Rorug01G0289700
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0002549
Physical Location & Seq
Forward (+)
40506409 .. 40511386
4978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0289700.1

Sequence Viewer

Length: 3264 bp
ATGTGGGAAGATGCCCTGAGATGCCTTGTCAGCTTTGATGAGAAAGACGACTTGACAAAAAAAACTTACTCGGGTCTTGAATGGAGTTACACTCGATTGAATGAGCAGCTTAAGCCATTGTTCTTGTTGTGTGGTACTACCATACAGGGGAACTCTATTTCTTTGACGAACTTATTGAAATATAGTATGGGTTTGGGTTTTTTTAAAGACCTAGCCCTTACAGTTGAAGCAGCTCGAAATGCATTGTACACACAAGTTGATAAACTTAAGAGTTCTTGTCTATTGCTAGACGGAGATGATAATACATGTGTCAGAATGCATGATCTTGTACATGATGTTGCTATCCGGATTGCATCTAAGGATCCACACGTCCTAGTAAAAGATGGAGTTGATCAGTTGAAAGAATGGCCAGACCAAGATTCATTTAAAAGGTGCAGTAAGATCTCCTGGTCCTGTTGCAATATCCCCAGTCTTCCTGAAGTACCTTGGAAATGTCCTGAGCTAGAAATGTTTCTTTTGCATGGTAATGGTAAAGGAAATGATCACCATTCGAAAATTCCAAGCAATTTTTTTGAAGAAATGCCAAAACTCAAGGTGTTGGATATTTGCAATCTGCCTCTTATGTCACTACCTCCATCTCTTGAATTGCTAGAAATCAATCTTCAAACATTGTGTTTAGATGGATGCACGTTGGAAGACATAGCTCGAGTTGGAGAGCTAAGCAACTTGGAAACTCTTAGCTTTGCTAACTCTAAGGTCAAAGAGTTGCCGAAAGAAATAGCGAAATTGACTCATCTGCGGTTGTTGGACTTGTCGGATTGCCCTGAGCTTGAAGTAATTTCACCTAATGTCTTATCAAGTTTGACAAGGCTCGAAGACTTGAGAATGAAAAACAGTTTTGAAAAATGGGAGGCTGAGGGAGACATCAACGAAAGAAAGAATGCTAGTCTTTTGGAGCTGAAGCAGTTATCTGGACTAACTGCATTAGAAATATATATTCCAGATGTTGATATTCTTCCACCAAACTTGTTCTCCAATATGCTGAAAAGATATCATATATATATTGGTGGTGTGTGGAAAATCGGGTTTCCGCGGAAGAAAACTATGGCTGAAACGACCCTCAATACACTAAAGCTCGAGCTCACTCCCAGCAATCAATCGGATCAAGGGCTAAGAAGGCTGATGATGAGATCTGAAGATTTGGCCTTGGATGTGATGGAAGGTGTTAATAATAGTTTGTATCAATTAGACAACGAAGGTTCTCTGCACCTGAAACGTCTCCAACTCCAAAAGAATGTTGATCTTACATATATCATTAACAAGAAGGTTGTGTTCCCCAACTTAACAACCTTGATCATTCAAAAATGTGATCATTTGAGATTCTTGTTCTCATGTTCTATGGCTAAAAGTTTCGTAAAGCTCAAACATCTTGAGATACGCAACTGCAACAGCATGGAAGAGGTAGTATCATCAACAACAGATTACAATGAAGAAAATATGAATAACATGTTCTGTAAGCTTGAAACTCTGGAACTGGAAGAACTTCCATGCCTCGGTAGAATCTGCACAGGTACTCGTATTGAATTTCCGTCCTTGAAGAAGTTGGTTATAAGGTTTTGTTCCAAATTGAAGGCATTCATCTGTGACCCTATGAGTGATAAAAGTACAAGAATCTGCAAAGAAATTGAAGAGAGGGAGTCAGAGGAGAGCCCAAGTGTTGAACATGAGAGTGTTGCAGAACGCTGCCTTTTTAACGACAAGGTAAGATTTCCTAGCTTGGAGAAATTGAAAATCCGTGGCTGCCCCCAGTTGCAGACAATATGGCACAATAACCAACTTGCTGATCAAGACTCTTTTTGCCGACTCAAACATGTTGACGTTAGTTTTTGCCAGAGTCTGATAAGTATATTTCCGCCTAGTATCATGGGGAGATTGAATGCTCTGGAAAGATTAGACATAGGAAGTTGCGGCTCACTAAAAGTGGTATTTGAAATCGGAGGAATTAATGTTGAAGAGACGCGTGTCAACACATCATCCCCTTATGACCAGTTGAAACCTTTGTACTGTCAAAATCTTGAATGCTTGAACATATGGGAAGCTTATAGTTTGAAAAATATATTCCCAGCCTCTTTGGCCAGAGGACTTCAGCAGCTACGAATTCTGAGCGTGATGTCTTGTCTTTGTCTGCTGGAAATAGTTGGTGAGGAAGAGGGAGGAGTAGAATTACCAACGCCTCCTCAGTTTGTGTTCCCAAAGGCAACACGTGTGGCATTGGAAACTCTGCCCAAACTTAAGAGTTTTTATCCGGGAAAGCATACTTCCACGTGGCCATTACTCAAACAATTGAGAGTAAAATTACAAAGGGGAATTTTTTTTGAAAGGGGAATTAATGAGGTAGAAATTTCAATGTTTCAGGATAAACATGAGTCGGGCCCAGTAAAGTCTATCTTTCCAATTGACAAGGATTCATTCCCCAACTTGGAAGAATTGTCCGTGTACAACGTGGATATTTGGTACGGTACATCCCCAGTACCAACAGAGTCGTTCAGCAACCTAAAATATATTAAATTTTATGATTGGGCACCTTTCTCCCAGCAAGCTACATCACTCTTCCTTCATAAATTACACAATATTGAAAGAATTGAAGTGACTGGGGCTCCTCCCGAAGAAATATTTGTCAGTGAAGGAAACAGTAGTTGTGAGGAAATACATGCAGTTGGGACCCTACCAAGCATACGAATTTTAAAGTTTTACTGGTGCAAAATGTTGCATCTAGGGAAGGAGAACTCCGGATCAGGAGGCCCAATTTTTCGAAACTTGGAAGTTCTAGAGGTGACGCATCATTCTCTCGGATTAAAGAATTTGGAATCATCAGCGATTTCCTTCCAGAATTTAACAACTTTGAAAGTAGTTGATTGTCCGGGCTTGGAACATTTAATAACTTATTCAGTGGCTAAAAGCTTAATGCAACTGACAACAATGGAAGTGAATAGATGTCCAAGAATTGCAGTCATAGTGACAACAGACGGTGATGGTGCAGCAGAAGAGATTACTTTCAGCCGATTGCAAGTTTTAACCCTTTGGAGACTGCCAAAAATGCAAGGCTTTTGCTCCGGAAGTTGCATTGTGAATCTCCCATCCTTGACTACTTTATCCATGAGCAACCGCCTTAAATTGAAGATTTTCCAAGGAAAGCTAAAGATAACAAGCAAGCTCTCTGACACGGAGGATGAGGAGGAGAAGACAATGTGGATGAGGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

1087

Amino Acids

123.5

Weight (kDa)

5.91

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 219 - 522 1.8e-07 Leucine-rich repeat region
LRR_RPS2 PF23247 425 - 545 3.9e-16 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 593 - 692 1.4e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 687 - 726 7.5e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 956 - 1056 5.6e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1610
AccB1I GGYRCC 1 cut(s) 2581
AccII CGCG 2 cut(s) 1093, 2020
AccIII TCCGGA 3 cut(s) 345, 2789, 3113
AciI CCGC 6 cut(s) 799, 1091, 1093, 1913, 1968, 3166
AclWI GGATC 4 cut(s) 356, 369, 1170, 2800
AcoI YGGCCR 3 cut(s) 407, 2133, 2327
AcsI RAATTY 9 cut(s) 555, 1583, 2157, 2367, 2400, 2567, 2739, 2860, 2890
AcuI CTGAAG 4 cut(s) 498, 980, 1215, 2129
AcvI CACGTG 2 cut(s) 2264, 2325
AfiI CCNNNNNNNGG 3 cut(s) 147, 1553, 2479
AflII CTTAAG 3 cut(s) 110, 266, 2291
AflIII ACRYGT 7 cut(s) 305, 367, 1506, 1870, 2018, 2261, 2263
AjiI CACGTC 1 cut(s) 370
AjnI CCWGG 1 cut(s) 446
Alw21I GWGCWC 1 cut(s) 1143
Alw26I GTCTC 4 cut(s) 915, 1283, 2009, 3079
AlwI GGATC 4 cut(s) 356, 369, 1170, 2800
AlwNI CAGNNNCTG 1 cut(s) 1897
Ama87I CYCGRG 3 cut(s) 70, 705, 1136
Aor13HI TCCGGA 3 cut(s) 345, 2789, 3113
AoxI GGCC 6 cut(s) 407, 1203, 2133, 2327, 2431, 2800
ApaI GGGCCC 1 cut(s) 2435
ApeKI GCWGC 6 cut(s) 106, 230, 1743, 1800, 2149, 3038
ApoI RAATTY 9 cut(s) 555, 1583, 2157, 2367, 2400, 2567, 2739, 2860, 2890
AseI ATTAAT 2 cut(s) 2004, 2388
Asp700I GAANNNNTTC 4 cut(s) 510, 1542, 1634, 3182
AspS9I GGNCC 5 cut(s) 450, 2431, 2432, 2721, 2801
AsuC2I CCSGG 2 cut(s) 2307, 2922
AsuHPI GGTGA 5 cut(s) 536, 834, 2213, 2845, 3041
AsuII TTCGAA 2 cut(s) 551, 2812
AvaI CYCGRG 3 cut(s) 70, 705, 1136
AvaII GGWCC 2 cut(s) 450, 2721
BaeGI GKGCMC 2 cut(s) 2435, 2584
BalI TGGCCA 3 cut(s) 409, 2135, 2329
BamHI GGATCC 1 cut(s) 361
BanI GGYRCC 1 cut(s) 2581
BanII GRGCYC 4 cut(s) 1143, 1712, 2435, 2659
BbrPI CACGTG 2 cut(s) 2264, 2325
BbsI GAAGAC 4 cut(s) 464, 702, 882, 3248
Bbv12I GWGCWC 1 cut(s) 1143
BbvCI CCTCAGC 1 cut(s) 915
BbvI GCAGC 6 cut(s) 118, 242, 1730, 1787, 2161, 3050
BccI CCATC 6 cut(s) 377, 643, 674, 1210, 3026, 3145
BciT130I CCWGG 1 cut(s) 448
BclI TGATCA 5 cut(s) 391, 541, 1353, 1369, 1843
BcnI CCSGG 2 cut(s) 2307, 2922
BcoDI GTCTC 4 cut(s) 915, 1283, 2009, 3079
BfrI CTTAAG 3 cut(s) 110, 266, 2291
BglI GCCNNNNNGGC 1 cut(s) 2132
BglII AGATCT 2 cut(s) 441, 1190
BisI GCNGC 7 cut(s) 107, 231, 1744, 1801, 1969, 2150, 3039
BlpI GCTNAGC 1 cut(s) 719
BlsI GCNGC 7 cut(s) 108, 232, 1745, 1802, 1970, 2151, 3040
Bme1390I CCNGG 3 cut(s) 448, 2307, 2922
Bme18I GGWCC 2 cut(s) 450, 2721
BmeT110I CYCGRG 3 cut(s) 70, 705, 1136
BmgBI CACGTC 1 cut(s) 370
BmgT120I GGNCC 5 cut(s) 450, 2431, 2432, 2721, 2801
BmiI GGNNCC 6 cut(s) 363, 2433, 2583, 2658, 2722, 2723
BmrFI CCNGG 3 cut(s) 448, 2307, 2922
BmrI ACTGGG 5 cut(s) 462, 1801, 2429, 2522, 2661
BmsI GCATC 5 cut(s) 11, 362, 674, 2779, 2848
BmuI ACTGGG 5 cut(s) 462, 1801, 2429, 2522, 2661
BoxI GACNNNNGTC 1 cut(s) 2021
BpiI GAAGAC 4 cut(s) 464, 702, 882, 3248
BplI GAGNNNNNCTC 2 cut(s) 76, 108
Bpu10I CCTNAGC 3 cut(s) 498, 825, 915
Bpu1102I GCTNAGC 1 cut(s) 719
Bpu14I TTCGAA 2 cut(s) 551, 2812
BpuEI CTTGAG 3 cut(s) 575, 901, 1451
BpuMI CCSGG 2 cut(s) 2307, 2922
BsaAI YACGTR 2 cut(s) 2264, 2325
BsaJI CCNNGG 6 cut(s) 485, 1091, 1206, 1552, 1795, 3187
BsaWI WCCGGW 3 cut(s) 345, 2789, 3113
BsaXI ACNNNNNCTCC 4 cut(s) 1016, 1046, 2641, 2671
Bsc4I CCNNNNNNNGG 3 cut(s) 147, 1553, 2479
Bse1I ACTGG 8 cut(s) 468, 1539, 1807, 2047, 2435, 2528, 2656, 2759
BseAI TCCGGA 3 cut(s) 345, 2789, 3113
BseBI CCWGG 1 cut(s) 448
BseDI CCNNGG 6 cut(s) 485, 1091, 1206, 1552, 1795, 3187
BseGI GGATG 7 cut(s) 689, 1216, 2033, 2522, 3137, 3235, 3258
BseLI CCNNNNNNNGG 3 cut(s) 147, 1553, 2479
BseMII CTCAG 6 cut(s) 8, 489, 816, 906, 2153, 2252
BseNI ACTGG 8 cut(s) 468, 1539, 1807, 2047, 2435, 2528, 2656, 2759
BseRI GAGGAG 6 cut(s) 1718, 2226, 2229, 2649, 3248, 3251
BseSI GKGCMC 2 cut(s) 2435, 2584
BseXI GCAGC 6 cut(s) 118, 242, 1730, 1787, 2161, 3050
BseYI CCCAGC 3 cut(s) 1148, 2122, 2592
BsgI GTGCAG 4 cut(s) 454, 1250, 1549, 3057
Bsh1236I CGCG 2 cut(s) 1093, 2020
BshFI GGCC 6 cut(s) 409, 1205, 2135, 2329, 2433, 2802
BshNI GGYRCC 1 cut(s) 2581
BsiHKAI GWGCWC 1 cut(s) 1143
BsiHKCI CYCGRG 3 cut(s) 70, 705, 1136
BsiSI CCGG 5 cut(s) 346, 2306, 2790, 2921, 3114
BslFI GGGAC 1 cut(s) 2734
BslI CCNNNNNNNGG 3 cut(s) 147, 1553, 2479
BsmAI GTCTC 4 cut(s) 915, 1283, 2009, 3079
BsmBI CGTCTC 2 cut(s) 1283, 2009
BsmFI GGGAC 1 cut(s) 2734
BsmI GAATGC 5 cut(s) 321, 946, 1634, 1942, 2084
BsnI GGCC 6 cut(s) 409, 1205, 2135, 2329, 2433, 2802
BsoBI CYCGRG 3 cut(s) 70, 705, 1136
Bsp119I TTCGAA 2 cut(s) 551, 2812
Bsp120I GGGCCC 1 cut(s) 2431
Bsp1286I GDGCHC 5 cut(s) 1143, 1712, 2435, 2584, 2659
Bsp13I TCCGGA 3 cut(s) 345, 2789, 3113
Bsp1407I TGTACA 3 cut(s) 246, 328, 2496
Bsp1720I GCTNAGC 1 cut(s) 719
BspACI CCGC 6 cut(s) 799, 1091, 1093, 1913, 1968, 3166
BspANI GGCC 6 cut(s) 409, 1205, 2135, 2329, 2433, 2802
BspCNI CTCAG 6 cut(s) 9, 490, 817, 907, 2154, 2251
BspEI TCCGGA 3 cut(s) 345, 2789, 3113
BspFNI CGCG 2 cut(s) 1093, 2020
BspLI GGNNCC 6 cut(s) 363, 2433, 2583, 2658, 2722, 2723
BspPI GGATC 4 cut(s) 356, 369, 1170, 2800
BspT104I TTCGAA 2 cut(s) 551, 2812
BspT107I GGYRCC 1 cut(s) 2581
BspTI CTTAAG 3 cut(s) 110, 266, 2291
BsrGI TGTACA 3 cut(s) 246, 328, 2496
BsrI ACTGG 8 cut(s) 468, 1539, 1807, 2047, 2435, 2528, 2656, 2759
BssECI CCNNGG 6 cut(s) 485, 1091, 1206, 1552, 1795, 3187
BssT1I CCWWGG 3 cut(s) 485, 1206, 3187
Bst2UI CCWGG 1 cut(s) 448
Bst4CI ACNGT 6 cut(s) 223, 896, 2066, 2519, 2693, 3029
Bst6I CTCTTC 6 cut(s) 1452, 1683, 2007, 2202, 2615, 3039
BstAFI CTTAAG 3 cut(s) 110, 266, 2291
BstAUI TGTACA 3 cut(s) 246, 328, 2496
BstBAI YACGTR 2 cut(s) 2264, 2325
BstBI TTCGAA 2 cut(s) 551, 2812
BstC8I GCNNGC 2 cut(s) 2598, 3212
BstDSI CCRYGG 2 cut(s) 1091, 1795
BstF5I GGATG 7 cut(s) 689, 1216, 2033, 2522, 3137, 3235, 3258
BstFNI CGCG 2 cut(s) 1093, 2020
BstMAI GTCTC 4 cut(s) 915, 1283, 2009, 3079
BstMWI GCNNNNNNNGC 6 cut(s) 30, 112, 239, 1177, 2132, 3097
BstNI CCWGG 1 cut(s) 448
BstNSI RCATGY 4 cut(s) 309, 1510, 1874, 2714
BstPAI GACNNNNGTC 1 cut(s) 2021
BstSCI CCNGG 3 cut(s) 446, 2305, 2920
BstSLI GKGCMC 2 cut(s) 2435, 2584
BstUI CGCG 2 cut(s) 1093, 2020
BstV1I GCAGC 6 cut(s) 118, 242, 1730, 1787, 2161, 3050
BstV2I GAAGAC 4 cut(s) 464, 702, 882, 3248
BstX2I RGATCY 3 cut(s) 361, 441, 1190
BstYI RGATCY 3 cut(s) 361, 441, 1190
BsuRI GGCC 6 cut(s) 409, 1205, 2135, 2329, 2433, 2802
BtgI CCRYGG 2 cut(s) 1091, 1795
BtrI CACGTC 1 cut(s) 370
BtsCI GGATG 7 cut(s) 689, 1216, 2033, 2522, 3137, 3235, 3258
BtsIMutI CAGTG 2 cut(s) 2686, 2955
Cac8I GCNNGC 2 cut(s) 2598, 3212
CaiI CAGNNNCTG 1 cut(s) 1897
Cfr13I GGNCC 5 cut(s) 450, 2431, 2432, 2721, 2801
Cfr42I CCGCGG 1 cut(s) 1094
CseI GACGC 2 cut(s) 2026, 2845
CspCI CAANNNNNGTGG 4 cut(s) 1008, 1043, 2247, 2282
DraI TTTAAA 3 cut(s) 205, 427, 2745
EaeI YGGCCR 3 cut(s) 407, 2133, 2327
Eam1104I CTCTTC 6 cut(s) 1452, 1683, 2007, 2202, 2615, 3039
EarI CTCTTC 6 cut(s) 1452, 1683, 2007, 2202, 2615, 3039
EciI GGCGGA 1 cut(s) 1902
Ecl136II GAGCTC 1 cut(s) 1141
Eco130I CCWWGG 3 cut(s) 485, 1206, 3187
Eco24I GRGCYC 4 cut(s) 1143, 1712, 2435, 2659
Eco32I GATATC 1 cut(s) 1052
Eco47I GGWCC 2 cut(s) 450, 2721
Eco53kI GAGCTC 1 cut(s) 1141
Eco57I CTGAAG 4 cut(s) 498, 980, 1215, 2129
Eco72I CACGTG 2 cut(s) 2264, 2325
Eco88I CYCGRG 3 cut(s) 70, 705, 1136
EcoICRI GAGCTC 1 cut(s) 1141
EcoO109I RGGNCCY 1 cut(s) 2721
EcoRI GAATTC 1 cut(s) 2157
EcoRII CCWGG 1 cut(s) 446
EcoRV GATATC 1 cut(s) 1052
EcoT14I CCWWGG 3 cut(s) 485, 1206, 3187
EcoT22I ATGCAT 2 cut(s) 244, 321
EcoT38I GRGCYC 4 cut(s) 1143, 1712, 2435, 2659
ErhI CCWWGG 3 cut(s) 485, 1206, 3187
Esp3I CGTCTC 2 cut(s) 1283, 2009
FalI AAGNNNNNCTT 2 cut(s) 2432, 2464
FaqI GGGAC 1 cut(s) 2734
FauNDI CATATG 1 cut(s) 2090
FbaI TGATCA 5 cut(s) 391, 541, 1353, 1369, 1843
Fnu4HI GCNGC 7 cut(s) 107, 231, 1744, 1801, 1969, 2150, 3039
FokI GGATG 6 cut(s) 696, 1223, 2020, 2509, 3124, 3242
FriOI GRGCYC 4 cut(s) 1143, 1712, 2435, 2659
Fsp4HI GCNGC 7 cut(s) 107, 231, 1744, 1801, 1969, 2150, 3039
GluI GCNGC 7 cut(s) 107, 231, 1744, 1801, 1969, 2150, 3039
GsaI CCCAGC 3 cut(s) 1152, 2126, 2596
HaeIII GGCC 6 cut(s) 409, 1205, 2135, 2329, 2433, 2802
HapII CCGG 5 cut(s) 346, 2306, 2790, 2921, 3114
HgaI GACGC 2 cut(s) 2026, 2845
HincII GTYRAC 2 cut(s) 1876, 2026
HindII GTYRAC 2 cut(s) 1876, 2026
HindIII AAGCTT 3 cut(s) 1517, 2097, 2959
HpaII CCGG 5 cut(s) 346, 2306, 2790, 2921, 3114
HphI GGTGA 5 cut(s) 536, 834, 2213, 2845, 3041
Hpy166II GTNNAC 4 cut(s) 249, 1876, 2026, 2497
Hpy8I GTNNAC 4 cut(s) 249, 1876, 2026, 2497
HpyAV CCTTC 9 cut(s) 1170, 1214, 1250, 1318, 1624, 2624, 2678, 2773, 2893
HpyCH4III ACNGT 6 cut(s) 223, 896, 2066, 2519, 2693, 3029
HpyCH4IV ACGT 7 cut(s) 369, 689, 1276, 1878, 2263, 2324, 2502
HpyF10VI GCNNNNNNNGC 6 cut(s) 30, 112, 239, 1177, 2132, 3097
HpySE526I ACGT 7 cut(s) 369, 689, 1276, 1878, 2263, 2324, 2502
KflI GGGWCCC 1 cut(s) 2721
Kpn2I TCCGGA 3 cut(s) 345, 2789, 3113
Ksp22I TGATCA 5 cut(s) 391, 541, 1353, 1369, 1843
KspI CCGCGG 1 cut(s) 1094
LmnI GCTCC 3 cut(s) 955, 2662, 3116
Lsp1109I GCAGC 6 cut(s) 118, 242, 1730, 1787, 2161, 3050
LweI GCATC 5 cut(s) 11, 362, 674, 2779, 2848
MaeII ACGT 7 cut(s) 369, 689, 1276, 1878, 2263, 2324, 2502
MaeIII GTNAC 6 cut(s) 86, 624, 1643, 2647, 2833, 3016
MfeI CAATTG 2 cut(s) 2342, 2454
MflI RGATCY 3 cut(s) 361, 441, 1190
MhlI GDGCHC 5 cut(s) 1143, 1712, 2435, 2584, 2659
MlsI TGGCCA 3 cut(s) 409, 2135, 2329
MluI ACGCGT 1 cut(s) 2018
MluNI TGGCCA 3 cut(s) 409, 2135, 2329
MlyI GAGTC 7 cut(s) 784, 1706, 1844, 1857, 1903, 2435, 2549
MmeI TCCRAC 6 cut(s) 579, 672, 691, 786, 795, 1306
Mox20I TGGCCA 3 cut(s) 409, 2135, 2329
Mph1103I ATGCAT 2 cut(s) 244, 321
MroI TCCGGA 3 cut(s) 345, 2789, 3113
MroXI GAANNNNTTC 4 cut(s) 510, 1542, 1634, 3182
MscI TGGCCA 3 cut(s) 409, 2135, 2329
MslI CAYNNNNRTG 2 cut(s) 525, 1728
Msp20I TGGCCA 3 cut(s) 409, 2135, 2329
MspA1I CMGCKG 1 cut(s) 1093
MspCI CTTAAG 3 cut(s) 110, 266, 2291
MspI CCGG 5 cut(s) 346, 2306, 2790, 2921, 3114
MspR9I CCNGG 3 cut(s) 448, 2307, 2922
MunI CAATTG 2 cut(s) 2342, 2454
Mva1269I GAATGC 5 cut(s) 321, 946, 1634, 1942, 2084
MvaI CCWGG 1 cut(s) 448
MvnI CGCG 2 cut(s) 1093, 2020
MwoI GCNNNNNNNGC 6 cut(s) 30, 112, 239, 1177, 2132, 3097
NciI CCSGG 2 cut(s) 2307, 2922
NdeI CATATG 1 cut(s) 2090
NlaIV GGNNCC 6 cut(s) 363, 2433, 2583, 2658, 2722, 2723
NmuCI GTSAC 5 cut(s) 624, 1643, 2647, 2833, 3016
NsiI ATGCAT 2 cut(s) 244, 321
NspI RCATGY 4 cut(s) 309, 1510, 1874, 2714
NspV TTCGAA 2 cut(s) 551, 2812
PaeR7I CTCGAG 2 cut(s) 705, 1136
PciI ACATGT 3 cut(s) 305, 1506, 1870
PctI GAATGC 5 cut(s) 321, 946, 1634, 1942, 2084
PdmI GAANNNNTTC 4 cut(s) 510, 1542, 1634, 3182
PfeI GAWTC 7 cut(s) 419, 1380, 1560, 1671, 2465, 2867, 3130
PfoI TCCNGGA 1 cut(s) 2305
PkrI GCNGC 7 cut(s) 108, 232, 1745, 1802, 1970, 2151, 3040
PleI GAGTC 7 cut(s) 784, 1705, 1844, 1857, 1902, 2434, 2548
PmaCI CACGTG 2 cut(s) 2264, 2325
PmlI CACGTG 2 cut(s) 2264, 2325
PpsI GAGTC 7 cut(s) 784, 1705, 1844, 1857, 1902, 2434, 2548
Ppu21I YACGTR 2 cut(s) 2264, 2325
PpuMI RGGWCCY 1 cut(s) 2721
PscI ACATGT 3 cut(s) 305, 1506, 1870
PshAI GACNNNNGTC 1 cut(s) 2021
PshBI ATTAAT 2 cut(s) 2004, 2388
PsiI TTATAA 1 cut(s) 1610
Psp124BI GAGCTC 1 cut(s) 1143
Psp5II RGGWCCY 1 cut(s) 2721
Psp6I CCWGG 1 cut(s) 446
PspCI CACGTG 2 cut(s) 2264, 2325
PspFI CCCAGC 3 cut(s) 1148, 2122, 2592
PspGI CCWGG 1 cut(s) 446
PspN4I GGNNCC 6 cut(s) 363, 2433, 2583, 2658, 2722, 2723
PspOMI GGGCCC 1 cut(s) 2431
PspPI GGNCC 5 cut(s) 450, 2431, 2432, 2721, 2801
PspPPI RGGWCCY 1 cut(s) 2721
PspXI VCTCGAGB 2 cut(s) 705, 1136
PstNI CAGNNNCTG 1 cut(s) 1897
PsuI RGATCY 3 cut(s) 361, 441, 1190
RseI CAYNNNNRTG 2 cut(s) 525, 1728
SacI GAGCTC 1 cut(s) 1143
SacII CCGCGG 1 cut(s) 1094
SatI GCNGC 7 cut(s) 107, 231, 1744, 1801, 1969, 2150, 3039
Sau96I GGNCC 5 cut(s) 450, 2431, 2432, 2721, 2801
SchI GAGTC 7 cut(s) 784, 1706, 1844, 1857, 1903, 2435, 2549
ScrFI CCNGG 3 cut(s) 448, 2307, 2922
SduI GDGCHC 5 cut(s) 1143, 1712, 2435, 2584, 2659
SfaNI GCATC 5 cut(s) 11, 362, 674, 2779, 2848
Sfr274I CTCGAG 2 cut(s) 705, 1136
Sfr303I CCGCGG 1 cut(s) 1094
SfuI TTCGAA 2 cut(s) 551, 2812
SgrBI CCGCGG 1 cut(s) 1094
SinI GGWCC 2 cut(s) 450, 2721
SlaI CTCGAG 2 cut(s) 705, 1136
SmiMI CAYNNNNRTG 2 cut(s) 525, 1728
SmlI CTYRAG 8 cut(s) 110, 266, 590, 705, 880, 1136, 1430, 2291
SmoI CTYRAG 8 cut(s) 110, 266, 590, 705, 880, 1136, 1430, 2291
SsiI CCGC 6 cut(s) 799, 1091, 1093, 1913, 1968, 3166
SspI AATATT 2 cut(s) 2632, 2673
SstI GAGCTC 1 cut(s) 1143
StyD4I CCNGG 3 cut(s) 446, 2305, 2920
StyI CCWWGG 3 cut(s) 485, 1206, 3187
TaaI ACNGT 6 cut(s) 223, 896, 2066, 2519, 2693, 3029
TaiI ACGT 7 cut(s) 372, 692, 1279, 1881, 2266, 2327, 2505
TaqI TCGA 7 cut(s) 94, 235, 551, 706, 873, 1137, 2812
TatI WGTACW 5 cut(s) 246, 328, 1664, 2061, 2496
TauI GCSGC 1 cut(s) 1971
TfiI GAWTC 7 cut(s) 419, 1380, 1560, 1671, 2465, 2867, 3130
TscAI CASTG 2 cut(s) 2686, 2955
TseFI GTSAC 5 cut(s) 624, 1643, 2647, 2833, 3016
TseI GCWGC 6 cut(s) 106, 230, 1743, 1800, 2149, 3038
Tsp45I GTSAC 5 cut(s) 624, 1643, 2647, 2833, 3016
TspDTI ATGAA 7 cut(s) 411, 902, 1503, 1514, 1627, 2457, 2606
TspGWI ACGGA 5 cut(s) 306, 1578, 1784, 2482, 3239
TspRI CASTG 2 cut(s) 2686, 2955
Vha464I CTTAAG 3 cut(s) 110, 266, 2291
VpaK11BI GGWCC 2 cut(s) 450, 2721
VspI ATTAAT 2 cut(s) 2004, 2388
XapI RAATTY 9 cut(s) 555, 1583, 2157, 2367, 2400, 2567, 2739, 2860, 2890
XbaI TCTAGA 1 cut(s) 2827
XceI RCATGY 4 cut(s) 309, 1510, 1874, 2714
XhoI CTCGAG 2 cut(s) 705, 1136
XmnI GAANNNNTTC 4 cut(s) 510, 1542, 1634, 3182
Zsp2I ATGCAT 2 cut(s) 244, 321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.