(NAC) domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g17950 FvH4_7g17950 FvH4_7g17950 FvH4_7g18000 FvH4_7g18000 FvH4_7g18210 FvH4_7g18210 FvH4_7g18260 FvH4_7g18260 |
| rosa_chinensis | RchiOBHm_Chr1g0333721 RchiOBHm_Chr1g0361391 RchiOBHm_Chr1g0361441 RchiOBHm_Chr1g0361471 RchiOBHm_Chr1g0361531 |
| rosa_laevigata | RLG00000014879 RLG00000027718 RLG00000027720 RLG00000029533 |
| rosa_multiflora | Rmu_sc0002119.1_g000005 Rmu_sc0002119.1_g000006 Rmu_sc0002119.1_g000022 Rmu_sc0003693.1_g000011 Rmu_sc0006417.1_g000010 Rmu_sc0010384.1_g000005 Rmu_sc0042164.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00294940 Rroxscaffold_4G00294980 Rroxscaffold_4G00294990 |
| rosa_rugosa | Rorug01G0111500 Rorug01G0289400 Rorug01G0289500 Rorug01G0289600 Rorug01G0289600 Rorug01G0289700 Rorug01G0289900 |
| rosa_samantha | Rh1AG133600 Rh1AG300200 |
| rosa_wichuraiana | Rw1G011160 Rw1G026560 Rw1G026600 Rw1G026620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 432, 1000 |
| AccB1I | GGYRCC | 1 cut(s) | 1232 |
| AccII | CGCG | 1 cut(s) | 174 |
| AciI | CCGC | 5 cut(s) | 28, 172, 517, 699, 1364 |
| AclI | AACGTT | 1 cut(s) | 618 |
| AclWI | GGATC | 7 cut(s) | 113, 126, 416, 557, 627, 640, 1417 |
| AcsI | RAATTY | 4 cut(s) | 206, 899, 1071, 1345 |
| AcuI | CTGAAG | 1 cut(s) | 229 |
| AfaI | GTAC | 1 cut(s) | 1565 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 64, 593 |
| AjnI | CCWGG | 7 cut(s) | 90, 186, 338, 876, 1159, 1393, 1663 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 888, 920 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 640, 672 |
| Alw21I | GWGCWC | 2 cut(s) | 977, 1542 |
| Alw26I | GTCTC | 1 cut(s) | 616 |
| AlwI | GGATC | 7 cut(s) | 113, 126, 416, 557, 627, 640, 1417 |
| Ama87I | CYCGRG | 1 cut(s) | 1535 |
| AoxI | GGCC | 4 cut(s) | 216, 374, 714, 1170 |
| ApeKI | GCWGC | 9 cut(s) | 21, 76, 600, 705, 807, 839, 842, 1002, 1361 |
| ApoI | RAATTY | 4 cut(s) | 206, 899, 1071, 1345 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 117, 149 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1336 |
| AspLEI | GCGC | 1 cut(s) | 114 |
| AspS9I | GGNCC | 1 cut(s) | 375 |
| AsuC2I | CCSGG | 1 cut(s) | 1458 |
| AsuHPI | GGTGA | 6 cut(s) | 106, 593, 808, 1048, 1203, 1619 |
| AvaI | CYCGRG | 1 cut(s) | 1535 |
| BaeGI | GKGCMC | 1 cut(s) | 1235 |
| BamHI | GGATCC | 2 cut(s) | 118, 632 |
| BanI | GGYRCC | 1 cut(s) | 1232 |
| BanII | GRGCYC | 3 cut(s) | 171, 977, 1542 |
| BauI | CACGAG | 1 cut(s) | 164 |
| Bbv12I | GWGCWC | 2 cut(s) | 977, 1542 |
| BbvI | GCAGC | 9 cut(s) | 33, 63, 587, 692, 794, 826, 854, 989, 1348 |
| BccI | CCATC | 5 cut(s) | 569, 821, 842, 1447, 1513 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 193, 227 |
| BciT130I | CCWGG | 7 cut(s) | 92, 188, 340, 878, 1161, 1395, 1665 |
| BclI | TGATCA | 2 cut(s) | 544, 550 |
| BcnI | CCSGG | 1 cut(s) | 1458 |
| BcoDI | GTCTC | 1 cut(s) | 616 |
| BfmI | CTRYAG | 4 cut(s) | 601, 706, 840, 1205 |
| BfuAI | ACCTGC | 2 cut(s) | 432, 1000 |
| Bme1390I | CCNGG | 8 cut(s) | 92, 188, 340, 878, 1161, 1395, 1458, 1665 |
| BmeT110I | CYCGRG | 1 cut(s) | 1535 |
| BmgT120I | GGNCC | 1 cut(s) | 375 |
| BmiI | GGNNCC | 4 cut(s) | 120, 337, 634, 1234 |
| BmrFI | CCNGG | 8 cut(s) | 92, 188, 340, 878, 1161, 1395, 1458, 1665 |
| BmrI | ACTGGG | 1 cut(s) | 457 |
| BmsI | GCATC | 3 cut(s) | 39, 746, 1357 |
| BmuI | ACTGGG | 1 cut(s) | 457 |
| BpuMI | CCSGG | 1 cut(s) | 1458 |
| BsaBI | GATNNNNATC | 1 cut(s) | 549 |
| BsaI | GGTCTC | 1 cut(s) | 616 |
| BsaJI | CCNNGG | 3 cut(s) | 63, 186, 327 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 64, 593 |
| Bse118I | RCCGGY | 1 cut(s) | 214 |
| Bse1I | ACTGG | 2 cut(s) | 452, 1144 |
| Bse3DI | GCAATG | 2 cut(s) | 784, 916 |
| Bse8I | GATNNNNATC | 1 cut(s) | 549 |
| BseBI | CCWGG | 7 cut(s) | 92, 188, 340, 878, 1161, 1395, 1665 |
| BseDI | CCNNGG | 3 cut(s) | 63, 186, 327 |
| BseGI | GGATG | 5 cut(s) | 138, 565, 737, 1183, 1372 |
| BseJI | GATNNNNATC | 1 cut(s) | 549 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 64, 593 |
| BseMI | GCAATG | 2 cut(s) | 784, 916 |
| BseMII | CTCAG | 3 cut(s) | 71, 135, 1557 |
| BseNI | ACTGG | 2 cut(s) | 452, 1144 |
| BseRI | GAGGAG | 2 cut(s) | 83, 86 |
| BseSI | GKGCMC | 1 cut(s) | 1235 |
| BseXI | GCAGC | 9 cut(s) | 33, 63, 587, 692, 794, 826, 854, 989, 1348 |
| BseYI | CCCAGC | 3 cut(s) | 643, 1228, 1405 |
| Bsh1236I | CGCG | 1 cut(s) | 174 |
| Bsh1285I | CGRYCG | 1 cut(s) | 28 |
| BshFI | GGCC | 4 cut(s) | 218, 376, 716, 1172 |
| BshNI | GGYRCC | 1 cut(s) | 1232 |
| BsiEI | CGRYCG | 1 cut(s) | 28 |
| BsiHKAI | GWGCWC | 2 cut(s) | 977, 1542 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1535 |
| BsiSI | CCGG | 2 cut(s) | 215, 1457 |
| BslFI | GGGAC | 1 cut(s) | 515 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 64, 593 |
| BsmAI | GTCTC | 1 cut(s) | 616 |
| BsmFI | GGGAC | 1 cut(s) | 515 |
| BsmI | GAATGC | 1 cut(s) | 881 |
| BsnI | GGCC | 4 cut(s) | 218, 376, 716, 1172 |
| Bso31I | GGTCTC | 1 cut(s) | 616 |
| BsoBI | CYCGRG | 1 cut(s) | 1535 |
| Bsp1286I | GDGCHC | 4 cut(s) | 171, 977, 1235, 1542 |
| BspACI | CCGC | 5 cut(s) | 28, 172, 517, 699, 1364 |
| BspANI | GGCC | 4 cut(s) | 218, 376, 716, 1172 |
| BspCNI | CTCAG | 3 cut(s) | 72, 136, 1556 |
| BspFNI | CGCG | 1 cut(s) | 174 |
| BspHI | TCATGA | 1 cut(s) | 547 |
| BspLI | GGNNCC | 4 cut(s) | 120, 337, 634, 1234 |
| BspMAI | CTGCAG | 4 cut(s) | 605, 710, 844, 1209 |
| BspMI | ACCTGC | 2 cut(s) | 432, 1000 |
| BspPI | GGATC | 7 cut(s) | 113, 126, 416, 557, 627, 640, 1417 |
| BspT107I | GGYRCC | 1 cut(s) | 1232 |
| BspTNI | GGTCTC | 1 cut(s) | 616 |
| BsrDI | GCAATG | 2 cut(s) | 784, 916 |
| BsrFI | RCCGGY | 1 cut(s) | 214 |
| BsrI | ACTGG | 2 cut(s) | 452, 1144 |
| BssAI | RCCGGY | 1 cut(s) | 214 |
| BssECI | CCNNGG | 3 cut(s) | 63, 186, 327 |
| BssSI | CACGAG | 1 cut(s) | 164 |
| BssT1I | CCWWGG | 1 cut(s) | 327 |
| Bst2BI | CACGAG | 1 cut(s) | 164 |
| Bst2UI | CCWGG | 7 cut(s) | 92, 188, 340, 878, 1161, 1395, 1665 |
| Bst4CI | ACNGT | 2 cut(s) | 570, 652 |
| Bst6I | CTCTTC | 4 cut(s) | 398, 1026, 1342, 1534 |
| BstC8I | GCNNGC | 3 cut(s) | 216, 932, 1049 |
| BstDEI | CTNAG | 4 cut(s) | 80, 144, 474, 1543 |
| BstF5I | GGATG | 5 cut(s) | 138, 565, 737, 1183, 1372 |
| BstFNI | CGCG | 1 cut(s) | 174 |
| BstHHI | GCGC | 1 cut(s) | 114 |
| BstMAI | GTCTC | 1 cut(s) | 616 |
| BstMCI | CGRYCG | 1 cut(s) | 28 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 27, 705, 1367 |
| BstNI | CCWGG | 7 cut(s) | 92, 188, 340, 878, 1161, 1395, 1665 |
| BstNSI | RCATGY | 1 cut(s) | 1051 |
| BstSCI | CCNGG | 8 cut(s) | 90, 186, 338, 876, 1159, 1393, 1456, 1663 |
| BstSFI | CTRYAG | 4 cut(s) | 601, 706, 840, 1205 |
| BstSLI | GKGCMC | 1 cut(s) | 1235 |
| BstUI | CGCG | 1 cut(s) | 174 |
| BstV1I | GCAGC | 9 cut(s) | 33, 63, 587, 692, 794, 826, 854, 989, 1348 |
| BstX2I | RGATCY | 4 cut(s) | 118, 408, 632, 1409 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 643, 748 |
| BstYI | RGATCY | 4 cut(s) | 118, 408, 632, 1409 |
| BsuRI | GGCC | 4 cut(s) | 218, 376, 716, 1172 |
| BtgZI | GCGATG | 2 cut(s) | 369, 588 |
| BtsCI | GGATG | 5 cut(s) | 138, 565, 737, 1183, 1372 |
| BtsIMutI | CAGTG | 1 cut(s) | 566 |
| BveI | ACCTGC | 2 cut(s) | 432, 1000 |
| Cac8I | GCNNGC | 3 cut(s) | 216, 932, 1049 |
| CciI | TCATGA | 1 cut(s) | 547 |
| CfoI | GCGC | 1 cut(s) | 114 |
| Cfr10I | RCCGGY | 1 cut(s) | 214 |
| Cfr13I | GGNCC | 1 cut(s) | 375 |
| CsiI | ACCWGGT | 1 cut(s) | 90 |
| Csp6I | GTAC | 1 cut(s) | 1564 |
| CviAII | CATG | 7 cut(s) | 229, 458, 548, 692, 797, 1048, 1472 |
| CviQI | GTAC | 1 cut(s) | 1564 |
| DdeI | CTNAG | 4 cut(s) | 80, 144, 474, 1543 |
| DraI | TTTAAA | 1 cut(s) | 262 |
| Eam1104I | CTCTTC | 4 cut(s) | 398, 1026, 1342, 1534 |
| EarI | CTCTTC | 4 cut(s) | 398, 1026, 1342, 1534 |
| Ecl136II | GAGCTC | 2 cut(s) | 975, 1540 |
| Eco130I | CCWWGG | 1 cut(s) | 327 |
| Eco24I | GRGCYC | 3 cut(s) | 171, 977, 1542 |
| Eco31I | GGTCTC | 1 cut(s) | 616 |
| Eco53kI | GAGCTC | 2 cut(s) | 975, 1540 |
| Eco57I | CTGAAG | 1 cut(s) | 229 |
| Eco88I | CYCGRG | 1 cut(s) | 1535 |
| EcoICRI | GAGCTC | 2 cut(s) | 975, 1540 |
| EcoRII | CCWGG | 7 cut(s) | 90, 186, 338, 876, 1159, 1393, 1663 |
| EcoT14I | CCWWGG | 1 cut(s) | 327 |
| EcoT38I | GRGCYC | 3 cut(s) | 171, 977, 1542 |
| ErhI | CCWWGG | 1 cut(s) | 327 |
| FaeI | CATG | 7 cut(s) | 232, 461, 551, 695, 800, 1051, 1475 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 395, 427, 1036, 1068 |
| FaqI | GGGAC | 1 cut(s) | 515 |
| FatI | CATG | 7 cut(s) | 228, 457, 547, 691, 796, 1047, 1471 |
| FauI | CCCGC | 1 cut(s) | 179 |
| FbaI | TGATCA | 2 cut(s) | 544, 550 |
| FokI | GGATG | 5 cut(s) | 125, 572, 724, 1170, 1379 |
| FriOI | GRGCYC | 3 cut(s) | 171, 977, 1542 |
| GlaI | GCGC | 1 cut(s) | 113 |
| GsaI | CCCAGC | 3 cut(s) | 647, 1232, 1409 |
| HaeIII | GGCC | 4 cut(s) | 218, 376, 716, 1172 |
| HapII | CCGG | 2 cut(s) | 215, 1457 |
| HhaI | GCGC | 1 cut(s) | 114 |
| Hin1II | CATG | 7 cut(s) | 232, 461, 551, 695, 800, 1051, 1475 |
| Hin6I | GCGC | 1 cut(s) | 112 |
| HinP1I | GCGC | 1 cut(s) | 112 |
| HincII | GTYRAC | 1 cut(s) | 989 |
| HindII | GTYRAC | 1 cut(s) | 989 |
| HpaII | CCGG | 2 cut(s) | 215, 1457 |
| HphI | GGTGA | 6 cut(s) | 106, 593, 808, 1048, 1203, 1619 |
| Hpy166II | GTNNAC | 3 cut(s) | 195, 584, 989 |
| Hpy188III | TCNNGA | 7 cut(s) | 122, 412, 548, 1135, 1303, 1376, 1535 |
| Hpy8I | GTNNAC | 3 cut(s) | 195, 584, 989 |
| Hpy99I | CGWCG | 1 cut(s) | 19 |
| HpyAV | CCTTC | 7 cut(s) | 278, 326, 427, 977, 1190, 1200, 1511 |
| HpyCH4III | ACNGT | 2 cut(s) | 570, 652 |
| HpyCH4IV | ACGT | 1 cut(s) | 618 |
| HpyCH4V | TGCA | 5 cut(s) | 603, 708, 842, 1005, 1207 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 27, 705, 1367 |
| HpyF3I | CTNAG | 4 cut(s) | 80, 144, 474, 1543 |
| HpySE526I | ACGT | 1 cut(s) | 618 |
| Hsp92II | CATG | 7 cut(s) | 232, 461, 551, 695, 800, 1051, 1475 |
| HspAI | GCGC | 1 cut(s) | 112 |
| KroI | GCCGGC | 1 cut(s) | 214 |
| KroNI | GCCGGC | 1 cut(s) | 216 |
| Ksp22I | TGATCA | 2 cut(s) | 544, 550 |
| LmnI | GCTCC | 3 cut(s) | 73, 341, 889 |
| Lsp1109I | GCAGC | 9 cut(s) | 33, 63, 587, 692, 794, 826, 854, 989, 1348 |
| LweI | GCATC | 3 cut(s) | 39, 746, 1357 |
| MabI | ACCWGGT | 1 cut(s) | 90 |
| MaeII | ACGT | 1 cut(s) | 618 |
| MaeIII | GTNAC | 3 cut(s) | 1194, 1209, 1571 |
| MflI | RGATCY | 4 cut(s) | 118, 408, 632, 1409 |
| MhlI | GDGCHC | 4 cut(s) | 171, 977, 1235, 1542 |
| MluCI | AATT | 9 cut(s) | 206, 481, 765, 899, 1006, 1071, 1345, 1480, 1485 |
| MlyI | GAGTC | 2 cut(s) | 91, 1520 |
| MmeI | TCCRAC | 1 cut(s) | 639 |
| MroNI | GCCGGC | 1 cut(s) | 214 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1336 |
| MseI | TTAA | 2 cut(s) | 261, 1484 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1251, 1320 |
| MspA1I | CMGCKG | 1 cut(s) | 748 |
| MspI | CCGG | 2 cut(s) | 215, 1457 |
| MspR9I | CCNGG | 8 cut(s) | 92, 188, 340, 878, 1161, 1395, 1458, 1665 |
| Mva1269I | GAATGC | 1 cut(s) | 881 |
| MvaI | CCWGG | 7 cut(s) | 92, 188, 340, 878, 1161, 1395, 1665 |
| MvnI | CGCG | 1 cut(s) | 174 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 27, 705, 1367 |
| NaeI | GCCGGC | 1 cut(s) | 216 |
| NciI | CCSGG | 1 cut(s) | 1458 |
| NgoMIV | GCCGGC | 1 cut(s) | 214 |
| NlaIII | CATG | 7 cut(s) | 232, 461, 551, 695, 800, 1051, 1475 |
| NlaIV | GGNNCC | 4 cut(s) | 120, 337, 634, 1234 |
| NmeAIII | GCCGAG | 1 cut(s) | 352 |
| NmuCI | GTSAC | 2 cut(s) | 1209, 1571 |
| NspI | RCATGY | 1 cut(s) | 1051 |
| PaeI | GCATGC | 1 cut(s) | 1051 |
| PaeR7I | CTCGAG | 1 cut(s) | 1535 |
| PagI | TCATGA | 1 cut(s) | 547 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 171, 1581 |
| PctI | GAATGC | 1 cut(s) | 881 |
| PdiI | GCCGGC | 1 cut(s) | 216 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1336 |
| PfeI | GAWTC | 8 cut(s) | 54, 103, 366, 661, 1016, 1256, 1372, 1415 |
| PfoI | TCCNGGA | 2 cut(s) | 338, 1663 |
| PleI | GAGTC | 2 cut(s) | 90, 1520 |
| PpsI | GAGTC | 2 cut(s) | 90, 1520 |
| Psp124BI | GAGCTC | 2 cut(s) | 977, 1542 |
| Psp1406I | AACGTT | 1 cut(s) | 618 |
| Psp6I | CCWGG | 7 cut(s) | 90, 186, 338, 876, 1159, 1393, 1663 |
| PspFI | CCCAGC | 3 cut(s) | 643, 1228, 1405 |
| PspGI | CCWGG | 7 cut(s) | 90, 186, 338, 876, 1159, 1393, 1663 |
| PspN4I | GGNNCC | 4 cut(s) | 120, 337, 634, 1234 |
| PspPI | GGNCC | 1 cut(s) | 375 |
| PstI | CTGCAG | 4 cut(s) | 605, 710, 844, 1209 |
| PsuI | RGATCY | 4 cut(s) | 118, 408, 632, 1409 |
| PvuII | CAGCTG | 1 cut(s) | 748 |
| RsaI | GTAC | 1 cut(s) | 1565 |
| RsaNI | GTAC | 1 cut(s) | 1564 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1251, 1320 |
| SacI | GAGCTC | 2 cut(s) | 977, 1542 |
| SaqAI | TTAA | 2 cut(s) | 261, 1484 |
| Sau96I | GGNCC | 1 cut(s) | 375 |
| SchI | GAGTC | 2 cut(s) | 91, 1520 |
| ScrFI | CCNGG | 8 cut(s) | 92, 188, 340, 878, 1161, 1395, 1458, 1665 |
| SduI | GDGCHC | 4 cut(s) | 171, 977, 1235, 1542 |
| SexAI | ACCWGGT | 1 cut(s) | 90 |
| SfaNI | GCATC | 3 cut(s) | 39, 746, 1357 |
| SfcI | CTRYAG | 4 cut(s) | 601, 706, 840, 1205 |
| Sfr274I | CTCGAG | 1 cut(s) | 1535 |
| SlaI | CTCGAG | 1 cut(s) | 1535 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1251, 1320 |
| SmlI | CTYRAG | 1 cut(s) | 1535 |
| SmoI | CTYRAG | 1 cut(s) | 1535 |
| SphI | GCATGC | 1 cut(s) | 1051 |
| Sse9I | AATT | 9 cut(s) | 206, 481, 765, 899, 1006, 1071, 1345, 1480, 1485 |
| SsiI | CCGC | 5 cut(s) | 28, 172, 517, 699, 1364 |
| SstI | GAGCTC | 2 cut(s) | 977, 1542 |
| StyD4I | CCNGG | 8 cut(s) | 90, 186, 338, 876, 1159, 1393, 1456, 1663 |
| StyI | CCWWGG | 1 cut(s) | 327 |
| TaaI | ACNGT | 2 cut(s) | 570, 652 |
| TaiI | ACGT | 1 cut(s) | 621 |
| TaqI | TCGA | 5 cut(s) | 129, 828, 971, 981, 1536 |
| TasI | AATT | 9 cut(s) | 206, 481, 765, 899, 1006, 1071, 1345, 1480, 1485 |
| TauI | GCSGC | 1 cut(s) | 519 |
| TfiI | GAWTC | 8 cut(s) | 54, 103, 366, 661, 1016, 1256, 1372, 1415 |
| Tru1I | TTAA | 2 cut(s) | 261, 1484 |
| Tru9I | TTAA | 2 cut(s) | 261, 1484 |
| TscAI | CASTG | 1 cut(s) | 573 |
| TseFI | GTSAC | 2 cut(s) | 1209, 1571 |
| TseI | GCWGC | 9 cut(s) | 21, 76, 600, 705, 807, 839, 842, 1002, 1361 |
| Tsp45I | GTSAC | 2 cut(s) | 1209, 1571 |
| TspGWI | ACGGA | 1 cut(s) | 1590 |
| TspRI | CASTG | 1 cut(s) | 573 |
| XapI | RAATTY | 4 cut(s) | 206, 899, 1071, 1345 |
| XceI | RCATGY | 1 cut(s) | 1051 |
| XhoI | CTCGAG | 1 cut(s) | 1535 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1336 |