757, 770, 933, 1116
FbaI TGATCA 2 cut(s) 577, 607
Fnu4HI GCNGC 6 cut(s) 9, 204, 447, 809, 835, 844
FokI GGATG 5 cut(s) 775, 832, 867, 878, 1370
FriOI GRGCYC 1 cut(s) 434
Fsp4HI GCNGC 6 cut(s) 9, 204, 447, 809, 835, 844
FspBI CTAG 5 cut(s) 485, 831, 969, 1005, 1378
GluI GCNGC 6 cut(s) 9, 204, 447, 809, 835, 844
GsaI CCCAGC 1 cut(s) 517
GsuI CTGGAG 1 cut(s) 1267
HaeIII GGCC 5 cut(s) 34, 432, 505, 914, 1178
HapII CCGG 2 cut(s) 501, 1134
Hin1I GRCGYC 1 cut(s) 15
Hin1II CATG 6 cut(s) 158, 418, 761, 774, 937, 1120
HindIII AAGCTT 1 cut(s) 983
HinfI GANTC 6 cut(s) 58, 179, 209, 467, 481, 518
HpaII CCGG 2 cut(s) 501, 1134
HphI GGTGA 5 cut(s) 602, 694, 941, 1148, 1322
Hpy188I TCNGA 5 cut(s) 214, 547, 865, 1159, 1285
Hpy188III TCNNGA 9 cut(s) 38, 113, 485, 581, 661, 884, 979, 1145, 1246
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 4 cut(s) 339, 550, 1154, 1297
HpyCH4III ACNGT 3 cut(s) 695, 896, 1219
HpyCH4IV ACGT 4 cut(s) 15, 144, 472, 586
HpyF10VI GCNNNNNNNGC 5 cut(s) 17, 429, 808, 840, 843
HpyF3I CTNAG 7 cut(s) 95, 267, 509, 662, 812, 1103, 1367
HpySE526I ACGT 4 cut(s) 15, 144, 472, 586
Hsp92I GRCGYC 1 cut(s) 15
Hsp92II CATG 6 cut(s) 158, 418, 761, 774, 937, 1120
KflI GGGWCCC 1 cut(s) 439
Ksp22I TGATCA 2 cut(s) 577, 607
Kzo9I GATC 6 cut(s) 109, 298, 577, 607, 961, 1329
LmnI GCTCC 2 cut(s) 169, 1223
Lsp1109I GCAGC 4 cut(s) 190, 458, 846, 855
LweI GCATC 3 cut(s) 810, 846, 1020
MaeI CTAG 5 cut(s) 485, 831, 969, 1005, 1378
MaeII ACGT 4 cut(s) 15, 144, 472, 586
MaeIII GTNAC 6 cut(s) 192, 327, 601, 929, 971, 1310
MalI GATC 6 cut(s) 111, 300, 579, 609, 963, 1331
MboI GATC 6 cut(s) 109, 298, 577, 607, 961, 1329
MboII GAAGA 5 cut(s) 137, 140, 1067, 1109, 1331
MflI RGATCY 2 cut(s) 109, 961
MhlI GDGCHC 1 cut(s) 434
MluCI AATT 6 cut(s) 183, 571, 848, 1182, 1209, 1278
MlyI GAGTC 2 cut(s) 218, 527
MmeI TCCRAC 1 cut(s) 843
MseI TTAA 4 cut(s) 246, 783, 1061, 1260
MspA1I CMGCKG 1 cut(s) 513
MspI CCGG 2 cut(s) 501, 1134
MspR9I CCNGG 5 cut(s) 303, 409, 435, 502, 529
MvaI CCWGG 4 cut(s) 303, 409, 435, 529
MvnI CGCG 1 cut(s) 1146
MwoI GCNNNNNNNGC 5 cut(s) 17, 429, 808, 840, 843
NciI CCSGG 1 cut(s) 502
NdeII GATC 6 cut(s) 109, 298, 577, 607, 961, 1329
NheI GCTAGC 1 cut(s) 830
NlaIII CATG 6 cut(s) 158, 418, 761, 774, 937, 1120
NlaIV GGNNCC 7 cut(s) 165, 375, 431, 432, 440, 441, 1073
NmuCI GTSAC 4 cut(s) 192, 601, 929, 1310
NruI TCGCGA 1 cut(s) 1146
NspI RCATGY 1 cut(s) 1120
NspV TTCGAA 1 cut(s) 1342
PasI CCCWGGG 2 cut(s) 408, 434
PciI ACATGT 1 cut(s) 1116
PfeI GAWTC 4 cut(s) 58, 179, 467, 481
PinAI ACCGGT 1 cut(s) 1133
PkrI GCNGC 6 cut(s) 10, 205, 448, 810, 836, 845
PleI GAGTC 2 cut(s) 217, 526
PmaCI CACGTG 1 cut(s) 473
PmlI CACGTG 1 cut(s) 473
PpsI GAGTC 2 cut(s) 217, 526
Ppu21I YACGTR 1 cut(s) 473
PpuMI RGGWCCY 1 cut(s) 439
PscI ACATGT 1 cut(s) 1116
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 4 cut(s) 301, 407, 433, 527
PspCI CACGTG 1 cut(s) 473
PspFI CCCAGC 1 cut(s) 513
PspGI CCWGG 4 cut(s) 301, 407, 433, 527
PspN4I GGNNCC 7 cut(s) 165, 375, 431, 432, 440, 441, 1073
PspOMI GGGCCC 1 cut(s) 430
PspPI GGNCC 6 cut(s) 430, 431, 439, 503, 531, 913
PspPPI RGGWCCY 1 cut(s) 439
PstI CTGCAG 2 cut(s) 208, 448
PsuI RGATCY 2 cut(s) 109, 961
PvuII CAGCTG 1 cut(s) 513
RruI TCGCGA 1 cut(s) 1146
RsaI GTAC 5 cut(s) 45, 77, 147, 492, 1216
RsaNI GTAC 5 cut(s) 44, 76, 146, 491, 1215
SaqAI TTAA 4 cut(s) 246, 783, 1061, 1260
SatI GCNGC 6 cut(s) 9, 204, 447, 809, 835, 844
Sau3AI GATC 6 cut(s) 109, 298, 577, 607, 961, 1329
Sau96I GGNCC 6 cut(s) 430, 431, 439, 503, 531, 913
SchI GAGTC 2 cut(s) 218, 527
ScrFI CCNGG 5 cut(s) 303, 409, 435, 502, 529
SduI GDGCHC 1 cut(s) 434
SfaNI GCATC 3 cut(s) 810, 846, 1020
SfcI CTRYAG 2 cut(s) 204, 444
SfuI TTCGAA 1 cut(s) 1342
SinI GGWCC 2 cut(s) 439, 531
SmlI CTYRAG 1 cut(s) 977
SmoI CTYRAG 1 cut(s) 977
Sse9I AATT 6 cut(s) 183, 571, 848, 1182, 1209, 1278
SsiI CCGC 4 cut(s) 8, 11, 377, 808
SspMI CTAG 5 cut(s) 485, 831, 969, 1005, 1378
StyD4I CCNGG 5 cut(s) 301, 407, 433, 500, 527
TaaI ACNGT 3 cut(s) 695, 896, 1219
TaiI ACGT 4 cut(s) 18, 147, 475, 589
TaqI TCGA 2 cut(s) 736, 1342
TasI AATT 6 cut(s) 183, 571, 848, 1182, 1209, 1278
TatI WGTACW 2 cut(s) 490, 1214
TauI GCSGC 2 cut(s) 11, 811
TfiI GAWTC 4 cut(s) 58, 179, 467, 481
Tru1I TTAA 4 cut(s) 246, 783, 1061, 1260
Tru9I TTAA 4 cut(s) 246, 783, 1061, 1260
TseFI GTSAC 4 cut(s) 192, 601, 929, 1310
TseI GCWGC 4 cut(s) 203, 446, 834, 843
Tsp45I GTSAC 4 cut(s) 192, 601, 929, 1310
TspDTI ATGAA 5 cut(s) 408, 564, 584, 1110, 1316
TspGWI ACGGA 3 cut(s) 39, 350, 403
VpaK11BI GGWCC 2 cut(s) 439, 531
XapI RAATTY 1 cut(s) 1278
XbaI TCTAGA 1 cut(s) 484
XceI RCATGY 1 cut(s) 1120
XcmI CCANNNNNNNNNTGG 1 cut(s) 923
XspI CTAG 5 cut(s) 485, 831, 969, 1005, 1378
ZraI GACGTC 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.