Rh2AG034500

Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0002341
Physical Location & Seq
Reverse (-)
2525924 .. 2529272
3349 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG034500.1

Sequence Viewer

Length: 1830 bp
ATGTACTTGAAAGAGGACTGCCTTAGCTTATTGAAAGATCATCCTGAACAACCTGAAGAAGAAAAATCTAAAGTGAAGTGGTACAGGATTCTGTGGGCCGCTCGGGAATTGCACAAAAATTGGTTGCTGTTTCAGAATCAGAAAAGGGCTTTGCGATTTTCCTACAATAAGCGCTTTGAGGAAGAATCTCGACTAGGACTCATACATGATAAGGCGGCTCCACAGCTTTTTGAATCAATTATCAACTCACTCCAAGCTGCAGAGTCACAGAGGGAGGTTGAGGATATCAACAGCAAGTTTAACTTGCATTTCCCTGCAACTGAGGGTCCGGCTACTGTTGTTATCTGTAGTGATCCAGGTGTCAGTAGAGCTAAAGACTTGTTACTTACGGAATATGGAAGGGCTTTGTTCAATAAAGTCTCTGTGGCACCGCCATATCAACGGAATGAAACTGCACCACCCAGGGTCATGGCTTGCTGTTGGGGCCCTGGGGAACCTGCAACAACTTTAGTGATGTTAGATTCATGTGGGGAGATTCTAGATGTACTTTGCACCGGGCCTCTCAGCTGGGAGTCTCTTACCTGGACCATACCCTTCTTTGATGAAGCTACTCAACAGCGTATGAATTGTGATCAAGAACGTATTTTGAAGTTTGTGACTGATCACCAACCTGATGTCACCATCATAGAAGCGGCTAATATGTCTTGTCCTCTCCTGAGAGAACAACTGCTTTGGGTGAGTGATACAATGATGATGAAACCTAACAGTAGAGCAAGCCCCCTAAGGATTGTGTATGGGGATGAATCTCTGGCTCGCCTATATGAGAATTCTGAGATTTCATCGGAGCAGTTACCTGGACAATCAGGCATTGCCAGGCGGGCTGTGGCTCTAGGGCGTTATCTTCAAAATCCATTGGCAATGGTTGCCACATTGTGTGGAGCTGGAAGAGAAATCCTATCTTGGAAACTACTCAATTCTCCTGATGAGAACTATCTCAACCCGGACGAGAAGTATGCAGTGATTGAACAGGTCATGATAGATGTGACAAACCAGGTTGGCCTAGACATAAATTTGGCCATAAACCATGAATGGTTATTTGCACCTTTGCAATTTATTTCTGGGCTTGGACCTCAAATGGCAGCATCTCTGAAGAAGTCATTGGTAAAATCTGGTAAAGTATCTACTCGAAACGAGTTTGCAACATTACATGGGATGGGTGCATGGGTGTATGTTAATGCAGTTGGTTTCTTGCGTGTGAGGCTGAGTGGGATGCTTGCTGCTAGCAGCATCAGCAGCCAATTTTTTGCTCTGTTGGATGATACAAGAATACATCCAGATTTATACTGTTTTGCAGAACAAATGGCCCGAGATGTTTATGGTGACATGGATGTTCTGGTGCAGAGCATTAGGGATCTACCTAGTTACCTGGAGAAGCTTGACATCGAAGCATATGCTAGAAGCAGAGGATTGCATTATATGATGCAAACATTGTGCTGTATAAGGGAAGAGTTAATACAAGGGTTCCAAGAGTGGCGTAAAAAATATGAAGAACTAAGTGATGATGACATGTTCTATATGATGACCGGTGAAACTCGCGACACCCTCTCGGAAGGAAGCATTGTGCAGGCCACAATTCGCAGGGTGCTTTCCAAAACAGCAATTTGTACTGTGGGAGCTGGGTTGATTTGTTTGCTCTGGAGAGATGACTTTAAAGTTGATGGGAGGGAAATTTCAGACTTATCACAAGTAATGAAGGTGGGTGACACTATCACTTGCAAGATCAAATCTCTTCGAAAGAAGCAATGGGATGTGAAACTCTGTAGTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000018 GO:0000785 GO:0000988 GO:0000990 GO:0000991 GO:0002637 GO:0002682 GO:0002694 GO:0002697 GO:0002700 GO:0002703 GO:0002706 GO:0002712 GO:0002819 GO:0002822 GO:0002889 GO:0003006 GO:0003674 GO:0003682 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006325 GO:0006338 GO:0006342 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009299 GO:0009506 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010154 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010639 GO:0010793 GO:0016043 GO:0016070 GO:0016071 GO:0016458 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0030054 GO:0031056 GO:0031057 GO:0031060 GO:0031061 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031491 GO:0031974 GO:0031981 GO:0032239 GO:0032268 GO:0032269 GO:0032386 GO:0032501 GO:0032502 GO:0032774 GO:0032784 GO:0032786 GO:0032879 GO:0032880 GO:0032968 GO:0032991 GO:0033043 GO:0033044 GO:0033157 GO:0034243 GO:0034641 GO:0034645 GO:0034654 GO:0034728 GO:0035327 GO:0040029 GO:0042393 GO:0042789 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0043954 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045191 GO:0045595 GO:0045814 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0046822 GO:0046825 GO:0046831 GO:0048316 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050684 GO:0050776 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0051049 GO:0051052 GO:0051128 GO:0051129 GO:0051147 GO:0051171 GO:0051172 GO:0051173 GO:0051223 GO:0051239 GO:0051246 GO:0051248 GO:0051249 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0055044 GO:0060255 GO:0060341 GO:0061085 GO:0061086 GO:0061458 GO:0065007 GO:0070013 GO:0070201 GO:0070827 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090087 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902275 GO:1902679 GO:1902680 GO:1903311 GO:1903506 GO:1903507 GO:1903508 GO:1903827 GO:1905268 GO:2000026 GO:2000112 GO:2000113 GO:2000197 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DLD HHH_7 HTH_44 SH2_2 SPT6_acidic YqgF

Protein Analysis

609

Amino Acids

69.16

Weight (kDa)

5.47

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YqgF PF14639 154 - 312 7.4e-15 Holliday-junction resolvase-like of SPT6
HHH_7 PF14635 318 - 419 2.1e-14 Helix-hairpin-helix motif
Spt6_S1 PF21710 523 - 605 1.4e-10 Spt6, S1/OB domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 505
AccB1I GGYRCC 1 cut(s) 427
AccBSI CCGCTC 1 cut(s) 101
AccII CGCG 1 cut(s) 1596
AciI CCGC 5 cut(s) 99, 215, 431, 692, 877
AclWI GGATC 2 cut(s) 347, 1419
AcoI YGGCCR 1 cut(s) 1074
AcsI RAATTY 3 cut(s) 826, 1069, 1728
AcuI CTGAAG 2 cut(s) 75, 1169
AdeI CACNNNGTG 1 cut(s) 933
AfaI GTAC 4 cut(s) 5, 83, 546, 1666
AfeI AGCGCT 1 cut(s) 173
AflIII ACRYGT 1 cut(s) 1566
AgeI ACCGGT 1 cut(s) 1583
AgsI TTSAA 7 cut(s) 10, 34, 233, 412, 649, 905, 1025
AjnI CCWGG 8 cut(s) 355, 461, 487, 581, 853, 872, 1050, 1425
AjuI GAANNNNNNNTTGG 2 cut(s) 1142, 1174
AluBI AGCT 9 cut(s) 27, 226, 257, 371, 567, 608, 941, 1435, 1676
AluI AGCT 9 cut(s) 27, 226, 257, 371, 567, 608, 941, 1435, 1676
Alw26I GTCTC 2 cut(s) 424, 579
AlwI GGATC 2 cut(s) 347, 1419
Ama87I CYCGRG 2 cut(s) 102, 1365
Aor51HI AGCGCT 1 cut(s) 173
AoxI GGCC 7 cut(s) 96, 484, 557, 1057, 1074, 1362, 1626
ApaI GGGCCC 1 cut(s) 488
ApeKI GCWGC 5 cut(s) 257, 1139, 1277, 1284, 1293
ApoI RAATTY 3 cut(s) 826, 1069, 1728
AsiGI ACCGGT 1 cut(s) 1583
AspLEI GCGC 1 cut(s) 174
AspS9I GGNCC 8 cut(s) 96, 326, 484, 485, 557, 585, 1127, 1363
AsuC2I CCSGG 2 cut(s) 556, 1001
AsuHPI GGTGA 6 cut(s) 656, 670, 748, 1391, 1598, 1772
AsuII TTCGAA 1 cut(s) 1792
AsuNHI GCTAGC 1 cut(s) 1280
AvaI CYCGRG 2 cut(s) 102, 1365
AvaII GGWCC 3 cut(s) 326, 585, 1127
AxyI CCTNAGG 1 cut(s) 782
BaeGI GKGCMC 1 cut(s) 488
BalI TGGCCA 1 cut(s) 1076
BanI GGYRCC 1 cut(s) 427
BanII GRGCYC 1 cut(s) 488
BarI GAAGNNNNNNTAC 2 cut(s) 1497, 1529
BbvI GCAGC 5 cut(s) 244, 1151, 1264, 1296, 1305
BccI CCATC 3 cut(s) 689, 1207, 1712
BcgI CGANNNNNNTGC 4 cut(s) 995, 1029, 1433, 1467
BciT130I CCWGG 8 cut(s) 357, 463, 489, 583, 855, 874, 1052, 1427
BclI TGATCA 2 cut(s) 631, 661
BcnI CCSGG 2 cut(s) 556, 1001
BcoDI GTCTC 2 cut(s) 424, 579
BfaI CTAG 8 cut(s) 194, 539, 890, 1061, 1281, 1419, 1455, 1828
BfmI CTRYAG 3 cut(s) 258, 346, 1819
BfoI RGCGCY 1 cut(s) 175
BfuAI ACCTGC 1 cut(s) 505
BglI GCCNNNNNGGC 1 cut(s) 878
BisI GCNGC 8 cut(s) 99, 216, 258, 693, 1140, 1278, 1285, 1294
BlsI GCNGC 8 cut(s) 100, 217, 259, 694, 1141, 1279, 1286, 1295
Bme18I GGWCC 3 cut(s) 326, 585, 1127
BmeT110I CYCGRG 2 cut(s) 102, 1365
BmgT120I GGNCC 8 cut(s) 96, 326, 484, 485, 557, 585, 1127, 1363
BmiI GGNNCC 7 cut(s) 219, 327, 429, 485, 486, 495, 1523
BmsI GCATC 4 cut(s) 1151, 1260, 1296, 1470
BmtI GCTAGC 1 cut(s) 1284
BpmI CTGGAG 2 cut(s) 1448, 1717
Bpu10I CCTNAGC 1 cut(s) 23
Bpu14I TTCGAA 1 cut(s) 1792
BpuMI CCSGG 2 cut(s) 556, 1001
BsaJI CCNNGG 4 cut(s) 461, 462, 487, 488
BsaWI WCCGGW 1 cut(s) 1583
Bse118I RCCGGY 1 cut(s) 1583
Bse21I CCTNAGG 1 cut(s) 782
Bse3DI GCAATG 3 cut(s) 867, 924, 1808
BseBI CCWGG 8 cut(s) 357, 463, 489, 583, 855, 874, 1052, 1427
BseDI CCNNGG 4 cut(s) 461, 462, 487, 488
BseGI GGATG 8 cut(s) 40, 805, 1218, 1275, 1321, 1330, 1393, 1813
BseMI GCAATG 3 cut(s) 867, 924, 1808
BseMII CTCAG 5 cut(s) 312, 577, 707, 822, 1253
BseSI GKGCMC 1 cut(s) 488
BseXI GCAGC 5 cut(s) 244, 1151, 1264, 1296, 1305
BseYI CCCAGC 2 cut(s) 567, 1676
BsgI GTGCAG 3 cut(s) 438, 1418, 1643
Bsh1236I CGCG 1 cut(s) 1596
BshFI GGCC 7 cut(s) 98, 486, 559, 1059, 1076, 1364, 1628
BshNI GGYRCC 1 cut(s) 427
BshTI ACCGGT 1 cut(s) 1583
BsiHKCI CYCGRG 2 cut(s) 102, 1365
BsiSI CCGG 4 cut(s) 329, 555, 1001, 1584
BsmAI GTCTC 2 cut(s) 424, 579
BsnI GGCC 7 cut(s) 98, 486, 559, 1059, 1076, 1364, 1628
BsoBI CYCGRG 2 cut(s) 102, 1365
Bsp119I TTCGAA 1 cut(s) 1792
Bsp120I GGGCCC 1 cut(s) 484
Bsp1286I GDGCHC 1 cut(s) 488
Bsp143I GATC 6 cut(s) 37, 352, 631, 661, 1411, 1779
Bsp68I TCGCGA 1 cut(s) 1596
BspACI CCGC 5 cut(s) 99, 215, 431, 692, 877
BspANI GGCC 7 cut(s) 98, 486, 559, 1059, 1076, 1364, 1628
BspCNI CTCAG 5 cut(s) 313, 576, 708, 823, 1254
BspFNI CGCG 1 cut(s) 1596
BspHI TCATGA 1 cut(s) 1032
BspLI GGNNCC 7 cut(s) 219, 327, 429, 485, 486, 495, 1523
BspMAI CTGCAG 1 cut(s) 262
BspMI ACCTGC 1 cut(s) 505
BspOI GCTAGC 1 cut(s) 1284
BspPI GGATC 2 cut(s) 347, 1419
BspT104I TTCGAA 1 cut(s) 1792
BspT107I GGYRCC 1 cut(s) 427
BsrBI CCGCTC 1 cut(s) 101
BsrDI GCAATG 3 cut(s) 867, 924, 1808
BsrFI RCCGGY 1 cut(s) 1583
BssAI RCCGGY 1 cut(s) 1583
BssECI CCNNGG 4 cut(s) 461, 462, 487, 488
BssMI GATC 6 cut(s) 37, 352, 631, 661, 1411, 1779
Bst2UI CCWGG 8 cut(s) 357, 463, 489, 583, 855, 874, 1052, 1427
Bst4CI ACNGT 4 cut(s) 337, 767, 1346, 1669
Bst6I CTCTTC 3 cut(s) 940, 1500, 1794
BstAPI GCANNNNNTGC 1 cut(s) 923
BstBI TTCGAA 1 cut(s) 1792
BstC8I GCNNGC 7 cut(s) 475, 775, 814, 879, 1275, 1282, 1626
BstDEI CTNAG 8 cut(s) 23, 321, 563, 716, 782, 831, 1262, 1553
BstF5I GGATG 8 cut(s) 40, 805, 1218, 1275, 1321, 1330, 1393, 1813
BstFNI CGCG 1 cut(s) 1596
BstH2I RGCGCY 1 cut(s) 175
BstHHI GCGC 1 cut(s) 174
BstKTI GATC 6 cut(s) 40, 355, 634, 664, 1414, 1782
BstMAI GTCTC 2 cut(s) 424, 579
BstMBI GATC 6 cut(s) 37, 352, 631, 661, 1411, 1779
BstMWI GCNNNNNNNGC 6 cut(s) 483, 878, 923, 1258, 1290, 1293
BstNI CCWGG 8 cut(s) 357, 463, 489, 583, 855, 874, 1052, 1427
BstNSI RCATGY 1 cut(s) 1570
BstSFI CTRYAG 3 cut(s) 258, 346, 1819
BstSLI GKGCMC 1 cut(s) 488
BstUI CGCG 1 cut(s) 1596
BstV1I GCAGC 5 cut(s) 244, 1151, 1264, 1296, 1305
BstX2I RGATCY 1 cut(s) 1411
BstXI CCANNNNNNTGG 1 cut(s) 469
BstYI RGATCY 1 cut(s) 1411
Bsu36I CCTNAGG 1 cut(s) 782
BsuRI GGCC 7 cut(s) 98, 486, 559, 1059, 1076, 1364, 1628
BtsCI GGATG 8 cut(s) 40, 805, 1218, 1275, 1321, 1330, 1393, 1813
BtsI GCAGTG 1 cut(s) 1023
BtsIMutI CAGTG 1 cut(s) 1023
BtuMI TCGCGA 1 cut(s) 1596
BveI ACCTGC 1 cut(s) 505
Cac8I GCNNGC 7 cut(s) 475, 775, 814, 879, 1275, 1282, 1626
CciI TCATGA 1 cut(s) 1032
CfoI GCGC 1 cut(s) 174
Cfr10I RCCGGY 1 cut(s) 1583
Cfr13I GGNCC 8 cut(s) 96, 326, 484, 485, 557, 585, 1127, 1363
CsiI ACCWGGT 1 cut(s) 1050
Csp6I GTAC 4 cut(s) 4, 82, 545, 1665
CspAI ACCGGT 1 cut(s) 1583
CviAII CATG 9 cut(s) 206, 469, 525, 1033, 1085, 1208, 1221, 1384, 1567
CviQI GTAC 4 cut(s) 4, 82, 545, 1665
DdeI CTNAG 8 cut(s) 23, 321, 563, 716, 782, 831, 1262, 1553
DpnI GATC 6 cut(s) 39, 354, 633, 663, 1413, 1781
DpnII GATC 6 cut(s) 37, 352, 631, 661, 1411, 1779
DraI TTTAAA 1 cut(s) 1711
DraIII CACNNNGTG 1 cut(s) 933
EaeI YGGCCR 1 cut(s) 1074
Eam1104I CTCTTC 3 cut(s) 940, 1500, 1794
EarI CTCTTC 3 cut(s) 940, 1500, 1794
Eco24I GRGCYC 1 cut(s) 488
Eco32I GATATC 1 cut(s) 286
Eco47I GGWCC 3 cut(s) 326, 585, 1127
Eco47III AGCGCT 1 cut(s) 173
Eco57I CTGAAG 2 cut(s) 75, 1169
Eco81I CCTNAGG 1 cut(s) 782
Eco88I CYCGRG 2 cut(s) 102, 1365
EcoO109I RGGNCCY 2 cut(s) 484, 485
EcoRI GAATTC 1 cut(s) 826
EcoRII CCWGG 8 cut(s) 355, 461, 487, 581, 853, 872, 1050, 1425
EcoRV GATATC 1 cut(s) 286
EcoT38I GRGCYC 1 cut(s) 488
FaeI CATG 9 cut(s) 209, 472, 528, 1036, 1088, 1211, 1224, 1387, 1570
FalI AAGNNNNNCTT 2 cut(s) 287, 319
FatI CATG 9 cut(s) 205, 468, 524, 1032, 1084, 1207, 1220, 1383, 1566
FauI CCCGC 1 cut(s) 870
FauNDI CATATG 1 cut(s) 1450
FbaI TGATCA 2 cut(s) 631, 661
Fnu4HI GCNGC 8 cut(s) 99, 216, 258, 693, 1140, 1278, 1285, 1294
FokI GGATG 8 cut(s) 27, 812, 1225, 1282, 1317, 1328, 1400, 1820
FriOI GRGCYC 1 cut(s) 488
Fsp4HI GCNGC 8 cut(s) 99, 216, 258, 693, 1140, 1278, 1285, 1294
FspBI CTAG 8 cut(s) 194, 539, 890, 1061, 1281, 1419, 1455, 1828
GlaI GCGC 1 cut(s) 173
GluI GCNGC 8 cut(s) 99, 216, 258, 693, 1140, 1278, 1285, 1294
GsaI CCCAGC 2 cut(s) 571, 1680
GsuI CTGGAG 2 cut(s) 1448, 1717
HaeII RGCGCY 1 cut(s) 175
HaeIII GGCC 7 cut(s) 98, 486, 559, 1059, 1076, 1364, 1628
HapII CCGG 4 cut(s) 329, 555, 1001, 1584
HhaI GCGC 1 cut(s) 174
Hin1II CATG 9 cut(s) 209, 472, 528, 1036, 1088, 1211, 1224, 1387, 1570
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HindIII AAGCTT 1 cut(s) 1433
HpaII CCGG 4 cut(s) 329, 555, 1001, 1584
HphI GGTGA 6 cut(s) 656, 670, 748, 1391, 1598, 1772
Hpy188I TCNGA 7 cut(s) 135, 141, 832, 844, 1149, 1609, 1735
HpyAV CCTTC 4 cut(s) 393, 604, 1604, 1747
HpyCH4III ACNGT 4 cut(s) 337, 767, 1346, 1669
HpyCH4IV ACGT 1 cut(s) 640
HpyF10VI GCNNNNNNNGC 6 cut(s) 483, 878, 923, 1258, 1290, 1293
HpyF3I CTNAG 8 cut(s) 23, 321, 563, 716, 782, 831, 1262, 1553
HpySE526I ACGT 1 cut(s) 640
Hsp92II CATG 9 cut(s) 209, 472, 528, 1036, 1088, 1211, 1224, 1387, 1570
HspAI GCGC 1 cut(s) 172
Ksp22I TGATCA 2 cut(s) 631, 661
Kzo9I GATC 6 cut(s) 37, 352, 631, 661, 1411, 1779
LmnI GCTCC 4 cut(s) 223, 844, 938, 1673
Lsp1109I GCAGC 5 cut(s) 244, 1151, 1264, 1296, 1305
LweI GCATC 4 cut(s) 1151, 1260, 1296, 1470
MabI ACCWGGT 1 cut(s) 1050
MaeI CTAG 8 cut(s) 194, 539, 890, 1061, 1281, 1419, 1455, 1828
MaeII ACGT 1 cut(s) 640
MaeIII GTNAC 9 cut(s) 264, 381, 655, 676, 849, 1042, 1379, 1421, 1760
MalI GATC 6 cut(s) 39, 354, 633, 663, 1413, 1781
MbiI CCGCTC 1 cut(s) 101
MboI GATC 6 cut(s) 37, 352, 631, 661, 1411, 1779
MboII GAAGA 9 cut(s) 68, 71, 194, 893, 957, 1162, 1517, 1559, 1781
MflI RGATCY 1 cut(s) 1411
MhlI GDGCHC 1 cut(s) 488
MlsI TGGCCA 1 cut(s) 1076
MluNI TGGCCA 1 cut(s) 1076
MlyI GAGTC 3 cut(s) 192, 272, 581
MmeI TCCRAC 1 cut(s) 1293
Mox20I TGGCCA 1 cut(s) 1076
MscI TGGCCA 1 cut(s) 1076
MseI TTAA 4 cut(s) 300, 1233, 1511, 1710
Msp20I TGGCCA 1 cut(s) 1076
MspA1I CMGCKG 1 cut(s) 567
MspI CCGG 4 cut(s) 329, 555, 1001, 1584
MvaI CCWGG 8 cut(s) 357, 463, 489, 583, 855, 874, 1052, 1427
MvnI CGCG 1 cut(s) 1596
MwoI GCNNNNNNNGC 6 cut(s) 483, 878, 923, 1258, 1290, 1293
NciI CCSGG 2 cut(s) 556, 1001
NdeI CATATG 1 cut(s) 1450
NdeII GATC 6 cut(s) 37, 352, 631, 661, 1411, 1779
NheI GCTAGC 1 cut(s) 1280
NlaIII CATG 9 cut(s) 209, 472, 528, 1036, 1088, 1211, 1224, 1387, 1570
NlaIV GGNNCC 7 cut(s) 219, 327, 429, 485, 486, 495, 1523
NmuCI GTSAC 6 cut(s) 264, 655, 676, 1042, 1379, 1760
NruI TCGCGA 1 cut(s) 1596
NspI RCATGY 1 cut(s) 1570
NspV TTCGAA 1 cut(s) 1792
PagI TCATGA 1 cut(s) 1032
PasI CCCWGGG 2 cut(s) 462, 488
PciI ACATGT 1 cut(s) 1566
PfeI GAWTC 7 cut(s) 88, 136, 185, 233, 521, 535, 803
PinAI ACCGGT 1 cut(s) 1583
PkrI GCNGC 8 cut(s) 100, 217, 259, 694, 1141, 1279, 1286, 1295
PleI GAGTC 3 cut(s) 192, 271, 580
PpsI GAGTC 3 cut(s) 192, 271, 580
PscI ACATGT 1 cut(s) 1566
Psp6I CCWGG 8 cut(s) 355, 461, 487, 581, 853, 872, 1050, 1425
PspFI CCCAGC 2 cut(s) 567, 1676
PspGI CCWGG 8 cut(s) 355, 461, 487, 581, 853, 872, 1050, 1425
PspN4I GGNNCC 7 cut(s) 219, 327, 429, 485, 486, 495, 1523
PspOMI GGGCCC 1 cut(s) 484
PspPI GGNCC 8 cut(s) 96, 326, 484, 485, 557, 585, 1127, 1363
PstI CTGCAG 1 cut(s) 262
PsuI RGATCY 1 cut(s) 1411
PvuII CAGCTG 1 cut(s) 567
RruI TCGCGA 1 cut(s) 1596
RsaI GTAC 4 cut(s) 5, 83, 546, 1666
RsaNI GTAC 4 cut(s) 4, 82, 545, 1665
SaqAI TTAA 4 cut(s) 300, 1233, 1511, 1710
SatI GCNGC 8 cut(s) 99, 216, 258, 693, 1140, 1278, 1285, 1294
Sau3AI GATC 6 cut(s) 37, 352, 631, 661, 1411, 1779
Sau96I GGNCC 8 cut(s) 96, 326, 484, 485, 557, 585, 1127, 1363
SchI GAGTC 3 cut(s) 192, 272, 581
SduI GDGCHC 1 cut(s) 488
SexAI ACCWGGT 1 cut(s) 1050
SfaNI GCATC 4 cut(s) 1151, 1260, 1296, 1470
SfcI CTRYAG 3 cut(s) 258, 346, 1819
SfuI TTCGAA 1 cut(s) 1792
SinI GGWCC 3 cut(s) 326, 585, 1127
SsiI CCGC 5 cut(s) 99, 215, 431, 692, 877
SspMI CTAG 8 cut(s) 194, 539, 890, 1061, 1281, 1419, 1455, 1828
TaaI ACNGT 4 cut(s) 337, 767, 1346, 1669
TaiI ACGT 1 cut(s) 643
TaqI TCGA 4 cut(s) 190, 1186, 1443, 1792
TatI WGTACW 3 cut(s) 3, 544, 1664
TauI GCSGC 3 cut(s) 101, 218, 695
TfiI GAWTC 7 cut(s) 88, 136, 185, 233, 521, 535, 803
Tru1I TTAA 4 cut(s) 300, 1233, 1511, 1710
Tru9I TTAA 4 cut(s) 300, 1233, 1511, 1710
TscAI CASTG 1 cut(s) 1023
TseFI GTSAC 6 cut(s) 264, 655, 676, 1042, 1379, 1760
TseI GCWGC 5 cut(s) 257, 1139, 1277, 1284, 1293
Tsp45I GTSAC 6 cut(s) 264, 655, 676, 1042, 1379, 1760
TspGWI ACGGA 2 cut(s) 404, 457
TspRI CASTG 1 cut(s) 1023
VpaK11BI GGWCC 3 cut(s) 326, 585, 1127
XapI RAATTY 3 cut(s) 826, 1069, 1728
XbaI TCTAGA 1 cut(s) 538
XceI RCATGY 1 cut(s) 1570
XcmI CCANNNNNNNNNTGG 1 cut(s) 880
XspI CTAG 8 cut(s) 194, 539, 890, 1061, 1281, 1419, 1455, 1828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.