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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g05721 |
| rosa_chinensis | RchiOBHm_Chr1g0343511 |
| rosa_laevigata | RLG00000019160 RLG00000019378 RLG00000019379 RLG00000022496 RLG00000022772 RLG00000022774 RLG00000029386 RLG00000029511 RLG00000029513 RLG00000029661 |
| rosa_multiflora | Rmu_sc0000335.1_g000029 Rmu_sc0003219.1_g000018 Rmu_sc0004118.1_g000007 Rmu_sc0004413.1_g000011 Rmu_sc0006695.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00113320 Rroxscaffold_2G00113360 Rroxscaffold_3G00235530 Rroxscaffold_3G00235540 Rroxscaffold_4G00314360 Rroxscaffold_5G00335830 Rroxscaffold_5G00349870 Rroxscaffold_6G00389460 |
| rosa_samantha | Rh2AG346000 Rh2AG346100 Rh2AG346400 Rh2AG346500 Rh2CG332600 Rh3AG327300 Rh3CG360300 Rh3DG363500 Rh7BG352700 Rh7DG378200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 170 |
| AciI | CCGC | 3 cut(s) | 16, 278, 337 |
| AclWI | GGATC | 2 cut(s) | 177, 269 |
| AcuI | CTGAAG | 2 cut(s) | 425, 468 |
| AgsI | TTSAA | 3 cut(s) | 136, 208, 236 |
| AluBI | AGCT | 9 cut(s) | 28, 75, 101, 239, 360, 376, 383, 419, 476 |
| AluI | AGCT | 9 cut(s) | 28, 75, 101, 239, 360, 376, 383, 419, 476 |
| Alw26I | GTCTC | 1 cut(s) | 69 |
| AlwI | GGATC | 2 cut(s) | 177, 269 |
| AoxI | GGCC | 1 cut(s) | 285 |
| ApeKI | GCWGC | 1 cut(s) | 101 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 152, 184 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 301 |
| AspS9I | GGNCC | 1 cut(s) | 456 |
| AsuC2I | CCSGG | 1 cut(s) | 460 |
| AsuHPI | GGTGA | 4 cut(s) | 221, 227, 238, 275 |
| AvaII | GGWCC | 1 cut(s) | 456 |
| BanII | GRGCYC | 1 cut(s) | 119 |
| BbvCI | CCTCAGC | 1 cut(s) | 384 |
| BbvI | GCAGC | 1 cut(s) | 88 |
| BccI | CCATC | 3 cut(s) | 13, 206, 458 |
| BceAI | ACGGC | 1 cut(s) | 330 |
| BciVI | GTATCC | 1 cut(s) | 401 |
| BcnI | CCSGG | 1 cut(s) | 460 |
| BcoDI | GTCTC | 1 cut(s) | 69 |
| BfuI | GTATCC | 1 cut(s) | 401 |
| BisI | GCNGC | 1 cut(s) | 102 |
| BlsI | GCNGC | 1 cut(s) | 103 |
| Bme1390I | CCNGG | 1 cut(s) | 460 |
| Bme18I | GGWCC | 1 cut(s) | 456 |
| BmgT120I | GGNCC | 1 cut(s) | 456 |
| BmrFI | CCNGG | 1 cut(s) | 460 |
| BmrI | ACTGGG | 1 cut(s) | 181 |
| BmsI | GCATC | 1 cut(s) | 235 |
| BmuI | ACTGGG | 1 cut(s) | 181 |
| Bpu10I | CCTNAGC | 1 cut(s) | 384 |
| BpuMI | CCSGG | 1 cut(s) | 460 |
| BsaJI | CCNNGG | 1 cut(s) | 459 |
| Bse1I | ACTGG | 1 cut(s) | 187 |
| BseDI | CCNNGG | 1 cut(s) | 459 |
| BseGI | GGATG | 2 cut(s) | 5, 469 |
| BseMII | CTCAG | 2 cut(s) | 236, 375 |
| BseNI | ACTGG | 1 cut(s) | 187 |
| BseXI | GCAGC | 1 cut(s) | 88 |
| BshFI | GGCC | 1 cut(s) | 287 |
| BsiSI | CCGG | 1 cut(s) | 459 |
| BsmAI | GTCTC | 1 cut(s) | 69 |
| BsmI | GAATGC | 2 cut(s) | 142, 468 |
| BsnI | GGCC | 1 cut(s) | 287 |
| Bsp1286I | GDGCHC | 1 cut(s) | 119 |
| Bsp143I | GATC | 4 cut(s) | 182, 196, 274, 412 |
| BspACI | CCGC | 3 cut(s) | 16, 278, 337 |
| BspANI | GGCC | 1 cut(s) | 287 |
| BspCNI | CTCAG | 2 cut(s) | 235, 376 |
| BspPI | GGATC | 2 cut(s) | 177, 269 |
| BspQI | GCTCTTC | 1 cut(s) | 359 |
| BsrI | ACTGG | 1 cut(s) | 187 |
| BssECI | CCNNGG | 1 cut(s) | 459 |
| BssMI | GATC | 4 cut(s) | 182, 196, 274, 412 |
| Bst6I | CTCTTC | 3 cut(s) | 359, 442, 483 |
| BstDEI | CTNAG | 4 cut(s) | 222, 356, 377, 384 |
| BstF5I | GGATG | 2 cut(s) | 5, 469 |
| BstKTI | GATC | 4 cut(s) | 185, 199, 277, 415 |
| BstMAI | GTCTC | 1 cut(s) | 69 |
| BstMBI | GATC | 4 cut(s) | 182, 196, 274, 412 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 137, 336, 366 |
| BstSCI | CCNGG | 1 cut(s) | 458 |
| BstV1I | GCAGC | 1 cut(s) | 88 |
| BstX2I | RGATCY | 2 cut(s) | 182, 274 |
| BstYI | RGATCY | 2 cut(s) | 182, 274 |
| BsuI | GTATCC | 1 cut(s) | 401 |
| BsuRI | GGCC | 1 cut(s) | 287 |
| BtsCI | GGATG | 2 cut(s) | 5, 469 |
| Cfr13I | GGNCC | 1 cut(s) | 456 |
| DdeI | CTNAG | 4 cut(s) | 222, 356, 377, 384 |
| DpnI | GATC | 4 cut(s) | 184, 198, 276, 414 |
| DpnII | GATC | 4 cut(s) | 182, 196, 274, 412 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 170 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 170 |
| Eam1104I | CTCTTC | 3 cut(s) | 359, 442, 483 |
| EarI | CTCTTC | 3 cut(s) | 359, 442, 483 |
| Eco24I | GRGCYC | 1 cut(s) | 119 |
| Eco32I | GATATC | 1 cut(s) | 292 |
| Eco47I | GGWCC | 1 cut(s) | 456 |
| Eco57I | CTGAAG | 2 cut(s) | 425, 468 |
| EcoRV | GATATC | 1 cut(s) | 292 |
| EcoT38I | GRGCYC | 1 cut(s) | 119 |
| FaiI | YATR | 3 cut(s) | 41, 43, 111 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 90, 122 |
| FauI | CCCGC | 1 cut(s) | 344 |
| FauNDI | CATATG | 1 cut(s) | 41 |
| Fnu4HI | GCNGC | 1 cut(s) | 102 |
| FokI | GGATG | 1 cut(s) | 476 |
| FriOI | GRGCYC | 1 cut(s) | 119 |
| Fsp4HI | GCNGC | 1 cut(s) | 102 |
| GluI | GCNGC | 1 cut(s) | 102 |
| HaeIII | GGCC | 1 cut(s) | 287 |
| HapII | CCGG | 1 cut(s) | 459 |
| HindIII | AAGCTT | 1 cut(s) | 237 |
| HinfI | GANTC | 2 cut(s) | 62, 352 |
| HpaII | CCGG | 1 cut(s) | 459 |
| HphI | GGTGA | 4 cut(s) | 221, 227, 238, 275 |
| Hpy188I | TCNGA | 3 cut(s) | 296, 351, 487 |
| Hpy188III | TCNNGA | 2 cut(s) | 180, 433 |
| Hpy99I | CGWCG | 2 cut(s) | 164, 351 |
| HpyAV | CCTTC | 3 cut(s) | 242, 398, 449 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 137, 336, 366 |
| HpyF3I | CTNAG | 4 cut(s) | 222, 356, 377, 384 |
| Kzo9I | GATC | 4 cut(s) | 182, 196, 274, 412 |
| LguI | GCTCTTC | 1 cut(s) | 359 |
| LmnI | GCTCC | 1 cut(s) | 83 |
| LpnPI | CCDG | 4 cut(s) | 193, 200, 409, 472 |
| Lsp1109I | GCAGC | 1 cut(s) | 88 |
| LweI | GCATC | 1 cut(s) | 235 |
| MalI | GATC | 4 cut(s) | 184, 198, 276, 414 |
| MboI | GATC | 4 cut(s) | 182, 196, 274, 412 |
| MboII | GAAGA | 2 cut(s) | 376, 459 |
| MflI | RGATCY | 2 cut(s) | 182, 274 |
| MhlI | GDGCHC | 1 cut(s) | 119 |
| MluCI | AATT | 3 cut(s) | 31, 144, 318 |
| MlyI | GAGTC | 2 cut(s) | 71, 361 |
| MmeI | TCCRAC | 1 cut(s) | 329 |
| MnlI | CCTC | 4 cut(s) | 351, 379, 421, 484 |
| MroXI | GAANNNNTTC | 1 cut(s) | 301 |
| MseI | TTAA | 1 cut(s) | 30 |
| MspA1I | CMGCKG | 1 cut(s) | 75 |
| MspI | CCGG | 1 cut(s) | 459 |
| MspR9I | CCNGG | 1 cut(s) | 460 |
| Mva1269I | GAATGC | 2 cut(s) | 142, 468 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 137, 336, 366 |
| NciI | CCSGG | 1 cut(s) | 460 |
| NdeI | CATATG | 1 cut(s) | 41 |
| NdeII | GATC | 4 cut(s) | 182, 196, 274, 412 |
| PciSI | GCTCTTC | 1 cut(s) | 359 |
| PctI | GAATGC | 2 cut(s) | 142, 468 |
| PdmI | GAANNNNTTC | 1 cut(s) | 301 |
| PkrI | GCNGC | 1 cut(s) | 103 |
| PleI | GAGTC | 2 cut(s) | 70, 360 |
| PpsI | GAGTC | 2 cut(s) | 70, 360 |
| PspPI | GGNCC | 1 cut(s) | 456 |
| PsuI | RGATCY | 2 cut(s) | 182, 274 |
| PvuII | CAGCTG | 1 cut(s) | 75 |
| SapI | GCTCTTC | 1 cut(s) | 359 |
| SaqAI | TTAA | 1 cut(s) | 30 |
| SatI | GCNGC | 1 cut(s) | 102 |
| Sau3AI | GATC | 4 cut(s) | 182, 196, 274, 412 |
| Sau96I | GGNCC | 1 cut(s) | 456 |
| SchI | GAGTC | 2 cut(s) | 71, 361 |
| ScrFI | CCNGG | 1 cut(s) | 460 |
| SduI | GDGCHC | 1 cut(s) | 119 |
| SfaNI | GCATC | 1 cut(s) | 235 |
| SinI | GGWCC | 1 cut(s) | 456 |
| Sse9I | AATT | 3 cut(s) | 31, 144, 318 |
| SsiI | CCGC | 3 cut(s) | 16, 278, 337 |
| StyD4I | CCNGG | 1 cut(s) | 458 |
| TaqI | TCGA | 4 cut(s) | 159, 195, 362, 472 |
| TasI | AATT | 3 cut(s) | 31, 144, 318 |
| Tru1I | TTAA | 1 cut(s) | 30 |
| Tru9I | TTAA | 1 cut(s) | 30 |
| TseI | GCWGC | 1 cut(s) | 101 |
| TspGWI | ACGGA | 1 cut(s) | 164 |
| VpaK11BI | GGWCC | 1 cut(s) | 456 |
| XmnI | GAANNNNTTC | 1 cut(s) | 301 |