Rh2BG033500

Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0002341
Physical Location & Seq
Reverse (-)
2311395 .. 2320340
8946 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG033500.1

Sequence Viewer

Length: 1371 bp
ATGGACGTCGATCACGATCACGATCACGGCTACGGTTCTCATTTGGTTAGAATGGAAGCGGCGGACGTCGCCTACGGATTTCGGCCTCGTGATGTACCCGAGAGACTGATATACGATGACGAAAGCACACCGGAAGAAATTAGCATAGATGATGAGAGTCACTGGATACAGAAGCAACTTGAACTGTTGTTTGGTCCATTGAGCAGCAATGACATCTCCAGGTTTTTGTACATGCACCATGTGCGAAAACTGGATATTCCTTTTATTGCAATGTACGGGAAAGATGACTGCCTTAGCTTATTGAAAGATCATCCTGAACAACCTGAAGAAGAAAAATCTAAAGTAAAGTGGTACAGGATTCTGTGGGCCGCTCAGGAATTGCACAAAAAGTGGTTGCTGTTTCAGAATCAGAAAAGGGCTTTGCGATTTTACTACACTAAGCGCTTTGAGGAAGAATCTCGACTAGGACTCTTACATGATAAGAAGGCTCCACAGCTTTTTGAATCAATTATCAACTCACTCCGAGCTGCAGAGTCAGAGAGGGAGGTTGAGGATATCAACAGCAAGTTTAACTTGCATTTCCCTGCAACTGAGGGTCCGGCTACTATTGTTATCTGTAGTGATCCAGGTGTCAGTAGAGCTAAAAACTCGTTACTTACGGAATATGGAAGAGCTTTGTTCAATAAAGTCTCTGTGGCACCGCCATATCAACGGAATGAAACTGCACCACCCAGGGTCATGGCTTGCTGTTGGGGCCCTGGGGACCCTGCAACAACTTTAGTGATGTTAGATTCATGTGGGGAGATTCTAGATGTACTTTGCACCGGGCCTCTCAGCTGGGAGTCTCTTACCTGGACCATACCCTTCTTTGATGAAGCTACTCAACAGCGTATGAATTGTGATCAAGAACGTATTTTGAAGTTTGTGACTGATCACCAACCTGATATCGCTATCATAGGAGCGGCTAATATGTCTTGTCCTCTCCTGAGAGAACAACTGCTTTGGGTGAGTGATACAATGATGATGAAACCTGACAGTAGAGCAAGCCCCCTAAGGATTGTGTATGGGGATGAATCTCTGGCTCGCCTATATGAGAATTCTGAGATTTCATCGGAGCAGTTACCTGGACGATCAGGCATTGCCAGGCGGGCTGTGGCTCTAGGGCGTTATCTTCAAAATCCATTGGCAATGGTTGCCACATTGTGTGGAGCTGGAAGAGAAATCCTACCTGATGAGAACTGGTGCAATGGTATTCCTCGGTGCTATGGTACTGGTGCCGTGCATTGGCTACGACTGATACAGAAGTTGGAGCGGATGGCATTGGTGGTTAGGCGCTTGTTGGCTCTACTTCAGGTTCTAGCTAGCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000018 GO:0000785 GO:0000988 GO:0000990 GO:0000991 GO:0002637 GO:0002682 GO:0002694 GO:0002697 GO:0002700 GO:0002703 GO:0002706 GO:0002712 GO:0002819 GO:0002822 GO:0002889 GO:0003006 GO:0003674 GO:0003682 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006325 GO:0006338 GO:0006342 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009299 GO:0009506 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010154 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010639 GO:0010793 GO:0016043 GO:0016070 GO:0016071 GO:0016458 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0030054 GO:0031056 GO:0031057 GO:0031060 GO:0031061 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031491 GO:0031974 GO:0031981 GO:0032239 GO:0032268 GO:0032269 GO:0032386 GO:0032501 GO:0032502 GO:0032774 GO:0032784 GO:0032786 GO:0032879 GO:0032880 GO:0032968 GO:0032991 GO:0033043 GO:0033044 GO:0033157 GO:0034243 GO:0034641 GO:0034645 GO:0034654 GO:0034728 GO:0035327 GO:0040029 GO:0042393 GO:0042789 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0043954 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045191 GO:0045595 GO:0045814 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0046822 GO:0046825 GO:0046831 GO:0048316 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050684 GO:0050776 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0051049 GO:0051052 GO:0051128 GO:0051129 GO:0051147 GO:0051171 GO:0051172 GO:0051173 GO:0051223 GO:0051239 GO:0051246 GO:0051248 GO:0051249 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0055044 GO:0060255 GO:0060341 GO:0061085 GO:0061086 GO:0061458 GO:0065007 GO:0070013 GO:0070201 GO:0070827 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090087 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902275 GO:1902679 GO:1902680 GO:1903311 GO:1903506 GO:1903507 GO:1903508 GO:1903827 GO:1905268 GO:2000026 GO:2000112 GO:2000113 GO:2000197 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DLD HHH_7 HTH_44 SH2_2 SPT6_acidic YqgF

Protein Analysis

456

Amino Acids

52.07

Weight (kDa)

5.62

Isoelectric Point (pI)

49.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YqgF PF14639 246 - 402 2.2e-14 Holliday-junction resolvase-like of SPT6
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 9, 69
AccB1I GGYRCC 2 cut(s) 697, 1274
AccBSI CCGCTC 3 cut(s) 371, 962, 1312
AciI CCGC 7 cut(s) 59, 62, 369, 701, 962, 1147, 1312
AclWI GGATC 1 cut(s) 617
AcsI RAATTY 1 cut(s) 1096
AcuI CTGAAG 2 cut(s) 345, 1334
AcyI GRCGYC 2 cut(s) 6, 66
AdeI CACNNNGTG 2 cut(s) 241, 1203
AfaI GTAC 6 cut(s) 96, 230, 275, 353, 816, 1270
AfeI AGCGCT 1 cut(s) 443
AfiI CCNNNNNNNGG 1 cut(s) 1284
AgsI TTSAA 6 cut(s) 182, 304, 503, 682, 919, 1175
AjnI CCWGG 7 cut(s) 218, 625, 731, 757, 851, 1123, 1142
AjuI GAANNNNNNNTTGG 2 cut(s) 174, 206
AluBI AGCT 9 cut(s) 297, 496, 527, 641, 674, 837, 878, 1211, 1361
AluI AGCT 9 cut(s) 297, 496, 527, 641, 674, 837, 878, 1211, 1361
Alw26I GTCTC 3 cut(s) 97, 694, 849
AlwI GGATC 1 cut(s) 617
Ama87I CYCGRG 1 cut(s) 98
Aor51HI AGCGCT 1 cut(s) 443
AoxI GGCC 4 cut(s) 83, 366, 754, 827
ApaI GGGCCC 1 cut(s) 758
ApeKI GCWGC 2 cut(s) 204, 527
ApoI RAATTY 1 cut(s) 1096
AspLEI GCGC 2 cut(s) 444, 1335
AspS9I GGNCC 8 cut(s) 194, 366, 596, 754, 755, 763, 827, 855
AsuC2I CCSGG 1 cut(s) 826
AsuHPI GGTGA 2 cut(s) 926, 1018
AsuNHI GCTAGC 1 cut(s) 1361
AvaI CYCGRG 1 cut(s) 98
AvaII GGWCC 4 cut(s) 194, 596, 763, 855
AxyI CCTNAGG 1 cut(s) 1052
BaeGI GKGCMC 1 cut(s) 758
BaeI ACNNNNGTAYC 2 cut(s) 1289, 1322
BanI GGYRCC 2 cut(s) 697, 1274
BanII GRGCYC 1 cut(s) 758
BauI CACGAG 1 cut(s) 87
BbvI GCAGC 2 cut(s) 216, 514
BccI CCATC 1 cut(s) 1309
BceAI ACGGC 2 cut(s) 43, 1262
BciT130I CCWGG 7 cut(s) 220, 627, 733, 759, 853, 1125, 1144
BciVI GTATCC 1 cut(s) 159
BclI TGATCA 2 cut(s) 901, 931
BcnI CCSGG 1 cut(s) 826
BcoDI GTCTC 3 cut(s) 97, 694, 849
BfaI CTAG 5 cut(s) 464, 809, 1160, 1358, 1362
BfmI CTRYAG 2 cut(s) 528, 616
BfoI RGCGCY 2 cut(s) 445, 1336
BfuI GTATCC 1 cut(s) 159
BglI GCCNNNNNGGC 1 cut(s) 1148
BisI GCNGC 5 cut(s) 60, 205, 369, 528, 963
BlsI GCNGC 5 cut(s) 61, 206, 370, 529, 964
Bme1390I CCNGG 8 cut(s) 220, 627, 733, 759, 826, 853, 1125, 1144
Bme18I GGWCC 4 cut(s) 194, 596, 763, 855
BmeT110I CYCGRG 1 cut(s) 98
BmgT120I GGNCC 8 cut(s) 194, 366, 596, 754, 755, 763, 827, 855
BmiI GGNNCC 8 cut(s) 489, 597, 699, 755, 756, 764, 765, 1276
BmrFI CCNGG 8 cut(s) 220, 627, 733, 759, 826, 853, 1125, 1144
BmtI GCTAGC 1 cut(s) 1365
BpmI CTGGAG 1 cut(s) 202
Bpu10I CCTNAGC 2 cut(s) 293, 372
BpuMI CCSGG 1 cut(s) 826
BsaBI GATNNNNATC 2 cut(s) 15, 21
BsaHI GRCGYC 2 cut(s) 6, 66
BsaJI CCNNGG 5 cut(s) 731, 732, 757, 758, 1256
BsaWI WCCGGW 1 cut(s) 130
Bsc4I CCNNNNNNNGG 1 cut(s) 1284
Bse1I ACTGG 4 cut(s) 167, 255, 1244, 1276
Bse21I CCTNAGG 1 cut(s) 1052
Bse3DI GCAATG 5 cut(s) 214, 276, 1137, 1194, 1252
Bse8I GATNNNNATC 2 cut(s) 15, 21
BseBI CCWGG 7 cut(s) 220, 627, 733, 759, 853, 1125, 1144
BseDI CCNNGG 5 cut(s) 731, 732, 757, 758, 1256
BseGI GGATG 3 cut(s) 310, 1075, 1320
BseJI GATNNNNATC 2 cut(s) 15, 21
BseLI CCNNNNNNNGG 1 cut(s) 1284
BseMI GCAATG 5 cut(s) 214, 276, 1137, 1194, 1252
BseMII CTCAG 5 cut(s) 386, 582, 847, 977, 1092
BseNI ACTGG 4 cut(s) 167, 255, 1244, 1276
BseSI GKGCMC 1 cut(s) 758
BseXI GCAGC 2 cut(s) 216, 514
BseYI CCCAGC 1 cut(s) 837
BsgI GTGCAG 1 cut(s) 708
BshFI GGCC 4 cut(s) 85, 368, 756, 829
BshNI GGYRCC 2 cut(s) 697, 1274
BsiHKCI CYCGRG 1 cut(s) 98
BsiSI CCGG 3 cut(s) 131, 599, 825
BslFI GGGAC 1 cut(s) 776
BslI CCNNNNNNNGG 1 cut(s) 1284
BsmAI GTCTC 3 cut(s) 97, 694, 849
BsmFI GGGAC 1 cut(s) 776
BsnI GGCC 4 cut(s) 85, 368, 756, 829
BsoBI CYCGRG 1 cut(s) 98
Bsp120I GGGCCC 1 cut(s) 754
Bsp1286I GDGCHC 1 cut(s) 758
Bsp1407I TGTACA 1 cut(s) 228
Bsp143I GATC 8 cut(s) 10, 16, 22, 307, 622, 901, 931, 1130
BspACI CCGC 7 cut(s) 59, 62, 369, 701, 962, 1147, 1312
BspANI GGCC 4 cut(s) 85, 368, 756, 829
BspCNI CTCAG 5 cut(s) 385, 583, 846, 978, 1093
BspLI GGNNCC 8 cut(s) 489, 597, 699, 755, 756, 764, 765, 1276
BspMAI CTGCAG 1 cut(s) 532
BspOI GCTAGC 1 cut(s) 1365
BspPI GGATC 1 cut(s) 617
BspQI GCTCTTC 1 cut(s) 664
BspT107I GGYRCC 2 cut(s) 697, 1274
BsrBI CCGCTC 3 cut(s) 371, 962, 1312
BsrDI GCAATG 5 cut(s) 214, 276, 1137, 1194, 1252
BsrGI TGTACA 1 cut(s) 228
BsrI ACTGG 4 cut(s) 167, 255, 1244, 1276
BssECI CCNNGG 5 cut(s) 731, 732, 757, 758, 1256
BssMI GATC 8 cut(s) 10, 16, 22, 307, 622, 901, 931, 1130
BssNI GRCGYC 2 cut(s) 6, 66
BssSI CACGAG 1 cut(s) 87
Bst2BI CACGAG 1 cut(s) 87
Bst2UI CCWGG 7 cut(s) 220, 627, 733, 759, 853, 1125, 1144
Bst4CI ACNGT 3 cut(s) 35, 186, 1037
Bst6I CTCTTC 2 cut(s) 664, 1210
BstACI GRCGYC 2 cut(s) 6, 66
BstAPI GCANNNNNTGC 2 cut(s) 241, 1193
BstAUI TGTACA 1 cut(s) 228
BstC8I GCNNGC 5 cut(s) 745, 1045, 1084, 1149, 1363
BstDEI CTNAG 8 cut(s) 293, 372, 438, 591, 833, 986, 1052, 1101
BstF5I GGATG 3 cut(s) 310, 1075, 1320
BstH2I RGCGCY 2 cut(s) 445, 1336
BstHHI GCGC 2 cut(s) 444, 1335
BstKTI GATC 8 cut(s) 13, 19, 25, 310, 625, 904, 934, 1133
BstMAI GTCTC 3 cut(s) 97, 694, 849
BstMBI GATC 8 cut(s) 10, 16, 22, 307, 622, 901, 931, 1130
BstMWI GCNNNNNNNGC 5 cut(s) 68, 241, 753, 1148, 1193
BstNI CCWGG 7 cut(s) 220, 627, 733, 759, 853, 1125, 1144
BstNSI RCATGY 1 cut(s) 235
BstSCI CCNGG 8 cut(s) 218, 625, 731, 757, 824, 851, 1123, 1142
BstSFI CTRYAG 2 cut(s) 528, 616
BstSLI GKGCMC 1 cut(s) 758
BstV1I GCAGC 2 cut(s) 216, 514
BstXI CCANNNNNNTGG 1 cut(s) 739
Bsu36I CCTNAGG 1 cut(s) 1052
BsuI GTATCC 1 cut(s) 159
BsuRI GGCC 4 cut(s) 85, 368, 756, 829
BtsCI GGATG 3 cut(s) 310, 1075, 1320
BtsIMutI CAGTG 1 cut(s) 160
Cac8I GCNNGC 5 cut(s) 745, 1045, 1084, 1149, 1363
CfoI GCGC 2 cut(s) 444, 1335
Cfr13I GGNCC 8 cut(s) 194, 366, 596, 754, 755, 763, 827, 855
Csp6I GTAC 6 cut(s) 95, 229, 274, 352, 815, 1269
CviAII CATG 5 cut(s) 232, 239, 476, 739, 795
CviQI GTAC 6 cut(s) 95, 229, 274, 352, 815, 1269
DdeI CTNAG 8 cut(s) 293, 372, 438, 591, 833, 986, 1052, 1101
DpnI GATC 8 cut(s) 12, 18, 24, 309, 624, 903, 933, 1132
DpnII GATC 8 cut(s) 10, 16, 22, 307, 622, 901, 931, 1130
DraIII CACNNNGTG 2 cut(s) 241, 1203
Eam1104I CTCTTC 2 cut(s) 664, 1210
EarI CTCTTC 2 cut(s) 664, 1210
EciI GGCGGA 1 cut(s) 77
Eco24I GRGCYC 1 cut(s) 758
Eco32I GATATC 2 cut(s) 556, 946
Eco47I GGWCC 4 cut(s) 194, 596, 763, 855
Eco47III AGCGCT 1 cut(s) 443
Eco57I CTGAAG 2 cut(s) 345, 1334
Eco81I CCTNAGG 1 cut(s) 1052
Eco88I CYCGRG 1 cut(s) 98
EcoO109I RGGNCCY 3 cut(s) 754, 755, 763
EcoRI GAATTC 1 cut(s) 1096
EcoRII CCWGG 7 cut(s) 218, 625, 731, 757, 851, 1123, 1142
EcoRV GATATC 2 cut(s) 556, 946
EcoT38I GRGCYC 1 cut(s) 758
FaeI CATG 5 cut(s) 235, 242, 479, 742, 798
FalI AAGNNNNNCTT 2 cut(s) 557, 589
FaqI GGGAC 1 cut(s) 776
FatI CATG 5 cut(s) 231, 238, 475, 738, 794
FauI CCCGC 1 cut(s) 1140
FbaI TGATCA 2 cut(s) 901, 931
Fnu4HI GCNGC 5 cut(s) 60, 205, 369, 528, 963
FokI GGATG 3 cut(s) 297, 1082, 1327
FriOI GRGCYC 1 cut(s) 758
Fsp4HI GCNGC 5 cut(s) 60, 205, 369, 528, 963
FspBI CTAG 5 cut(s) 464, 809, 1160, 1358, 1362
GlaI GCGC 2 cut(s) 443, 1334
GluI GCNGC 5 cut(s) 60, 205, 369, 528, 963
GsaI CCCAGC 1 cut(s) 841
GsuI CTGGAG 1 cut(s) 202
HaeII RGCGCY 2 cut(s) 445, 1336
HaeIII GGCC 4 cut(s) 85, 368, 756, 829
HapII CCGG 3 cut(s) 131, 599, 825
HhaI GCGC 2 cut(s) 444, 1335
Hin1I GRCGYC 2 cut(s) 6, 66
Hin1II CATG 5 cut(s) 235, 242, 479, 742, 798
Hin6I GCGC 2 cut(s) 442, 1333
HinP1I GCGC 2 cut(s) 442, 1333
HpaII CCGG 3 cut(s) 131, 599, 825
HphI GGTGA 2 cut(s) 926, 1018
Hpy188I TCNGA 6 cut(s) 405, 411, 524, 538, 1102, 1114
Hpy188III TCNNGA 9 cut(s) 14, 20, 89, 314, 374, 459, 809, 905, 985
Hpy99I CGWCG 2 cut(s) 11, 71
HpyAV CCTTC 2 cut(s) 478, 874
HpyCH4III ACNGT 3 cut(s) 35, 186, 1037
HpyCH4IV ACGT 3 cut(s) 6, 66, 910
HpyF10VI GCNNNNNNNGC 5 cut(s) 68, 241, 753, 1148, 1193
HpyF3I CTNAG 8 cut(s) 293, 372, 438, 591, 833, 986, 1052, 1101
HpySE526I ACGT 3 cut(s) 6, 66, 910
Hsp92I GRCGYC 2 cut(s) 6, 66
Hsp92II CATG 5 cut(s) 235, 242, 479, 742, 798
HspAI GCGC 2 cut(s) 442, 1333
KflI GGGWCCC 1 cut(s) 763
Ksp22I TGATCA 2 cut(s) 901, 931
Kzo9I GATC 8 cut(s) 10, 16, 22, 307, 622, 901, 931, 1130
LguI GCTCTTC 1 cut(s) 664
LmnI GCTCC 5 cut(s) 493, 959, 1114, 1208, 1309
Lsp1109I GCAGC 2 cut(s) 216, 514
MaeI CTAG 5 cut(s) 464, 809, 1160, 1358, 1362
MaeII ACGT 3 cut(s) 6, 66, 910
MaeIII GTNAC 4 cut(s) 158, 651, 925, 1119
MalI GATC 8 cut(s) 12, 18, 24, 309, 624, 903, 933, 1132
MbiI CCGCTC 3 cut(s) 371, 962, 1312
MboI GATC 8 cut(s) 10, 16, 22, 307, 622, 901, 931, 1130
MboII GAAGA 7 cut(s) 146, 338, 341, 464, 681, 1163, 1227
MhlI GDGCHC 1 cut(s) 758
MluCI AATT 5 cut(s) 138, 377, 507, 895, 1096
MlyI GAGTC 4 cut(s) 166, 462, 542, 851
MmeI TCCRAC 1 cut(s) 1287
MnlI CCTC 9 cut(s) 96, 442, 534, 538, 544, 586, 840, 990, 1266
MseI TTAA 1 cut(s) 570
MspA1I CMGCKG 1 cut(s) 837
MspI CCGG 3 cut(s) 131, 599, 825
MspR9I CCNGG 8 cut(s) 220, 627, 733, 759, 826, 853, 1125, 1144
MvaI CCWGG 7 cut(s) 220, 627, 733, 759, 853, 1125, 1144
MwoI GCNNNNNNNGC 5 cut(s) 68, 241, 753, 1148, 1193
NciI CCSGG 1 cut(s) 826
NdeII GATC 8 cut(s) 10, 16, 22, 307, 622, 901, 931, 1130
NheI GCTAGC 1 cut(s) 1361
NlaIII CATG 5 cut(s) 235, 242, 479, 742, 798
NlaIV GGNNCC 8 cut(s) 489, 597, 699, 755, 756, 764, 765, 1276
NmuCI GTSAC 2 cut(s) 158, 925
NspI RCATGY 1 cut(s) 235
PasI CCCWGGG 2 cut(s) 732, 758
PciSI GCTCTTC 1 cut(s) 664
PcsI WCGNNNNNNNCGW 1 cut(s) 12
PfeI GAWTC 7 cut(s) 358, 406, 455, 503, 791, 805, 1073
PkrI GCNGC 5 cut(s) 61, 206, 370, 529, 964
PleI GAGTC 4 cut(s) 165, 462, 541, 850
PpsI GAGTC 4 cut(s) 165, 462, 541, 850
PpuMI RGGWCCY 1 cut(s) 763
Psp5II RGGWCCY 1 cut(s) 763
Psp6I CCWGG 7 cut(s) 218, 625, 731, 757, 851, 1123, 1142
PspFI CCCAGC 1 cut(s) 837
PspGI CCWGG 7 cut(s) 218, 625, 731, 757, 851, 1123, 1142
PspN4I GGNNCC 8 cut(s) 489, 597, 699, 755, 756, 764, 765, 1276
PspOMI GGGCCC 1 cut(s) 754
PspPI GGNCC 8 cut(s) 194, 366, 596, 754, 755, 763, 827, 855
PspPPI RGGWCCY 1 cut(s) 763
PstI CTGCAG 1 cut(s) 532
PvuII CAGCTG 1 cut(s) 837
RsaI GTAC 6 cut(s) 96, 230, 275, 353, 816, 1270
RsaNI GTAC 6 cut(s) 95, 229, 274, 352, 815, 1269
SapI GCTCTTC 1 cut(s) 664
SaqAI TTAA 1 cut(s) 570
SatI GCNGC 5 cut(s) 60, 205, 369, 528, 963
Sau3AI GATC 8 cut(s) 10, 16, 22, 307, 622, 901, 931, 1130
Sau96I GGNCC 8 cut(s) 194, 366, 596, 754, 755, 763, 827, 855
SchI GAGTC 4 cut(s) 166, 462, 542, 851
ScrFI CCNGG 8 cut(s) 220, 627, 733, 759, 826, 853, 1125, 1144
SduI GDGCHC 1 cut(s) 758
SfcI CTRYAG 2 cut(s) 528, 616
SinI GGWCC 4 cut(s) 194, 596, 763, 855
Sse9I AATT 5 cut(s) 138, 377, 507, 895, 1096
SsiI CCGC 7 cut(s) 59, 62, 369, 701, 962, 1147, 1312
SspMI CTAG 5 cut(s) 464, 809, 1160, 1358, 1362
StyD4I CCNGG 8 cut(s) 218, 625, 731, 757, 824, 851, 1123, 1142
TaaI ACNGT 3 cut(s) 35, 186, 1037
TaiI ACGT 3 cut(s) 9, 69, 913
TaqI TCGA 2 cut(s) 9, 460
TasI AATT 5 cut(s) 138, 377, 507, 895, 1096
TatI WGTACW 2 cut(s) 228, 814
TauI GCSGC 3 cut(s) 62, 371, 965
TfiI GAWTC 7 cut(s) 358, 406, 455, 503, 791, 805, 1073
Tru1I TTAA 1 cut(s) 570
Tru9I TTAA 1 cut(s) 570
TscAI CASTG 1 cut(s) 167
TseFI GTSAC 2 cut(s) 158, 925
TseI GCWGC 2 cut(s) 204, 527
Tsp45I GTSAC 2 cut(s) 158, 925
TspDTI ATGAA 7 cut(s) 732, 783, 888, 908, 1040, 1086, 1098
TspGWI ACGGA 3 cut(s) 90, 674, 727
TspRI CASTG 1 cut(s) 167
VpaK11BI GGWCC 4 cut(s) 194, 596, 763, 855
XapI RAATTY 1 cut(s) 1096
XbaI TCTAGA 1 cut(s) 808
XceI RCATGY 1 cut(s) 235
XcmI CCANNNNNNNNNTGG 1 cut(s) 1150
XspI CTAG 5 cut(s) 464, 809, 1160, 1358, 1362
ZraI GACGTC 2 cut(s) 7, 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.